View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0493_low_24 (Length: 442)
Name: NF0493_low_24
Description: NF0493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0493_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 102 - 431
Target Start/End: Complemental strand, 25520981 - 25520652
Alignment:
| Q |
102 |
agatagaaggtttattctatggtattcttatgaaatatacaaaaaagatgttttatattgcttaaacggtttttatacaaaaataatttgtaacaattgc |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25520981 |
agatagaaggtttattctatggtattcttatgaaatatacaaaaaagatgttttatattgcttaaacggtttttatacaaaaataatttgtaacaattgc |
25520882 |
T |
|
| Q |
202 |
ctcgggtgtttaagaagcaatttccttacatatatccatcccactcatccgttacatatccctcatttgagtaaaaactatcacacaaagaccnnnnnnn |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25520881 |
ctcgggtgtttaagaagcaatttccttacatatatccatcccactcatccgttacatatccctcatttgagtaaaaactatcacacaaagaccttttctt |
25520782 |
T |
|
| Q |
302 |
nnnnnnnnnnnnnnnnnnggttacctctcaagctatctctttctaagtctaagctctcacatcctcttttccaaaaaatctctccgtctcttacattcag |
401 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25520781 |
tctatttatttcttttttggttacctctcaagctatctctttctaagtctaagctctcacatcctcttttccaaaaaatctctccgtctcttacattcag |
25520682 |
T |
|
| Q |
402 |
tagaatcaaaactatcaactatccctctct |
431 |
Q |
| |
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|||||||||||||||||||||||||||||| |
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| T |
25520681 |
tagaatcaaaactatcaactatccctctct |
25520652 |
T |
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