View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0493_low_66 (Length: 319)
Name: NF0493_low_66
Description: NF0493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0493_low_66 |
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Alignment Details
Target: chr8 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 33827821 - 33827656
Alignment:
| Q |
57 |
aatatgacgtatttcaattcatacagtcaactccacttagtggaataatgattgggggttgttatcggtgccatatggtaataatgggctctaacgttat |
156 |
Q |
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| T |
33827821 |
aatatgacgtatttcgattcatacagtcaactccacttagtggaataatgattgggtgttgttatcggtgccatatggtaataatgggctctaacgttat |
33827722 |
T |
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| Q |
157 |
ctcgtgttggttttgcggttgttttgcggattccaattcccatttgcttttaagctgtgattttcc |
222 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
33827721 |
ctcgtgttggttttgcggttgttttgtcgattccaattcccatttgcttttaagctgtgattttcc |
33827656 |
T |
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