View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0493_low_77 (Length: 296)

Name: NF0493_low_77
Description: NF0493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0493_low_77
NF0493_low_77
[»] chr7 (23 HSPs)
chr7 (157-227)||(2832267-2832337)
chr7 (159-231)||(39267684-39267756)
chr7 (1-91)||(9751386-9751476)
chr7 (157-227)||(9751542-9751612)
chr7 (8-91)||(39267489-39267572)
chr7 (8-91)||(2832148-2832231)
chr7 (28-91)||(18302373-18302436)
chr7 (157-227)||(18425651-18425721)
chr7 (157-227)||(18425853-18425923)
chr7 (157-227)||(18302217-18302287)
chr7 (157-227)||(18426053-18426123)
chr7 (165-227)||(45169837-45169899)
chr7 (7-90)||(2279959-2280042)
chr7 (157-210)||(39267638-39267691)
chr7 (1-90)||(2529889-2529977)
chr7 (187-216)||(9320503-9320532)
chr7 (187-216)||(11085048-11085077)
chr7 (187-216)||(11092786-11092815)
chr7 (187-216)||(15213748-15213777)
chr7 (187-216)||(30821030-30821059)
chr7 (187-216)||(38480286-38480315)
chr7 (7-91)||(12255632-12255716)
chr7 (31-91)||(35366420-35366480)
[»] chr4 (32 HSPs)
chr4 (1-91)||(20157126-20157216)
chr4 (1-91)||(24028936-24029026)
chr4 (8-91)||(13812652-13812735)
chr4 (157-227)||(13812801-13812871)
chr4 (157-227)||(22634205-22634275)
chr4 (1-89)||(22634049-22634137)
chr4 (157-227)||(630766-630836)
chr4 (1-91)||(3332080-3332170)
chr4 (165-227)||(15868709-15868771)
chr4 (158-227)||(32851433-32851502)
chr4 (157-219)||(20157282-20157344)
chr4 (157-212)||(3331959-3332014)
chr4 (165-227)||(10713066-10713128)
chr4 (165-227)||(10926836-10926898)
chr4 (165-227)||(12487924-12487986)
chr4 (157-227)||(15225097-15225167)
chr4 (157-227)||(15225291-15225361)
chr4 (157-210)||(14953953-14954006)
chr4 (157-210)||(25690137-25690190)
chr4 (32-90)||(16223729-16223787)
chr4 (1-91)||(32851570-32851660)
chr4 (7-91)||(15868551-15868635)
chr4 (7-90)||(52243034-52243117)
chr4 (32-90)||(15371399-15371457)
chr4 (32-90)||(15373680-15373738)
chr4 (32-90)||(44102407-44102465)
chr4 (9-90)||(15464773-15464854)
chr4 (187-216)||(15880746-15880775)
chr4 (187-216)||(33186151-33186180)
chr4 (34-90)||(15367887-15367943)
chr4 (34-90)||(15370214-15370270)
chr4 (34-90)||(15402900-15402956)
[»] chr3 (31 HSPs)
chr3 (1-91)||(14668955-14669045)
chr3 (157-227)||(4588782-4588852)
chr3 (158-231)||(45797221-45797294)
chr3 (157-227)||(12852360-12852430)
chr3 (157-227)||(14665664-14665734)
chr3 (1-91)||(14665800-14665890)
chr3 (157-227)||(14735177-14735247)
chr3 (1-91)||(14735313-14735403)
chr3 (158-227)||(14501181-14501250)
chr3 (1-91)||(4588624-4588714)
chr3 (157-227)||(14668819-14668889)
chr3 (157-227)||(16750015-16750085)
chr3 (157-227)||(16750411-16750481)
chr3 (157-227)||(19775981-19776051)
chr3 (157-227)||(37439459-37439529)
chr3 (23-91)||(12852222-12852290)
chr3 (165-227)||(4107228-4107290)
chr3 (165-227)||(4111080-4111142)
chr3 (157-227)||(8489288-8489358)
chr3 (1-91)||(14501318-14501408)
chr3 (165-227)||(15965185-15965247)
chr3 (165-227)||(15969109-15969171)
chr3 (165-227)||(15973033-15973095)
chr3 (157-227)||(16749817-16749887)
chr3 (157-227)||(16750213-16750283)
chr3 (1-91)||(45797362-45797452)
chr3 (157-227)||(23413242-23413312)
chr3 (23-89)||(23413107-23413174)
chr3 (32-90)||(24340588-24340646)
chr3 (187-216)||(31224728-31224757)
chr3 (187-216)||(31415453-31415482)
[»] chr5 (14 HSPs)
chr5 (157-232)||(21871563-21871638)
chr5 (157-232)||(21875843-21875918)
chr5 (8-91)||(24767180-24767263)
chr5 (157-227)||(22120187-22120257)
chr5 (157-227)||(24767329-24767399)
chr5 (23-91)||(21871429-21871497)
chr5 (23-91)||(21875709-21875777)
chr5 (157-227)||(10753577-10753647)
chr5 (1-89)||(22120029-22120119)
chr5 (187-217)||(36460218-36460248)
chr5 (187-216)||(12122295-12122324)
chr5 (187-216)||(21555153-21555182)
chr5 (187-216)||(21557819-21557848)
chr5 (7-91)||(22144246-22144330)
[»] scaffold0221 (2 HSPs)
scaffold0221 (157-227)||(12800-12870)
scaffold0221 (13-91)||(12656-12734)
[»] scaffold0192 (2 HSPs)
scaffold0192 (1-91)||(10105-10195)
scaffold0192 (157-232)||(9910-9985)
[»] chr6 (16 HSPs)
chr6 (9-91)||(27325278-27325360)
chr6 (157-227)||(27325426-27325496)
chr6 (157-227)||(31477633-31477703)
chr6 (157-227)||(16624345-16624415)
chr6 (165-227)||(16760508-16760570)
chr6 (157-210)||(22949375-22949428)
chr6 (157-210)||(22953331-22953384)
chr6 (157-210)||(23871819-23871872)
chr6 (157-210)||(23875775-23875828)
chr6 (8-91)||(21939577-21939661)
chr6 (157-227)||(16624543-16624613)
chr6 (7-90)||(25644519-25644602)
chr6 (187-217)||(34297043-34297073)
chr6 (187-216)||(2201168-2201197)
chr6 (187-216)||(20734221-20734250)
chr6 (187-216)||(22421016-22421045)
[»] scaffold0166 (2 HSPs)
scaffold0166 (8-91)||(9677-9760)
scaffold0166 (157-227)||(9826-9896)
[»] scaffold0124 (3 HSPs)
scaffold0124 (157-227)||(24646-24716)
scaffold0124 (23-91)||(24509-24577)
scaffold0124 (165-227)||(21892-21954)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-87)||(8130-8216)
scaffold0075 (158-232)||(8287-8361)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-91)||(207355-207445)
scaffold0016 (157-227)||(207511-207581)
[»] scaffold0261 (1 HSPs)
scaffold0261 (165-227)||(18337-18399)
[»] scaffold0080 (1 HSPs)
scaffold0080 (157-227)||(48977-49047)
[»] scaffold0037 (2 HSPs)
scaffold0037 (1-91)||(80168-80258)
scaffold0037 (160-227)||(80347-80414)
[»] chr8 (11 HSPs)
chr8 (157-227)||(18862468-18862538)
chr8 (157-227)||(21387290-21387360)
chr8 (157-227)||(21411163-21411233)
chr8 (157-227)||(21805655-21805725)
chr8 (157-227)||(21827837-21827907)
chr8 (165-227)||(21383870-21383932)
chr8 (32-90)||(17611978-17612036)
chr8 (187-216)||(32807314-32807343)
chr8 (187-216)||(41680896-41680925)
chr8 (187-216)||(42560301-42560330)
chr8 (187-215)||(29763642-29763670)
[»] chr2 (3 HSPs)
chr2 (157-227)||(1283640-1283710)
chr2 (157-227)||(30344814-30344884)
chr2 (7-90)||(23708459-23708542)
[»] chr1 (9 HSPs)
chr1 (157-227)||(1924952-1925022)
chr1 (157-227)||(20923966-20924036)
chr1 (157-227)||(41388069-41388139)
chr1 (157-227)||(39243964-39244034)
chr1 (157-227)||(39247519-39247589)
chr1 (157-226)||(41387871-41387940)
chr1 (7-90)||(16758848-16758931)
chr1 (7-91)||(35260921-35261005)
chr1 (188-216)||(12328630-12328658)
[»] scaffold0235 (2 HSPs)
scaffold0235 (158-227)||(13621-13690)
scaffold0235 (1-91)||(13758-13848)
[»] scaffold0415 (1 HSPs)
scaffold0415 (165-227)||(610-672)
[»] scaffold0229 (1 HSPs)
scaffold0229 (165-227)||(11332-11394)
[»] scaffold0157 (1 HSPs)
scaffold0157 (165-227)||(32491-32553)
[»] scaffold0142 (1 HSPs)
scaffold0142 (165-227)||(7648-7710)
[»] scaffold0031 (1 HSPs)
scaffold0031 (165-227)||(35917-35979)
[»] scaffold0012 (2 HSPs)
scaffold0012 (165-227)||(189208-189270)
scaffold0012 (7-90)||(225604-225687)
[»] scaffold0347 (2 HSPs)
scaffold0347 (1-55)||(259-313)
scaffold0347 (157-206)||(1-50)
[»] scaffold0141 (1 HSPs)
scaffold0141 (165-227)||(13918-13980)
[»] scaffold0357 (2 HSPs)
scaffold0357 (7-90)||(13327-13410)
scaffold0357 (7-90)||(15940-16023)
[»] scaffold0010 (1 HSPs)
scaffold0010 (8-90)||(60556-60638)
[»] scaffold0737 (1 HSPs)
scaffold0737 (187-216)||(6452-6481)
[»] scaffold0247 (1 HSPs)
scaffold0247 (33-90)||(17893-17950)


Alignment Details
Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 2832267 - 2832337
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  2832267 tttgatgattgaaatgttgatgacatgcatttgtagttgttatatatgatgattattattattgaatgatg 2832337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 39267684 - 39267756
Alignment:
Q  159 tgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatgatgt 231  Q
    ||||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39267684 tgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattattattattgaatgatgatgt 39267756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9751386 - 9751476
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||| |||||| ||||||||    
T  9751386 taaatgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatatatgatattaatgatgatttgtgaagt 9751476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 9751542 - 9751612
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  9751542 tttgatgattgaaatgttgatgacgtgcatttgtagttgttatatatgatgattattattattgaatgatg 9751612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 39267489 - 39267572
Alignment:
Q  8 gatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    |||||||||| ||| |||| ||||||||||||||||| ||||||||||| |||||| || |||||||| |||||||||||||||    
T  39267489 gatctttgtcgcacgagttgttatgagttgaaccttgtgatagtaatgaggaatatatatgatattaatgatgatctgtgaagt 39267572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 2832148 - 2832231
Alignment:
Q  8 gatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    |||| ||||| ||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||| |||||| ||||||||    
T  2832148 gatccttgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatatatgatattaatgatgatttgtgaagt 2832231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 18302436 - 18302373
Alignment:
Q  28 ttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||    
T  18302436 ttatgagttgaaccttgggatagtaatgaggaatatgtatgatattaatgacgatctgtgaagt 18302373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 18425721 - 18425651
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  18425721 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 18425651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 18425923 - 18425853
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  18425923 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 18425853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 18302287 - 18302217
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||||||  ||| |||||||||||  ||||||||||||||| |||||||||||||||||||| ||||||||    
T  18302287 tttgatgaatgagatgttgatgacgtgcatttgtaattgttgtatatgatgattattattatcgaatgatg 18302217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 18426123 - 18426053
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| || | |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  18426123 tttgatgattaagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 18426053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 45169837 - 45169899
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  45169837 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 45169899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 2279959 - 2280042
Alignment:
Q  7 cgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||||||| |||| ||  ||||||||||||||| | |||||||||| ||| || ||||| || ||||||||||||||    
T  2279959 cgatctttgtcacacgagttgttgagagttgaaccttggggtcgtaatgaagattatttatgatatcaatgatgatctgtgaag 2280042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 39267638 - 39267691
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgatt 210  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||||||||||    
T  39267638 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgatt 39267691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 2529889 - 2529977
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||| ||||||||||| ||| |||| |||||||||||  ||| |||||| |||||||||||| ||  ||||||  ||||||||||||||    
T  2529889 taaatgcgatctttgtcgcacgagttgttatgagttgagtctttggatag-aatgaagaatatatataatattactgatgatctgtgaag 2529977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Original strand, 9320503 - 9320532
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  9320503 ttgtaattgttatatatgatgattattatt 9320532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 11085077 - 11085048
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  11085077 ttgtaattgttatatatgatgattattatt 11085048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 11092815 - 11092786
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  11092815 ttgtaattgttatatatgatgattattatt 11092786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 15213777 - 15213748
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  15213777 ttgtaattgttatatatgatgattattatt 15213748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Original strand, 30821030 - 30821059
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  30821030 ttgtaattgttatatatgatgattattatt 30821059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 38480315 - 38480286
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  38480315 ttgtaattgttatatatgatgattattatt 38480286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 12255632 - 12255716
Alignment:
Q  7 cgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||||||||||||| |||| ||  ||||||||  ||||| |||||||||||| | | ||  ||||||| |||||||| ||||||    
T  12255632 cgatctttgtcacacgagttgttgagagttgaattttggggtagtaatgaagattgtataatatattaatgatgatctatgaagt 12255716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 35366480 - 35366420
Alignment:
Q  31 tgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    |||||||||| ||||||||| ||||||  || | || |||||||| |||||||||||||||    
T  35366480 tgagttgaactttgggatagcaatgaaagatgtataggatattaatgatgatctgtgaagt 35366420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20157126 - 20157216
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||| |||||||||||||||    
T  20157126 taaatgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatatatgatattaatgatgatctgtgaagt 20157216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24029026 - 24028936
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||| |||||||||||||||    
T  24029026 taaatgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatatatgatattaatgatgatctgtgaagt 24028936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 13812652 - 13812735
Alignment:
Q  8 gatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||| |||||||||||||||    
T  13812652 gatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatatatgatattaatgatgatctgtgaagt 13812735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 13812801 - 13812871
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  13812801 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattattattattgaatgatg 13812871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 22634205 - 22634275
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  22634205 tttgatgattgaaatgttgatgacgtgcatttgtagttgttatatatgatgattattattattgaatgatg 22634275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22634049 - 22634137
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaa 89  Q
    ||||| ||||||||||| ||| | || ||||||||||||||||||||||||||||| |||||| || |||||||| |||||||||||||    
T  22634049 taaatgcgatctttgtcgcacgatttgttatgagttgaaccttgggatagtaatgaggaatatatatgatattaatgatgatctgtgaa 22634137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 630766 - 630836
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  630766 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattattattatcgaatgatg 630836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3332170 - 3332080
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||||||||||| ||  |||| |||| |||||||||||||||||||||||| |||||| || |||||||| |||||||||||||||    
T  3332170 taaatgcgatctttgtcgcatgagttgttattagttgaaccttgggatagtaatgaggaatatatatgatattaatgatgatctgtgaagt 3332080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 15868709 - 15868771
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  15868709 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattattattattgaatgatg 15868771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 32851502 - 32851433
Alignment:
Q  158 ttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||||| |||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  32851502 ttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattcttattattgaatgatg 32851433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 20157282 - 20157344
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattatt 219  Q
    ||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  20157282 tttgatgattgaaatgttgatgacgtgcatttgtagttgttatatatgatgattattattatt 20157344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 3332014 - 3331959
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattat 212  Q
    ||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  3332014 tttgatgattgagatgttgatgacatgcatttgtaattgttatatatgatgattat 3331959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 10713128 - 10713066
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  10713128 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 10713066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 10926898 - 10926836
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  10926898 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 10926836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 12487986 - 12487924
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  12487986 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 12487924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 15225167 - 15225097
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||  |||||||| |||||    
T  15225167 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattaccattattgattgatg 15225097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 15225361 - 15225291
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| || | |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  15225361 tttgatgattaagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 15225291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 14953953 - 14954006
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgatt 210  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||||||||||    
T  14953953 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgatt 14954006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 25690190 - 25690137
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgatt 210  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||||||||||    
T  25690190 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgatt 25690137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 16223787 - 16223729
Alignment:
Q  32 gagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||||||| |||| ||||| | ||| ||||||||||| ||||||||||||||    
T  16223787 gagttgaaccttggggtagttatgaatattatttacgatattaatgatgatctgtgaag 16223729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 32851660 - 32851570
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||||||||||| |   |||| ||||||||||||||| ||||||||||||| ||||||||  ||| |||  || ||||||||||||    
T  32851660 taaatgcgatctttgtcgcgtgagttgttatgagttgaacctggggatagtaatgaggaatatgtttgatgttagtgacgatctgtgaagt 32851570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 15868551 - 15868635
Alignment:
Q  7 cgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||||||||| | | |||| ||||||||||||||  |||||||||||||  |||||||| ||| |||  || ||||||||||||    
T  15868551 cgatctttgtcgcgcgagttgttatgagttgaacccggggatagtaatgagaaatatgtatgatgttagtgacgatctgtgaagt 15868635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 52243034 - 52243117
Alignment:
Q  7 cgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||| ||| |||  | | ||||||||| ||||| |||||||||||| | | || |||||||| ||||||||||||||    
T  52243034 cgatctttgtcgcacgagtcgtaaagagttgaactttggggtagtaatgaagattgtataagatattaatgatgatctgtgaag 52243117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 15371457 - 15371399
Alignment:
Q  32 gagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||||||| |||| ||||| | ||| ||| ||||||| ||||||||||||||    
T  15371457 gagttgaaccttggggtagttatgaatattatttacaatattaatgatgatctgtgaag 15371399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 15373738 - 15373680
Alignment:
Q  32 gagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||||||| |||| ||||| | ||| ||| ||||||| ||||||||||||||    
T  15373738 gagttgaaccttggggtagttatgaatattatttacaatattaatgatgatctgtgaag 15373680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 44102465 - 44102407
Alignment:
Q  32 gagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    |||||||||||||||||||| ||||| | ||| ||  ||||||| ||||||||||||||    
T  44102465 gagttgaaccttgggatagttatgaatattatatataatattaatgatgatctgtgaag 44102407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 15464773 - 15464854
Alignment:
Q  9 atctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||| ||| |||| ||||||||||||||||||  |||||||||  | | | || |||||||| |||||| |||||||    
T  15464773 atctttgtcgcacaagttgttatgagttgaaccttggagtagtaatgagaattgtatatgatattaatgatgatttgtgaag 15464854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 15880775 - 15880746
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  15880775 ttgtaattgttatatatgatgattattatt 15880746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 33186180 - 33186151
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  33186180 ttgtaattgttatatatgatgattattatt 33186151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 15367943 - 15367887
Alignment:
Q  34 gttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||||| |||| ||||| | ||| ||| ||||||| ||||||||||||||    
T  15367943 gttgaaccttggggtagttatgaatattatttacaatattaatgatgatctgtgaag 15367887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 15370270 - 15370214
Alignment:
Q  34 gttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||||| |||| ||||| | ||| ||| ||||||| ||||||||||||||    
T  15370270 gttgaaccttggggtagttatgaatattatttacaatattaatgatgatctgtgaag 15370214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 15402956 - 15402900
Alignment:
Q  34 gttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||||| |||| ||||| | ||| ||| ||||||| ||||||||||||||    
T  15402956 gttgaaccttggggtagttatgaatattatttacaatattaatgatgatctgtgaag 15402900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 5e-25; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14669045 - 14668955
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||| |||||| ||||||||    
T  14669045 taaattcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatatatgatattaatgatgatttgtgaagt 14668955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 4588782 - 4588852
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  4588782 tttgatgattgaaatgttgatgacgtgcatttgtagttgttatatatgatgattattattattgaatgatg 4588852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 45797294 - 45797221
Alignment:
Q  158 ttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatgatgt 231  Q
    |||||| |||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45797294 ttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattcttattattgaatgatgatgt 45797221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 12852360 - 12852430
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  12852360 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattattattatcgaatgatg 12852430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 14665734 - 14665664
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| ||||||||||||||||  || |||||| |||||||||||||||||||||||||||||||||||    
T  14665734 tttgatgattgaaatgttgatgacgtgcgtttgtagttgttatatatgatgattattattattgaatgatg 14665664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14665890 - 14665800
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||||||||||| ||| |||| ||||||||||||||||| ||||||||||| |||||| || |||||||| |||||| ||||||||    
T  14665890 taaatgcgatctttgtcgcacgagttgttatgagttgaaccttgtgatagtaatgaggaatatatatgatattaatgatgatttgtgaagt 14665800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 14735247 - 14735177
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| ||||||||||||||||  || |||||| |||||||||||||||||||||||||||||||||||    
T  14735247 tttgatgattgaaatgttgatgacgtgcgtttgtagttgttatatatgatgattattattattgaatgatg 14735177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14735403 - 14735313
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||||||||||| ||| |||| ||||||||||||||||| ||||||||||| |||||| || |||||||| |||||| ||||||||    
T  14735403 taaatgcgatctttgtcgcacgagttgttatgagttgaaccttgtgatagtaatgaggaatatatatgatattaatgatgatttgtgaagt 14735313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 14501250 - 14501181
Alignment:
Q  158 ttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||||| |||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  14501250 ttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattcttattattgaatgatg 14501181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4588624 - 4588714
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||| ||||||| ||| |||| ||||||||||||||||||||||||||||| ||||||  | |||||||| |||||| ||||||||    
T  4588624 taaatgcgagctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatacatgatattaatgatgatttgtgaagt 4588714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 14668889 - 14668819
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| ||||||||||||||||  || ||| || |||||||||||||||||||||||||||||||||||    
T  14668889 tttgatgattgaaatgttgatgacgtgcgtttatagttgttatatatgatgattattattattgaatgatg 14668819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 16750015 - 16750085
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  16750015 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 16750085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 16750411 - 16750481
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  16750411 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 16750481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 19776051 - 19775981
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  19776051 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 19775981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 37439459 - 37439529
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  37439459 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 37439529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 12852222 - 12852290
Alignment:
Q  23 agtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||| |||||||| || ||||||||||||    
T  12852222 agttgttatgagtttaaccttgggatagtaatgaggaatatgtatgatattaatgacgatctgtgaagt 12852290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 4107228 - 4107290
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  4107228 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 4107290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 4111080 - 4111142
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  4111080 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 4111142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 8489288 - 8489358
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  | |||||||||||||||||||||||||||| |||||||| |||||    
T  8489288 tttgatgattgagatgttgatgacgtgtatttgtaattgttatatatgatgattatcattattgattgatg 8489358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14501408 - 14501318
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||||||||||||| | |||| ||||||||||||||| ||||||||||||| ||||||||  ||| |||  || ||||||||||||    
T  14501408 taaatgcgatctttgtcacgcgagttgttatgagttgaacctggggatagtaatgaggaatatgtttgatgttagtgacgatctgtgaagt 14501318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 15965247 - 15965185
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  15965247 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 15965185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 15969171 - 15969109
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  15969171 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 15969109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 15973095 - 15973033
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  15973095 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 15973033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 16749817 - 16749887
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| || | |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  16749817 tttgatgattaagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 16749887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 16750213 - 16750283
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| || | |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  16750213 tttgatgattaagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 16750283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 45797452 - 45797362
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||||||||||| | | |||| ||||||||||||||| ||||||||||||| ||||||||  ||| |||  || ||||||||||||    
T  45797452 taaatgcgatctttgtcgcgcgagttgttatgagttgaacctggggatagtaatgaggaatatgtttgatgttagtgacgatctgtgaagt 45797362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 23413242 - 23413312
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||| |||||||||||||||| ||| |||||| ||| ||||||||    
T  23413242 tttgatgattgagatgttgatgacgtgcatgtgtaattgttatatataatgcttattaatatcgaatgatg 23413312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 23413107 - 23413174
Alignment:
Q  23 agtttttatgagttgaaccttgggat-agtaatgaagaatatgtacgatattaacgatgatctgtgaa 89  Q
    |||| |||||||||||||||| |||| ||||||||  |||||||| |||||||| |||||||| ||||    
T  23413107 agttgttatgagttgaacctttggataagtaatgagaaatatgtaggatattaatgatgatctatgaa 23413174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 24340588 - 24340646
Alignment:
Q  32 gagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||||||| |||| ||||| | ||| ||| ||||||| ||||||||||||||    
T  24340588 gagttgaaccttggggtagttatgaatattatttacaatattaatgatgatctgtgaag 24340646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Original strand, 31224728 - 31224757
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  31224728 ttgtaattgttatatatgatgattattatt 31224757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 31415482 - 31415453
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  31415482 ttgtaattgttatatatgatgattattatt 31415453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 21871563 - 21871638
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatgatgtc 232  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21871563 tttgatgcttgagatgttgatgacgtgcatttgtaattgttatatatgatgattattattattgaatgatgctgtc 21871638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 21875843 - 21875918
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatgatgtc 232  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21875843 tttgatgcttgagatgttgatgacgtgcatttgtaattgttatatatgatgattattattattgaatgatgctgtc 21875918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 24767180 - 24767263
Alignment:
Q  8 gatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||| |||||| ||||||||    
T  24767180 gatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatatatgatattaatgatgatttgtgaagt 24767263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 22120187 - 22120257
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  22120187 tttgatgattgagatgttgatgacgttcatttgtaattgttatatatgatgattattattattgaatgatg 22120257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 24767329 - 24767399
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| ||||||||||||||||  |||||| || |||||||||||||||||||||||||||||||||||    
T  24767329 tttgatgattgaaatgttgatgacgtgcatttatagttgttatatatgatgattattattattgaatgatg 24767399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 21871429 - 21871497
Alignment:
Q  23 agtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| |||||||| |||||| ||||||||    
T  21871429 agttgttatgagttgaaccttgggatagtaatgaggaatatgtatgatattaatgatgatatgtgaagt 21871497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 21875709 - 21875777
Alignment:
Q  23 agtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| |||||||| |||||| ||||||||    
T  21875709 agttgttatgagttgaaccttgggatagtaatgaggaatatgtatgatattaatgatgatatgtgaagt 21875777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 10753647 - 10753577
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  10753647 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 10753577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22120029 - 22120119
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaaga--atatgtacgatattaacgatgatctgtgaa 89  Q
    ||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||| ||  |||| || |||||||| |||||| ||||||    
T  22120029 taaatgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatatatatgatattaatgatgatatgtgaa 22120119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 217
Target Start/End: Complemental strand, 36460248 - 36460218
Alignment:
Q  187 ttgtaattgttatatatgatgattattatta 217  Q
    |||||||||||||||||||||||||||||||    
T  36460248 ttgtaattgttatatatgatgattattatta 36460218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Original strand, 12122295 - 12122324
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  12122295 ttgtaattgttatatatgatgattattatt 12122324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Original strand, 21555153 - 21555182
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  21555153 ttgtaattgttatatatgatgattattatt 21555182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Original strand, 21557819 - 21557848
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  21557819 ttgtaattgttatatatgatgattattatt 21557848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 22144330 - 22144246
Alignment:
Q  7 cgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||||||||| ||| |||| ||  ||||||||||||||  | |||||||||| | | || |||||||| ||||| |||||||||    
T  22144330 cgatctttgtcgcacgagttgttgagagttgaaccttggagtcgtaatgaagattgtttatgatattaatgatgacctgtgaagt 22144246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 12800 - 12870
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  12800 tttgatgattgaaatgttgatgacgtgcatttgtagttgttatatatgatgattattattattgaatgatg 12870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 12656 - 12734
Alignment:
Q  13 ttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||| |||| |||||||||||||||| |||||||||||| |||||| || |||||||| |||||||||||||||    
T  12656 ttgtcgcacgagttgttatgagttgaaccttaggatagtaatgaggaatatatatgatattaatgatgatctgtgaagt 12734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 10195 - 10105
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| |||||||||||  || |||| ||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||||||    
T  10195 taaatgcgatctttgtcgtacgagttgttatgagttgaaccttgggatagtaatgaggaatatgtatgatattaatggtgatctgtgaagt 10105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 9985 - 9910
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatgatgtc 232  Q
    |||||||  ||| |||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9985 tttgatgagtgagatgttggtgacgtgcatttgtaattgttatatatgatgattattattattgaatgatgctgtc 9910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 27325278 - 27325360
Alignment:
Q  9 atctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||| |||||||||||||||    
T  27325278 atctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatataagatattaatgatgatctgtgaagt 27325360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 27325426 - 27325496
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||| |||||||    
T  27325426 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattaaatgatg 27325496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 31477633 - 31477703
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  31477633 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 31477703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 16624415 - 16624345
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||| ||||| |||||||| |||||    
T  16624415 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgataattatcattattgattgatg 16624345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 16760570 - 16760508
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  16760570 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 16760508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 22949428 - 22949375
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgatt 210  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||||||||||    
T  22949428 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgatt 22949375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 22953384 - 22953331
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgatt 210  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||||||||||    
T  22953384 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgatt 22953331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 23871872 - 23871819
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgatt 210  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||||||||||    
T  23871872 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgatt 23871819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 23875828 - 23875775
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgatt 210  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||||||||||    
T  23875828 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgatt 23875775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 21939661 - 21939577
Alignment:
Q  8 gatctttgtcacactagtttttatgagttgaaccttgggatagtaa-tgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    |||| ||||| ||| |||| ||||||||||||||||||| |||||| ||| |||||| || |||||||| |||||| ||||||||    
T  21939661 gatccttgtcgcacgagttgttatgagttgaaccttgggttagtaattgaggaatatatatgatattaatgatgatttgtgaagt 21939577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 16624613 - 16624543
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| || | |||||||||||  |||||| ||||||||||||||||| ||||| |||||||| |||||    
T  16624613 tttgatgattaagatgttgatgacgtgcatttataattgttatatatgataattatcattattgattgatg 16624543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 25644602 - 25644519
Alignment:
Q  7 cgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||| ||| ||||  |  ||||||||||||||| |||| || |||| ||| || |||||||| ||||||||||||||    
T  25644602 cgatctttgtcgcacgagttgctgagagttgaaccttggggtagttataaagattatatatgatattaatgatgatctgtgaag 25644519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 217
Target Start/End: Original strand, 34297043 - 34297073
Alignment:
Q  187 ttgtaattgttatatatgatgattattatta 217  Q
    |||||||||||||||||||||||||||||||    
T  34297043 ttgtaattgttatatatgatgattattatta 34297073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 2201197 - 2201168
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  2201197 ttgtaattgttatatatgatgattattatt 2201168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Original strand, 20734221 - 20734250
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  20734221 ttgtaattgttatatatgatgattattatt 20734250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 22421045 - 22421016
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  22421045 ttgtaattgttatatatgatgattattatt 22421016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 9677 - 9760
Alignment:
Q  8 gatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||| |||||| ||||||||    
T  9677 gatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatatatgatattaatgatgatttgtgaagt 9760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 9826 - 9896
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| ||||||||||||||||  |||||| || |||||||||||||||||||||||||||||||||||    
T  9826 tttgatgattgaaatgttgatgacgtgcatttatagttgttatatatgatgattattattattgaatgatg 9896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 24646 - 24716
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  24646 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattattattatcgaatgatg 24716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 24509 - 24577
Alignment:
Q  23 agtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||    
T  24509 agttgttatgagttgaaccttgggatagtaatgaggaatatgtatgatattaatgacgatctgtgaagt 24577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 21892 - 21954
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||| ||||||  |||||||||||||||||||||||||||||| ||||| || |||||    
T  21892 ttgagatgtagatgacgtgcatttgtaattgttatatatgatgattatcattatcgattgatg 21954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 8130 - 8216
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtg 87  Q
    ||||| ||||||||||| ||| ||||  |||| ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  8130 taaatgcgatctttgtcgcacgagttgatatgggttgaaccttgggatagtaatgaggaatatgtatgatattaatgatgatctgtg 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 8287 - 8361
Alignment:
Q  158 ttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatgatgtc 232  Q
    |||||| |||| |||||||||||  |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  8287 ttgatgattgagatgttgatgacgtgcatttgtaattgttatataggatgattattattattgaatgatgctgtc 8361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 207355 - 207445
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||||  | |||||||| |||||| ||||||||    
T  207355 taaatgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatacatgatattaatgatgatttgtgaagt 207445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 207511 - 207581
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| ||||||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||    
T  207511 tttgatgattgaaatgttgatgacgtgcatttgtagttgttatatatgatgattactattattgaatgatg 207581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 18337 - 18399
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  18337 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattcttattattgaatgatg 18399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 48977 - 49047
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  48977 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 49047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 80168 - 80258
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||||||| ||| ||| |||| ||||||||||||||||||||||||||||| ||||||  | |||||||| |||||| ||||||||    
T  80168 taaatgcgatcttcgtcgcacgagttgttatgagttgaaccttgggatagtaatgaggaatatacatgatattaatgatgatttgtgaagt 80258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 80347 - 80414
Alignment:
Q  160 gatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| ||||||| ||||||||  ||||||||| |||||||||||||||||||||| ||||||||||||    
T  80347 gatgattgaaatattgatgacgtgcatttgtagttgttatatatgatgattattaatattgaatgatg 80414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 7e-18; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 18862468 - 18862538
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  18862468 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 18862538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 21387360 - 21387290
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  21387360 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 21387290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 21411233 - 21411163
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  21411233 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 21411163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 21805725 - 21805655
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  21805725 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 21805655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 21827837 - 21827907
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  21827837 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 21827907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 21383932 - 21383870
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  21383932 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 21383870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 17611978 - 17612036
Alignment:
Q  32 gagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||||||| |||| ||||| | ||| ||| ||||||| ||||||||||||||    
T  17611978 gagttgaaccttggggtagttatgaatattatttacaatattaatgatgatctgtgaag 17612036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 32807343 - 32807314
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  32807343 ttgtaattgttatatatgatgattattatt 32807314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Original strand, 41680896 - 41680925
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  41680896 ttgtaattgttatatatgatgattattatt 41680925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Original strand, 42560301 - 42560330
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  42560301 ttgtaattgttatatatgatgattattatt 42560330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 215
Target Start/End: Original strand, 29763642 - 29763670
Alignment:
Q  187 ttgtaattgttatatatgatgattattat 215  Q
    |||||||||||||||||||||||||||||    
T  29763642 ttgtaattgttatatatgatgattattat 29763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 1283710 - 1283640
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  1283710 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 1283640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 30344814 - 30344884
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  30344814 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 30344884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 23708459 - 23708542
Alignment:
Q  7 cgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||| ||| |||| ||   |||||||||||||| | |||||||||| | | || |||||||| ||||||||||||||    
T  23708459 cgatctttgtcgcacgagttgttgatagttgaaccttggggtcgtaatgaagattgtttatgatattaatgatgatctgtgaag 23708542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 1924952 - 1925022
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  1924952 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 1925022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 20923966 - 20924036
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  20923966 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 20924036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 41388069 - 41388139
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  41388069 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 41388139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 39243964 - 39244034
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||| ||||| |||||||| |||||    
T  39243964 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgataattatcattattgattgatg 39244034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 39247519 - 39247589
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    ||||||| |||| |||||||||||  |||||||||||||||||||||||| ||||| |||||||| |||||    
T  39247519 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgataattatcattattgattgatg 39247589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 41387871 - 41387940
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgat 226  Q
    ||||||| || | |||||||||||  |||||||||||||||||||||||||||||| |||||||| ||||    
T  41387871 tttgatgattaagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgat 41387940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 16758931 - 16758848
Alignment:
Q  7 cgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||| ||| |||| ||  ||||||||||||||| | |||||||||| | | || |||||||| ||||||||||||||    
T  16758931 cgatctttgtcgcacgagttgttgagagttgaaccttggggtcgtaatgaagattgtttatgatattaatgatgatctgtgaag 16758848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 35260921 - 35261005
Alignment:
Q  7 cgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||||||||| ||| || | ||||||||||||| ||||| |||||||| ||| | | || |||||||||||| || ||||||||    
T  35260921 cgatctttgtcgcacgagatgttatgagttgaacattggggtagtaatggagattgtatatgatattaacgataatatgtgaagt 35261005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 12328630 - 12328658
Alignment:
Q  188 tgtaattgttatatatgatgattattatt 216  Q
    |||||||||||||||||||||||||||||    
T  12328630 tgtaattgttatatatgatgattattatt 12328658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 13690 - 13621
Alignment:
Q  158 ttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||||| |||| |||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||    
T  13690 ttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgatgattcttattactgaatgatg 13621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13848 - 13758
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaagt 91  Q
    ||||| ||||||||||| | | |||| ||||||||||||||| ||| ||||||||| ||||||||  ||| |||  |||||||||||||||    
T  13848 taaatgcgatctttgtcgcgcgagttgttatgagttgaacctggggttagtaatgaggaatatgtttgatgttagtgatgatctgtgaagt 13758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Complemental strand, 672 - 610
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  672 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 11332 - 11394
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  11332 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 11394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 32491 - 32553
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  32491 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 32553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 7648 - 7710
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| ||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||    
T  7648 ttgagatgttgatgatgtgcatttgtaattgttatatatgatgattattattatcgaatgatg 7710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 35917 - 35979
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  35917 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 35979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 189208 - 189270
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||| |||||||| |||||    
T  189208 ttgagatgttgatgacgtgcatttgtaattgttatatatgatgattatcattattgattgatg 189270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 225687 - 225604
Alignment:
Q  7 cgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||| ||| |||| ||  ||||||||||||||| |||| ||||||| ||| || ||||||||  |||| ||||||||    
T  225687 cgatctttgtcgcacgagttgttgagagttgaaccttggggtagttatgaagattatatatgatattaataatgaactgtgaag 225604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 313 - 259
Alignment:
Q  1 taaattcgatctttgtcacactagtttttatgagttgaaccttgggatagtaatg 55  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  313 taaatgcgatctttgtcgcacgagtttttatgagttgaaccttgggataggaatg 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 50 - 1
Alignment:
Q  157 tttgatggttgaaatgttgatgacaagcatttgtaattgttatatatgat 206  Q
    ||||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  50 tttgatgattgagatgttgatgacgtgcatttgtaattgttatatatgat 1  T

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Target: scaffold0141 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 13918 - 13980
Alignment:
Q  165 ttgaaatgttgatgacaagcatttgtaattgttatatatgatgattattattattgaatgatg 227  Q
    |||| ||||||||||   |||||||||||||||||||||||||||||| |||||||| |||||    
T  13918 ttgagatgttgatgaagtgcatttgtaattgttatatatgatgattatcattattgattgatg 13980  T

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Target: scaffold0357 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 13410 - 13327
Alignment:
Q  7 cgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||| ||| |||| ||||||||| ||||||||| |||||||| | | | | || ||||| || ||||||||||||||    
T  13410 cgatctttgtcgcacgagttgttatgagttaaaccttggggtagtaatggaaattgtatatgatatcaatgatgatctgtgaag 13327  T

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Target: scaffold0357; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 15940 - 16023
Alignment:
Q  7 cgatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    ||||||||||| ||| |||| |||||||||||||||| || |||||||| | | | | || ||||| || ||||||||||||||    
T  15940 cgatctttgtcgcacaagttgttatgagttgaacctttgggtagtaatggaaattgtatatgatatcaatgatgatctgtgaag 16023  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 60556 - 60638
Alignment:
Q  8 gatctttgtcacactagtttttatgagttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    |||||||||| ||| || | ||||||||||||||||||| ||| |||| ||| | | || |||||||| ||| ||||||||||    
T  60556 gatctttgtcgcacgagatgttatgagttgaaccttggggtaggaatggagattgtatatgatattaatgataatctgtgaag 60638  T

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Target: scaffold0737 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Original strand, 6452 - 6481
Alignment:
Q  187 ttgtaattgttatatatgatgattattatt 216  Q
    ||||||||||||||||||||||||||||||    
T  6452 ttgtaattgttatatatgatgattattatt 6481  T

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Target: scaffold0247 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 17893 - 17950
Alignment:
Q  33 agttgaaccttgggatagtaatgaagaatatgtacgatattaacgatgatctgtgaag 90  Q
    |||||||||||||| |||| ||||| | ||| ||| ||||||| ||||||||||||||    
T  17893 agttgaaccttggggtagttatgaatattatttacaatattaatgatgatctgtgaag 17950  T

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