View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0494_low_8 (Length: 252)

Name: NF0494_low_8
Description: NF0494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0494_low_8
NF0494_low_8
[»] chr1 (48 HSPs)
chr1 (22-134)||(24783100-24783212)
chr1 (40-134)||(36819308-36819403)
chr1 (49-131)||(1010744-1010826)
chr1 (42-134)||(16080444-16080536)
chr1 (49-131)||(20228812-20228894)
chr1 (49-131)||(16375461-16375543)
chr1 (49-131)||(21407376-21407458)
chr1 (49-131)||(52639562-52639644)
chr1 (25-103)||(18182159-18182237)
chr1 (43-134)||(19211883-19211972)
chr1 (22-85)||(21313122-21313185)
chr1 (40-134)||(33797295-33797386)
chr1 (25-95)||(3472969-3473039)
chr1 (43-134)||(20138099-20138188)
chr1 (25-108)||(22449299-22449382)
chr1 (25-101)||(17678626-17678702)
chr1 (47-101)||(3705105-3705159)
chr1 (25-103)||(21788081-21788159)
chr1 (48-95)||(18394012-18394059)
chr1 (49-100)||(33050067-33050118)
chr1 (48-95)||(45310415-45310462)
chr1 (190-244)||(16080334-16080388)
chr1 (53-134)||(18882393-18882472)
chr1 (25-95)||(21022631-21022701)
chr1 (49-134)||(23819300-23819383)
chr1 (25-82)||(6151848-6151905)
chr1 (22-103)||(22468735-22468816)
chr1 (25-82)||(22831446-22831503)
chr1 (44-127)||(12646888-12646969)
chr1 (40-96)||(20229267-20229323)
chr1 (22-101)||(20135188-20135267)
chr1 (48-95)||(45489790-45489837)
chr1 (190-248)||(24782986-24783044)
chr1 (206-244)||(33797711-33797749)
chr1 (190-244)||(36819198-36819252)
chr1 (49-120)||(1925145-1925214)
chr1 (49-120)||(20924159-20924228)
chr1 (40-88)||(39244187-39244235)
chr1 (40-88)||(39247742-39247790)
chr1 (40-88)||(41388287-41388335)
chr1 (25-84)||(20091534-20091593)
chr1 (25-84)||(42865271-42865330)
chr1 (47-101)||(8761674-8761728)
chr1 (48-102)||(21714569-21714623)
chr1 (21-74)||(13212974-13213027)
chr1 (54-95)||(46975494-46975535)
chr1 (18-74)||(21342090-21342146)
chr1 (48-84)||(27250787-27250823)
[»] scaffold0036 (2 HSPs)
scaffold0036 (22-134)||(66415-66527)
scaffold0036 (190-244)||(66305-66359)
[»] scaffold0031 (4 HSPs)
scaffold0031 (22-134)||(53559-53671)
scaffold0031 (190-244)||(53727-53781)
scaffold0031 (49-102)||(65838-65891)
scaffold0031 (49-120)||(36102-36171)
[»] chr7 (80 HSPs)
chr7 (22-134)||(11312642-11312754)
chr7 (38-133)||(12318137-12318232)
chr7 (38-130)||(15580701-15580793)
chr7 (40-134)||(13635469-13635563)
chr7 (40-132)||(16583268-16583360)
chr7 (49-131)||(70768-70850)
chr7 (49-131)||(74877-74959)
chr7 (49-131)||(26292416-26292498)
chr7 (49-131)||(39722287-39722369)
chr7 (42-134)||(15605272-15605365)
chr7 (49-131)||(12714885-12714967)
chr7 (49-131)||(12718689-12718771)
chr7 (49-131)||(16114262-16114344)
chr7 (49-131)||(16117415-16117497)
chr7 (49-131)||(16907204-16907286)
chr7 (49-131)||(18283387-18283469)
chr7 (43-134)||(9593361-9593450)
chr7 (22-101)||(2832482-2832561)
chr7 (49-131)||(33128-33210)
chr7 (49-131)||(12704662-12704744)
chr7 (49-131)||(18279424-18279506)
chr7 (41-126)||(11987225-11987308)
chr7 (49-131)||(12723600-12723682)
chr7 (43-127)||(19066-19148)
chr7 (25-102)||(9751794-9751871)
chr7 (40-134)||(13918781-13918872)
chr7 (25-102)||(14429883-14429960)
chr7 (43-134)||(7519359-7519447)
chr7 (40-134)||(1859087-1859178)
chr7 (44-134)||(16457358-16457446)
chr7 (25-103)||(12321780-12321858)
chr7 (22-79)||(14152048-14152105)
chr7 (40-134)||(2530391-2530484)
chr7 (40-99)||(25927536-25927595)
chr7 (25-103)||(3271823-3271901)
chr7 (25-91)||(39267950-39268016)
chr7 (40-99)||(16275504-16275563)
chr7 (47-101)||(2760153-2760207)
chr7 (40-98)||(35151618-35151676)
chr7 (25-101)||(19649530-19649606)
chr7 (40-134)||(13149167-13149259)
chr7 (48-95)||(42204017-42204064)
chr7 (40-98)||(8917439-8917497)
chr7 (47-101)||(9446199-9446253)
chr7 (190-244)||(11312810-11312864)
chr7 (40-98)||(14216927-14216985)
chr7 (190-248)||(15580853-15580911)
chr7 (40-98)||(15728337-15728395)
chr7 (40-98)||(16724665-16724723)
chr7 (40-98)||(17701679-17701737)
chr7 (40-120)||(18425450-18425528)
chr7 (51-98)||(18556996-18557043)
chr7 (190-244)||(12318289-12318343)
chr7 (40-98)||(13461773-13461831)
chr7 (190-244)||(15605162-15605216)
chr7 (190-244)||(16583417-16583471)
chr7 (44-127)||(6801229-6801310)
chr7 (25-101)||(17138101-17138177)
chr7 (49-120)||(45170022-45170091)
chr7 (206-237)||(2530040-2530071)
chr7 (25-84)||(12187019-12187078)
chr7 (198-241)||(14430063-14430106)
chr7 (25-84)||(14932792-14932851)
chr7 (25-84)||(15356227-15356286)
chr7 (25-84)||(15360341-15360400)
chr7 (48-95)||(20569643-20569690)
chr7 (190-244)||(13635359-13635413)
chr7 (21-79)||(18430709-18430767)
chr7 (38-84)||(24054477-24054523)
chr7 (21-74)||(67745-67798)
chr7 (190-247)||(16438921-16438978)
chr7 (21-74)||(28505366-28505419)
chr7 (21-74)||(47831807-47831860)
chr7 (196-244)||(9593513-9593561)
chr7 (196-244)||(9644476-9644524)
chr7 (25-84)||(9703263-9703322)
chr7 (48-84)||(15211484-15211520)
chr7 (24-84)||(18456470-18456530)
chr7 (25-84)||(32216606-32216665)
chr7 (48-84)||(38227508-38227544)
[»] chr6 (73 HSPs)
chr6 (22-134)||(17804191-17804303)
chr6 (22-134)||(25767168-25767280)
chr6 (42-134)||(22430030-22430122)
chr6 (49-130)||(22862967-22863048)
chr6 (49-131)||(1644726-1644808)
chr6 (49-131)||(8243882-8243964)
chr6 (49-131)||(11566883-11566965)
chr6 (49-131)||(14472292-14472373)
chr6 (49-131)||(19870611-19870693)
chr6 (49-131)||(23395089-23395171)
chr6 (49-133)||(18955764-18955848)
chr6 (22-102)||(27325650-27325730)
chr6 (49-131)||(18917269-18917351)
chr6 (49-131)||(23989941-23990023)
chr6 (43-134)||(12706705-12706794)
chr6 (25-100)||(16523425-16523500)
chr6 (40-134)||(23414658-23414749)
chr6 (40-134)||(27556416-27556507)
chr6 (25-103)||(18907111-18907189)
chr6 (49-129)||(12618850-12618929)
chr6 (40-134)||(5616816-5616908)
chr6 (25-101)||(15894479-15894555)
chr6 (43-134)||(16741222-16741311)
chr6 (25-101)||(18180494-18180570)
chr6 (23-103)||(19848034-19848114)
chr6 (25-101)||(20908022-20908098)
chr6 (40-99)||(1644300-1644359)
chr6 (48-95)||(19790826-19790873)
chr6 (40-99)||(31478265-31478324)
chr6 (25-103)||(15041589-15041667)
chr6 (47-101)||(27553612-27553666)
chr6 (25-102)||(19873120-19873197)
chr6 (44-127)||(2685326-2685407)
chr6 (44-127)||(19662787-19662868)
chr6 (25-101)||(21766695-21766771)
chr6 (23-103)||(23992429-23992509)
chr6 (25-84)||(19862978-19863037)
chr6 (40-98)||(1587766-1587824)
chr6 (190-244)||(17804359-17804413)
chr6 (42-88)||(27416232-27416278)
chr6 (50-95)||(23657468-23657513)
chr6 (47-95)||(27567656-27567704)
chr6 (40-134)||(9482294-9482386)
chr6 (52-95)||(12496333-12496376)
chr6 (40-99)||(21702300-21702359)
chr6 (190-245)||(22429919-22429974)
chr6 (25-84)||(22432249-22432308)
chr6 (25-84)||(22438799-22438858)
chr6 (40-98)||(20803589-20803647)
chr6 (190-244)||(25767058-25767112)
chr6 (206-244)||(27415832-27415870)
chr6 (40-120)||(16624144-16624222)
chr6 (47-100)||(22408345-22408398)
chr6 (25-102)||(25642227-25642304)
chr6 (49-120)||(31477826-31477895)
chr6 (21-84)||(17287854-17287917)
chr6 (25-84)||(22334955-22335014)
chr6 (190-244)||(12706851-12706905)
chr6 (190-252)||(16741368-16741430)
chr6 (25-79)||(21740094-21740148)
chr6 (21-79)||(25714417-25714475)
chr6 (24-85)||(1595549-1595610)
chr6 (21-74)||(19303608-19303661)
chr6 (21-74)||(27333286-27333339)
chr6 (21-74)||(27394026-27394079)
chr6 (22-79)||(34963371-34963428)
chr6 (49-120)||(16760316-16760385)
chr6 (47-103)||(22074251-22074307)
chr6 (49-120)||(22949129-22949198)
chr6 (49-120)||(22953085-22953154)
chr6 (49-120)||(23871573-23871642)
chr6 (49-120)||(23875529-23875598)
chr6 (24-84)||(25656629-25656689)
[»] chr3 (84 HSPs)
chr3 (22-134)||(2897823-2897935)
chr3 (22-134)||(20461500-20461612)
chr3 (22-134)||(7793349-7793462)
chr3 (40-134)||(15482675-15482769)
chr3 (22-134)||(327164-327277)
chr3 (49-131)||(30065970-30066052)
chr3 (49-131)||(11070092-11070174)
chr3 (49-131)||(11165532-11165614)
chr3 (49-127)||(15617398-15617476)
chr3 (40-134)||(31097555-31097649)
chr3 (49-131)||(55022891-55022973)
chr3 (22-102)||(14668554-14668634)
chr3 (49-131)||(7109722-7109804)
chr3 (49-131)||(7113657-7113739)
chr3 (49-131)||(14499349-14499431)
chr3 (49-131)||(22336743-22336825)
chr3 (49-131)||(27409647-27409729)
chr3 (49-131)||(28949748-28949830)
chr3 (49-134)||(11854757-11854842)
chr3 (22-102)||(14665398-14665478)
chr3 (49-131)||(22321688-22321770)
chr3 (25-101)||(12172796-12172872)
chr3 (25-101)||(18383956-18384032)
chr3 (40-134)||(8489473-8489564)
chr3 (40-134)||(15464878-15464969)
chr3 (48-103)||(19725949-19726004)
chr3 (25-94)||(11862793-11862862)
chr3 (40-123)||(15850095-15850176)
chr3 (40-134)||(5223077-5223168)
chr3 (40-133)||(11854430-11854520)
chr3 (25-103)||(12496257-12496335)
chr3 (25-101)||(12037993-12038068)
chr3 (29-101)||(23053128-23053200)
chr3 (48-95)||(3403003-3403050)
chr3 (25-95)||(322592-322662)
chr3 (47-101)||(1982851-1982905)
chr3 (25-101)||(11298568-11298644)
chr3 (25-101)||(11851581-11851657)
chr3 (48-95)||(3389983-3390030)
chr3 (40-99)||(4589228-4589287)
chr3 (40-134)||(12339479-12339570)
chr3 (40-99)||(19775360-19775419)
chr3 (190-252)||(2897705-2897767)
chr3 (44-134)||(11300767-11300854)
chr3 (23-101)||(46822267-46822345)
chr3 (48-101)||(12511084-12511137)
chr3 (49-101)||(11557425-11557477)
chr3 (25-101)||(15878092-15878168)
chr3 (44-127)||(17241990-17242071)
chr3 (25-101)||(23077518-23077594)
chr3 (48-95)||(11595186-11595233)
chr3 (25-84)||(14878574-14878633)
chr3 (40-99)||(16696798-16696857)
chr3 (40-134)||(16798055-16798147)
chr3 (190-244)||(327054-327108)
chr3 (190-244)||(7793239-7793293)
chr3 (190-244)||(15482825-15482879)
chr3 (190-244)||(20461390-20461444)
chr3 (40-120)||(16750604-16750682)
chr3 (25-101)||(856140-856216)
chr3 (52-127)||(15941912-15941985)
chr3 (25-73)||(26196500-26196548)
chr3 (48-103)||(30029867-30029922)
chr3 (190-244)||(31097444-31097499)
chr3 (48-95)||(42325964-42326011)
chr3 (25-103)||(23408428-23408506)
chr3 (52-127)||(1598487-1598560)
chr3 (48-101)||(15051531-15051584)
chr3 (48-101)||(15060307-15060360)
chr3 (48-101)||(16909765-16909818)
chr3 (49-120)||(4107413-4107482)
chr3 (49-120)||(4111265-4111334)
chr3 (49-120)||(15964993-15965062)
chr3 (49-120)||(15968917-15968986)
chr3 (49-120)||(15972841-15972910)
chr3 (48-84)||(17525216-17525252)
chr3 (49-120)||(19775789-19775858)
chr3 (52-95)||(3833699-3833742)
chr3 (24-79)||(16454388-16454443)
chr3 (21-84)||(23083419-23083482)
chr3 (52-95)||(38814409-38814452)
chr3 (48-101)||(16369423-16369476)
chr3 (24-84)||(24153266-24153326)
chr3 (49-120)||(37439652-37439721)
[»] chr2 (47 HSPs)
chr2 (22-134)||(24735397-24735509)
chr2 (49-131)||(10101648-10101730)
chr2 (49-131)||(24649378-24649460)
chr2 (49-131)||(12901515-12901597)
chr2 (49-131)||(27379436-27379518)
chr2 (49-131)||(27383482-27383564)
chr2 (49-131)||(27601817-27601899)
chr2 (49-131)||(24628482-24628564)
chr2 (25-101)||(22811952-22812028)
chr2 (40-134)||(31344890-31344981)
chr2 (47-101)||(37524697-37524751)
chr2 (48-101)||(25961575-25961628)
chr2 (25-101)||(22799167-22799243)
chr2 (25-101)||(24716569-24716645)
chr2 (47-95)||(24869902-24869950)
chr2 (25-108)||(25963749-25963832)
chr2 (40-99)||(41666962-41667021)
chr2 (25-95)||(21916145-21916215)
chr2 (47-101)||(24174822-24174876)
chr2 (25-95)||(24673569-24673639)
chr2 (47-95)||(21318683-21318731)
chr2 (47-95)||(21327614-21327662)
chr2 (44-127)||(22461196-22461277)
chr2 (25-101)||(23019747-23019823)
chr2 (48-103)||(25616212-25616267)
chr2 (190-244)||(19688646-19688700)
chr2 (47-101)||(24655379-24655433)
chr2 (190-244)||(24735565-24735619)
chr2 (40-98)||(27263285-27263343)
chr2 (52-127)||(18855468-18855541)
chr2 (25-101)||(40622251-40622327)
chr2 (52-134)||(19928503-19928583)
chr2 (28-95)||(24680191-24680258)
chr2 (48-95)||(40428486-40428533)
chr2 (40-98)||(60829-60886)
chr2 (25-102)||(22741004-22741081)
chr2 (25-82)||(45678189-45678246)
chr2 (49-120)||(30345007-30345076)
chr2 (49-120)||(41531020-41531089)
chr2 (48-102)||(23038054-23038108)
chr2 (40-98)||(23187088-23187146)
chr2 (40-98)||(23598351-23598409)
chr2 (25-102)||(22758759-22758836)
chr2 (49-120)||(1283410-1283479)
chr2 (24-84)||(22105412-22105472)
chr2 (21-85)||(23040246-23040310)
chr2 (220-252)||(24716412-24716444)
[»] chr4 (56 HSPs)
chr4 (22-131)||(36133965-36134074)
chr4 (40-134)||(22634422-22634516)
chr4 (49-131)||(9556551-9556633)
chr4 (49-131)||(17810293-17810375)
chr4 (49-131)||(4561337-4561419)
chr4 (49-131)||(14757425-14757507)
chr4 (43-134)||(1951762-1951851)
chr4 (49-133)||(27534047-27534131)
chr4 (43-127)||(18222386-18222468)
chr4 (49-131)||(5756941-5757023)
chr4 (25-95)||(16488124-16488194)
chr4 (22-100)||(20157501-20157579)
chr4 (49-129)||(33742399-33742478)
chr4 (40-134)||(43256414-43256505)
chr4 (25-91)||(13813069-13813135)
chr4 (43-120)||(17152501-17152576)
chr4 (43-127)||(18228861-18228943)
chr4 (25-101)||(12570014-12570090)
chr4 (25-108)||(16348697-16348780)
chr4 (25-108)||(16356985-16357068)
chr4 (40-98)||(3412811-3412869)
chr4 (40-98)||(18236904-18236962)
chr4 (40-100)||(28569477-28569537)
chr4 (40-99)||(14708668-14708727)
chr4 (52-134)||(26243666-26243746)
chr4 (190-244)||(36133852-36133906)
chr4 (52-127)||(23139296-23139369)
chr4 (40-99)||(15224807-15224866)
chr4 (40-134)||(16243401-16243493)
chr4 (48-95)||(25555503-25555550)
chr4 (40-98)||(2014791-2014849)
chr4 (25-103)||(15093775-15093853)
chr4 (47-101)||(15353348-15353402)
chr4 (206-244)||(43256051-43256089)
chr4 (52-127)||(45938173-45938246)
chr4 (48-95)||(11250608-11250655)
chr4 (40-99)||(42997484-42997543)
chr4 (40-98)||(18602766-18602824)
chr4 (47-103)||(5339020-5339076)
chr4 (49-120)||(10712874-10712943)
chr4 (49-120)||(10926644-10926713)
chr4 (40-96)||(18609340-18609396)
chr4 (48-84)||(23843501-23843537)
chr4 (21-84)||(6899891-6899954)
chr4 (53-127)||(9530460-9530532)
chr4 (25-84)||(15121858-15121917)
chr4 (52-95)||(19757639-19757682)
chr4 (52-95)||(19782124-19782167)
chr4 (24-74)||(8574935-8574985)
chr4 (24-82)||(18239523-18239581)
chr4 (21-74)||(39706356-39706409)
chr4 (196-244)||(1951651-1951699)
chr4 (25-84)||(13569502-13569561)
chr4 (49-120)||(14954183-14954252)
chr4 (18-74)||(19242693-19242749)
chr4 (49-120)||(25689891-25689960)
[»] chr5 (65 HSPs)
chr5 (22-134)||(17410434-17410546)
chr5 (40-134)||(23535588-23535681)
chr5 (49-131)||(15236783-15236865)
chr5 (49-131)||(19472723-19472805)
chr5 (49-131)||(20295868-20295950)
chr5 (22-99)||(24767588-24767665)
chr5 (25-101)||(21366705-21366781)
chr5 (40-134)||(20911172-20911263)
chr5 (43-127)||(42805436-42805518)
chr5 (43-134)||(18774219-18774308)
chr5 (43-133)||(18784062-18784150)
chr5 (49-114)||(40723607-40723672)
chr5 (40-134)||(18355970-18356061)
chr5 (25-101)||(1859017-1859093)
chr5 (44-127)||(20232568-20232649)
chr5 (44-119)||(21340782-21340855)
chr5 (47-95)||(26680604-26680652)
chr5 (44-127)||(26742754-26742835)
chr5 (47-95)||(26952211-26952259)
chr5 (30-101)||(123346-123417)
chr5 (40-99)||(21885223-21885282)
chr5 (25-95)||(20805552-20805622)
chr5 (48-101)||(23451371-23451424)
chr5 (23-103)||(17517240-17517320)
chr5 (25-101)||(20766974-20767050)
chr5 (25-101)||(23458592-23458668)
chr5 (25-101)||(23462853-23462929)
chr5 (25-101)||(23572084-23572160)
chr5 (44-127)||(26666138-26666219)
chr5 (44-127)||(26937735-26937816)
chr5 (47-95)||(31342169-31342217)
chr5 (40-99)||(10752956-10753015)
chr5 (48-95)||(12028612-12028659)
chr5 (48-95)||(17919198-17919245)
chr5 (40-98)||(4036232-4036290)
chr5 (190-244)||(23535479-23535533)
chr5 (47-101)||(24221899-24221953)
chr5 (40-98)||(25229441-25229499)
chr5 (40-98)||(25293597-25293655)
chr5 (25-101)||(23512098-23512174)
chr5 (44-127)||(24533055-24533136)
chr5 (51-99)||(26172488-26172536)
chr5 (25-84)||(21873254-21873313)
chr5 (206-244)||(18356505-18356543)
chr5 (48-101)||(23201383-23201436)
chr5 (25-82)||(23501415-23501472)
chr5 (49-120)||(10753385-10753454)
chr5 (25-84)||(14079149-14079208)
chr5 (24-79)||(2154721-2154776)
chr5 (52-95)||(16674177-16674220)
chr5 (198-241)||(21366558-21366601)
chr5 (25-84)||(22032323-22032382)
chr5 (48-95)||(22757148-22757195)
chr5 (24-79)||(31061068-31061123)
chr5 (52-95)||(33409253-33409296)
chr5 (24-79)||(42245472-42245527)
chr5 (52-98)||(17718474-17718520)
chr5 (190-244)||(20910690-20910744)
chr5 (48-102)||(26704098-26704152)
chr5 (48-102)||(26973831-26973885)
chr5 (21-74)||(21329565-21329618)
chr5 (25-101)||(18770042-18770118)
chr5 (220-252)||(23451549-23451581)
chr5 (220-252)||(23458793-23458825)
chr5 (220-252)||(23463054-23463086)
[»] scaffold0029 (5 HSPs)
scaffold0029 (49-134)||(65528-65613)
scaffold0029 (49-131)||(61615-61697)
scaffold0029 (25-101)||(12763-12839)
scaffold0029 (40-99)||(80307-80366)
scaffold0029 (49-120)||(80736-80805)
[»] scaffold0525 (1 HSPs)
scaffold0525 (49-131)||(3878-3960)
[»] scaffold0044 (4 HSPs)
scaffold0044 (40-134)||(12916-13010)
scaffold0044 (40-134)||(19200-19294)
scaffold0044 (40-98)||(62273-62331)
scaffold0044 (190-244)||(13066-13120)
[»] scaffold0349 (1 HSPs)
scaffold0349 (49-131)||(12443-12525)
[»] scaffold0228 (2 HSPs)
scaffold0228 (40-134)||(18632-18726)
scaffold0228 (190-244)||(18522-18576)
[»] chr8 (49 HSPs)
chr8 (49-131)||(43251834-43251916)
chr8 (49-131)||(19278286-19278368)
chr8 (49-131)||(21972588-21972670)
chr8 (49-131)||(21976673-21976755)
chr8 (43-134)||(16231476-16231565)
chr8 (40-134)||(21387086-21387177)
chr8 (43-134)||(22044900-22044989)
chr8 (25-101)||(30643332-30643408)
chr8 (40-133)||(21383666-21383756)
chr8 (47-103)||(15603055-15603111)
chr8 (25-101)||(24755714-24755790)
chr8 (40-120)||(14398123-14398201)
chr8 (47-103)||(15611507-15611563)
chr8 (23-103)||(18678141-18678221)
chr8 (48-103)||(32121759-32121814)
chr8 (47-100)||(22010716-22010769)
chr8 (48-101)||(39094965-39095018)
chr8 (25-101)||(377271-377347)
chr8 (48-108)||(16410287-16410347)
chr8 (25-101)||(16861365-16861441)
chr8 (40-100)||(17055412-17055472)
chr8 (43-134)||(23834188-23834277)
chr8 (25-108)||(17926739-17926822)
chr8 (25-101)||(20466079-20466157)
chr8 (48-95)||(20856472-20856518)
chr8 (40-99)||(32598691-32598750)
chr8 (40-99)||(32605223-32605282)
chr8 (81-131)||(22111904-22111954)
chr8 (25-95)||(23776882-23776952)
chr8 (25-101)||(16184720-16184796)
chr8 (25-101)||(17353984-17354060)
chr8 (52-127)||(17828590-17828663)
chr8 (25-101)||(21162099-21162175)
chr8 (25-101)||(21168772-21168848)
chr8 (52-134)||(15531914-15531994)
chr8 (52-134)||(15538473-15538553)
chr8 (48-101)||(19259632-19259685)
chr8 (49-120)||(18862661-18862730)
chr8 (49-120)||(21410971-21411040)
chr8 (49-120)||(21805463-21805532)
chr8 (49-120)||(21828030-21828099)
chr8 (22-101)||(23648554-23648633)
chr8 (52-95)||(23847053-23847096)
chr8 (190-244)||(16231365-16231419)
chr8 (52-98)||(24445541-24445587)
chr8 (21-74)||(6520368-6520421)
chr8 (18-79)||(6759255-6759316)
chr8 (51-84)||(19983119-19983152)
chr8 (21-74)||(38855319-38855372)
[»] scaffold0372 (1 HSPs)
scaffold0372 (49-131)||(5104-5186)
[»] scaffold0013 (2 HSPs)
scaffold0013 (40-134)||(2673-2766)
scaffold0013 (190-244)||(2563-2617)
[»] scaffold0009 (2 HSPs)
scaffold0009 (40-134)||(228374-228466)
scaffold0009 (190-244)||(228263-228317)
[»] scaffold0028 (1 HSPs)
scaffold0028 (49-131)||(58722-58804)
[»] scaffold0001 (4 HSPs)
scaffold0001 (40-133)||(173304-173395)
scaffold0001 (25-101)||(422572-422648)
scaffold0001 (24-74)||(85692-85742)
scaffold0001 (190-243)||(173452-173505)
[»] scaffold0425 (1 HSPs)
scaffold0425 (25-101)||(159-235)
[»] scaffold0109 (3 HSPs)
scaffold0109 (49-131)||(35946-36027)
scaffold0109 (40-99)||(6957-7016)
scaffold0109 (40-99)||(11336-11395)
[»] scaffold0334 (1 HSPs)
scaffold0334 (43-127)||(18368-18450)
[»] scaffold0168 (1 HSPs)
scaffold0168 (43-134)||(3531-3620)
[»] scaffold0120 (1 HSPs)
scaffold0120 (40-134)||(20018-20110)
[»] scaffold0216 (1 HSPs)
scaffold0216 (25-103)||(17150-17228)
[»] scaffold0166 (1 HSPs)
scaffold0166 (22-99)||(10085-10162)
[»] scaffold0761 (1 HSPs)
scaffold0761 (25-101)||(6349-6425)
[»] scaffold0327 (1 HSPs)
scaffold0327 (25-101)||(289-365)
[»] scaffold0124 (1 HSPs)
scaffold0124 (25-101)||(42627-42703)
[»] scaffold0022 (1 HSPs)
scaffold0022 (25-101)||(73807-73883)
[»] scaffold0676 (3 HSPs)
scaffold0676 (25-108)||(4430-4513)
scaffold0676 (49-120)||(471-541)
scaffold0676 (190-252)||(4603-4665)
[»] scaffold0393 (2 HSPs)
scaffold0393 (25-100)||(1494-1569)
scaffold0393 (198-241)||(1674-1717)
[»] scaffold1296 (1 HSPs)
scaffold1296 (25-95)||(393-463)
[»] scaffold1052 (1 HSPs)
scaffold1052 (33-101)||(2913-2981)
[»] scaffold0476 (2 HSPs)
scaffold0476 (47-134)||(5608-5702)
scaffold0476 (47-134)||(6803-6897)
[»] scaffold0299 (1 HSPs)
scaffold0299 (40-134)||(6693-6784)
[»] scaffold0104 (2 HSPs)
scaffold0104 (25-103)||(9513-9591)
scaffold0104 (25-108)||(1830-1913)
[»] scaffold0615 (1 HSPs)
scaffold0615 (48-101)||(2125-2178)
[»] scaffold0293 (1 HSPs)
scaffold0293 (40-120)||(20479-20557)
[»] scaffold0177 (2 HSPs)
scaffold0177 (53-134)||(13487-13568)
scaffold0177 (190-244)||(13377-13431)
[»] scaffold0093 (1 HSPs)
scaffold0093 (25-105)||(4841-4921)
[»] scaffold0056 (1 HSPs)
scaffold0056 (25-101)||(14127-14203)
[»] scaffold0023 (1 HSPs)
scaffold0023 (25-101)||(38520-38596)
[»] scaffold0079 (1 HSPs)
scaffold0079 (25-108)||(44081-44164)
[»] scaffold0051 (1 HSPs)
scaffold0051 (40-134)||(30897-30988)
[»] scaffold0346 (1 HSPs)
scaffold0346 (25-95)||(15087-15157)
[»] scaffold0405 (2 HSPs)
scaffold0405 (40-120)||(9681-9759)
scaffold0405 (196-244)||(9555-9603)
[»] scaffold0671 (1 HSPs)
scaffold0671 (25-101)||(6095-6171)
[»] scaffold0550 (1 HSPs)
scaffold0550 (25-101)||(7471-7547)
[»] scaffold0080 (1 HSPs)
scaffold0080 (25-102)||(18695-18774)
[»] scaffold0042 (3 HSPs)
scaffold0042 (25-101)||(34960-35036)
scaffold0042 (52-134)||(63878-63958)
scaffold0042 (52-134)||(75762-75842)
[»] scaffold0003 (4 HSPs)
scaffold0003 (25-101)||(414091-414167)
scaffold0003 (42-88)||(71083-71129)
scaffold0003 (52-127)||(139736-139809)
scaffold0003 (206-244)||(71491-71529)
[»] scaffold0585 (1 HSPs)
scaffold0585 (40-99)||(9347-9406)
[»] scaffold0367 (1 HSPs)
scaffold0367 (25-108)||(897-980)
[»] scaffold0158 (2 HSPs)
scaffold0158 (25-100)||(2832-2907)
scaffold0158 (25-100)||(6498-6573)
[»] scaffold0043 (2 HSPs)
scaffold0043 (40-99)||(77205-77264)
scaffold0043 (25-84)||(18236-18295)
[»] scaffold1326 (1 HSPs)
scaffold1326 (47-101)||(1530-1584)
[»] scaffold0130 (1 HSPs)
scaffold0130 (40-98)||(6035-6093)
[»] scaffold0016 (1 HSPs)
scaffold0016 (40-102)||(207880-207942)
[»] scaffold0012 (2 HSPs)
scaffold0012 (43-124)||(24980-25059)
scaffold0012 (49-120)||(189393-189462)
[»] scaffold0171 (1 HSPs)
scaffold0171 (48-101)||(35552-35605)
[»] scaffold0017 (3 HSPs)
scaffold0017 (48-101)||(19773-19826)
scaffold0017 (48-101)||(15251-15304)
scaffold0017 (48-84)||(193034-193070)
[»] scaffold0004 (2 HSPs)
scaffold0004 (25-102)||(69794-69871)
scaffold0004 (190-244)||(10474-10528)
[»] scaffold0210 (2 HSPs)
scaffold0210 (25-101)||(21844-21920)
scaffold0210 (25-101)||(29736-29812)
[»] scaffold0081 (3 HSPs)
scaffold0081 (25-101)||(14664-14740)
scaffold0081 (25-101)||(23679-23755)
scaffold0081 (25-101)||(39103-39179)
[»] scaffold0008 (2 HSPs)
scaffold0008 (25-101)||(30783-30859)
scaffold0008 (40-99)||(1889-1948)
[»] scaffold0637 (1 HSPs)
scaffold0637 (48-95)||(8583-8630)
[»] scaffold0371 (1 HSPs)
scaffold0371 (40-99)||(15350-15409)
[»] scaffold0111 (2 HSPs)
scaffold0111 (40-99)||(8512-8571)
scaffold0111 (40-99)||(15656-15715)
[»] scaffold0070 (2 HSPs)
scaffold0070 (40-134)||(9916-10008)
scaffold0070 (48-84)||(4551-4587)
[»] scaffold0037 (1 HSPs)
scaffold0037 (40-99)||(80810-80869)
[»] scaffold1552 (1 HSPs)
scaffold1552 (40-98)||(381-439)
[»] scaffold0439 (2 HSPs)
scaffold0439 (47-101)||(2477-2531)
scaffold0439 (47-101)||(10337-10391)
[»] scaffold0342 (1 HSPs)
scaffold0342 (48-101)||(7311-7364)
[»] scaffold0096 (1 HSPs)
scaffold0096 (48-101)||(16389-16442)
[»] scaffold0311 (1 HSPs)
scaffold0311 (25-101)||(7128-7204)
[»] scaffold0034 (1 HSPs)
scaffold0034 (40-100)||(16696-16756)
[»] scaffold0010 (1 HSPs)
scaffold0010 (43-134)||(23232-23321)
[»] scaffold1220 (1 HSPs)
scaffold1220 (50-101)||(1817-1868)
[»] scaffold0546 (2 HSPs)
scaffold0546 (40-99)||(6291-6350)
scaffold0546 (40-99)||(1912-1971)
[»] scaffold0410 (1 HSPs)
scaffold0410 (48-95)||(2191-2238)
[»] scaffold0297 (2 HSPs)
scaffold0297 (25-84)||(15737-15796)
scaffold0297 (25-84)||(10580-10639)
[»] scaffold0284 (1 HSPs)
scaffold0284 (40-134)||(18367-18459)
[»] scaffold0184 (1 HSPs)
scaffold0184 (48-95)||(4273-4320)
[»] scaffold0035 (1 HSPs)
scaffold0035 (48-95)||(46773-46820)
[»] scaffold0005 (1 HSPs)
scaffold0005 (25-82)||(280950-281007)
[»] scaffold1124 (1 HSPs)
scaffold1124 (25-101)||(1881-1957)
[»] scaffold0412 (1 HSPs)
scaffold0412 (48-84)||(6472-6508)
[»] scaffold0229 (1 HSPs)
scaffold0229 (49-120)||(11517-11586)
[»] scaffold0215 (1 HSPs)
scaffold0215 (25-101)||(26828-26904)
[»] scaffold0141 (1 HSPs)
scaffold0141 (49-120)||(14103-14172)
[»] scaffold0132 (1 HSPs)
scaffold0132 (52-119)||(36331-36396)
[»] scaffold0101 (1 HSPs)
scaffold0101 (25-101)||(9004-9080)
[»] scaffold0102 (1 HSPs)
scaffold0102 (52-102)||(48500-48550)
[»] scaffold0019 (1 HSPs)
scaffold0019 (22-84)||(29091-29153)
[»] scaffold0574 (1 HSPs)
scaffold0574 (48-81)||(7878-7911)
[»] scaffold0530 (1 HSPs)
scaffold0530 (21-74)||(1102-1155)
[»] scaffold0333 (2 HSPs)
scaffold0333 (21-74)||(6611-6664)
scaffold0333 (21-74)||(13991-14044)
[»] scaffold0243 (1 HSPs)
scaffold0243 (21-74)||(6191-6244)
[»] scaffold0139 (1 HSPs)
scaffold0139 (25-102)||(19980-20057)
[»] scaffold0020 (2 HSPs)
scaffold0020 (21-74)||(15845-15898)
scaffold0020 (48-84)||(178921-178957)
[»] scaffold0819 (1 HSPs)
scaffold0819 (24-72)||(4214-4262)
[»] scaffold0185 (1 HSPs)
scaffold0185 (47-103)||(33569-33625)
[»] scaffold0145 (1 HSPs)
scaffold0145 (19-79)||(9744-9804)
[»] scaffold0114 (1 HSPs)
scaffold0114 (25-101)||(7295-7371)
[»] scaffold0106 (1 HSPs)
scaffold0106 (48-84)||(15296-15332)


Alignment Details
Target: chr1 (Bit Score: 105; Significance: 1e-52; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 24783212 - 24783100
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatttt 121  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24783212 catcatcatcttaatcatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatgaacagcttaatatcaattcatttt 24783113  T
Q  122 caacaacttcttg 134  Q
    |||||||||||||    
T  24783112 caacaacttcttg 24783100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 36819403 - 36819308
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatc-aattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  36819403 cttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaccagcttaatatcaaattcattttcaacaacttcttg 36819308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 1010744 - 1010826
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1010744 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 1010826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 16080536 - 16080444
Alignment:
Q  42 tattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||    
T  16080536 tattcagactcatgcaacttagttaattaaaaatagcagcataatcagatcacatcaataacttattatcaattcattttcaacaacttcttg 16080444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 20228894 - 20228812
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20228894 actcatgcaacttagtttaataacaatggcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 20228812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 16375543 - 16375461
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  16375543 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 16375461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 21407376 - 21407458
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  21407376 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 21407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 52639562 - 52639644
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| |||||||||||||||||||| |||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  52639562 actcatgtaacttagttaaataacaataacagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 52639644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 18182237 - 18182159
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18182237 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaacagc 18182159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 19211883 - 19211972
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||  ||||||||| ||||||||| ||||||| ||||||    
T  19211883 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacgtca--agcttaataacaattcattctcaacaatttcttg 19211972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 21313122 - 21313185
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataa 85  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21313122 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataa 21313185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 33797295 - 33797386
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||| |||||||||| |||||    
T  33797295 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttg 33797386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 3473039 - 3472969
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||| |||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3473039 catcaacttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 3472969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 20138099 - 20138188
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||   | |||||| ||| ||||| ||||||| ||||||    
T  20138099 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttg 20138188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 22449382 - 22449299
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaat 108  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||| | ||||||||||||||||||||| ||| ||| ||||    
T  22449382 catcatcttaatcatcttgtatagactcatgcaacttagttaaataatagtagcagcataatcagatcacaacaagagcataat 22449299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 17678702 - 17678626
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  17678702 catcatcttattcatcttataacgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaaca 17678626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 3705159 - 3705105
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  3705159 agactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaaca 3705105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 21788159 - 21788081
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||| | |||||||   ||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||    
T  21788159 catcatcttattcatcttatattgactcatgcaacttagttaaataaccatagcagcataggcagatcacaacaacagc 21788081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 18394059 - 18394012
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  18394059 gactcatgcaacttagttaaataacagcagcagcataatcagatcaca 18394012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 33050118 - 33050067
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  33050118 actcatgcaacttagttaaataacagcagcagcataatcagatcacaacaac 33050067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 45310462 - 45310415
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  45310462 gactcatgcaacttagttaaataacgacagcagcataatcagatcaca 45310415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 16080388 - 16080334
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||||||||||||| |||||||||||||| |||||||  ||||||||||||||||    
T  16080388 cttagcatttcataaaagcttcacagttctcagttaatctcttaaataggtctca 16080334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 18882393 - 18882472
Alignment:
Q  53 atgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||||||| |  ||||||||||| |||||||||  ||||||||| ||| ||||| ||||||| ||||||    
T  18882393 atgcaacttagttaaataacattttcagcataatcaaatcacatca--agcttaataacaaatcattatcaacaatttcttg 18882472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 21022631 - 21022701
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||| ||||| |  ||||||||||||| |||||||||||||||||||||| |  |||||||||    
T  21022631 catcatcttaatcatcttgtatagactcatgcaacatagttaaataacaatagcagcacaggcagatcaca 21022701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 23819383 - 23819300
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||| ||| ||||||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||||| ||| ||||||    
T  23819383 actcatgcaacttcgtttaataacaattgcagcataatcaattcatatca--agcttaataacaattcattttcagcaatttcttg 23819300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 6151848 - 6151905
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagca 82  Q
    |||||||||||| ||||| |  ||||||||||||| ||||||||||||||||||||||    
T  6151848 catcatcttaatcatcttgtatagactcatgcaacgtagttaaataacaatagcagca 6151905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 22468816 - 22468735
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    ||||| ||||||||| | ||||  | |||||||||||||||||||||||||||||||| ||||  ||||| ||| |||||||    
T  22468816 catcaacatcttaatcaacttagactgactcatgcaacttagttaaataacaatagcaacataggcagattacaacaacagc 22468735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 22831503 - 22831446
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagca 82  Q
    |||||||||||| ||||| |  ||||||||||||| ||||||||||||||||||||||    
T  22831503 catcatcttaatcatcttgtatagactcatgcaacatagttaaataacaatagcagca 22831446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 12646888 - 12646969
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||| ||||||||| ||||| ||||||||| |||||||||||| ||||| |||  ||||||||| ||| ||||| |||||||    
T  12646888 ttcagattcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa 12646969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 20229323 - 20229267
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacat 96  Q
    |||||||| |||| ||||||||||||||||||||||  ||||||||||| |||||||    
T  20229323 cttattcatactcttgcaacttagttaaataacaattccagcataatcaaatcacat 20229267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 20135188 - 20135267
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||| ||||||||| | ||||  | ||||||||||||||||||||| |||||||||||||||  ||||| ||| |||||    
T  20135188 catcaacatcttaatcaacttagactgactcatgcaacttagttaaacaacaatagcagcataggcagattacaacaaca 20135267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 45489837 - 45489790
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||    
T  45489837 gactcatgcaacttagttaaataatagcagcagcataatcagatcaca 45489790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 24783044 - 24782986
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctcactat 248  Q
    ||||||||||||||  ||||||||| ||  ||||||||||||||| |||||||||||||    
T  24783044 cttagcatttcataacagcttcacaattttcagttaacatcttaagtaggtctcactat 24782986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 33797711 - 33797749
Alignment:
Q  206 agcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  33797711 agcttcacagttctcagttaacatcttaaataggtctca 33797749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 36819252 - 36819198
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||| ||||||||| |||||||||||||| || |||| |||||||||||||||||    
T  36819252 cttaacatttcataaaagcttcacagttctcatttaatatcttaaataggtctca 36819198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 1925214 - 1925145
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  1925214 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 1925145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 20924228 - 20924159
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  20924228 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 20924159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 39244235 - 39244187
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatca 88  Q
    |||||||| | || |||||||||||||||||||||| ||||||||||||    
T  39244235 cttattcatattcttgcaacttagttaaataacaattgcagcataatca 39244187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 39247790 - 39247742
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatca 88  Q
    |||||||| | || |||||||||||||||||||||| ||||||||||||    
T  39247790 cttattcatattcttgcaacttagttaaataacaattgcagcataatca 39247742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 41388335 - 41388287
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatca 88  Q
    |||||||| | || |||||||||||||||||||||| ||||||||||||    
T  41388335 cttattcatattcttgcaacttagttaaataacaattgcagcataatca 41388287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 20091593 - 20091534
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || |||||||   |||||||||||||  ||||||||||||||||||||||    
T  20091593 catcatcttgatcatcttatatcgactcatgcaactaggttaaataacaatagcagcata 20091534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 42865330 - 42865271
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || |||||||   |||||||||||| ||||||||||||||||||| ||||    
T  42865330 catcatcttgatcatcttatatcgactcatgcaacatagttaaataacaatagcaacata 42865271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 8761728 - 8761674
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||| | |||||||||||||||| ||||| || ||||||||| |||||    
T  8761728 agactcatgcatcatagttaaataacaataacagcacaagcagatcacaacaaca 8761674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 21714569 - 21714623
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||| ||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  21714569 gactcatgcagcttggttaaataacaatagcagcataggcagattacaacaacag 21714623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 13213027 - 13212974
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  13213027 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 13212974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 46975494 - 46975535
Alignment:
Q  54 tgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||| | |||||||||||| ||||||    
T  46975494 tgcaacttagttaaataacatttgcagcataatcaaatcaca 46975535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 21342090 - 21342146
Alignment:
Q  18 tggacatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    ||||| ||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  21342090 tggacttcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 21342146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 27250823 - 27250787
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  27250823 gactcatgcagcttagttaaataacaatagcaacata 27250787  T

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Target: scaffold0036 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 66527 - 66415
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  66527 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcatctt 66428  T
Q  122 caacaacttcttg 134  Q
    |||||||||||||    
T  66427 caacaacttcttg 66415  T

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Target: scaffold0036; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 66359 - 66305
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  66359 cttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctca 66305  T

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Target: scaffold0031 (Bit Score: 101; Significance: 4e-50; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 53559 - 53671
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  53559 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcatctt 53658  T
Q  122 caacaacttcttg 134  Q
    |||||||||||||    
T  53659 caacaacttcttg 53671  T

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Target: scaffold0031; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 53727 - 53781
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  53727 cttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctca 53781  T

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Target: scaffold0031; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 65891 - 65838
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||||||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  65891 actcatgcaacttggttaaataacaatagcagcataggcagattacaacaacag 65838  T

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Target: scaffold0031; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 36171 - 36102
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  36171 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 36102  T

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Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 11312642 - 11312754
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11312642 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcatctt 11312741  T
Q  122 caacaacttcttg 134  Q
    |||||||||||||    
T  11312742 caacaacttcttg 11312754  T

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Target: chr7; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 38 - 133
Target Start/End: Original strand, 12318137 - 12318232
Alignment:
Q  38 atcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttctt 133  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12318137 atcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttctt 12318232  T

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Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 15580701 - 15580793
Alignment:
Q  38 atcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaactt 130  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15580701 atcttattcagactcatgcaacttagttaaataacgatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaactt 15580793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 13635563 - 13635469
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13635563 cttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaatttcttg 13635469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 16583268 - 16583360
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttct 132  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16583268 cttattcagactcatgcaacgtagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaatttct 16583360  T

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Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 70850 - 70768
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  70850 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 70768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 74959 - 74877
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  74959 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 74877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 26292416 - 26292498
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  26292416 actcatgcaacttagttaaataacaatagcagcataatcagattatatcaacagcttaatatcaattcattttcaacaacttc 26292498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 39722287 - 39722369
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  39722287 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaactcattttcaacaacttc 39722369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 15605365 - 15605272
Alignment:
Q  42 tattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatc-aattcattttcaacaacttcttg 134  Q
    ||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15605365 tattcagactcatgcattttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaaattcattttcaacaacttcttg 15605272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 12714885 - 12714967
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  12714885 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 12714967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 12718689 - 12718771
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  12718689 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 12718771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 16114262 - 16114344
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  16114262 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttattatcaattcattttcaacaacttc 16114344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 16117415 - 16117497
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  16117415 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttattatcaattcattttcaacaacttc 16117497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 16907286 - 16907204
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  16907286 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 16907204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 18283387 - 18283469
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  18283387 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 18283469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 9593361 - 9593450
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||||||||||||| ||||||    
T  9593361 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaatttcttg 9593450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 2832561 - 2832482
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2832561 catcatcatcttaatcatcttatatagactcatgcaacttagttaaataacaatagcagcataatcagatcccatcaaca 2832482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 33128 - 33210
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||| ||||||||||||||| |||||||||| || || |||||||||||||||||||||||||||||||||||||    
T  33128 actcatgcaactgagttaaataacaataacagcataatcggaacatatcaacagcttaatatcaattcattttcaacaacttc 33210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 12704744 - 12704662
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||| |||||||||||||||||||||    
T  12704744 actcatgtaacttagttaaataacaatagcagcataatcagattatatcagcagcttaataccaattcattttcaacaacttc 12704662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 18279424 - 18279506
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||||| |||||||||||||||||||||    
T  18279424 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacaacttaataccaattcattttcaacaacttc 18279506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 11987225 - 11987308
Alignment:
Q  41 ttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaaca 126  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||| ||||||||||||    
T  11987225 ttattcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaaatcattttcaaca 11987308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 12723600 - 12723682
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| |||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||| |||||||||||||||    
T  12723600 actcatgtaacttagttaaataacaatatcagcataatcagattatatcaacagcttaataccaatttattttcaacaacttc 12723682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 19148 - 19066
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    ||||||||||||||||||||||||||||||| | |||||||||||| |||||||||  ||||||||| |||||||||||||||||    
T  19148 attcagactcatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaa 19066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 9751871 - 9751794
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9751871 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacag 9751794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 13918872 - 13918781
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||| |||||||||| |||||    
T  13918872 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttg 13918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 14429883 - 14429960
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  14429883 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagccgcataatcagatcacaacaacag 14429960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 7519447 - 7519359
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||| |||||||||| |||||    
T  7519447 attcagactcatccaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttg 7519359  T

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Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 1859178 - 1859087
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||| ||  ||||||||| |||||| ||||||||||| |||||    
T  1859178 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacaaca--agcttaataacaattc-ttttcaacaacatcttg 1859087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 16457446 - 16457358
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||  ||||||||| ||| ||||||||||||| ||||||    
T  16457446 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacatca--agcttaataacaaatcattttcaacaatttcttg 16457358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 12321858 - 12321780
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||| ||||||| ||||| |  ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  12321858 catcttcttaatcatcttgtatagactcatgcaacgtagttaaataacaatagcagcataatcagatcacaacaacagc 12321780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 14152105 - 14152048
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  14152105 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagca 14152048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 2530484 - 2530391
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatca-catcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||  ||||  ||||||||| ||||||||||||| ||| ||||||    
T  2530484 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcataatca--agcttaataacaattcattttcagcaatttcttg 2530391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 25927595 - 25927536
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  25927595 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 25927536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 3271823 - 3271901
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| |||||||||||||||||||| |||||||    
T  3271823 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaacagc 3271901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 39268016 - 39267950
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagat 91  Q
    ||||||||| || ||||| |  |||||||||||||||||||||||||||||||||||||||||||||    
T  39268016 catcatcttgatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagat 39267950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 16275504 - 16275563
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  16275504 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 16275563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 2760153 - 2760207
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  2760153 agactcatgcaacttagttaaataacgaaagcagcataatcagatcacaacaaca 2760207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 35151618 - 35151676
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||    
T  35151618 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatca 35151676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 19649606 - 19649530
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||| || ||||||| | |||||||||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  19649606 catcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcatagacagattacaacaaca 19649530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 13149167 - 13149259
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||   | |||||| ||| ||||| ||||||| ||||||    
T  13149167 cttattcatacacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttg 13149259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 42204017 - 42204064
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  42204017 gactcatgcaacttagttaaacaacaacagcagcataatcagatcaca 42204064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 8917439 - 8917497
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| ||||||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  8917439 cttattcatactcatgcaacttagtttaataacaattgcaacataatcaaatcacatca 8917497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 9446253 - 9446199
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||| |||||    
T  9446253 agactcatgcaacttagttaaataacagcagcaacataatcagatcacaacaaca 9446199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 11312810 - 11312864
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  11312810 cttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctca 11312864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 14216927 - 14216985
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  14216927 cttattcatattcatgcaacttagttcaataacaattgcagcataatcaaatcacatca 14216985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 15580853 - 15580911
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctcactat 248  Q
    ||||||||||||||  ||||||||||||  ||||||||||| |||||||||||||||||    
T  15580853 cttagcatttcataatagcttcacagttttcagttaacatcctaaataggtctcactat 15580911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 15728337 - 15728395
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  15728337 cttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatca 15728395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 16724723 - 16724665
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||||| | |||||||||    
T  16724723 cttattcatactcatgcaacttagtttaataacaattgcagcataatgaaatcacatca 16724665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 17701737 - 17701679
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||||| | |||||||||    
T  17701737 cttattcatactcatgcaacttagtttaataacaattgcagcataatgaaatcacatca 17701679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 18425450 - 18425528
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    |||||||| | || |||||||||||||||||||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  18425450 cttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatca--agcttaataacaattcattt 18425528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 18556996 - 18557043
Alignment:
Q  51 tcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||    
T  18556996 tcatgcaacttagttaaataacatttgcagcataatcaaatcacatca 18557043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 12318289 - 12318343
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||| |||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  12318289 cttaacatttcataatagcttcacagttctcagttaatatcttaaataggtctca 12318343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 13461773 - 13461831
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| |||||||||| |||||| ||| ||||| |||||||||||| |||||||||    
T  13461773 cttattcatactcatgcaaattagtttaattacaattgcagcataatcaaatcacatca 13461831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 15605216 - 15605162
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||| |||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  15605216 cttaacatttcataatagcttcacagttctcagttaatatcttaaataggtctca 15605162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 16583417 - 16583471
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||| ||||||||||    
T  16583417 cttagcatttcataatagcttcacagttctcagttaatatcttatataggtctca 16583471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 6801229 - 6801310
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    ||||||| |||||||| ||||| ||||||||| |||||||||||| ||||  |||  ||||||||| ||| ||||| |||||||    
T  6801229 ttcagacccatgcaacatagtttaataacaattgcagcataatcaaatcatgtca--agcttaataacaaatcattctcaacaa 6801310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 17138177 - 17138101
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||| ||||||||||||| ||||  ||||| ||| |||||    
T  17138177 catcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcaacataggcagattacaacaaca 17138101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 45170091 - 45170022
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  45170091 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 45170022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 237
Target Start/End: Complemental strand, 2530071 - 2530040
Alignment:
Q  206 agcttcacagttcccagttaacatcttaaata 237  Q
    ||||||||||||||||||||||||||||||||    
T  2530071 agcttcacagttcccagttaacatcttaaata 2530040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 12187019 - 12187078
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| |||||||   |||||||||||||| ||| ||||||||||||| ||||    
T  12187019 catcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcaacata 12187078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 14430063 - 14430106
Alignment:
Q  198 ttcatagaagcttcacagttcccagttaacatcttaaataggtc 241  Q
    ||||||| |||||||||| || ||||||||||||||||||||||    
T  14430063 ttcatagcagcttcacagatctcagttaacatcttaaataggtc 14430106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 14932851 - 14932792
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| | ||||  | ||||||||| |||||||||||||||||||| ||||||    
T  14932851 catcatcttaatcaacttagactgactcatgcgacttagttaaataacaatagtagcata 14932792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 15356286 - 15356227
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| | ||||  | ||||||||| |||||||||||||||||||| ||||||    
T  15356286 catcatcttaatcaacttagactgactcatgcgacttagttaaataacaatagtagcata 15356227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 15360400 - 15360341
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| | ||||  | ||||||||| |||||||||||||||||||| ||||||    
T  15360400 catcatcttaatcaacttagactgactcatgcgacttagttaaataacaatagtagcata 15360341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 20569690 - 20569643
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  20569690 gactcatgcaacttagttaaataacagcagcaacataatcatatcaca 20569643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 13635413 - 13635359
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||| | ||||| |||||||||||| ||||    
T  13635413 cttagcatttcataatagcttcacagttctctgttaatatcttaaataggcctca 13635359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 18430709 - 18430767
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    |||||||||||||||| | ||||  | |||||||||| |||||||||||||||| ||||    
T  18430709 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagca 18430767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 84
Target Start/End: Original strand, 24054477 - 24054523
Alignment:
Q  38 atcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  24054477 atcttatactgactcatgcaacttggttaattaacaatagcagcata 24054523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 67745 - 67798
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  67745 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 67798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 16438978 - 16438921
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctcacta 247  Q
    |||| ||||||||| |||||||||||||| ||||  | ||||| ||||||||||||||    
T  16438978 cttaacatttcatataagcttcacagttctcagtccatatctttaataggtctcacta 16438921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 28505419 - 28505366
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    ||||||||||||| || ||||||  | |||||||||| ||||||||||||||||    
T  28505419 acatcatcatcttcatcatcttagaccgactcatgcagcttagttaaataacaa 28505366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 47831807 - 47831860
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  47831807 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 47831860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 9593513 - 9593561
Alignment:
Q  196 atttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||||||| |||||||||||||| ||||||| ||||| | |||||||||    
T  9593513 atttcataaaagcttcacagttctcagttaatatctttattaggtctca 9593561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 9644476 - 9644524
Alignment:
Q  196 atttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||||||| |||||||||||||| ||||||| ||||| | |||||||||    
T  9644476 atttcataaaagcttcacagttctcagttaatatctttattaggtctca 9644524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 9703263 - 9703322
Alignment:
Q  25 catcatcttaattatcttat-tcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || ||||||| ||| ||||||||||| |||||||||||||||| |||||||    
T  9703263 catcatcttgatcatcttatatca-actcatgcaacatagttaaataacaataacagcata 9703322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 15211484 - 15211520
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||||||||||| |||||| |||||||||    
T  15211484 gactcatgcaacttagttaattaacaacagcagcata 15211520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 18456530 - 18456470
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||| |||||| ||||    
T  18456530 tcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacgatagcaacata 18456470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 32216665 - 32216606
Alignment:
Q  25 catcatcttaattatcttat-tcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || ||||||| ||| ||||||||||| ||||||||||| ||||||||||||    
T  32216665 catcatcttgatcatcttatatca-actcatgcaacatagttaaataataatagcagcata 32216606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 38227508 - 38227544
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  38227508 gactcatgcagcttagttaaataacaatagcaacata 38227544  T

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Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 73)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 17804191 - 17804303
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17804191 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcatctt 17804290  T
Q  122 caacaacttcttg 134  Q
    |||||||||||||    
T  17804291 caacaacttcttg 17804303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 25767280 - 25767168
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatttt 121  Q
    ||||||||| | || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  25767280 catcatcatttcaaatatcttattcagactcatgcaacttagttaagtaacaatagcagcataatcagatcacaccaacagcttaatatcaattcatctt 25767181  T
Q  122 caacaacttcttg 134  Q
    |||||||||||||    
T  25767180 caacaacttcttg 25767168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 22430122 - 22430030
Alignment:
Q  42 tattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22430122 tattcagactcatgcaacttagttaattaactatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaatttcttg 22430030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 22862967 - 22863048
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaactt 130  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22862967 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaactt 22863048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 1644726 - 1644808
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1644726 actcatgcaacttagtttaataacaatggcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 1644808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 8243882 - 8243964
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  8243882 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 8243964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 11566883 - 11566965
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  11566883 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 11566965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 14472292 - 14472373
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  14472292 actcatgcaacttagttaa-taacaatagcagcataattagatcatatcaacagcttaatatcaattcattttcaacaacttc 14472373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 19870611 - 19870693
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  19870611 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttattatcaattcattttcaacaacttc 19870693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 23395089 - 23395171
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  23395089 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 23395171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 18955848 - 18955764
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttctt 133  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||||||    
T  18955848 actcatgcaacttagtttaataacaatagcagcataatcggatcatatcaacaacttaatatcaattcattttcaataacttctt 18955764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 27325730 - 27325650
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  27325730 catcatcatttcaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcatatcacatcaacag 27325650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 18917351 - 18917269
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||||||  ||||||||||||||||||||||||||    
T  18917351 actcatgcaacttagttaaataacaatagcagcataattatatcatatcaacagcccaatatcaattcattttcaacaacttc 18917269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 23989941 - 23990023
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| || |||||||||||||||||||||    
T  23989941 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttattaccaattcattttcaacaacttc 23990023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 12706705 - 12706794
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||||||||| ||| ||||||    
T  12706705 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcagcaatttcttg 12706794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 16523500 - 16523425
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16523500 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaac 16523425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 23414658 - 23414749
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||| |||||||||| |||||    
T  23414658 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttg 23414749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 27556416 - 27556507
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||| |||||||||| |||||    
T  27556416 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttg 27556507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 18907111 - 18907189
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||||| ||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  18907111 catcatcttaatcatcttgtatagactcatgcagcttagttaaataacaatagcagcataatcagatcacaacaacagc 18907189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 12618929 - 12618850
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaact 129  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| ||| ||||||| |||||||||||    
T  12618929 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttgataccaattca-tttcaacaact 12618850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 5616908 - 5616816
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  || |||||| ||| ||||| ||| ||||||||||    
T  5616908 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agtttaataacaaatcattctcagcaacttcttg 5616816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 15894555 - 15894479
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||    
T  15894555 catcatcttaatcatcttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaaca 15894479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 16741222 - 16741311
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| |||||||||||||| ||||||||| | |||||||||| |||||||||  ||||||||| ||||||| | ||||||| ||||||    
T  16741222 attcagacacatgcaacttagtttaataacaattgtagcataatcaaatcacatca--agcttaataacaattcactgtcaacaatttcttg 16741311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 18180494 - 18180570
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  18180494 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaaca 18180570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 19848114 - 19848034
Alignment:
Q  23 atcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||| ||||||||| | ||||  | |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  19848114 atcaacatcttaatcaacttagactgactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacagc 19848034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 20908098 - 20908022
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||| | |  |||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  20908098 catcatcttaatcatcatgtatagactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaaca 20908022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 1644300 - 1644359
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  1644300 cttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 1644359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 19790873 - 19790826
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19790873 gactcatgcaacttagttaaataacaacagcagcataatcagatcaca 19790826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 31478324 - 31478265
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  31478324 cttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 31478265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 15041667 - 15041589
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||  | |||||||  ||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||    
T  15041667 catcatcttgttcatcttataaagactcatgcaacttagttaaataacaatagtagcataggcagatcacaacaacagc 15041589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 27553666 - 27553612
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  27553666 agactcatgcaacttagttaaagaacaacagcagcataatcagatcacaacaaca 27553612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 19873120 - 19873197
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| || ||||||| | |||||||||||||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  19873120 catcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaacag 19873197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 2685407 - 2685326
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| ||||| |||  ||||||||| ||| ||||| |||||||    
T  2685407 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa 2685326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 19662787 - 19662868
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| ||||| |||  ||||||||| ||| ||||| |||||||    
T  19662787 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa 19662868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 21766695 - 21766771
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||| ||||  ||||||||| |||||    
T  21766695 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcaacataggcagatcacaacaaca 21766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 23992429 - 23992509
Alignment:
Q  23 atcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||| ||||||||| | ||||  | |||||||||||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  23992429 atcaacatcttaatcaacttagactgactcatgcaacttagctaaataacaatagcagcataggcagattacatcaacagc 23992509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 19862978 - 19863037
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || ||||||| | |||||||||||||| ||||||||||||||||||||||    
T  19862978 catcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcata 19863037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 1587824 - 1587766
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  1587824 cttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatca 1587766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 17804359 - 17804413
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  17804359 cttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctca 17804413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 27416278 - 27416232
Alignment:
Q  42 tattcagactcatgcaacttagttaaataacaatagcagcataatca 88  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  27416278 tattcatactcatgcaacttagttaaataacaattgcagcataatca 27416232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 23657513 - 23657468
Alignment:
Q  50 ctcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  23657513 ctcatgcaacttagttaaataacagcagcagcataatcagatcaca 23657468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 27567704 - 27567656
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  27567704 agactcatacaacttagttaaataacagcagcagcataatcagatcaca 27567656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 9482386 - 9482294
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| || |||||||||||||||||||||| | ||||||||| || |||||||||   | |||||| ||| ||||| ||||||| ||||||    
T  9482386 cttattcatacacatgcaacttagttaaataacatttgcagcataagcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttg 9482294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 12496333 - 12496376
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||| | |||||||||||||||||||    
T  12496333 catgcaacttagttaaataacatttgcagcataatcagatcaca 12496376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 21702300 - 21702359
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | |||||||||||| |||||||||||| |||||| ||||| ||||||||||    
T  21702300 cttattcataatcatgcaacttaattaaataacaattgcagcaaaatcaaatcacatcaa 21702359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 22429974 - 22429919
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctcac 245  Q
    ||||||||||||||  | ||||||||||| ||| ||||||||||||||||||||||    
T  22429974 cttagcatttcataataacttcacagttctcagctaacatcttaaataggtctcac 22429919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 22432249 - 22432308
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || ||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  22432249 catcatcttgatcatcttataccgactcatgcaacttggttaattaacaatagcagcata 22432308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 22438799 - 22438858
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || ||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  22438799 catcatcttgatcatcttataccgactcatgcaacttggttaattaacaatagcagcata 22438858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 20803647 - 20803589
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||| ||||||| ||||||||| |||||||||||| |||||||||    
T  20803647 cttattcatattcatgcagcttagtttaataacaattgcagcataatcaaatcacatca 20803589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 25767112 - 25767058
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  || |||||||||| ||||||| |||||||||||||||||    
T  25767112 cttagcatttcataatagtttcacagttctcagttaatatcttaaataggtctca 25767058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 244
Target Start/End: Complemental strand, 27415870 - 27415832
Alignment:
Q  206 agcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  27415870 agcttcacagttctcagttaacatcttaaataggtctca 27415832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 16624144 - 16624222
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    |||||||| | || |||||||||||||||||||||| ||||||||||||  ||| ||||  | ||||||| ||||||||||    
T  16624144 cttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatca--aacttaataacaattcattt 16624222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 22408398 - 22408345
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||| |||||||| |||||||||||| ||||| |||||||||||||| ||||    
T  22408398 agactcgtgcaacttggttaaataacaaaagcagtataatcagatcacaacaac 22408345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 25642304 - 25642227
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| || |||||||   |||||||||||||  ||||||||||||||||||||||  ||||| ||| ||||||    
T  25642304 catcatcttgatcatcttatatcgactcatgcaactaggttaaataacaatagcagcatagacagattacaacaacag 25642227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 31477895 - 31477826
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  31477895 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 31477826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 17287917 - 17287854
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||||||| | ||||  | |||||||||| |||||||||||||||| |||| ||||    
T  17287917 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagcaacata 17287854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 22335014 - 22334955
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || |||||||   |||||||||||||  ||||||||||||||||||||||    
T  22335014 catcatcttgatcatcttatatcgactcatgcaactaggttaaataacaatagcagcata 22334955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 12706851 - 12706905
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||| ||||||||| |||||||||||||| |||| || ||||| |||||||||||    
T  12706851 cttaacatttcataaaagcttcacagttctcagtcaatatctttaataggtctca 12706905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 16741368 - 16741430
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctcactattacc 252  Q
    |||| ||||||||| |||||||||| ||| |||| || ||||| |||||||||||||| ||||    
T  16741368 cttaacatttcataaaagcttcacaattctcagtcaatatctttaataggtctcactagtacc 16741430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 21740148 - 21740094
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    |||||||||||| ||||| |  |||||| |||||| |||||||||||||||||||    
T  21740148 catcatcttaatcatcttgtatagactcgtgcaacatagttaaataacaatagca 21740094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 25714417 - 25714475
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    |||||||||||||||| | ||||  | |||||||||| |||||||||||||||| ||||    
T  25714417 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagca 25714475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 1595549 - 1595610
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataa 85  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||||| |||| |||||    
T  1595549 tcatcatcttaatcaacttagactgactcatgcagcttagttaaataacaacagcaacataa 1595610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 19303661 - 19303608
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    ||||||||||||| || ||||||  | |||||||||| ||||||||||||||||    
T  19303661 acatcatcatcttcatcatcttagaccgactcatgcagcttagttaaataacaa 19303608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 27333339 - 27333286
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  27333339 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 27333286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 27394079 - 27394026
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  27394079 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 27394026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 34963371 - 34963428
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    ||||| ||||||||| | ||||  | ||||||||||||||||||||||||||| ||||    
T  34963371 catcaacatcttaatcaacttagaccgactcatgcaacttagttaaataacaacagca 34963428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 16760316 - 16760385
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    |||| |||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  16760316 actcgtgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 16760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 22074307 - 22074251
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    ||||||||||| | ||||||||||| |||| ||||| || ||||||||| |||||||    
T  22074307 agactcatgcatcatagttaaataataataacagcacaagcagatcacaacaacagc 22074251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 22949129 - 22949198
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||| ||||    
T  22949129 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaatttattt 22949198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 22953085 - 22953154
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||| ||||    
T  22953085 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaatttattt 22953154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 23871573 - 23871642
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||| ||||    
T  23871573 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaatttattt 23871642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 23875529 - 23875598
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||| ||||    
T  23875529 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaatttattt 23875598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 25656629 - 25656689
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||||| |||| ||||    
T  25656629 tcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagcaacata 25656689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 9e-48; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 2897935 - 2897823
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatttt 121  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2897935 catcatcaacttgattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaatttatttt 2897836  T
Q  122 caacaacttcttg 134  Q
    || ||||||||||    
T  2897835 catcaacttcttg 2897823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 20461612 - 20461500
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  20461612 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacaacttaatatcaattcatctt 20461513  T
Q  122 caacaacttcttg 134  Q
    |||||||||||||    
T  20461512 caacaacttcttg 20461500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 7793462 - 7793349
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataa-tcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  7793462 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataattcagatcacatcaacagcttaatatcaattcatct 7793363  T
Q  121 tcaacaacttcttg 134  Q
    ||||||||||||||    
T  7793362 tcaacaacttcttg 7793349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 15482675 - 15482769
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15482675 cttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaatttcttg 15482769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 327277 - 327164
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataa-tcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||| |    
T  327277 catcatcaatttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataactaagatcacatcaacagcttaatatcaattcatct 327178  T
Q  121 tcaacaacttcttg 134  Q
    ||||||| ||||||    
T  327177 tcaacaatttcttg 327164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 30065970 - 30066052
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30065970 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 30066052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 11070092 - 11070174
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11070092 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 11070174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 11165614 - 11165532
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11165614 actcatgtaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 11165532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 15617398 - 15617476
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15617398 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaa 15617476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 31097649 - 31097555
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  31097649 cttattcagactcatgcaacatagttaattaacaattgcagcataatcagatcacatcaatagcttaataacaattcattttcaacaatttcttg 31097555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 55022891 - 55022973
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  55022891 actcatgtaacttagttaaataacaatagcagtataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 55022973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 14668554 - 14668634
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14668554 catcatcatcttaatcatcttatatagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 14668634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 7109722 - 7109804
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  7109722 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 7109804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 7113657 - 7113739
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  7113657 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 7113739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 14499349 - 14499431
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||||||||||||||||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  14499349 actcatgcaacttagttaaataacaataaccgcataatcagatcttatcaacagcttaatatcaattcattttcaacaacttc 14499431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 22336743 - 22336825
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  22336743 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 22336825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 27409729 - 27409647
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  27409729 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 27409647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 28949748 - 28949830
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  28949748 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 28949830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 134
Target Start/End: Original strand, 11854757 - 11854842
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||| |||||||||    
T  11854757 actcatgcaacttagtttaataacaatagcagcataatcagatcatatcaacaacttaacatcaattcattttcaataacttcttg 11854842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 14665398 - 14665478
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14665398 catcatcatcttaatcatcttatatagactcatgcaacttagttaaataacaatagcaacataatcagatcacatcaacag 14665478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 22321688 - 22321770
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||    
T  22321688 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaatagcttaataccaattcattttcaacaacttc 22321770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 12172796 - 12172872
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||| |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12172796 catcatcataatcatcttatatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaaca 12172872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 18384032 - 18383956
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18384032 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaaca 18383956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 8489564 - 8489473
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||| |||||||||| |||||    
T  8489564 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttg 8489473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 15464878 - 15464969
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||| |||||||||| |||||    
T  15464878 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttg 15464969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 19726004 - 19725949
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19726004 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 19725949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 11862793 - 11862862
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcac 94  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11862793 catcatcttaatcatcttgtaaagactcatgcaacttagttaaataacaatagcagcataatcagatcac 11862862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 15850176 - 15850095
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttca 123  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||  || |||||| |||||||||||||    
T  15850176 cttattcagtctcatgcaacttagttaaataacaattgcagcataatcagatcatatca--agtttaataacaattcattttca 15850095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 5223077 - 5223168
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| |||||| |||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||| |||||||||| |||||    
T  5223077 cttattcatactcatacaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttg 5223168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 11854430 - 11854520
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttctt 133  Q
    |||||||| ||||||||||||||||||||||||||| || ||||||||| |||||||||  ||||||||| ||||||| |||||||||| ||||    
T  11854430 cttattcatactcatgcaacttagttaaataacaattgcggcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatctt 11854520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 12496257 - 12496335
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||| | |||||||   ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  12496257 catcatcttattcatcttataatgactcatgcaacttagttaaataacaaaagcagcataatcagatcacaacaacagc 12496335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 12038068 - 12037993
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  | |||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  12038068 catcatcttaatcatcttatataaactcatgcaacttagttaaataacaa-agcagcataatcagatcacaacaaca 12037993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 23053200 - 23053128
Alignment:
Q  29 atcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||    
T  23053200 atcttaatcatcttatatagactcatgcaacatagttaaataacaatagcagcataagcagatcacaacaaca 23053128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 3403050 - 3403003
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3403050 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 3403003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 322592 - 322662
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||| |||| ||||| |  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  322592 catcatcataatcatcttgtatagactcatgcaacttagttaaataacaatagcggcataatcagatcaca 322662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 1982905 - 1982851
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  1982905 agactcatgcaacttagttaaataacaaaagcagcataatcagatcacaacaaca 1982851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 11298644 - 11298568
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  11298644 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaaca 11298568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 11851581 - 11851657
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||| |||| |||||||| |||||||| |||||    
T  11851581 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacgatagtagcataattagatcacaacaaca 11851657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 3390030 - 3389983
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3390030 gactcatgcaacttagttaaataacaacagcagcataatcagatcaca 3389983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 4589287 - 4589228
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  4589287 cttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 4589228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 12339479 - 12339570
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||  || |||||  || |||||| ||||||| |||||||||| |||||    
T  12339479 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaattctcatca--agtttaataacaattca-tttcaacaacatcttg 12339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 19775360 - 19775419
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  19775360 cttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 19775419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 2897767 - 2897705
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctcactattacc 252  Q
    ||||||||||||||  ||||||||||||  |||||||||||||||||||| ||||||||||||    
T  2897767 cttagcatttcataatagcttcacagttaacagttaacatcttaaataggcctcactattacc 2897705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 11300854 - 11300767
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||| | |||||| ||||||| |||||||||| |||||    
T  11300854 ttcagactcatgcaacttagttaaataacaattgtagcataatcaaatcacat-aac-gtttaataacaattca-tttcaacaacatcttg 11300767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 46822267 - 46822345
Alignment:
Q  23 atcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||| ||||||||| | ||||  | |||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  46822267 atcaacatcttaatcaacttagactgactcatgcaacttagttaaataacaatagcagcataggcagattacatcaaca 46822345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 12511084 - 12511137
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  12511084 gactcatgcaacttagttaaataacaatagcagcataggcagattacatcaaca 12511137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 11557477 - 11557425
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  11557477 actcatgcaacttagttaaataacagcagcagcataatcagatcacaacaaca 11557425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 15878168 - 15878092
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||| || ||||||| | |||||||||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  15878168 catcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 15878092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 17241990 - 17242071
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| ||||| |||  ||||||||| ||| ||||| |||||||    
T  17241990 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa 17242071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 23077594 - 23077518
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||||||||||||||| |||||||||||| |||| ||||  ||||||||| |||||    
T  23077594 catcatcttaatcatcttatatagactcatgcaacttggttaaataacaacagcaacataggcagatcacaacaaca 23077518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 11595233 - 11595186
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  11595233 gactcatgcaacttagttaaataacagcagcagcataatcagatcaca 11595186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 14878633 - 14878574
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||    
T  14878633 catcatcttattcatcttatattgactcatgcaacttagttaaataacaatagcagcata 14878574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 16696798 - 16696857
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  16696798 cttattcataatcatgcaacttagttaaataacaattgcagcataaacaaatcacatcaa 16696857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 16798147 - 16798055
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||| ||||| ||||||||  ||| |||||||| |||||||||  | ||||||| ||| ||||||||||||| ||||||    
T  16798147 cttattcatactcatgcaacatagtttaataacaagtgcaacataatcaaatcacatca--aacttaataacaaatcattttcaacaatttcttg 16798055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 327108 - 327054
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  327108 cttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctca 327054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 7793293 - 7793239
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  7793293 cttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctca 7793239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 15482825 - 15482879
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  15482825 cttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctca 15482879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 20461444 - 20461390
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  20461444 cttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctca 20461390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 16750682 - 16750604
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    |||||||| | || |||||||||||||||||||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  16750682 cttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatca--agcttaataacaattcattt 16750604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 856140 - 856216
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||||||| ||||||||||||| ||||  ||||| ||| |||||    
T  856140 catcatcttaatcatcttatatcgactcatgcaacttagttgaataacaatagcaacataggcagattacaacaaca 856216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 15941985 - 15941912
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||||||||||||||||| | |||||||||||| |||||||||  |  |||||| ||| |||||||||||||    
T  15941985 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--aatttaataacaaatcattttcaacaa 15941912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 26196548 - 26196500
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataaca 73  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||||    
T  26196548 catcatcttaatcatcttatatagactcatgcaacttagttaaataaca 26196500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 30029867 - 30029922
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||||||||||| ||||||||||||||||||  ||||| ||| |||||||    
T  30029867 gactcatgcaacttagtttaataacaatagcagcatagacagattacaacaacagc 30029922  T

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Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 31097499 - 31097444
Alignment:
Q  190 cttagcatt-tcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||    
T  31097499 cttagcattctcataaaagcttcacagttctcagttaatatcttaaataggtctca 31097444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 42325964 - 42326011
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  42325964 gactcatgcaacttagttaaaaaacagcagcagcataatcagatcaca 42326011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 23408428 - 23408506
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    ||||||||| || ||||||| | |||||||||||||| ||||| ||||||||||| ||||  ||||| ||| |||||||    
T  23408428 catcatcttgatcatcttatactgactcatgcaacttggttaattaacaatagcaacatagacagattacaacaacagc 23408506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 1598560 - 1598487
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctt-aatatcaattcattttcaacaa 127  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||  ||||| |||| ||| |||||||||||||    
T  1598560 catgcaacttagttaaataac-attgcagcataatcaaatcacatca--agcttaaataacaaatcattttcaacaa 1598487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 15051531 - 15051584
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| ||||||||||||||||||||||  ||| ||||| |||||    
T  15051531 gactcatgcaacttggttaaataacaatagcagcataggcagttcacaacaaca 15051584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 15060307 - 15060360
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| ||||||||||||||||||||||  ||| ||||| |||||    
T  15060307 gactcatgcaacttggttaaataacaatagcagcataggcagttcacaacaaca 15060360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 16909765 - 16909818
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| ||||||||||||||| ||||||| ||| ||||| |||||    
T  16909765 gactcatgcaacttggttaaataacaatagtagcataagcagttcacaacaaca 16909818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 4107482 - 4107413
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  4107482 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 4107413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 4111334 - 4111265
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  4111334 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 4111265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 15964993 - 15965062
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  15964993 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 15965062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 15968917 - 15968986
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  15968917 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 15968986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 15972841 - 15972910
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  15972841 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 15972910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 17525252 - 17525216
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17525252 gactcatgcaacatagttaaataacaatagcagcata 17525216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 19775789 - 19775858
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  19775789 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 19775858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 3833699 - 3833742
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  3833699 catgcaacttagttaaataacatttgcagcataatcaaatcaca 3833742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 16454443 - 16454388
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    ||||||||||||| | ||||  | ||||||||||||||||||||||||||| ||||    
T  16454443 tcatcatcttaatcaacttagaccgactcatgcaacttagttaaataacaacagca 16454388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 23083482 - 23083419
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||| || | ||||  | |||||||||| ||||||||||||||||||||| ||||    
T  23083482 acatcatcatcttcatcaacttagaccgactcatgcagcttagttaaataacaatagcaacata 23083419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 38814409 - 38814452
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  38814409 catgcaacttagttaaataacatttgcagcataatcaaatcaca 38814452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 16369423 - 16369476
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| ||||| ||||||||||||||||  ||| ||||| |||||    
T  16369423 gactcatgcaacttggttaagtaacaatagcagcataggcagttcacaacaaca 16369476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 24153326 - 24153266
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||| |||||| ||||    
T  24153326 tcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacgatagcaacata 24153266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 37439721 - 37439652
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| | ||||||||||  ||| ||||  ||||||||| ||||||||||    
T  37439721 actcatgcaacttagtttaacaacaattgtagcataatcaattcatatca--agcttaataacaattcattt 37439652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 9e-48; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 24735397 - 24735509
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatttt 121  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24735397 catcatcactttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcatctt 24735496  T
Q  122 caacaacttcttg 134  Q
    |||||||||||||    
T  24735497 caacaacttcttg 24735509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 10101730 - 10101648
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10101730 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 10101648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 24649378 - 24649460
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24649378 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 24649460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 12901597 - 12901515
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  12901597 actcatgcaacttagttaaataacaataacagcataatcggatcatatcaacagcttaatatcaattcattttcaacaacttc 12901515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 27379518 - 27379436
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  27379518 actcatgcaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 27379436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 27383564 - 27383482
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  27383564 actcatgcaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 27383482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 27601817 - 27601899
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  27601817 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 27601899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 24628564 - 24628482
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | || |||||||||||| |||||||||||||||||||||    
T  24628564 actcatgtaacttagttaaataacaatagcagcataatcagattatattaacagcttaataccaattcattttcaacaacttc 24628482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 22812028 - 22811952
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  22812028 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcaaatcacaacaaca 22811952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 31344890 - 31344981
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||||||| |||||||||  ||||||||| ||||||| |||||||||| |||||    
T  31344890 cttattcatactcatgcaacttagttaaataataattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttg 31344981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 37524697 - 37524751
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  37524697 agactcatgcaacttggttaaataacaaaagcagcataatcagatcacatcaaca 37524751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 25961628 - 25961575
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  25961628 gactcatgcaacttagttaaataacaacagcagcataatcagatcacaacaaca 25961575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 22799243 - 22799167
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  22799243 catcatcttattcatcttatattgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaaca 22799167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 24716645 - 24716569
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  24716645 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaaca 24716569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 24869902 - 24869950
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24869902 agactcatgcaacttagttaaataacaacagcagcataatcagatcaca 24869950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 25963832 - 25963749
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaat 108  Q
    |||||||||| | |||||||   |||||||||||||||||| ||||||||||||||||||  ||||||||| ||||||| ||||    
T  25963832 catcatcttattcatcttataatgactcatgcaacttagttcaataacaatagcagcataggcagatcacaacaacagcataat 25963749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 41666962 - 41667021
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  41666962 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 41667021  T

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Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 21916215 - 21916145
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||||| | || |||||||||||||||    
T  21916215 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaaaaacaacataatcagatcaca 21916145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 24174822 - 24174876
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  24174822 agactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaaca 24174876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 24673569 - 24673639
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||| ||||| | |||||||||||||| | |||||||||||||||||||| || |||||||||    
T  24673569 catcatcttaatcatcttgtacagactcatgcaacatggttaaataacaatagcagcacaagcagatcaca 24673639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 21318731 - 21318683
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  21318731 agactcatgcaacttggttaaataacaaaagcagcataatcagatcaca 21318683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 21327662 - 21327614
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  21327662 agactcatgcaacttggttaaataacaaaagcagcataatcagatcaca 21327614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 22461277 - 22461196
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| ||||| |||  ||||||||| ||| ||||| |||||||    
T  22461277 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa 22461196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 23019823 - 23019747
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||  ||||||||||||||||||||||||||||  ||||||||| |||||    
T  23019823 catcatcttaatcatcttatattgactcataaaacttagttaaataacaatagcagcataggcagatcacaacaaca 23019747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 25616212 - 25616267
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||||||||||||||| ||||||||||||||  ||||| |||||||||||    
T  25616212 gactcatgcaacttagttaaattacaatagcagcataggcagattacatcaacagc 25616267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 19688700 - 19688646
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  19688700 cttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctca 19688646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 24655433 - 24655379
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||| |||||    
T  24655433 agactcatgcaacttagttaaataacagcagcaacataatcagatcacaacaaca 24655379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 24735565 - 24735619
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  24735565 cttagcatttcataatagcttcacagttctcagttaatatcttaaataggtctca 24735619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 27263285 - 27263343
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  27263285 cttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatca 27263343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 18855541 - 18855468
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    ||||||||||||||||| |||| | |||||||||||| |||||||||  ||||||||| ||| ||||| |||||||    
T  18855541 catgcaacttagttaaacaacatttgcagcataatcaaatcacatca--agcttaataacaaatcattctcaacaa 18855468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 40622327 - 40622251
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||| ||||||||||||||||||  ||||| ||| |||||    
T  40622327 catcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcagcataggcagattacaacaaca 40622251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 19928583 - 19928503
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||| | |||||||||||| |||||||||   | |||||| ||| ||||| ||||||| ||||||    
T  19928583 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttg 19928503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 24680191 - 24680258
Alignment:
Q  28 catcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||| ||||| | |||||||| ||||| | |||||||||||||||||||| || |||||||||    
T  24680191 catcttaatcatcttgtacagactcaagcaacatggttaaataacaatagcagcacaagcagatcaca 24680258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 40428486 - 40428533
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  40428486 gactcatgcaacttagttcaataacaaaagcagcatattcagatcaca 40428533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 60829 - 60886
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  60829 cttattcatattcatgcaacttagtttaataacaattgcagcataatca-atcacatca 60886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 22741081 - 22741004
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| || |||||||   |||||||||||||  ||||||||||||||||||||||  ||||| ||| ||||||    
T  22741081 catcatcttgatcatcttatatcgactcatgcaactaggttaaataacaatagcagcatagacagattacaacaacag 22741004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 45678246 - 45678189
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagca 82  Q
    |||||||||||| ||||| |   |||||||||||| ||||||||||||||||||||||    
T  45678246 catcatcttaatcatcttgtatggactcatgcaacatagttaaataacaatagcagca 45678189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 30345076 - 30345007
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  30345076 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 30345007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 41531089 - 41531020
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  41531089 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 41531020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 23038054 - 23038108
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||| ||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  23038054 gactcatgcagcttggttaaataacaatagcagcataggcagattacaacaacag 23038108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 23187088 - 23187146
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| ||||||| ||||| ||| ||||||||| |||||||||||| |||| ||||    
T  23187088 cttattcatactcatggaacttggtttaataacaattgcagcataatcaaatcatatca 23187146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 23598351 - 23598409
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| ||||||| ||||| ||| ||||||||| |||||||||||| |||| ||||    
T  23598351 cttattcatactcatggaacttggtttaataacaattgcagcataatcaaatcatatca 23598409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 22758836 - 22758759
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| || |||||||   |||||||||||||   |||||||||||||||||||||  ||||| ||| ||||||    
T  22758836 catcatcttgatcatcttatatcgactcatgcaactagtttaaataacaatagcagcatagacagattacaacaacag 22758759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 1283410 - 1283479
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||| | || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  1283410 actcatgcaacttagattaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 1283479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 22105412 - 22105472
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||||| |||| ||||    
T  22105412 tcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagcaacata 22105472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 23040310 - 23040246
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataa 85  Q
    ||||||||||||| || | ||||  | |||||||||| |||||||||||||||| |||| |||||    
T  23040310 acatcatcatcttcatcaacttagaccgactcatgcagcttagttaaataacaacagcaacataa 23040246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 24716444 - 24716412
Alignment:
Q  220 cagttaacatcttaaataggtctcactattacc 252  Q
    |||||||||||||||||||||||||||| ||||    
T  24716444 cagttaacatcttaaataggtctcactactacc 24716412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 5e-46; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 36134074 - 36133965
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  36134074 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatccattcatctt 36133975  T
Q  122 caacaacttc 131  Q
    ||||||||||    
T  36133974 caacaacttc 36133965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 22634516 - 22634422
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22634516 cttattcagacgcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaatttcttg 22634422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 9556551 - 9556633
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9556551 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 9556633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 17810293 - 17810375
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17810293 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 17810375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 4561419 - 4561337
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  4561419 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaatttattttcaacaacttc 4561337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 14757507 - 14757425
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  14757507 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacaacttaatatcaattcattttcaacaacttc 14757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 1951851 - 1951762
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||||||||||||| ||||||    
T  1951851 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaatttcttg 1951762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 133
Target Start/End: Original strand, 27534047 - 27534131
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttctt 133  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||    
T  27534047 actcatgcaacttagtttaataacaataacagcataatcggatcatatcaacagcttaatatcaattcattttcaataacttctt 27534131  T

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Target: chr4; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 18222468 - 18222386
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| |||||||||||||||||    
T  18222468 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaa 18222386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 5757023 - 5756941
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| |||||||||||||||||||| |||||||||||||| | ||||||| ||||||| |||||||||||||||||||||    
T  5757023 actcatgtaacttagttaaataacaataacagcataatcagattatatcaacaacttaataccaattcattttcaacaacttc 5756941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 16488194 - 16488124
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16488194 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 16488124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 20157579 - 20157501
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    ||||||| ||||||| | |||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20157579 catcatcgtcttaatcaacttatatagactcatgcaaattagttaaataacaatagcagcataatcagatcacatcaac 20157501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 33742399 - 33742478
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaact 129  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| ||| ||||||| |||||||||||    
T  33742399 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttgataccaattca-tttcaacaact 33742478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 43256505 - 43256414
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||  ||||||||| ||||||| |||||||||| |||||    
T  43256505 cttattcatactcatgcaacttagttaaataacaattgtagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttg 43256414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 13813135 - 13813069
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagat 91  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||||    
T  13813135 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagat 13813069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 17152576 - 17152501
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||||||||||||||||| | |||||||||||| |||||||||  ||||||||| ||||||||||    
T  17152576 attcagactcatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaataacaattcattt 17152501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 18228943 - 18228861
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||  ||||| ||| |||||||||| ||||||    
T  18228943 attcagactcatgcaacttagttaaataaaaattgcagcataatcaaatcacatca--agcttcataacaattcatttccaacaa 18228861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 12570014 - 12570090
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||    
T  12570014 catcatcttaatcatcttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaaca 12570090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 16348780 - 16348697
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaat 108  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||    
T  16348780 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacagcataat 16348697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 16357068 - 16356985
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaat 108  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||    
T  16357068 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacagcataat 16356985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 3412811 - 3412869
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  3412811 cttattcatactcatgcaacttagtttaataacaatagcagcataatcaaatcacatca 3412869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 18236904 - 18236962
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  18236904 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca 18236962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 28569537 - 28569477
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  28569537 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaac 28569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 14708727 - 14708668
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  14708727 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 14708668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 26243746 - 26243666
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||| | |||||||||||| |||||||||  ||||||||| ||| ||||| ||||||| ||||||    
T  26243746 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaataacaaatcattctcaacaatttcttg 26243666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 36133906 - 36133852
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  36133906 cttagcatttcataatagcttcacagttcccagttaatatcttaaataggtctca 36133852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 23139296 - 23139369
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||||||||||||||||| | |||||||||||| |||||||||  ||||||||| ||| ||||| |||||||    
T  23139296 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaataacaaatcattctcaacaa 23139369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 15224807 - 15224866
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | || |||||||||||||||||||||| |||||||||||| ||||||||||    
T  15224807 cttattcatattcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 15224866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 16243493 - 16243401
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||   | |||||| ||| ||||| ||||||| ||||||    
T  16243493 cttattcatacacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttg 16243401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 25555503 - 25555550
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  25555503 gactcatgcaacttagttaaataacagcagcagcataatcagatcaca 25555550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 2014791 - 2014849
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||    
T  2014791 cttattcatacacatgcaacttagttaaataacatttgcagcataatcaaatcacatca 2014849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 15093775 - 15093853
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||||| ||||| |   ||||||||||||||||||||| |||||||||||||||   |||||||| |||||||    
T  15093775 catcatcttaatcatcttgtattgactcatgcaacttagttaaagaacaatagcagcatagaaagatcacaacaacagc 15093853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 15353402 - 15353348
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||| |||||    
T  15353402 agactcatgcaacttagttaaataacagcagcaacataatcagatcacagcaaca 15353348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 244
Target Start/End: Complemental strand, 43256089 - 43256051
Alignment:
Q  206 agcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43256089 agcttcacagttcccagttaacatcttaaataggtctca 43256051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 45938173 - 45938246
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||| ||||||||||||||| | |||||||||||| |||||||||  ||||||||| ||| ||||| |||||||    
T  45938173 catgcatcttagttaaataacatttgcagcataatcaaatcacatca--agcttaataacaaatcattctcaacaa 45938246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 11250655 - 11250608
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||    
T  11250655 gactcatgcaacttagttaaataacagcagcaacataatcagatcaca 11250608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 42997543 - 42997484
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | |||||||||| |||||||||||| | |||||||||||| ||||||||||    
T  42997543 cttattcataatcatgcaactcagttaaataacatttgcagcataatcaaatcacatcaa 42997484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 18602824 - 18602766
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| ||||||| ||||||||| | ||||||| |||||||||||| |||||||||    
T  18602824 cttattcatactcatgaaacttagtttagtaacaattgcagcataatcaaatcacatca 18602766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 5339076 - 5339020
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    ||||||||||| | |||||||||||||||| ||||| || ||||||||| |||||||    
T  5339076 agactcatgcatcatagttaaataacaataacagcacaagcagatcacaacaacagc 5339020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 10712874 - 10712943
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  10712874 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 10712943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 10926644 - 10926713
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  10926644 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 10926713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 18609396 - 18609340
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacat 96  Q
    |||||||| ||||||| ||||||||| | ||||||| |||||||||||| |||||||    
T  18609396 cttattcatactcatgaaacttagtttagtaacaattgcagcataatcaaatcacat 18609340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 23843501 - 23843537
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| ||||||||||||||||||||||||    
T  23843501 gactcatgcaacatagttaaataacaatagcagcata 23843537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 6899891 - 6899954
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||| || | ||||  | |||||||||| ||||||||||||||||||||| ||||    
T  6899891 acatcatcatcttcatcaacttagaccgactcatgcatcttagttaaataacaatagcaacata 6899954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 9530460 - 9530532
Alignment:
Q  53 atgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    ||||||||||||||||| ||| | |||||||||||| |||||||||  |||||||||  || ||||| |||||||    
T  9530460 atgcaacttagttaaatgacatttgcagcataatcaaatcacatca--agcttaataataaatcattctcaacaa 9530532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 15121917 - 15121858
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| |||||||   |||||||||||||| ||| |||||||||| |||||||    
T  15121917 catcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatatcagcata 15121858  T

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Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Complemental strand, 19757682 - 19757639
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  19757682 catgcaacttagttaaataacatttgcagcataatcaaatcaca 19757639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 19782124 - 19782167
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  19782124 catgcaacttagttaaataacatttgcagcataatcaaatcaca 19782167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 8574985 - 8574935
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    ||||||||||||||| ||||  | |||||||||| ||||||||||||||||    
T  8574985 tcatcatcttaattaacttagaccgactcatgcagcttagttaaataacaa 8574935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 18239581 - 18239523
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagca 82  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||||| |||||||    
T  18239581 tcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagcagca 18239523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 39706409 - 39706356
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  39706409 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 39706356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 1951699 - 1951651
Alignment:
Q  196 atttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||||||| |||||||||||||| ||||||| ||||| | |||||||||    
T  1951699 atttcataaaagcttcacagttctcagttaatatctttattaggtctca 1951651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 13569502 - 13569561
Alignment:
Q  25 catcatcttaattatcttat-tcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || ||||||| ||| ||||||||||| |||||||||||||||| |||||||    
T  13569502 catcatcttgatcatcttatatca-actcatgcaacatagttaaataacaataacagcata 13569561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 14954252 - 14954183
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||| ||||    
T  14954252 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaatttattt 14954183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 19242693 - 19242749
Alignment:
Q  18 tggacatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    ||||| ||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  19242693 tggacttcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 19242749  T

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Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 25689891 - 25689960
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||| ||||    
T  25689891 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaatttattt 25689960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 17410434 - 17410546
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatttt 121  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  17410434 catcatcattttaattatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacaacttaatatcaattcatctt 17410533  T
Q  122 caacaacttcttg 134  Q
    | |||||||||||    
T  17410534 cgacaacttcttg 17410546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 23535681 - 23535588
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  23535681 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattca-tttcaacaatttcttg 23535588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 15236865 - 15236783
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15236865 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 15236783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 19472805 - 19472723
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  19472805 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 19472723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 20295868 - 20295950
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  20295868 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 20295950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 24767665 - 24767588
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    ||||||||||||||| |||||||  ||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  24767665 catcatcatcttaatcatcttatatagatttatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 24767588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 21366781 - 21366705
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21366781 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaaca 21366705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 20911263 - 20911172
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||| |||||||||| |||||    
T  20911263 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttg 20911172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 127
Target Start/End: Original strand, 42805436 - 42805518
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||| |||||||||  ||||||||| |||||||||||||||||    
T  42805436 attcagactcatgcaacttggttaaataacatttgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaa 42805518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 18774219 - 18774308
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||  ||||||||| ||| ||||||||||||| ||||||    
T  18774219 attcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacatca--agcttaataacaaatcattttcaacaatttcttg 18774308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 18784062 - 18784150
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttctt 133  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||  ||||||||| ||| ||||||||||||| |||||    
T  18784062 attcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacatca--agcttaataacaaatcattttcaacaatttctt 18784150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 40723672 - 40723607
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaat 114  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  40723672 actcatgcaacttagtttaataacaatagcagcataatcggatcatatcaacaacttaatatcaat 40723607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 18355970 - 18356061
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||||||  || |||||| ||||||| |||||||||| |||||    
T  18355970 cttattcatactcatgcaacttagttaaataacaattgcaacataatcaaatcacatca--agtttaataacaattca-tttcaacaacatcttg 18356061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 1859093 - 1859017
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  1859093 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaaca 1859017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 20232568 - 20232649
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||| ||||||| ||||| ||||||||| |||||||||||| |||||||||  ||||||||| ||||||||| |||||||    
T  20232568 ttcagacttatgcaacatagtttaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattctcaacaa 20232649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 21340855 - 21340782
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatt 119  Q
    |||||||||||||||||||||||||||||| | |||||||||||| |||||||||  ||||||||| ||| |||||    
T  21340855 ttcagactcatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaataacaaatcatt 21340782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 26680604 - 26680652
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26680604 agactcatgcaacttagttaaataacaacagcagcataatcagatcaca 26680652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 26742835 - 26742754
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||||||||||||||||||||||||| | |||||||||||| |||||||||   |||||||| ||| ||||| |||||||    
T  26742835 ttcagactcatgcaacttagttaaataacatttgcagcataatcaaatcacatca--ggcttaataacaactcattctcaacaa 26742754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 26952211 - 26952259
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26952211 agactcatgcaacttagttaaataacaacagcagcataatcagatcaca 26952259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 123417 - 123346
Alignment:
Q  30 tcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||| |||||||||   ||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  123417 tcttatttatcttataatgactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaaca 123346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 21885282 - 21885223
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  21885282 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 21885223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 20805552 - 20805622
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  |||||||||    
T  20805552 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcaca 20805622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 23451371 - 23451424
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  23451371 gactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaaca 23451424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 17517320 - 17517240
Alignment:
Q  23 atcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||| ||||||||| | ||||  | |||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||    
T  17517320 atcaacatcttaatcaacttagactgactcatgcaacttagtttaataacaatagcagcataggcagattacatcaacagc 17517240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 20766974 - 20767050
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  || |||||| |||||    
T  20766974 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcaaatcacaacaaca 20767050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 23458592 - 23458668
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| || ||||||||||||||||| |||||    
T  23458592 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagaagcataatcagatcacaacaaca 23458668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 23462853 - 23462929
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| || ||||||||||||||||| |||||    
T  23462853 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagaagcataatcagatcacaacaaca 23462929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 23572084 - 23572160
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||||||| |||||||||| |||||||  ||||||||| |||||    
T  23572084 catcatcttaatcatcttatatggactcatgcaacttagttcaataacaataacagcataggcagatcacaacaaca 23572160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 26666219 - 26666138
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| ||||| |||  ||||||||| ||| ||||| |||||||    
T  26666219 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa 26666138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 26937816 - 26937735
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||| ||||| |||  ||||||||| ||| ||||| |||||||    
T  26937816 ttcagactcatgcaacatagtttaataacaattgcagcataatcaaatcacgtca--agcttaataacaaatcattctcaacaa 26937735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 31342169 - 31342217
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  31342169 agactcatgcaacttagttaaataacagcagcagcataatcagatcaca 31342217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 10752956 - 10753015
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||| | ||||||||||    
T  10752956 cttattcatactcttgcaacttagttaaataacaattgcagcataattaaatcacatcaa 10753015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 12028659 - 12028612
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  12028659 gactcatgcaacttagttaaataacagcagcagcataatcagatcaca 12028612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 17919245 - 17919198
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  17919245 gactcatgcaacttagttaaataacagcagcagcataatcagatcaca 17919198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 4036232 - 4036290
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  4036232 cttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatca 4036290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 23535533 - 23535479
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||||||||||||||||| || |||| |||||||| ||||||||    
T  23535533 cttagcatttcatagaagcttcacagttctcatttaatatcttaaacaggtctca 23535479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 24221899 - 24221953
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||| |||||    
T  24221899 agactcatgcaacctagttaaataacagcagcagcataatcagatcacaacaaca 24221953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 25229499 - 25229441
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  25229499 cttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatca 25229441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 25293655 - 25293597
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  25293655 cttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatca 25293597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 23512098 - 23512174
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   ||||||||||  |||||||||||||||||||||||||  |||||| ||||||||    
T  23512098 catcatcttattcatcttataatgactcatgcactttagttaaataacaatagcagcataggcagatcgcatcaaca 23512174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 24533136 - 24533055
Alignment:
Q  44 ttcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||||||||||| ||||| ||||||||| ||| |||||||| ||||| |||  ||||||||| ||| ||||| |||||||    
T  24533136 ttcagactcatgcaacatagtttaataacaattgcaacataatcaaatcacgtca--agcttaataacaaatcattctcaacaa 24533055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 26172488 - 26172536
Alignment:
Q  51 tcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  26172488 tcattcaacttagttaaataacaattgcagcataatcaaatcacatcaa 26172536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 21873254 - 21873313
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||| | |||||||   ||||||||||||||||||||||||||| |||||||||    
T  21873254 catcatcttattcatcttatattgactcatgcaacttagttaaataacaaaagcagcata 21873313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 18356505 - 18356543
Alignment:
Q  206 agcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  18356505 agcttcacagttctcagttaacatcttaaataggtctca 18356543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 23201383 - 23201436
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  23201383 gactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 23201436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 23501472 - 23501415
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagca 82  Q
    ||||||||| || |||||||   |||||||||||||| ||||||||||||||||||||    
T  23501472 catcatcttgatcatcttatatcgactcatgcaacttggttaaataacaatagcagca 23501415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 10753385 - 10753454
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  10753385 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 10753454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 14079149 - 14079208
Alignment:
Q  25 catcatcttaattatcttat-tcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| ||||||| ||| | ||||||||| ||||||||||||||||||||||||    
T  14079149 catcatcttaatcatcttatatca-attcatgcaacatagttaaataacaatagcagcata 14079208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 2154776 - 2154721
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    ||||||||||||| | ||||  | |||||||||| |||||||||||||||||||||    
T  2154776 tcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaatagca 2154721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 16674177 - 16674220
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  16674177 catgcaacttagttaaataacatttgcagcataatcaaatcaca 16674220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 21366601 - 21366558
Alignment:
Q  198 ttcatagaagcttcacagttcccagttaacatcttaaataggtc 241  Q
    ||||||| |||||||||| || ||||||||||||||||||||||    
T  21366601 ttcatagcagcttcacagatctcagttaacatcttaaataggtc 21366558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 22032323 - 22032382
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| |||||||   |||||||||||||| ||| ||||||||||||| ||||    
T  22032323 catcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcaacata 22032382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 22757148 - 22757195
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||| |||||||||||||||||  |||| |||||||||||||||    
T  22757148 gactcatgtaacttagttaaataacagcagcaacataatcagatcaca 22757195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 31061068 - 31061123
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    ||||||||||||| | ||||  | ||||||||||||||||||||||||||| ||||    
T  31061068 tcatcatcttaatcaacttagaccgactcatgcaacttagttaaataacaacagca 31061123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 33409253 - 33409296
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  33409253 catgcaacttagttaaataacatttgcagcataatcaaatcaca 33409296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 42245527 - 42245472
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    ||||||||||||| | ||||  | ||||||||||||||||||||||||||| ||||    
T  42245527 tcatcatcttaatcaacttagaccgactcatgcaacttagttaaataacaacagca 42245472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 17718520 - 17718474
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||||||||||||||||| | || ||||||||| |||||||||    
T  17718520 catgcaacttagttaaataacatttgccgcataatcaaatcacatca 17718474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 20910744 - 20910690
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||||||||||| |  ||||||||||| | ||| |||||||||||||||||||||    
T  20910744 cttagcatttcacaatagcttcacagtcctcagataacatcttaaataggtctca 20910690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 26704098 - 26704152
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||| ||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  26704098 gactcatgcagcttggttaaataacaatagcagcataggcagattacaacaacag 26704152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 26973831 - 26973885
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||| ||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  26973831 gactcatgcagcttggttaaataacaatagcagcataggcagattacaacaacag 26973885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 21329618 - 21329565
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  21329618 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 21329565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 18770118 - 18770042
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||  ||||||||||||| ||||  ||||| ||| |||||    
T  18770118 catcatcttaatcatcttatatcgactcatgcaacttggtcgaataacaatagcaacataggcagattacaacaaca 18770042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 23451549 - 23451581
Alignment:
Q  220 cagttaacatcttaaataggtctcactattacc 252  Q
    |||||||||||||||||||||||||||| ||||    
T  23451549 cagttaacatcttaaataggtctcactactacc 23451581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 23458793 - 23458825
Alignment:
Q  220 cagttaacatcttaaataggtctcactattacc 252  Q
    |||||||||||||||||||||||||||| ||||    
T  23458793 cagttaacatcttaaataggtctcactactacc 23458825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 23463054 - 23463086
Alignment:
Q  220 cagttaacatcttaaataggtctcactattacc 252  Q
    |||||||||||||||||||||||||||| ||||    
T  23463054 cagttaacatcttaaataggtctcactactacc 23463086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 82; Significance: 8e-39; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 65613 - 65528
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  65613 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttcttg 65528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 61697 - 61615
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  61697 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 61615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 12763 - 12839
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||||||||||||||||||| |||||||||| |||||||  ||||||||| |||||    
T  12763 catcatcttaatcatcttatatagactcatgcaacttagttcaataacaataacagcataggcagatcacaacaaca 12839  T

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Target: scaffold0029; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 80307 - 80366
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  80307 cttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 80366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 80736 - 80805
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| ||||||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  80736 actcatgcaacttagtttaataacaattgcagcataatcaattcatatca--agcttaataacaattcattt 80805  T

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Target: scaffold0525 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 3960 - 3878
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3960 actcatgcaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 3878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 79; Significance: 5e-37; HSPs: 4)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 12916 - 13010
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  12916 cttattcagactcatgcaacttagttaattaacaataggagcataatcagatcacatcaacagcttaatatcaattcatcttcaacaatttcttg 13010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 19200 - 19294
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  19200 cttattcagactcatgcaacttagttaattaacaataggagcataatcagatcacatcaacagcttaatatcaattcatcttcaacaatttcttg 19294  T

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Target: scaffold0044; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 62273 - 62331
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||    
T  62273 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatca 62331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 13066 - 13120
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  |||| |||||||| ||||||| |||||||||||||||||    
T  13066 cttagcatttcataatagctccacagttctcagttaatatcttaaataggtctca 13120  T

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Target: scaffold0349 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 12443 - 12525
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12443 actcatgtaacttagttaaataacaatagcagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 12525  T

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Target: scaffold0228 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 18726 - 18632
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || ||||||    
T  18726 cttattcagactcatgcaacttaggtaaataacaatagcagcataatcagatcatatcaacagcttaataacaattcattttcaataatttcttg 18632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 18576 - 18522
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||||||||||||| |||||||||||||| || | || ||||| |||||||||||    
T  18576 cttagcatttcataaaagcttcacagttctcattcaatatctttaataggtctca 18522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 43251834 - 43251916
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43251834 actcatgcaacttagttaaataacaataacagcataatcagatcatatcaacagcttaatatcaattcattttcaacaacttc 43251916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 19278368 - 19278286
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  19278368 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 19278286  T

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Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 21972670 - 21972588
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  21972670 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 21972588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 21976755 - 21976673
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  21976755 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 21976673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 16231565 - 16231476
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||||||||||||| ||||||    
T  16231565 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaaattcttg 16231476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 21387086 - 21387177
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||| |||||||||| |||||    
T  21387086 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattca-tttcaacaacatcttg 21387177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 22044900 - 22044989
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||  |||||||| |||||| ||||| |||||||||  ||||||||| ||||||||||||||||| ||||||    
T  22044900 attcagactcatgcaacttagtttgataacaattgcagcacaatcaaatcacatca--agcttaataacaattcattttcaacaatttcttg 22044989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 30643408 - 30643332
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30643408 catcatcttaatcatcttgaatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaaca 30643332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 21383666 - 21383756
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttctt 133  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||||||  ||||||||| ||||||| |||||||||| ||||    
T  21383666 cttattcatactcatgcaacttagttaaataacaattgcaacataatcaaatcacatca--agcttaataacaattca-tttcaacaacatctt 21383756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 15603111 - 15603055
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  15603111 agactcatgcaacttggttaaataacaaaagcagcataatcagatcacatcaacagc 15603055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 24755714 - 24755790
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||    
T  24755714 catcatcttaatcatcttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaaca 24755790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 14398201 - 14398123
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| ||| |||  | ||||||||| ||||||||||    
T  14398201 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcgcat--aaagcttaataacaattcattt 14398123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 15611563 - 15611507
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    ||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  15611563 agactcatgcaacttggttaaataacaaaaccagcataatcagatcacatcaacagc 15611507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 18678221 - 18678141
Alignment:
Q  23 atcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||| ||||||||| | ||||  | |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  18678221 atcaacatcttaatcaacttagactgactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacagc 18678141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 32121759 - 32121814
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  32121759 gactcatgcaacttagttaaataacaatagcagcataggcagattacatcaacagc 32121814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 22010769 - 22010716
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  22010769 agactcatgcaacttggttaaataacaaaagcagcataatcagatcacaacaac 22010716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 39095018 - 39094965
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  39095018 gactcatgcaacttagttaaataacaaaagcagcatattcagatcacaacaaca 39094965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 377271 - 377347
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||| |  | ||||||||||| |||||||||||||||||||||| || ||||||||| |||||    
T  377271 catcatcttaatcatcttgtatatactcatgcaacatagttaaataacaatagcagcacaagcagatcacaacaaca 377347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 16410347 - 16410287
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaat 108  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||| ||||    
T  16410347 gactcatgcaacttagtgaaataacaatagcagcataggcagatcacaacaacagcataat 16410287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 16861441 - 16861365
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||  |||||||||||| |||||||||||||||||||| |||||    
T  16861441 catcatcttattcatcttataatgactcatgcaactcggttaaataacaaaagcagcataatcagatcacaacaaca 16861365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 17055472 - 17055412
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| || ||||||||    
T  17055472 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaataacatcaac 17055412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 23834188 - 23834277
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||| ||||| ||||||||| ||| |||| ||| |||||||||  ||||||||| ||| ||||| ||||||| ||||||    
T  23834188 attcagactcatgcaacatagtttaataacaattgcatcatagtcaaatcacatca--agcttaataacaaatcattctcaacaatttcttg 23834277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 17926822 - 17926739
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaat 108  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||| ||||||  ||||||| | ||||||| ||||    
T  17926822 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagtagcataggcagatcaaaacaacagcataat 17926739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 20466157 - 20466079
Alignment:
Q  25 catcatcttaattatcttattca--gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  |  ||||||||||||||||||||||||||||||||| |||  ||||||||| |||||    
T  20466157 catcatcttaatcatcttatatatagactcatgcaacttagttaaataacaatagcagtataggcagatcacaacaaca 20466079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 20856518 - 20856472
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20856518 gactcatgcaacttagttaaataacaa-agcagcataatcagatcaca 20856472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 32598691 - 32598750
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  32598691 cttattcataatcatgcaacttagttaaataacaattgcagcacaatcaaatcacatcaa 32598750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 32605223 - 32605282
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  32605223 cttattcataatcatgcaacttagttaaataacaattgcagcacaatcaaatcacatcaa 32605282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 22111904 - 22111954
Alignment:
Q  81 cataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  22111904 cataatcagattatatcaacagcttaataccaattcattttcaacaacttc 22111954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 23776952 - 23776882
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||| | |||||||   ||||||||||||||||||||||||| |||||||||||  |||||||||    
T  23776952 catcatcttattcatcttatattgactcatgcaacttagttaaataactatagcagcataggcagatcaca 23776882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 16184720 - 16184796
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||| |||||||| || |||||| |||||||||||||||| || |||||| |||||    
T  16184720 catcatcttaatcatcttatatagaatcatgcaagttggttaaacaacaatagcagcataagcatatcacaacaaca 16184796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 17354060 - 17353984
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||| || |||||||   |||||||||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  17354060 catcatcttgatcatcttatatcgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 17353984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 17828663 - 17828590
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||||||||||| ||||| | |||||||||||| |||||||||  ||||||||| ||| ||||| |||||||    
T  17828663 catgcaacttagttaattaacatttgcagcataatcaaatcacatca--agcttaataacaaatcattctcaacaa 17828590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 21162175 - 21162099
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||||||||||||| |||| |||||||  ||||||||| |||||    
T  21162175 catcatcttattcatcttatattgactcatgcaacttagttaaataataataacagcataggcagatcacaacaaca 21162099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 21168848 - 21168772
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||||||||||||| |||| |||||||  ||||||||| |||||    
T  21168848 catcatcttattcatcttatattgactcatgcaacttagttaaataataataacagcataggcagatcacaacaaca 21168772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 15531914 - 15531994
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||| | |||||||||||| |||||| ||   | |||||| ||||||||| ||||||| ||||||    
T  15531914 catgcaacttagttaaataacatttgcagcataatcaaatcacaaca--ggtttaataacaattcattctcaacaatttcttg 15531994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 15538473 - 15538553
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||| | |||||||||||| |||||| ||   | |||||| ||||||||| ||||||| ||||||    
T  15538473 catgcaacttagttaaataacatttgcagcataatcaaatcacaaca--ggtttaataacaattcattctcaacaatttcttg 15538553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 19259685 - 19259632
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||| ||||||||||||||| ||||||| ||| ||||| |||||    
T  19259685 gactcatgcaacttggttaaataacaatagtagcataagcagttcacaacaaca 19259632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 18862730 - 18862661
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  18862730 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 18862661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 21410971 - 21411040
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  21410971 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 21411040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 21805463 - 21805532
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  21805463 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 21805532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 21828099 - 21828030
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  21828099 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 21828030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 23648554 - 23648633
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||| ||||||||| | ||||  | |||||||||||||||||||| ||||||||||| ||||  ||||| ||| |||||    
T  23648554 catcaacatcttaatcaacttagactgactcatgcaacttagttaattaacaatagcaacataggcagattacaacaaca 23648633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Complemental strand, 23847096 - 23847053
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  23847096 catgcaacttagttaaataacatttgcagcataatcaaatcaca 23847053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 16231419 - 16231365
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||| ||||||||| |||||||||||||| |||| || ||||| |||||||||||    
T  16231419 cttaacatttcataaaagcttcacagttctcagtcaatatctttaataggtctca 16231365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 24445587 - 24445541
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||||||||||||||||| |  ||||||||||| |||||||||    
T  24445587 catgcaacttagttaaataacatttacagcataatcaaatcacatca 24445541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 6520368 - 6520421
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  6520368 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 6520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 6759255 - 6759316
Alignment:
Q  18 tggacatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    |||||||||||||||| || | ||||  | |||||||||| |||||||||||||||| ||||    
T  6759255 tggacatcatcatcttcatcaacttagaccgactcatgcagcttagttaaataacaacagca 6759316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 19983119 - 19983152
Alignment:
Q  51 tcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| ||||||||||||||||||||||||    
T  19983119 tcatgcaacatagttaaataacaatagcagcata 19983152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 38855372 - 38855319
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  38855372 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 38855319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 5186 - 5104
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  5186 actcatgcaacttagttaaataacaatagcagcataatcagctcatatcaacaacttaatatcaattcattttcaacaacttc 5104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 2766 - 2673
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  2766 cttattcagactcatgcaacttagttaattaacaattgcagcataatcagatcacatcaacagcttaataacaattca-tttcaacaatttcttg 2673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 2617 - 2563
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||| |||||| |||||||||| ||| ||||||| |||||||||||||||||    
T  2617 cttagcagttcataaaagcttcacaattctcagttaatatcttaaataggtctca 2563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 228466 - 228374
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||| ||||||||||||||| | ||||||    
T  228466 cttattcagactcatgcaacttagttaaataacaattgcagcataatcagatcacatca--agcttaataacaattcattttcaactatttcttg 228374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 228317 - 228263
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||||||||||||| || ||||||||||| ||||||| ||||||| |||||||||    
T  228317 cttagcatttcataaaaacttcacagttctcagttaatatcttaagtaggtctca 228263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 58804 - 58722
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  58804 actcatgtaacttagttaaataacaatagcagcataatcagattatatcaacagcttaataccaattcattttcaacaacttc 58722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 67; Significance: 7e-30; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 173304 - 173395
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttctt 133  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||||||||||||| |||||    
T  173304 cttattcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaatttctt 173395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 422648 - 422572
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||| | |  |||||||||||||||||||||||||||  ||||||||||| |||||||| |||||    
T  422648 catcatcttaatcatcatgtatagactcatgcaacttagttaaataacagcagcagcataattagatcacaacaaca 422572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 85742 - 85692
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    ||||||||||||| ||||||  | |||||||||| ||||||||||||||||    
T  85742 tcatcatcttaatcatcttagaccgactcatgcagcttagttaaataacaa 85692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 173452 - 173505
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctc 243  Q
    ||||||||||||||  ||||||| ||||| ||||||| ||||| ||||||||||    
T  173452 cttagcatttcataatagcttcaaagttctcagttaatatctttaataggtctc 173505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 159 - 235
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  159 catcatcttaatcatcttatatagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 36027 - 35946
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttc 131  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | |||||||||||||    
T  36027 actcatgcaacttagttaaataacaatagcagcataattagatcatatcaacagcttaatatcaatt-aatttcaacaacttc 35946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 6957 - 7016
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    ||||||||  |||||||||| ||||| ||||||||| |||||||||||| ||||||||||    
T  6957 cttattcatgctcatgcaacatagtttaataacaattgcagcataatcaaatcacatcaa 7016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 11395 - 11336
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | |||||||||| |||||||||||| | ||||||| |||| ||||||||||    
T  11395 cttattcataatcatgcaactcagttaaataacatttgcagcattatcaaatcacatcaa 11336  T

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Target: scaffold0334 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 18450 - 18368
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| |||||||||||||||||    
T  18450 attcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattttcaacaa 18368  T

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Target: scaffold0168 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 134
Target Start/End: Complemental strand, 3620 - 3531
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||  ||||||||| ||||||||||||||||| ||||||    
T  3620 attcagactcatgcaacttagttaaataacaattgcagtataatcaaatcacatca--agcttaataacaattcattttcaacaatttcttg 3531  T

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Target: scaffold0120 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 20110 - 20018
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||    
T  20110 cttattcagattcatgcaacttagtttaataacaattgcaacataatcagatcacatca--agcttaataacaattcattttcaacaatttcttg 20018  T

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Target: scaffold0216 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 17228 - 17150
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||||| ||||| |  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17228 catcatcttaatcatcttgtatagactcatggaacttagttaaataacaatagcagcataatcagatcacatcaacagc 17150  T

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Target: scaffold0166 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 10162 - 10085
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    ||||||||||||||| |||||||  ||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  10162 catcatcatcttaatcatcttatatagatttatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 10085  T

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Target: scaffold0761 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 6425 - 6349
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6425 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaaca 6349  T

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Target: scaffold0327 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 289 - 365
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  289 catcatcttaatcatcttatatagactcatgcaacttagttaaataacaaaagcagcataatcagatcacaacaaca 365  T

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Target: scaffold0124 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 42627 - 42703
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42627 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaaca 42703  T

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Target: scaffold0022 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 73883 - 73807
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  73883 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaaca 73807  T

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Target: scaffold0676 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 4430 - 4513
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaat 108  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  4430 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatggcagcataatcagatcacaacaacagcataat 4513  T

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Target: scaffold0676; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 471 - 541
Alignment:
Q  49 actcatgcaactt-agttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||| |||||||||||||||||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  471 actcatgcaactttagttaaataacaatagcagcataatcaattcatatca--agcttaataacaattcattt 541  T

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Target: scaffold0676; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 4603 - 4665
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctcactattacc 252  Q
    ||||||||||||||  || |||||||||  |||||||| ||||| ||||||||||||| ||||    
T  4603 cttagcatttcataatagtttcacagtttacagttaacttcttatataggtctcactactacc 4665  T

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Target: scaffold0393 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 1494 - 1569
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||||||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1494 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaac 1569  T

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Target: scaffold0393; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 1674 - 1717
Alignment:
Q  198 ttcatagaagcttcacagttcccagttaacatcttaaataggtc 241  Q
    ||||||| |||||||||| || ||||||||||||||||||||||    
T  1674 ttcatagcagcttcacagatctcagttaacatcttaaataggtc 1717  T

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Target: scaffold1296 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 393 - 463
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  393 catcatcttaatcatcttgtatagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 463  T

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Target: scaffold1052 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 2913 - 2981
Alignment:
Q  33 taattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2913 taataatcttatatagacttatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 2981  T

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Target: scaffold0476 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 5608 - 5702
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-------cttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||       | |||||||||||||||||||||||| |||||    
T  5608 agactcatgcaacttagttaaataacagtagcagcataatcagatcacaacaacagcatagttcataatatcaattcattttcaacaacatcttg 5702  T

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Target: scaffold0476; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 6803 - 6897
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag-------cttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||       | |||||||||||||||||||||||| |||||    
T  6803 agactcatgcaacttagttaaataacagtagcagcataatcagatcacaacaacagcatagttcataatatcaattcattttcaacaacatcttg 6897  T

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Target: scaffold0299 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 6693 - 6784
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| ||| |||||  ||||||||| ||||||| |||||||||| |||||    
T  6693 cttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatctcatca--agcttaataacaattca-tttcaacaacatcttg 6784  T

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Target: scaffold0104 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 9513 - 9591
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||||| | |||||||   ||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  9513 catcatcttattcatcttataatgactcatgcaacttagttaaataacaataacaacataatcagatcacatcaacagc 9591  T

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Target: scaffold0104; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 1830 - 1913
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaat 108  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||| ||||||||  ||||||||| ||||||| ||||    
T  1830 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatggcagcataggcagatcacaacaacagcataat 1913  T

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Target: scaffold0615 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 2178 - 2125
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2178 gactcatgcaacttagttaaataacaatagcagcataatcagatcacaacaaca 2125  T

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Target: scaffold0293 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 20557 - 20479
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||| ||||||||||    
T  20557 cttattcatattcatgcaacttagttaaataacaattgcagcataatcaaatcacatca--agcttaataacaattcattt 20479  T

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Target: scaffold0177 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 13568 - 13487
Alignment:
Q  53 atgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| |||||| |||||||| ||| |||||||||||||||||||| ||||||||||||  || |||||||||||||||    
T  13568 atgcaactcagttaattaacaataacagaataatcagatcacatcaacaacttaatatcaatcgatcttcaacaacttcttg 13487  T

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Target: scaffold0177; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 13431 - 13377
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||||  |||| |||||||  ||||||| |||||||||||||||||    
T  13431 cttagcatttcataatagctacacagttatcagttaatatcttaaataggtctca 13377  T

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Target: scaffold0093 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 4921 - 4841
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagctt 105  Q
    |||||||||||| |||||||   |||||||||||||||||||||||| ||||||||||||  ||||||||| |||||||||    
T  4921 catcatcttaatcatcttatattgactcatgcaacttagttaaataataatagcagcataggcagatcacaacaacagctt 4841  T

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Target: scaffold0056 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 14203 - 14127
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||  ||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||    
T  14203 catcatcttaatcatcttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaaca 14127  T

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Target: scaffold0023 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 38596 - 38520
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  38596 catcatcttaatcatcttatattgactcatgcaacttagttaaataacaatagcagcatagacagatcacaacaaca 38520  T

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Target: scaffold0079 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 44081 - 44164
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaat 108  Q
    |||||||||| | |||||||   |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| ||||    
T  44081 catcatcttattcatcttataatgactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacagcataat 44164  T

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Target: scaffold0051 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 30897 - 30988
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||| ||| |||||  ||||||||| ||||||| |||||||||| |||||    
T  30897 cttattcatactcatgcaacttagttaaataacaattacagcataatcaaatctcatca--agcttaataacaattca-tttcaacaacatcttg 30988  T

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Target: scaffold0346 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 15087 - 15157
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    |||||||||||| ||||| |  | |||||||||||||||||||||||||||| ||||||||||||||||||    
T  15087 catcatcttaatcatcttgtatacactcatgcaacttagttaaataacaataacagcataatcagatcaca 15157  T

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Target: scaffold0405 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 9759 - 9681
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    |||||| ||||||||||||| ||||||| ||||||| ||||| ||||||||||||||||  ||||||||| ||||||||||    
T  9759 cttatttagactcatgcaacatagttaattaacaattgcagcgtaatcagatcacatca--agcttaataacaattcattt 9681  T

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Target: scaffold0405; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 9603 - 9555
Alignment:
Q  196 atttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    |||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  9603 atttcataaaagcttcacagttctcagttaatatcttaaataggtctca 9555  T

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Target: scaffold0671 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 6095 - 6171
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||||||||||||||||||||||  ||||||||| |||||    
T  6095 catcatcttaatcatcttatattgactcatgcaacttggttaaataacaatagcagcataggcagatcacaacaaca 6171  T

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Target: scaffold0550 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 7471 - 7547
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||| | |  |||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  7471 catcatcttaatcatcatgtatagactcatgcaacttagttaaataacagcagcagcataatcagatcacagcaaca 7547  T

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Target: scaffold0080 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 18774 - 18695
Alignment:
Q  25 catcatcttaattatcttattca--gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||||| |||||||  |  |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  18774 catcatcttaatcatcttatatatagactcatgcaacttagttaaataacaatagcagcataggcagatcacaacaacag 18695  T

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Target: scaffold0042 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 35036 - 34960
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| || ||||  ||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||    
T  35036 catcatcttaatcattttatatagactcatgcatcatagttaaataacaatagcagcataagcagatcacaacaaca 34960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 63878 - 63958
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||| | |||||||||||| |||||| ||   | |||||| ||||||||| ||||||| ||||||    
T  63878 catgcaacttagttaaataacatttgcagcataatcaaatcacaaca--ggtttaataacaattcattctcaacaatttcttg 63958  T

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Target: scaffold0042; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 75762 - 75842
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||||||||||||||||| |  ||||||||||| |||||| ||   | |||||| ||||||||| ||||||| ||||||    
T  75762 catgcaacttagttaaataacattttcagcataatcaaatcacaaca--ggtttaataacaattcattctcaacaatttcttg 75842  T

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Target: scaffold0003 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 414167 - 414091
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||| | |  |||| ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  414167 catcatcttaatcatcatgtatagacgcatgcaacttagttaaataacaacagcagcataatcagatcacaacaaca 414091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 71083 - 71129
Alignment:
Q  42 tattcagactcatgcaacttagttaaataacaatagcagcataatca 88  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  71083 tattcatactcatgcaacttagttaaataacaattgcagcataatca 71129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 139736 - 139809
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaa 127  Q
    |||||||||||||||||||||| | |||||||||||| |||||||||  ||||||| | ||| ||||| |||||||    
T  139736 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaacaacaaatcattctcaacaa 139809  T

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Target: scaffold0003; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 244
Target Start/End: Original strand, 71491 - 71529
Alignment:
Q  206 agcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  71491 agcttcacagttctcagttaacatcttaaataggtctca 71529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 9347 - 9406
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  9347 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 9406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 897 - 980
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaat 108  Q
    |||||||||| | |||||||   |||||||||||||||||| ||||||||||||||||||  ||||||||| ||||||| ||||    
T  897 catcatcttattcatcttataatgactcatgcaacttagttcaataacaatagcagcataggcagatcacaacaacagcataat 980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 2832 - 2907
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||||||||| ||||| |  ||||||||||||| |||||||||||||||||||||| || ||||||||| ||||    
T  2832 catcatcttaatcatcttgtatagactcatgcaacatagttaaataacaatagcagcacaagcagatcacaacaac 2907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 6498 - 6573
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||||||||| ||||| |  ||||||||||||| |||||||||||||||||||||| || ||||||||| ||||    
T  6498 catcatcttaatcatcttgtatagactcatgcaacatagttaaataacaatagcagcacaagcagatcacaacaac 6573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 77264 - 77205
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  77264 cttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 77205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 18236 - 18295
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || |||||||   |||||||||||| ||||||| ||||||||||||||||    
T  18236 catcatcttgatcatcttatatcgactcatgcaacatagttaattaacaatagcagcata 18295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 1584 - 1530
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  1584 agactcatgcaacttagttaaataaccaaagcagcataatcagatcacaacaaca 1530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 6093 - 6035
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||||||| |||||||||    
T  6093 cttattcatactcatgcaacttagtttaataacaattgcagcataatcaaatcacatca 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 207942 - 207880
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||| | ||||||||||||||||||||||||| |||||||||||| |||| ||||||||    
T  207942 cttattcatattcatgcaacttagttaaataacaattgcagcataatcatatcatatcaacag 207880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 25059 - 24980
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaa 124  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||| |||||||||  ||||||||| |||  |||||||||    
T  25059 attcagactcatgcaactcagtttaataacaattgcagcataatcaaatcacatca--agcttaataacaacacattttcaa 24980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 189462 - 189393
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  189462 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 189393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 35605 - 35552
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  35605 gactcatgcaacttagttaaataacagcagcagcataatcagatcacaacaaca 35552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 19826 - 19773
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  19826 gactcatgcaacttagttaaataacaaaagcagcatattcagatcacaacaaca 19773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 15304 - 15251
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||| |||||    
T  15304 gactcatgcaacttagttaaataacaaaagcatcatattcagatcacaacaaca 15251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 193070 - 193034
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||||||||||| |||||| |||||||||    
T  193070 gactcatgcaacttagttaattaacaacagcagcata 193034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 69794 - 69871
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| || ||||||| | |||||||||||||| ||||||||||||||||||||||  ||||| ||| ||||||    
T  69794 catcatcttgatcatcttataccgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaacag 69871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 10528 - 10474
Alignment:
Q  190 cttagcatttcatagaagcttcacagttcccagttaacatcttaaataggtctca 244  Q
    ||||| ||||||||  ||||||||||||| ||||||| |||||||||||||||||    
T  10528 cttagtatttcataatagcttcacagttctcagttaatatcttaaataggtctca 10474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 21920 - 21844
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  21920 catcatcttaatcatcttatatcgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 21844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 29812 - 29736
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  29812 catcatcttaatcatcttatatcgactcatgcaacttggttaaataacaatagcagcataggcagattacaacaaca 29736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 14664 - 14740
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   ||||||| |||||| ||||||||||||||||||||||  ||||||||| |||||    
T  14664 catcatcttaatcatcttatattgactcatacaacttggttaaataacaatagcagcataggcagatcacaacaaca 14740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 23679 - 23755
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   ||||||| |||||| ||||||||||||||||||||||  ||||||||| |||||    
T  23679 catcatcttaatcatcttatattgactcatacaacttggttaaataacaatagcagcataggcagatcacaacaaca 23755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 39103 - 39179
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   ||||||| |||||| ||||||||||||||||||||||  ||||||||| |||||    
T  39103 catcatcttaatcatcttatattgactcatacaacttggttaaataacaatagcagcataggcagatcacaacaaca 39179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 30859 - 30783
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||| | |||||||   |||||||||||||| |||||||||||| |||||||||||| ||||||| |||||    
T  30859 catcatcttattcatcttataatgactcatgcaacttggttaaataacaaaagcagcataatcggatcacaacaaca 30783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 1889 - 1948
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  1889 cttattcataatcatgcaacttagttaaatcacaattgcagcataatcaaatcacatcaa 1948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 8583 - 8630
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  8583 gactcatgcaacttagttaaataacagcagcagcataatcagatcaca 8630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 15350 - 15409
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | | ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  15350 cttattcataattatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa 15409  T

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Target: scaffold0111 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 8512 - 8571
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  8512 cttattcataatcatgcaacttagttaaataacaattgcaacataatcaaatcacatcaa 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 15656 - 15715
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | ||||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  15656 cttattcataatcatgcaacttagttaaataacaattgcaacataatcaaatcacatcaa 15715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 9916 - 10008
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| || |||||||||||||||||||||| | |||||||||||| |||||||||   | |||||| ||| ||||| ||||||| ||||||    
T  9916 cttattcatacacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--ggtttaataacaaatcattctcaacaatttcttg 10008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 4551 - 4587
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||||||||||||||||||||| | |||||||    
T  4551 gactcatgcaacttagttaaataacaacaacagcata 4587  T

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Target: scaffold0037 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 80869 - 80810
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||| | ||||||||||    
T  80869 cttattcatactcttgcaacttagttaaataacaattgcagcataattaaatcacatcaa 80810  T

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Target: scaffold1552 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 381 - 439
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatca 98  Q
    |||||||| | |||||||||||| |||||||||||| |||||||||||| |||||||||    
T  381 cttattcataatcatgcaacttaattaaataacaattgcagcataatcaaatcacatca 439  T

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Target: scaffold0439 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 2531 - 2477
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||    
T  2531 agactcatgcaatttagttaaataacagcagcagcataatcagatcacaacaaca 2477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 10391 - 10337
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||| |||||    
T  10391 agactcatgcaatttagttaaataacagcagcagcataatcagatcacaacaaca 10337  T

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Target: scaffold0342 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 7364 - 7311
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||||| |||||    
T  7364 gactcatgcaacttagttaaataacagcagcaacataatcagatcacaacaaca 7311  T

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Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 16442 - 16389
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||||||||||||||  || |||||| |||||    
T  16442 gactcatgcaacttagttaaataacaatagcagcataggcatatcacaacaaca 16389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 7204 - 7128
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||| |  |||||||||| || |||||||||||||||||||||| |  ||||||||| |||||    
T  7204 catcatcttaatcatcttgtatagactcatgcgacatagttaaataacaatagcagcacaggcagatcacaacaaca 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 16756 - 16696
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaac 100  Q
    |||||||| | |||||| |||||||||||||||||| |||||||||||| |||| ||||||    
T  16756 cttattcataatcatgcgacttagttaaataacaattgcagcataatcaaatcatatcaac 16696  T

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Target: scaffold0010 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 23232 - 23321
Alignment:
Q  43 attcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    ||||||||||||| ||| ||||| ||||| ||| ||||| |||||| |||||||||  ||||||||| ||| ||||| ||||||| ||||||    
T  23232 attcagactcatgaaacatagtttaataataattgcagcttaatcaaatcacatca--agcttaataacaaatcattctcaacaatttcttg 23321  T

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Target: scaffold1220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 1817 - 1868
Alignment:
Q  50 ctcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||||||||||||||||  |||||||||||||| |||| |||||    
T  1817 ctcatgcaacttagttaaataacaaaggcagcataatcagaccacaacaaca 1868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 6350 - 6291
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    ||||||||  |||||||||| ||||| ||||||||| |||||||||||| ||||||||||    
T  6350 cttattcatgctcatgcaacatagtttaataacaattgcagcataatcaaatcacatcaa 6291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 1912 - 1971
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaa 99  Q
    |||||||| | |||||||||| |||||||||||| | ||||||| |||| ||||||||||    
T  1912 cttattcataatcatgcaactcagttaaataacatttgcagcattatcaaatcacatcaa 1971  T

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Target: scaffold0410 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 2191 - 2238
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  2191 gactcatgcaacttagttaaataacagcagcagcataatcaaatcaca 2238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 15796 - 15737
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || |||||||   |||||||||||||| ||||||||||||||||||||||    
T  15796 catcatcttgatcatcttatatcgactcatgcaacttggttaaataacaatagcagcata 15737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 10639 - 10580
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    ||||||||| || |||||||   |||||||||||||| ||||||||||||||||| ||||    
T  10639 catcatcttgatcatcttatatcgactcatgcaacttggttaaataacaatagcaacata 10580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 18367 - 18459
Alignment:
Q  40 cttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattttcaacaacttcttg 134  Q
    |||||||| || |||||||||||||||||||||| | ||||||||| || |||||||||   | |||||| ||| ||||| ||||||| ||||||    
T  18367 cttattcatacacatgcaacttagttaaataacatttgcagcataaacaaatcacatca--ggtttaataacaaatcattctcaacaatttcttg 18459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 4320 - 4273
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||    
T  4320 gactcatgcaacttagttaaataacagcagcaacataatcagatcaca 4273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 46820 - 46773
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcataatcagatcaca 95  Q
    ||||||||||||||||||| |||||||||||||||||  |||||||||    
T  46820 gactcatgcaacttagttacataacaatagcagcataggcagatcaca 46773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 281007 - 280950
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagca 82  Q
    |||||||||||| ||||| |  |||||||||| || ||||||||||||||||||||||    
T  281007 catcatcttaatcatcttgtatagactcatgcgacatagttaaataacaatagcagca 280950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 1881 - 1957
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| |||||||   |||||||||||||| ||| ||||||||||||| ||||  ||||| ||| |||||    
T  1881 catcatcttaatcatcttatatcgactcatgcaacttggttgaataacaatagcaacataggcagattacaacaaca 1957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 6508 - 6472
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6508 gactcatgcaacatagttaaataacaatagcagcata 6472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 11586 - 11517
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  11586 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 11517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 26828 - 26904
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||| ||||| |||||||   |||||||||| ||| ||||||||||||||||||||||  ||||| ||| |||||    
T  26828 catcattttaatcatcttatatcgactcatgcatcttggttaaataacaatagcagcataggcagattacaacaaca 26904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 14172 - 14103
Alignment:
Q  49 actcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcattt 120  Q
    ||||||||||||||||| || |||||| ||||||||||||  ||| ||||  ||||||||| ||||||||||    
T  14172 actcatgcaacttagtttaacaacaattgcagcataatcaattcatatca--agcttaataacaattcattt 14103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 36331 - 36396
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacagcttaatatcaattcatt 119  Q
    ||||||||||| |||||||||| | |||||||||||| |||||||||  ||||||||| ||| |||||    
T  36331 catgcaacttaattaaataacatttgcagcataatcaaatcacatca--agcttaataacaaatcatt 36396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 9080 - 9004
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    ||||||||| || |||||||   |||||||||||||| ||||||||| ||||||||||||  ||||| ||| |||||    
T  9080 catcatcttgatcatcttatatcgactcatgcaacttggttaaataataatagcagcataggcagattacaacaaca 9004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 48550 - 48500
Alignment:
Q  52 catgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    |||||||||  ||||||||||||||||||||||  ||||||||| ||||||    
T  48550 catgcaactaggttaaataacaatagcagcatagacagatcacaacaacag 48500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 29091 - 29153
Alignment:
Q  22 catcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||| |||||| ||| | |  ||||||||||| ||||||||||||||||||| ||||||    
T  29091 catcatcaacttaatcatcatgtatagactcatgcatcttagttaaataacaatagtagcata 29153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 7911 - 7878
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagc 81  Q
    |||||||||||||| |||||||||||||||||||    
T  7911 gactcatgcaacttggttaaataacaatagcagc 7878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 1155 - 1102
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  1155 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 1102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 6611 - 6664
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  6611 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 6664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 13991 - 14044
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  13991 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 14044  T

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Target: scaffold0243 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 6244 - 6191
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  6244 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 6191  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 19980 - 20057
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacag 102  Q
    ||||||||| || ||||||| | |||||||||| |||  |||||||||||||| ||||||  ||||| ||| ||||||    
T  19980 catcatcttgatcatcttataccgactcatgcagcttgattaaataacaatagtagcataggcagattacaacaacag 20057  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 15898 - 15845
Alignment:
Q  21 acatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaa 74  Q
    |||||||||||||||| | ||||  | |||||||||| ||||||||||||||||    
T  15898 acatcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaa 15845  T

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Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 178921 - 178957
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  178921 gactcatgcagcttggttaaataacaatagcagcata 178957  T

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Target: scaffold0819 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 4214 - 4262
Alignment:
Q  24 tcatcatcttaattatcttattcagactcatgcaacttagttaaataac 72  Q
    ||||||||||||| | ||||  | |||||||||||||||||||||||||    
T  4214 tcatcatcttaatcaacttagaccgactcatgcaacttagttaaataac 4262  T

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Target: scaffold0185 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 33569 - 33625
Alignment:
Q  47 agactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaacagc 103  Q
    |||||||| || | |||||||||||||||| ||||| || ||||||||| |||||||    
T  33569 agactcatccatcatagttaaataacaataacagcacaagcagatcacaacaacagc 33625  T

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Target: scaffold0145 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 9744 - 9804
Alignment:
Q  19 ggacatcatcatcttaattatcttattcagactcatgcaacttagttaaataacaatagca 79  Q
    |||| ||||||||||||| | ||||  | |||||||||| |||||||||||||||| ||||    
T  9744 ggacttcatcatcttaatcaacttagaccgactcatgcagcttagttaaataacaacagca 9804  T

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Target: scaffold0114 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 7295 - 7371
Alignment:
Q  25 catcatcttaattatcttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcacatcaaca 101  Q
    |||||||||||| ||||||    |||||||||||||| ||| ||||||||||||| ||||  ||||| ||| |||||    
T  7295 catcatcttaatcatcttaaatcgactcatgcaacttggttgaataacaatagcaacataggcagattacaacaaca 7371  T

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Target: scaffold0106 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 15332 - 15296
Alignment:
Q  48 gactcatgcaacttagttaaataacaatagcagcata 84  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  15332 gactcatgcagcttagttaaataacaatagcaacata 15296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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