View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0495_high_12 (Length: 222)

Name: NF0495_high_12
Description: NF0495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0495_high_12
NF0495_high_12
[»] chr8 (14 HSPs)
chr8 (22-180)||(29763549-29763707)
chr8 (22-180)||(21579887-21580046)
chr8 (22-163)||(42560208-42560350)
chr8 (62-172)||(32807285-32807396)
chr8 (52-180)||(41680833-41680962)
chr8 (22-163)||(18760564-18760706)
chr8 (53-141)||(27472391-27472478)
chr8 (53-141)||(38550086-38550173)
chr8 (52-141)||(1327119-1327207)
chr8 (43-177)||(39833887-39834023)
chr8 (22-121)||(3273212-3273310)
chr8 (81-154)||(20982747-20982820)
chr8 (92-141)||(39936813-39936862)
chr8 (92-140)||(19139966-19140014)
[»] chr5 (18 HSPs)
chr5 (22-180)||(12122202-12122361)
chr5 (22-180)||(21557726-21557885)
chr5 (22-180)||(21555060-21555219)
chr5 (35-175)||(24212385-24212526)
chr5 (22-180)||(30615768-30615926)
chr5 (24-180)||(31455702-31455862)
chr5 (35-172)||(35852643-35852781)
chr5 (22-163)||(36460199-36460341)
chr5 (24-180)||(31455089-31455249)
chr5 (22-180)||(5889092-5889252)
chr5 (81-174)||(17875232-17875326)
chr5 (52-141)||(5889269-5889357)
chr5 (52-141)||(29915167-29915255)
chr5 (52-141)||(21871656-21871743)
chr5 (52-141)||(21875936-21876023)
chr5 (115-143)||(21871593-21871621)
chr5 (115-143)||(21875873-21875901)
chr5 (115-143)||(22120217-22120245)
[»] chr4 (21 HSPs)
chr4 (22-180)||(33186114-33186273)
chr4 (35-172)||(15880717-15880855)
chr4 (22-180)||(13844584-13844744)
chr4 (22-163)||(35812171-35812312)
chr4 (52-141)||(52873251-52873339)
chr4 (53-141)||(362185-362272)
chr4 (62-163)||(9923326-9923427)
chr4 (62-163)||(11479432-11479533)
chr4 (52-141)||(46642773-46642861)
chr4 (22-175)||(46642884-46643038)
chr4 (52-141)||(13844478-13844566)
chr4 (22-101)||(14185252-14185331)
chr4 (52-141)||(15868794-15868881)
chr4 (55-160)||(630862-630966)
chr4 (92-141)||(19609524-19609573)
chr4 (103-170)||(15190360-15190428)
chr4 (68-152)||(21189751-21189834)
chr4 (103-180)||(15099383-15099461)
chr4 (115-143)||(630796-630824)
chr4 (115-143)||(13812831-13812859)
chr4 (115-143)||(15868731-15868759)
[»] scaffold0737 (1 HSPs)
scaffold0737 (22-172)||(6359-6510)
[»] chr3 (21 HSPs)
chr3 (22-180)||(31224635-31224794)
chr3 (22-180)||(15447681-15447837)
chr3 (54-180)||(31415416-31415543)
chr3 (22-148)||(11912966-11913092)
chr3 (39-172)||(6808157-6808291)
chr3 (52-163)||(49969963-49970075)
chr3 (22-141)||(1988912-1989032)
chr3 (52-141)||(18439941-18440029)
chr3 (52-141)||(20630191-20630279)
chr3 (62-141)||(49389772-49389852)
chr3 (83-163)||(40812015-40812096)
chr3 (22-175)||(12269620-12269773)
chr3 (52-141)||(12269509-12269597)
chr3 (62-163)||(5841958-5842061)
chr3 (79-141)||(30175304-30175366)
chr3 (92-163)||(40807173-40807245)
chr3 (103-180)||(1465419-1465497)
chr3 (103-180)||(18439845-18439923)
chr3 (92-163)||(22307386-22307458)
chr3 (115-143)||(12852390-12852418)
chr3 (92-163)||(17538284-17538356)
[»] chr7 (23 HSPs)
chr7 (22-180)||(30820937-30821096)
chr7 (25-180)||(36685934-36686090)
chr7 (22-172)||(11085019-11085170)
chr7 (22-172)||(11092757-11092908)
chr7 (23-163)||(15213728-15213869)
chr7 (54-180)||(38480249-38480376)
chr7 (35-172)||(9320423-9320561)
chr7 (22-150)||(15439328-15439457)
chr7 (52-141)||(8468366-8468454)
chr7 (52-141)||(14270138-14270226)
chr7 (22-141)||(37727607-37727727)
chr7 (53-141)||(45847735-45847822)
chr7 (52-141)||(17232560-17232648)
chr7 (34-163)||(11391870-11392001)
chr7 (92-163)||(12371455-12371527)
chr7 (92-163)||(13148275-13148347)
chr7 (83-141)||(8851959-8852017)
chr7 (103-180)||(9389705-9389783)
chr7 (103-180)||(17232666-17232744)
chr7 (95-141)||(32434396-32434442)
chr7 (92-129)||(11066680-11066717)
chr7 (52-141)||(18302107-18302194)
chr7 (115-143)||(39267712-39267740)
[»] scaffold1351 (1 HSPs)
scaffold1351 (23-180)||(1578-1736)
[»] chr2 (12 HSPs)
chr2 (23-180)||(24865452-24865610)
chr2 (34-180)||(22501001-22501148)
chr2 (34-180)||(22508935-22509082)
chr2 (23-180)||(7672240-7672392)
chr2 (22-138)||(2524410-2524526)
chr2 (24-163)||(6576403-6576543)
chr2 (81-148)||(22501128-22501195)
chr2 (81-148)||(22509062-22509129)
chr2 (81-163)||(24883630-24883713)
chr2 (62-126)||(24436258-24436321)
chr2 (92-163)||(24781643-24781715)
chr2 (92-163)||(5032127-5032199)
[»] scaffold0071 (1 HSPs)
scaffold0071 (22-180)||(14352-14511)
[»] chr6 (15 HSPs)
chr6 (22-172)||(20734128-20734279)
chr6 (35-172)||(2201139-2201277)
chr6 (37-172)||(22420987-22421123)
chr6 (25-163)||(34296953-34297092)
chr6 (22-180)||(27851213-27851373)
chr6 (56-163)||(19399787-19399895)
chr6 (22-180)||(25956537-25956697)
chr6 (52-141)||(25956715-25956803)
chr6 (62-163)||(18927853-18927954)
chr6 (52-160)||(27851087-27851195)
chr6 (53-141)||(31630622-31630709)
chr6 (92-163)||(27322221-27322293)
chr6 (62-163)||(28708651-28708754)
chr6 (92-141)||(18708700-18708749)
chr6 (92-141)||(23151069-23151118)
[»] chr1 (13 HSPs)
chr1 (24-152)||(12328538-12328666)
chr1 (43-172)||(51274290-51274420)
chr1 (35-143)||(8885447-8885555)
chr1 (62-143)||(51326893-51326974)
chr1 (22-180)||(28194365-28194525)
chr1 (22-180)||(43697418-43697578)
chr1 (52-141)||(28194543-28194631)
chr1 (52-121)||(43543069-43543137)
chr1 (52-141)||(43697312-43697400)
chr1 (53-141)||(46382652-46382737)
chr1 (103-180)||(20636883-20636961)
chr1 (83-163)||(48301040-48301121)
chr1 (103-174)||(49261380-49261452)
[»] scaffold0599 (2 HSPs)
scaffold0599 (22-148)||(4660-4786)
scaffold0599 (22-148)||(242-368)
[»] scaffold0395 (1 HSPs)
scaffold0395 (35-180)||(10907-11053)
[»] scaffold0815 (1 HSPs)
scaffold0815 (66-180)||(496-611)
[»] scaffold0116 (4 HSPs)
scaffold0116 (22-180)||(43700-43860)
scaffold0116 (22-180)||(47620-47780)
scaffold0116 (52-141)||(43878-43966)
scaffold0116 (52-92)||(47798-47837)
[»] scaffold0434 (1 HSPs)
scaffold0434 (52-141)||(6770-6859)
[»] scaffold0061 (2 HSPs)
scaffold0061 (33-169)||(15419-15556)
scaffold0061 (33-169)||(24477-24614)
[»] scaffold0080 (1 HSPs)
scaffold0080 (30-172)||(59295-59437)
[»] scaffold0100 (1 HSPs)
scaffold0100 (52-141)||(36142-36230)
[»] scaffold0009 (2 HSPs)
scaffold0009 (52-141)||(85187-85275)
scaffold0009 (103-173)||(85300-85371)
[»] scaffold0371 (1 HSPs)
scaffold0371 (22-163)||(3093-3234)
[»] scaffold0810 (2 HSPs)
scaffold0810 (61-141)||(2984-3063)
scaffold0810 (22-91)||(3066-3136)
[»] scaffold0335 (1 HSPs)
scaffold0335 (62-163)||(834-935)
[»] scaffold0513 (1 HSPs)
scaffold0513 (52-141)||(10963-11051)
[»] scaffold0004 (1 HSPs)
scaffold0004 (52-121)||(362964-363032)
[»] scaffold0001 (1 HSPs)
scaffold0001 (62-141)||(76942-77019)
[»] scaffold0802 (1 HSPs)
scaffold0802 (62-141)||(5478-5556)
[»] scaffold0075 (1 HSPs)
scaffold0075 (52-141)||(8379-8466)
[»] scaffold0134 (1 HSPs)
scaffold0134 (92-163)||(10029-10101)
[»] scaffold0679 (1 HSPs)
scaffold0679 (62-163)||(2449-2552)
[»] scaffold0375 (1 HSPs)
scaffold0375 (93-163)||(9106-9177)
[»] scaffold0384 (1 HSPs)
scaffold0384 (92-163)||(8189-8261)
[»] scaffold1137 (1 HSPs)
scaffold1137 (103-180)||(2300-2378)
[»] scaffold0124 (2 HSPs)
scaffold0124 (52-141)||(24739-24826)
scaffold0124 (115-143)||(24676-24704)
[»] scaffold0192 (1 HSPs)
scaffold0192 (115-143)||(9927-9955)
[»] scaffold0142 (1 HSPs)
scaffold0142 (115-143)||(7670-7698)


Alignment Details
Target: chr8 (Bit Score: 159; Significance: 8e-85; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 29763549 - 29763707
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29763549 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 29763648  T
Q  122 tgttatatatgatgattattatcgatggtgattgctgcatatgtttaaatgatgatgtc 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29763649 tgttatatatgatgattattatcgatggtgattgctgcatatgtttaaatgatgatgtc 29763707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 21579887 - 21580046
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21579887 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 21579986  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||    
T  21579987 tgttatatatgataattattattgatggtgacttgctgcatatgtttaaatgatgttgtc 21580046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 42560208 - 42560350
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  42560208 cagagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaaattgtaat 42560307  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||||||||||||||||||| |||| ||| |||||||||||    
T  42560308 tgttatatatgatgattattattgatgttgacttgctgcatat 42560350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 32807396 - 32807285
Alignment:
Q  62 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgca 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  32807396 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgca 32807297  T
Q  161 tatgtttaaatg 172  Q
    ||||| ||||||    
T  32807296 tatgtctaaatg 32807285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 180
Target Start/End: Original strand, 41680833 - 41680962
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtg 151  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||||||||| |||||||    
T  41680833 atgatttatattgatgattaaatgtgaaaatatttatatattgtgaaagatattgatatcaaattgtaattgttatatatgatgattattattgatggtg 41680932  T
Q  152 a-ttgctgcatatgtttaaatgatgatgtc 180  Q
    | |||||||||||||||||||| |||||||    
T  41680933 acttgctgcatatgtttaaatggtgatgtc 41680962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 18760706 - 18760564
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||| |||||||||||||||||||||   | ||||  | |||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  18760706 cagagagtatgaataagatgattaatattgtgggtttaagtagatgattaaatgtgaaaagatttatatattgtgaaagatgttgatatgaagttataat 18760607  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
     ||||||| ||||||||||| | |||| ||| |||||||||||    
T  18760606 ggttatatttgatgattattgttgatgttgacttgctgcatat 18760564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 27472391 - 27472478
Alignment:
Q  53 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||  ||||||||||    
T  27472391 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattatt 27472478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 38550086 - 38550173
Alignment:
Q  53 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||  ||||||||||    
T  38550086 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattatt 38550173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 1327119 - 1327207
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||| ||| |||  ||||||||||    
T  1327119 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaacgatgttgatatgaagttgtaatggttgtattagatgattatt 1327207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 43 - 177
Target Start/End: Complemental strand, 39834023 - 39833887
Alignment:
Q  43 ttaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttg-taattgttatatatgatgattatt 141  Q
    ||||||||  |||||||| |||||||||||||||||||| || ||||||  ||||| |  |||||||||||||||  ||| ||||||||||| |||||||    
T  39834023 ttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataacgtgaatgttgttgatatgaagttgcaaatggttatatatgaagattatt 39833924  T
Q  142 atcgatggtga-ttgctgcatatgtttaaatgatgat 177  Q
    || |||||| | | |||| ||||||||||||||||||    
T  39833923 attgatggttactcgctgtatatgtttaaatgatgat 39833887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 3273310 - 3273212
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||| |||||||||||||||||| |||  ||||||  |||||||||||||||| ||| ||||||||||||||||| | |||| ||||||||||||||    
T  3273310 cagagagtatgaataagatgattaatgttatggatttaagttgatgattaaatgtg-aaagatttatatattgtgaaaaatgttggtatgaagttgtaat 3273212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 20982747 - 20982820
Alignment:
Q  81 atatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtgatt 154  Q
    |||| ||||||||||||||||  |||||||||||||||||| ||| |||  |||||||||| | |||| |||||    
T  20982747 atatatatatattgtgaaagatattgatatgaagttgtaatggttgtattagatgattattgttgatgttgatt 20982820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 39936813 - 39936862
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||||||||    
T  39936813 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattatt 39936862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 19140014 - 19139966
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattat 140  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||    
T  19140014 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattat 19139966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 7e-76; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 12122202 - 12122361
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12122202 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 12122301  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  12122302 tgttatatatgatgattattattgatggtgacttgcggcatatgtttaaatgatgatgtc 12122361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 21557726 - 21557885
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21557726 cagagaggatgaataagatgattaatattgatgttttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 21557825  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| ||||    
T  21557826 tgttatatatgatgattattattgatagtgacttgctgcatatgtttaaatgatgttgtc 21557885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 21555060 - 21555219
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  21555060 cagagaggatgaataagatgattaatattgatgttttagtttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgacataaagttgtaat 21555159  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  21555160 tgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtc 21555219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 35 - 175
Target Start/End: Complemental strand, 24212526 - 24212385
Alignment:
Q  35 taagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgat 134  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24212526 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgat 24212427  T
Q  135 gattattatcgatggtga-ttgctgcatatgtttaaatgatg 175  Q
    ||||| ||| |||||||| ||||||||||||| |||||||||    
T  24212426 gattaatattgatggtgacttgctgcatatgtctaaatgatg 24212385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 30615926 - 30615768
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30615926 cagagaggatgaataagatgattaatattgataatttacttttatgattaaatgtgaaaatatt-atatattgtgaaagacgttgatatgaagttgtaat 30615828  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||||  ||||||||||||  |||||||| |||||||||||||||||| |||||||||    
T  30615827 tgttataattgatgattattaatgatggtgacttgctgcatatgtttaaacgatgatgtc 30615768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 31455862 - 31455702
Alignment:
Q  24 gagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattg 123  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  31455862 gagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatatgaagttgtaatcg 31455763  T
Q  124 ttatatatga---tgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||| ||||   |||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  31455762 ttataaatgatattgattattattgatggtgacttgctgcatatgtttaaatgatgttgtc 31455702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 35852781 - 35852643
Alignment:
Q  35 taagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgat 134  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  35852781 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatacgat 35852682  T
Q  135 gattattatcgatggt-gattgctgcatatgtttaaatg 172  Q
    ||||||||| |||||| | ||||||||||||| ||||||    
T  35852681 gattattattgatggtggcttgctgcatatgtctaaatg 35852643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 36460341 - 36460199
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36460341 cagagaggatgaacaagatgattaataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 36460242  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    ||||||||||||||||||||||  ||| ||| |||||||||||    
T  36460241 tgttatatatgatgattattattaatgttgacttgctgcatat 36460199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 31455249 - 31455089
Alignment:
Q  24 gagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattg 123  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |    
T  31455249 gagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaaatatttatatattgtgaaaaacgttgatattaagttgtaatcg 31455150  T
Q  124 ttatatatga---tgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||| ||||   |||||||||| |||||||| ||| ||||||||||||||||||| ||||    
T  31455149 ttataaatgatattgattattattgatggtgacttgatgcatatgtttaaatgatgttgtc 31455089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 5889092 - 5889252
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 120  Q
    |||||||||||| || ||||||| ||||||  |||||||| |||||||||||||||||||| || |||||| ||||||||  ||||||||| ||||| ||    
T  5889092 cagagaggatgattatgatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaa 5889191  T
Q  121 ttgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||||| |||| ||||||||| |||||| | |||||| |||||||||||||||| ||||    
T  5889192 ttgttatacatgaagattattattgatggttacttgctgtatatgtttaaatgatgttgtc 5889252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 81 - 174
Target Start/End: Complemental strand, 17875326 - 17875232
Alignment:
Q  81 atatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgat 174  Q
    ||||||||||| ||  |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  17875326 atatttatataatgataaagacgttgatatgaagttctaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgat 17875232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 5889269 - 5889357
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||| ||| ||| |||||||||||    
T  5889269 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattatt 5889357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 29915167 - 29915255
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||  ||||||||||    
T  29915167 atgatctactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattatt 29915255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 21871656 - 21871743
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||| |||||| || || |||||| |||||||||||| || | |||||||||||||||||  || ||| |||||||||||    
T  21871656 atgatttactttgacgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattatt 21871743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 21875936 - 21876023
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||| |||||| || || |||||| |||||||||||| || | |||||||||||||||||  || ||| |||||||||||    
T  21875936 atgatttactttgacgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattatt 21876023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 21871593 - 21871621
Alignment:
Q  115 ttgtaattgttatatatgatgattattat 143  Q
    |||||||||||||||||||||||||||||    
T  21871593 ttgtaattgttatatatgatgattattat 21871621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 21875873 - 21875901
Alignment:
Q  115 ttgtaattgttatatatgatgattattat 143  Q
    |||||||||||||||||||||||||||||    
T  21875873 ttgtaattgttatatatgatgattattat 21875901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 22120217 - 22120245
Alignment:
Q  115 ttgtaattgttatatatgatgattattat 143  Q
    |||||||||||||||||||||||||||||    
T  22120217 ttgtaattgttatatatgatgattattat 22120245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 33186273 - 33186114
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33186273 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattatgaaagacgttgatatgaagttgtaat 33186174  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  33186173 tgttatatatgatgattattattgatggtgacttgctgcatttgtttaaatgatgatgtc 33186114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 15880855 - 15880717
Alignment:
Q  35 taagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgat 134  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15880855 taagatgatcaatattgatgatttactttgattattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 15880756  T
Q  135 gattattatcgatggtga-ttgctgcatatgtttaaatg 172  Q
    ||||||||| |||||||| ||||| ||||||| ||||||    
T  15880755 gattattattgatggtgacttgctacatatgtctaaatg 15880717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 13844744 - 13844584
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 120  Q
    |||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||||| |||||| ||||||||  ||||||||| ||||| ||    
T  13844744 cagagaggatgattaagatgatttaatattattgatttacgttgatgattaaatgtgaaaatatctatataatgtgaaagttgttgatatggagttgcaa 13844645  T
Q  121 ttgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
     |||||||||||| ||||||||| |||||| | ||| || |||||||||||||||| ||||    
T  13844644 atgttatatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttgtc 13844584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 35812171 - 35812312
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||| || ||||||||||||||| ||   ||||||  |||||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||||    
T  35812171 cagagagtataaataagatgattaatgttgtggatttaagttgatgattaaatgtggaag-atttatatattgtgaaagatgttgatatgaagttgtaat 35812269  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
     |||||||  |||||||||| | |||| ||| |||||||||||    
T  35812270 ggttatattggatgattattgttgatgttgacttgctgcatat 35812312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 52873251 - 52873339
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||  ||||||||||    
T  52873251 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattatt 52873339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 362272 - 362185
Alignment:
Q  53 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| ||| |||  ||||||||||    
T  362272 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagacgttgatatgaagttataatggttgtattagatgattatt 362185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 9923427 - 9923326
Alignment:
Q  62 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgca 160  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| ||||||||    
T  9923427 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 9923329  T
Q  161 tat 163  Q
    |||    
T  9923328 tat 9923326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 11479432 - 11479533
Alignment:
Q  62 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgca 160  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| ||||||||    
T  11479432 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 11479530  T
Q  161 tat 163  Q
    |||    
T  11479531 tat 11479533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 46642861 - 46642773
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||| |||||||||||| ||||| || ||||||| | ||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  46642861 atgatttaatttgatgattaa-tgtgagaagatttataaactgtgaaagacgttgatatgaagttgtaatggttatatttgatgattatt 46642773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 46643038 - 46642884
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 120  Q
    |||||||||||| |||||||||| ||||||  || || |  ||||||||||| || ||||| ||||||||||||||||||  ||| ||||||||||||||    
T  46643038 cagagaggatgactaagatgatttaatattgttgtttaaagttgatgattaa-tgcgaaaagatttatatattgtgaaagttgttaatatgaagttgtaa 46642940  T
Q  121 ttgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatg 175  Q
    |||||| |||||| || |||||| | |||| | ||| || ||||||||||||||||    
T  46642939 ttgttacatatgaagaatattattggtggttacttgttgtatatgtttaaatgatg 46642884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 13844566 - 13844478
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||| | ||||||||||||||||| ||| ||| |||| ||||||    
T  13844566 atgatttactttgattattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgattattatt 13844478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 14185331 - 14185252
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaaga 101  Q
    ||||||| |||||||||||||||||  ||  || ||||  |||||| |||||||||||||||||||||||||||||||||    
T  14185331 cagagagtatgaataagatgattaacgttgttgttttaagttgatggttaaatgtgaaaatatttatatattgtgaaaga 14185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 15868794 - 15868881
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| || || |||||| |||||||||||| || | |||||||||||||||||  |||||| |||||||||||    
T  15868794 atgatttactttgatgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattatatctgatgattatt 15868881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 630862 - 630966
Alignment:
Q  55 atttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-t 153  Q
    |||||||||||||||||| || || |||||| |||||||||||| || | |||||||||||||||||  || ||| ||||||||||||| |||| ||| |    
T  630862 atttactttgatgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattattgatgttgact 630959  T
Q  154 tgctgca 160  Q
    |||||||    
T  630960 tgctgca 630966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 19609573 - 19609524
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||||||||    
T  19609573 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattatt 19609524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 15190428 - 15190360
Alignment:
Q  103 gttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaa 170  Q
    ||||||||||||||| |||||||||| |||| ||||||||  |||||| | |||||| |||||||||||    
T  15190428 gttgatatgaagttgaaattgttatacatgaagattattaatgatggttacttgctgtatatgtttaaa 15190360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 21189751 - 21189834
Alignment:
Q  68 attaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga 152  Q
    |||||| ||| |||||||||||| || ||||||| ||||||||  |||| || ||||| ||||||||||||||||| | ||||||    
T  21189751 attaaaagtggaaatatttatatgttatgaaagatgttgatat-cagttatacttgttgtatatgatgattattattgttggtga 21189834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 15099461 - 15099383
Alignment:
Q  103 gttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||||||||| |||||||||| || | ||||||||  |||||| | |||||| ||||||||||| |||| ||||    
T  15099461 gttgatatgaagttgaaattgttatacataaagattattaatgatggttacttgctgtatatgtttaaaagatgttgtc 15099383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 630796 - 630824
Alignment:
Q  115 ttgtaattgttatatatgatgattattat 143  Q
    |||||||||||||||||||||||||||||    
T  630796 ttgtaattgttatatatgatgattattat 630824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 13812831 - 13812859
Alignment:
Q  115 ttgtaattgttatatatgatgattattat 143  Q
    |||||||||||||||||||||||||||||    
T  13812831 ttgtaattgttatatatgatgattattat 13812859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 15868731 - 15868759
Alignment:
Q  115 ttgtaattgttatatatgatgattattat 143  Q
    |||||||||||||||||||||||||||||    
T  15868731 ttgtaattgttatatatgatgattattat 15868759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 172
Target Start/End: Original strand, 6359 - 6510
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6359 cagagaggatgaataagatgattaataataatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 6458  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatg 172  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  6459 tgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatg 6510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 31224635 - 31224794
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31224635 cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaat 31224734  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  31224735 tgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtc 31224794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 15447681 - 15447837
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  15447681 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaat 15447780  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||   ||||||||||| |||||||| ||| ||||||||||||||||||| ||||    
T  15447781 tgttatat---atgattattattgatggtgacttgatgcatatgtttaaatgatgttgtc 15447837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 31415543 - 31415416
Alignment:
Q  54 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga- 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  31415543 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgac 31415444  T
Q  153 ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||||||||||||||||| ||||    
T  31415443 ttgctgcatatgtttaaatgatgttgtc 31415416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 11913092 - 11912966
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11913092 cagagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 11912993  T
Q  122 tgttatatatgatgattattatcgatg 148  Q
    ||||||||||||| |||||||| ||||    
T  11912992 tgttatatatgattattattattgatg 11912966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 6808291 - 6808157
Alignment:
Q  39 atgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgatt 138  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  6808291 atgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatataatgatt 6808192  T
Q  139 attatcgatggtga-ttgctgcatatgtttaaatg 172  Q
    ||||| |||||||| || || ||||||| ||||||    
T  6808191 attattgatggtgacttccttcatatgtctaaatg 6808157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 49969963 - 49970075
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtg 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||| | |||| ||    
T  49969963 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttg 49970062  T
Q  152 a-ttgctgcatat 163  Q
    | |||||||||||    
T  49970063 acttgctgcatat 49970075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 1988912 - 1989032
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 120  Q
    |||||||||||| |||||||||| ||||||  ||||| || |||||||||||||||||||| || |||||| ||||||||  ||||||||||||||||||    
T  1988912 cagagaggatgattaagatgatttaatattgttgattcacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgaagttgtaa 1989011  T
Q  121 ttgttatatatgatgattatt 141  Q
    | ||| ||| |||||||||||    
T  1989012 tggttgtatttgatgattatt 1989032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 18439941 - 18440029
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||||||||| | ||||||||||||||||| ||| ||| |||||||||||    
T  18439941 atgatttactttgatgattaa-tgtgagaatatctatatattgtgaaagatgatgatatgaagttgtaatggttgtatttgatgattatt 18440029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 20630191 - 20630279
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||  ||||||||||    
T  20630191 atgatttactttgacgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattatt 20630279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 49389772 - 49389852
Alignment:
Q  62 ttgatgattaaatgtgaaaatattta--tatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||||||||  ||||||||||| |  ||||||||||||||||||||||||||| |||||||||||    
T  49389772 ttgatgattaaatgtgaaaatatttagatatattgtgaa-gttgttgatatgaagttgtaattgttatatttgatgattatt 49389852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 40812096 - 40812015
Alignment:
Q  83 atttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| |||||||||||    
T  40812096 atttatatattgtgaaagatgttgatatgaagttgtaatggttatatgggatgattattgttgatgttgacttgctgcatat 40812015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 12269773 - 12269620
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 120  Q
    |||||||||||| |||||||||| ||||||  || || |  ||||||||||| ||  |||| ||||||||||||||||||  |||||||||||||||||     
T  12269773 cagagaggatgactaagatgatttaatattgttgtttaaagttgatgattaa-tga-aaaagatttatatattgtgaaagttgttgatatgaagttgtat 12269676  T
Q  121 ttgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatg 175  Q
    || ||| |||||| || |||||||| |||| | ||| || ||||||||||||||||    
T  12269675 tttttacatatgaagaatattatcggtggttacttgttgtatatgtttaaatgatg 12269620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 12269597 - 12269509
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||  ||||||||||| ||||| || ||||||| ||| |||| ||||||||||||||||||||||  |||||| |||||||||||    
T  12269597 atgatttaagttgatgattaa-tgtgagaagatttataaattttgaaggacgttgatatgaagttgtaatgattatatttgatgattatt 12269509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 5842061 - 5841958
Alignment:
Q  62 ttgatgattaaatgtga-aaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgc 159  Q
    |||||||||||||||   ||| ||||||||||||||||||| | | ||| ||||||||||| ||||||| ||||||||||| | |||| ||| |||||||    
T  5842061 ttgatgattaaatgtacgaaagatttatatattgtgaaagatgctcataagaagttgtaatggttatatttgatgattattgttgatgttgacttgctgc 5841962  T
Q  160 atat 163  Q
    ||||    
T  5841961 atat 5841958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 30175304 - 30175366
Alignment:
Q  79 aaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| | |||||  ||||||||||    
T  30175304 aaatatttatatactgtgaaagatgttgatatgaagttgtaatggatatatgggatgattatt 30175366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 40807245 - 40807173
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| |||||||||||    
T  40807245 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 40807173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 1465419 - 1465497
Alignment:
Q  103 gttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||||||||| |||||||||| |||| ||||||||  |||||| | |||||  |||||||||||||||| ||||    
T  1465419 gttgatatgaagttgaaattgttatacatgaagattattaatgatggttacttgctctatatgtttaaatgatgttgtc 1465497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 18439845 - 18439923
Alignment:
Q  103 gttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||| ||||| || |||||||||||| ||||||||| |||||| | ||| || |||||||||||||||| ||||    
T  18439845 gttgatatgtagttgcaaatgttatatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttgtc 18439923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 22307386 - 22307458
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||||||| |||||||||||||||||||  ||||||  |||||||||| | |||| ||| |||||||||||    
T  22307386 ttgtgaaagatgttgatatgaagttgtaatgattatattggatgattattgttgatgttgacttgctgcatat 22307458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 12852390 - 12852418
Alignment:
Q  115 ttgtaattgttatatatgatgattattat 143  Q
    |||||||||||||||||||||||||||||    
T  12852390 ttgtaattgttatatatgatgattattat 12852418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 17538356 - 17538284
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||||||| ||||||||||||||||| |  ||||||  |||||||||| | |||| ||| |||||||||||    
T  17538356 ttgtgaaagatgttgatatgaagttgtattgattatattggatgattattgttgatgttgacttgctgcatat 17538284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 2e-66; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 30820937 - 30821096
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30820937 cagagaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaaatatttatatattgtgaaatacgttgatatgaagttgtaat 30821036  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||||||||| ||||    
T  30821037 tgttatatatgatgattattattgatggtaacttgctgcatatgtttaaatgatgttgtc 30821096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 36685934 - 36686090
Alignment:
Q  25 agaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgt 124  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  36685934 agaggatgaataagatgattaatattgatgttttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgctgatatgaagttttaattgt 36686033  T
Q  125 tatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  36686034 tatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtc 36686090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 11085170 - 11085019
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  11085170 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaactatttatatattgtgaaagacgttgatatgaaattgtaat 11085071  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatg 172  Q
    |||||||||||||||||||||| |||||||| |||||||||| | |||||||    
T  11085070 tgttatatatgatgattattattgatggtgacttgctgcatacgattaaatg 11085019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 11092908 - 11092757
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11092908 cagagagtgtgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaaattgtaat 11092809  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatg 172  Q
    |||||||||||||||||||||| |||||||| ||| |||||| |||||||||    
T  11092808 tgttatatatgatgattattattgatggtgacttgttgcatacgtttaaatg 11092757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 15213869 - 15213728
Alignment:
Q  23 agagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaatt 122  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  15213869 agagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacattgatatgaaattgtaatt 15213770  T
Q  123 gttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    ||||||||||||||||||||| |||| ||| |||||||||||    
T  15213769 gttatatatgatgattattattgatgttgacttgctgcatat 15213728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 38480376 - 38480249
Alignment:
Q  54 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga- 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  38480376 gatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgac 38480277  T
Q  153 ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||||| ||||||||||| ||||    
T  38480276 ttgctgcatatatttaaatgatgttgtc 38480249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 35 - 172
Target Start/End: Original strand, 9320423 - 9320561
Alignment:
Q  35 taagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgat 134  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9320423 taagatgattaatattgatgatttattttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 9320522  T
Q  135 gattattatcgatggtga-ttgctgcatatgtttaaatg 172  Q
    ||||||||| |||||||| ||| ||||||||| ||||||    
T  9320523 gattattattgatggtgacttgttgcatatgtctaaatg 9320561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 15439457 - 15439328
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 120  Q
    |||||||||||| |||||||||| ||||||  |||||||| |||||||||||||||||||| || ||||   ||||||||  ||||||||||||||||||    
T  15439457 cagagaggatgactaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatactatgtgaaagttgttgatatgaagttgtaa 15439358  T
Q  121 ttgttatatatgatgattattatcgatggt 150  Q
    ||||||||||||| ||||||||| ||||||    
T  15439357 ttgttatatatgaagattattattgatggt 15439328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 8468454 - 8468366
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||  ||||||||||    
T  8468454 atgatttactttgatgattaa-tgtgataatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattatt 8468366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 14270138 - 14270226
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||  ||||||||||    
T  14270138 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattatt 14270226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 37727607 - 37727727
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 120  Q
    |||||||||||| |||||||||| ||||||  || ||||| |||||||||||||||||||| || |||||| ||||||||  || |||||||||||||||    
T  37727607 cagagaggatgattaagatgatttaatattgttgctttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgtagatatgaagttgtaa 37727706  T
Q  121 ttgttatatatgatgattatt 141  Q
    | ||| ||| |||||||||||    
T  37727707 tggttgtatttgatgattatt 37727727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 45847735 - 45847822
Alignment:
Q  53 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||  ||||||||||    
T  45847735 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtattagatgattatt 45847822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 17232648 - 17232560
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||| ||| ||| |||  ||||||||||    
T  17232648 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttggaatggttgtattagatgattatt 17232560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 11391870 - 11392001
Alignment:
Q  34 ataagatgattaatattaatgatttactttgatgattaaatgtga-aaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatg 132  Q
    |||||||||||||| ||   ||||||  |||||||||||||||   ||| ||||||||||||||||||| | | ||| ||||||||||| |||||||  |    
T  11391870 ataagatgattaatgttgtggatttaaattgatgattaaatgtacgaaagatttatatattgtgaaagatgctcataagaagttgtaatggttatattgg 11391969  T
Q  133 atgattattatcgatggtga-ttgctgcatat 163  Q
    ||||||||| | |||| ||| |||||||||||    
T  11391970 atgattattgttgatgttgacttgctgcatat 11392001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 12371527 - 12371455
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| |||||||||||    
T  12371527 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 12371455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 13148275 - 13148347
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| |||||||||||    
T  13148275 ttgtgaaagatgttgatatgaagttgtaatggttatattagatgattattgttgatgttgacttgctgcatat 13148347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 8851959 - 8852017
Alignment:
Q  83 atttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||||||||  ||||||| |||||||||| |||||||  ||||||||||    
T  8851959 atttatatattgtgaaagattttgatataaagttgtaatggttatatgggatgattatt 8852017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 9389705 - 9389783
Alignment:
Q  103 gttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||||||||| ||||| |||| |||| ||||||||  |||||| | |||||| |||||||||||||||| ||||    
T  9389705 gttgatatgaagttgaaattgatatacatgaagattattaatgatggttacttgctgtatatgtttaaatgatgttgtc 9389783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 17232744 - 17232666
Alignment:
Q  103 gttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||| ||||| || ||||| |||||| ||||||||  |||||| | ||| || |||||||||||||||||||||    
T  17232744 gttgatatggagttgcaaatgttacatatgaagattattaatgatggttacttgttgtatatgtttaaatgatgatgtc 17232666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 32434396 - 32434442
Alignment:
Q  95 tgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||| ||||||||||||||||||| |||||||  ||||||||||    
T  32434396 tgaaagatgttgatatgaagttgtaatggttatattggatgattatt 32434442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 11066717 - 11066680
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatat 129  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  11066717 ttgtgaaagatgttgatatgaagttgtaatagttatat 11066680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 18302194 - 18302107
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||  || || |||||| |||||||||| | || | |||||||||||||||||  || ||| |||||||||||    
T  18302194 atgatttactttgatgattat-tgagagaatatt-atatattgtggatgaagatgatatgaagttgtaatgattgtatttgatgattatt 18302107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 39267712 - 39267740
Alignment:
Q  115 ttgtaattgttatatatgatgattattat 143  Q
    |||||||||||||||||||||||||||||    
T  39267712 ttgtaattgttatatatgatgattattat 39267740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 23 - 180
Target Start/End: Complemental strand, 1736 - 1578
Alignment:
Q  23 agagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaatt 122  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1736 agagaggattaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaatt 1637  T
Q  123 gttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||||| |||||||||||| |||||||| ||| ||||||||||||||||||| ||||    
T  1636 gttatataagatgattattattgatggtgacttgatgcatatgtttaaatgatgttgtc 1578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 23 - 180
Target Start/End: Original strand, 24865452 - 24865610
Alignment:
Q  23 agagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaatt 122  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24865452 agagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatt 24865551  T
Q  123 gttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||||| |||||||||||| |||||||| ||| ||||||||||||||||||| ||||    
T  24865552 gttatataagatgattattattgatggtgacttgatgcatatgtttaaatgatgttgtc 24865610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 34 - 180
Target Start/End: Complemental strand, 22501148 - 22501001
Alignment:
Q  34 ataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatga 133  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  22501148 ataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatataaga 22501049  T
Q  134 tgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||| ||| |||||| | ||||||||||||||||||||||| ||||    
T  22501048 tgattaatattgatggtaacttgctgcatatgtttaaatgatgctgtc 22501001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 34 - 180
Target Start/End: Complemental strand, 22509082 - 22508935
Alignment:
Q  34 ataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatga 133  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  22509082 ataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatataatgtgaaagacgttgatatgaagttgtaattgttatataaga 22508983  T
Q  134 tgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||| ||| |||||| | ||||||||||||||||||||||| ||||    
T  22508982 tgattaatattgatggtaacttgctgcatatgtttaaatgatgctgtc 22508935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 23 - 180
Target Start/End: Original strand, 7672240 - 7672392
Alignment:
Q  23 agagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaatt 122  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||    
T  7672240 agagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaag------tt 7672333  T
Q  123 gttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    |||||||| |||||||||||| |||||||| ||| |||||| |||||||||||| ||||    
T  7672334 gttatataagatgattattattgatggtgacttgatgcatacgtttaaatgatgctgtc 7672392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 2524410 - 2524526
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  2524410 cagagagtatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatcaaattgtaat 2524509  T
Q  122 tgttatatatgatgatt 138  Q
    ||||| |||||||||||    
T  2524510 tgttacatatgatgatt 2524526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 6576543 - 6576403
Alignment:
Q  24 gagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattg 123  Q
    ||||| |||||||||||||||||| ||   ||||||  |||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||| |    
T  6576543 gagagtatgaataagatgattaatgttgtggatttaagttgatgattaaaagtgaaaaaatttatatattgtgaaagatgttgatatgaagttgtaatgg 6576444  T
Q  124 ttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||| ||||||||||| | |||| ||| |||||||||||    
T  6576443 ttatatttgatgattattgttgatgttgacttgctgcatat 6576403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 22501195 - 22501128
Alignment:
Q  81 atatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatg 148  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||    
T  22501195 atatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatg 22501128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 22509129 - 22509062
Alignment:
Q  81 atatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatg 148  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||    
T  22509129 atatttatataatgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatg 22509062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 24883713 - 24883630
Alignment:
Q  81 atatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| |||||||||||    
T  24883713 atatttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 24883630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 24436321 - 24436258
Alignment:
Q  62 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgtta 126  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||| ||||    
T  24436321 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaaattgtaatggtta 24436258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 24781643 - 24781715
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||||||  ||||||||||||||||||| |||||||  |||||||||| | |||| ||| |||||||||||    
T  24781643 ttgtgaaagttgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 24781715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 5032127 - 5032199
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||||| | |||||||||||||| |||| |||||||  |||||||||| | |||| ||| |||||||||||    
T  5032127 ttgtgaaaaatgttgatatgaagttataatggttatattggatgattattgttgatgttgacttgctgcatat 5032199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 14511 - 14352
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  14511 cagagaggatgaataagatgattaatattgatgatttactttgatgattaaatgtgaaaatattcatataatgtgaaagacgttgatatgaagttgtaat 14412  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||||||||||| ||||    
T  14411 tgttatataagatgattattattgatggtgacttgatgcatatgtttaaatgatgttgtc 14352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 6e-64; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 22 - 172
Target Start/End: Original strand, 20734128 - 20734279
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20734128 cagagaggatgaataaaatgatttatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 20734227  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatg 172  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  20734228 tgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatg 20734279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 2201277 - 2201139
Alignment:
Q  35 taagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgat 134  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2201277 taagatgattaatattgatgatttactttgatgattaaatatgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgat 2201178  T
Q  135 gattattatcgatggtga-ttgctgcatatgtttaaatg 172  Q
    ||||||||| |||||||| ||||||||||||| ||||||    
T  2201177 gattattattgatggtgacttgctgcatatgtctaaatg 2201139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 37 - 172
Target Start/End: Complemental strand, 22421123 - 22420987
Alignment:
Q  37 agatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatga 136  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22421123 agatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgttatatatgatga 22421024  T
Q  137 ttattatcgatggtga-ttgctgcatatgtttaaatg 172  Q
    ||||||| ||| |||| ||| ||||||||| ||||||    
T  22421023 ttattattgatagtgacttgttgcatatgtctaaatg 22420987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 34296953 - 34297092
Alignment:
Q  25 agaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgt 124  Q
    |||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34296953 agaggatgaataagatgattaataatgatgatttactttgatgattagatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgt 34297052  T
Q  125 tatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||||||||||||||||  ||| ||| |||||||||||    
T  34297053 tatatatgatgattattattaatgttgacttgctgcatat 34297092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 27851373 - 27851213
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa- 120  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  27851373 cagagaggatgaataagatgatttatattgatgatttaccttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 27851274  T
Q  121 ttgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||||||| ||||||||| |||||| | ||| ||  ||||||||||||||| ||||    
T  27851273 ttgttatatatgaagattattattgatggttacttgttgtgtatgtttaaatgatgttgtc 27851213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 19399895 - 19399787
Alignment:
Q  56 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-tt 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||| | |||| ||| ||    
T  19399895 tttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgactt 19399796  T
Q  155 gctgcatat 163  Q
    |||||||||    
T  19399795 gctgcatat 19399787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 25956537 - 25956697
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 120  Q
    |||||||||||| |||||||||| ||||||  |||||||| |||||||||||||||||||| || |||||| ||||||||  ||||||||| ||||| ||    
T  25956537 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaa 25956636  T
Q  121 ttgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
     |||||||||||| ||||||||| |||||| | |||||| |||||||||||||||| ||||    
T  25956637 atgttatatatgaagattattattgatggttacttgctgtatatgtttaaatgatgttgtc 25956697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 25956715 - 25956803
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||| ||| ||| |||||||||||    
T  25956715 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattatt 25956803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 18927954 - 18927853
Alignment:
Q  62 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgca 160  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| ||||||||    
T  18927954 ttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 18927856  T
Q  161 tat 163  Q
    |||    
T  18927855 tat 18927853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 160
Target Start/End: Complemental strand, 27851195 - 27851087
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtg 151  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||| | ||||||||||||||| | ||| ||| ||||||||||| |||||| ||    
T  27851195 atgatttactttgatgcttaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtattggttgtatttgatgattattgtcgatgttg 27851097  T
Q  152 a-ttgctgca 160  Q
    | ||||||||    
T  27851096 acttgctgca 27851087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 31630622 - 31630709
Alignment:
Q  53 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||| |||| ||| |||  ||||||||||    
T  31630622 tgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttataatggttgtattagatgattatt 31630709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 27322221 - 27322293
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| |||||||||||    
T  27322221 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 27322293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 28708754 - 28708651
Alignment:
Q  62 ttgatgattaaatgtga-aaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgc 159  Q
    |||||||||||||||   ||| ||||||||||||||||||| | | ||| ||||||||||| |||||||  |||||||||| | |||| ||| |||||||    
T  28708754 ttgatgattaaatgtacgaaagatttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgattattgttgatgttgacttgctgc 28708655  T
Q  160 atat 163  Q
    ||||    
T  28708654 atat 28708651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 18708749 - 18708700
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||||||||    
T  18708749 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattatt 18708700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 141
Target Start/End: Original strand, 23151069 - 23151118
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||||||||    
T  23151069 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattatt 23151118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 2e-57; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 12328538 - 12328666
Alignment:
Q  24 gagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattg 123  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12328538 gagaggatgaataagatgattaatattgatgatttactttgatgattaaatttgaaaatatttatatattgtgaaagacgttgatatgaagatgtaattg 12328637  T
Q  124 ttatatatgatgattattatcgatggtga 152  Q
    |||||||||||||||||||| ||||||||    
T  12328638 ttatatatgatgattattattgatggtga 12328666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 51274290 - 51274420
Alignment:
Q  43 ttaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatta 142  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  51274290 ttaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagatgttgatatgaagttgtaattgttatataagatgattatta 51274389  T
Q  143 tcgatggtga-ttgctgcatatgtttaaatg 172  Q
    | |||||||| ||| ||||||||||||||||    
T  51274390 ttgatggtgacttgatgcatatgtttaaatg 51274420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 8885555 - 8885447
Alignment:
Q  35 taagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgat 134  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  8885555 taagatgattaatattgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaattgtaatatatgat 8885456  T
Q  135 gattattat 143  Q
    |||| ||||    
T  8885455 gattgttat 8885447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 143
Target Start/End: Complemental strand, 51326974 - 51326893
Alignment:
Q  62 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattat 143  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51326974 ttgatgattaaatgtgaacatatttatatattatgaaagacgttgatatgaagttgtaattgttatatatgttgattattat 51326893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 28194365 - 28194525
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 120  Q
    |||||| ||||| || ||||||| ||||||  |||||||| |||||||||||||||||||| || |||||| ||||||||  ||||||||| ||||| ||    
T  28194365 cagagaagatgattaggatgatttaatattgttgatttacgttgatgattaaatgtgaaaaaatctatataatgtgaaagttgttgatatgtagttgcaa 28194464  T
Q  121 ttgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
     |||||||||||| ||||||||| |||||| | |||||| |||||||||||||||| ||||    
T  28194465 atgttatatatgaagattattattgatggttacttgctgtatatgtttaaatgatgttgtc 28194525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 43697578 - 43697418
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 120  Q
    |||||||||||| |||||||||| ||||||  |||||||  |||||||||||||||||||| || |||||| ||||||||  ||||||||| ||||| ||    
T  43697578 cagagaggatgattaagatgatttaatattgttgatttaagttgatgattaaatgtgaaaagatctatatagtgtgaaagttgttgatatggagttgcaa 43697479  T
Q  121 ttgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
     |||||||||||| ||||||||| | |||| | |||||| ||||||||| |||||| ||||    
T  43697478 atgttatatatgaagattattattgttggttacttgctgtatatgtttatatgatgctgtc 43697418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 28194543 - 28194631
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||||||    
T  28194543 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgattatt 28194631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 43543137 - 43543069
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  43543137 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaat 43543069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 43697400 - 43697312
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| | |||| ||||||||||||||| | ||||||||||||||||| ||| ||| |||||||||||    
T  43697400 atgatttactttgatgattaa-tgtgagattattgatatattgtgaaagatgctgatatgaagttgtaatggttttatttgatgattatt 43697312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 46382652 - 46382737
Alignment:
Q  53 tgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||||||||| ||||| ||||||||||  |||||||||| ||||||||||||||||||| ||| |||  ||||||||||    
T  46382652 tgatttactttgatgattaa-tgtgagaatatttata--ttgtgaaagatgttgatatgaagttgtaatggttttattagatgattatt 46382737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 20636961 - 20636883
Alignment:
Q  103 gttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||| |||||||||||||||||||| ||||  |||||||| |||||| | |||||| |||||||||||||||| ||||    
T  20636961 gttgacatgaagttgtaattgttatacatgaatattattattgatggttacttgctgtatatgtttaaatgatgttgtc 20636883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 48301121 - 48301040
Alignment:
Q  83 atttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||  ||| |||||| | |||| ||| |||||||||||    
T  48301121 atttatatattgtgaaagatgttgatatgaagttgtaatggttacatgagattattattgttgatgttgacttgctgcatat 48301040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 174
Target Start/End: Complemental strand, 49261452 - 49261380
Alignment:
Q  103 gttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgat 174  Q
    |||||||||||||||||||||||||| |||| ||||||||| |||||| | ||| |  |||||||||||||||    
T  49261452 gttgatatgaagttgtaattgttatacatgaagattattattgatggttacttgttatatatgtttaaatgat 49261380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 107; Significance: 8e-54; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 4786 - 4660
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4786 cagagaggatgaataagatgattaataatgatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 4687  T
Q  122 tgttatatatgatgattattatcgatg 148  Q
    ||||||||||||| |||||||| ||||    
T  4686 tgttatatatgattattattattgatg 4660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 368 - 242
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  368 cagagaggatgaataagatgattaataatgatgatttactttgatgattatatgtgaaaatatttatatattgtgaaagacgttgatatgaaattgtaat 269  T
Q  122 tgttatatatgatgattattatcgatg 148  Q
    ||||||||||||| |||||||| ||||    
T  268 tgttatatatgattattattattgatg 242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 35 - 180
Target Start/End: Complemental strand, 11053 - 10907
Alignment:
Q  35 taagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgat 134  Q
    ||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  11053 taagatgattaatgttgatgatttactatgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaatttttaattgttatatatgat 10954  T
Q  135 gattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||| ||| |||| ||||||||||||||||||||||| ||||    
T  10953 gattattattgattgtgacttgctgcatatgtttaaatgatgttgtc 10907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 611 - 496
Alignment:
Q  66 tgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatg 164  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  611 tgattaaatgagaaaatatttatatattgtgaaagacgttgatatgaaattataattgttatatatgatgattattattgatggtgacttgctgcatatg 512  T
Q  165 tttaaatgatgatgtc 180  Q
    || |||||||| ||||    
T  511 ttaaaatgatgttgtc 496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 77; Significance: 7e-36; HSPs: 4)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 43700 - 43860
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 120  Q
    |||||||||||| |||||||||| ||||||  |||||||| |||||||||||||||||||| || |||||| ||||||||  ||||||||| ||||| ||    
T  43700 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatggagttgcaa 43799  T
Q  121 ttgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
     |||||||||||| ||||||||| |||||| | |||||| |||||||||||||||| ||||    
T  43800 atgttatatatgaagattattattgatggttacttgctgtatatgtttaaatgatgttgtc 43860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 47620 - 47780
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaa 120  Q
    |||||||||||| |||||||||| ||||||  |||||||| |||||||||||||||||||| || |||||| ||||||||  ||||||||| ||||| ||    
T  47620 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatataatgtgaaagttgttgatatgtagttgcaa 47719  T
Q  121 ttgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
     |||||||||||| ||||||||| |||||| | ||| || |||||||||||||||| ||||    
T  47720 atgttatatatgaagattattattgatggttacttgttgtatatgtttaaatgatgttgtc 47780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 43878 - 43966
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||| ||| ||| |||||||||||    
T  43878 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattatt 43966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 47798 - 47837
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatat 92  Q
    ||||||||||||||||||| ||||||| |||||||||||||    
T  47798 atgatttactttgatgatt-aatgtgagaatatttatatat 47837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 6770 - 6859
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||| |||||||||||    
T  6770 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatggagttgtaatgattatatttgatgattatt 6859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 169
Target Start/End: Original strand, 15419 - 15556
Alignment:
Q  33 aataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatg 132  Q
    ||||||||||||||| ||  |||||||  |||||||||||||||||||||||||||||||||||||| | |||||||||||||||  ||||||||||  |    
T  15419 aataagatgattaatgttgttgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatattcg 15518  T
Q  133 atgattattatcgatggtga-ttgctgcatatgtttaa 169  Q
    |||||||| || |||| ||| ||||||||||| |||||    
T  15519 atgattatcattgatgttgatttgctgcatatatttaa 15556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 169
Target Start/End: Original strand, 24477 - 24614
Alignment:
Q  33 aataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatg 132  Q
    ||||||||||||||| ||  |||||||  |||||||||||||||||||||||||||||||||||||| | |||||||||||||||  ||||||||||  |    
T  24477 aataagatgattaatgttgttgatttaagttgatgattaaatgtgaaaatatttatatattgtgaaaaatgttgatatgaagttgcgattgttatattcg 24576  T
Q  133 atgattattatcgatggtga-ttgctgcatatgtttaa 169  Q
    |||||||| || |||| ||| ||||||||||| |||||    
T  24577 atgattatcattgatgttgatttgctgcatatatttaa 24614  T

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Target: scaffold0080 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 59295 - 59437
Alignment:
Q  30 atgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatat 129  Q
    |||||||||||||||||| ||   ||||||  |||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  59295 atgaataagatgattaatgttgtggatttaagttgatgattaaatgtgaaag-atttatatattgtgaaagatgttgatatgaagttgtaattgttatat 59393  T
Q  130 atgatgattattatcgatggtga-ttgctgcatatgtttaaatg 172  Q
      |||||||||| | |||| ||| ||||||||||| ||| ||||    
T  59394 tggatgattattgttgatgttgacttgctgcatattttttaatg 59437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 36142 - 36230
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||  ||||||||||    
T  36142 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttatattagatgattatt 36230  T

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Target: scaffold0009 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 85275 - 85187
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||||||    
T  85275 atgatttactttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatagttgtatttgatgattatt 85187  T

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Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 85371 - 85300
Alignment:
Q  103 gttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatga 173  Q
    ||||||||| ||||| || |||||||||||| ||||||||| |||||| | ||| || ||||||||||||||    
T  85371 gttgatatggagttgcaaatgttatatatgaagattattattgatggttacttgatgtatatgtttaaatga 85300  T

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Target: scaffold0371 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 163
Target Start/End: Complemental strand, 3234 - 3093
Alignment:
Q  22 cagagaggatgaataagatgattaatattaatgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||| |||||||||||||||||| ||   ||||||  |||||||||||||||||||  |||||||||| |||||| | |||||||||||||||||||    
T  3234 cagagagtatgaataagatgattaatgttgtggatttaagttgatgattaaatgtgaaag-atttatatatcgtgaaaaatgttgatatgaagttgtaat 3136  T
Q  122 tgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
     |||||||  |||||||||| | |||| ||| |||||||||||    
T  3135 ggttatattggatgattattgttgatgttgacttgctgcatat 3093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 3063 - 2984
Alignment:
Q  61 tttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||||||    
T  3063 tttgatgattaa-tgtgagaatatttatatattgtgaaagatgttgatatgaagttgtaatggttgtatttgatgattatt 2984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 3136 - 3066
Alignment:
Q  22 cagagaggatgaataagatgatt-aatattaatgatttactttgatgattaaatgtgaaaatatttatata 91  Q
    |||||||||||| |||||||||| ||||||  |||||||| |||||||||||||||||||| || ||||||    
T  3136 cagagaggatgattaagatgatttaatattgttgatttacgttgatgattaaatgtgaaaagatctatata 3066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 935 - 834
Alignment:
Q  62 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgca 160  Q
    |||||||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| ||||||||    
T  935 ttgatgattaaatgtgaaag-attaatatattgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 837  T
Q  161 tat 163  Q
    |||    
T  836 tat 834  T

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Target: scaffold0513 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 10963 - 11051
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||| | ||||| |||||||||||||||| ||||| ||||||||||||||||||| ||| |||  ||||||||||    
T  10963 atgatttactttgatgattta-tgtgagaatatttatatattgtaaaagatgttgatatgaagttgtaatggttgtattagatgattatt 11051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 363032 - 362964
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaat 121  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  363032 atgatttactttgatgattaa-tgtgagaatatttatatattttgaaagatgttgatatgaagttgtaat 362964  T

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Target: scaffold0001 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 77019 - 76942
Alignment:
Q  62 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||||||||||  ||||||||||||||||| || |||||||||||||||| |||||||  ||||||||||    
T  77019 ttgatgattaaatgtgaaaat--ttatatattgtgaaagatgtggatatgaagttgtaatggttatattggatgattatt 76942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 5478 - 5556
Alignment:
Q  62 ttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    |||||||||||||||||||  ||||||||||||||||||  |||||||||||||||||||  ||||||  ||||||||||    
T  5478 ttgatgattaaatgtgaaag-atttatatattgtgaaaggtgttgatatgaagttgtaatgtttatattggatgattatt 5556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 8379 - 8466
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||| || || |||||| |||||||||||| || | |||||||||||||||||  || ||| |||||||||||    
T  8379 atgatttactttgatgattaa-tgagagaatatt-atatattgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattatt 8466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 10029 - 10101
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| |||||||||||    
T  10029 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 10101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 2449 - 2552
Alignment:
Q  62 ttgatgattaaatgtga-aaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgc 159  Q
    |||||||||||||||   ||| ||||||||||||||||||| | | ||| ||||||||||| |||||||  |||||||||| | |||| ||| |||||||    
T  2449 ttgatgattaaatgtacgaaagatttatatattgtgaaagatgctcataagaagttgtaatggttatattggatgattattgttgatgttgacttgctgc 2548  T
Q  160 atat 163  Q
    ||||    
T  2549 atat 2552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 9106 - 9177
Alignment:
Q  93 tgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    ||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| |||||||||||    
T  9106 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatat 9177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 8189 - 8261
Alignment:
Q  92 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatat 163  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||||| || | |||| ||| |||||||||||    
T  8189 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattgttgttgatgttgacttgctgcatat 8261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 2300 - 2378
Alignment:
Q  103 gttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcatatgtttaaatgatgatgtc 180  Q
    ||||||||||||||| ||||||| || |||| ||||||||  |||||| | ||| || |||||||||||||||| ||||    
T  2300 gttgatatgaagttgaaattgttgtacatgaagattattaatgatggttacttgttgtatatgtttaaatgatgctgtc 2378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 24739 - 24826
Alignment:
Q  52 atgatttactttgatgattaaatgtgaaaatatttatatattgtgaaagacgttgatatgaagttgtaattgttatatatgatgattatt 141  Q
    ||||||||||||||||||||  || || |||||| |||||||||| | || | |||||||||||||||||  || ||| |||||||||||    
T  24739 atgatttactttgatgattat-tgagagaatatt-atatattgtggatgatgatgatatgaagttgtaatgattgtatttgatgattatt 24826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 24676 - 24704
Alignment:
Q  115 ttgtaattgttatatatgatgattattat 143  Q
    |||||||||||||||||||||||||||||    
T  24676 ttgtaattgttatatatgatgattattat 24704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Complemental strand, 9955 - 9927
Alignment:
Q  115 ttgtaattgttatatatgatgattattat 143  Q
    |||||||||||||||||||||||||||||    
T  9955 ttgtaattgttatatatgatgattattat 9927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 7670 - 7698
Alignment:
Q  115 ttgtaattgttatatatgatgattattat 143  Q
    |||||||||||||||||||||||||||||    
T  7670 ttgtaattgttatatatgatgattattat 7698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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