View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0495_low_2 (Length: 410)

Name: NF0495_low_2
Description: NF0495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0495_low_2
NF0495_low_2
[»] chr7 (49 HSPs)
chr7 (195-402)||(11685331-11685538)
chr7 (28-325)||(45464686-45464983)
chr7 (19-171)||(11684057-11684209)
chr7 (195-328)||(34784308-34784441)
chr7 (28-325)||(4321375-4321670)
chr7 (34-324)||(2168358-2168649)
chr7 (28-325)||(34692253-34692554)
chr7 (19-370)||(38614327-38614669)
chr7 (96-325)||(1547241-1547467)
chr7 (44-329)||(3690440-3690725)
chr7 (28-325)||(48302444-48302741)
chr7 (216-325)||(30108857-30108966)
chr7 (28-186)||(30109024-30109182)
chr7 (44-326)||(36756398-36756681)
chr7 (44-326)||(36762195-36762478)
chr7 (19-325)||(23954794-23955099)
chr7 (254-325)||(19712014-19712085)
chr7 (195-326)||(36766074-36766205)
chr7 (19-310)||(46994970-46995261)
chr7 (196-310)||(40785216-40785330)
chr7 (195-329)||(46810995-46811129)
chr7 (215-329)||(7403476-7403590)
chr7 (195-323)||(8421712-8421840)
chr7 (210-328)||(13036191-13036309)
chr7 (195-329)||(45360929-45361062)
chr7 (303-380)||(19712098-19712175)
chr7 (195-323)||(35342722-35342850)
chr7 (195-327)||(37791965-37792097)
chr7 (194-328)||(23904917-23905052)
chr7 (195-325)||(6605032-6605162)
chr7 (195-329)||(13169302-13169435)
chr7 (195-329)||(39857999-39858133)
chr7 (195-325)||(47384608-47384738)
chr7 (81-186)||(48705396-48705499)
chr7 (39-124)||(40785079-40785164)
chr7 (195-267)||(48850929-48851001)
chr7 (273-328)||(12904046-12904101)
chr7 (210-328)||(48311427-48311543)
chr7 (239-329)||(3921007-3921096)
chr7 (138-225)||(12903939-12904026)
chr7 (195-325)||(38549845-38549975)
chr7 (196-328)||(22155495-22155626)
chr7 (196-328)||(22211410-22211541)
chr7 (195-327)||(38472573-38472705)
chr7 (197-328)||(34775362-34775493)
chr7 (108-162)||(8421867-8421921)
chr7 (334-380)||(34784243-34784289)
chr7 (261-317)||(27956933-27956988)
chr7 (292-328)||(48227707-48227743)
[»] chr8 (46 HSPs)
chr8 (195-402)||(11031621-11031828)
chr8 (28-325)||(40019448-40019745)
chr8 (117-328)||(25356622-25356834)
chr8 (19-329)||(33369050-33369362)
chr8 (28-316)||(28432520-28432807)
chr8 (195-325)||(10269206-10269336)
chr8 (39-329)||(461467-461756)
chr8 (39-325)||(33158951-33159236)
chr8 (19-328)||(9876053-9876361)
chr8 (195-325)||(9186302-9186432)
chr8 (30-328)||(38881691-38881992)
chr8 (195-325)||(10268093-10268223)
chr8 (95-325)||(44620244-44620472)
chr8 (44-329)||(1321829-1322115)
chr8 (197-329)||(10770636-10770768)
chr8 (223-328)||(25373335-25373440)
chr8 (248-329)||(25705571-25705652)
chr8 (74-329)||(42895061-42895317)
chr8 (195-325)||(15684048-15684178)
chr8 (222-328)||(25402504-25402610)
chr8 (222-328)||(25707013-25707119)
chr8 (195-300)||(12515395-12515499)
chr8 (210-329)||(11719746-11719865)
chr8 (262-329)||(25370798-25370865)
chr8 (195-328)||(17807313-17807446)
chr8 (195-326)||(11790496-11790627)
chr8 (19-162)||(33748793-33748935)
chr8 (195-329)||(31823142-31823276)
chr8 (195-329)||(32823938-32824072)
chr8 (305-402)||(9186447-9186544)
chr8 (41-186)||(25371636-25371781)
chr8 (210-329)||(24527184-24527303)
chr8 (211-329)||(37525149-37525267)
chr8 (195-329)||(41041032-41041166)
chr8 (195-328)||(13484831-13484964)
chr8 (39-124)||(37525333-37525418)
chr8 (117-229)||(8655640-8655752)
chr8 (195-328)||(41824261-41824394)
chr8 (195-323)||(31199781-31199909)
chr8 (195-310)||(33748644-33748759)
chr8 (195-328)||(22273535-22273668)
chr8 (314-402)||(10267998-10268086)
chr8 (195-327)||(29693963-29694095)
chr8 (44-91)||(32823816-32823863)
chr8 (19-72)||(11719994-11720047)
chr8 (19-72)||(31822975-31823028)
[»] chr2 (30 HSPs)
chr2 (28-325)||(11021825-11022122)
chr2 (28-325)||(28247677-28247974)
chr2 (195-325)||(363354-363485)
chr2 (36-325)||(11313127-11313402)
chr2 (28-325)||(38149538-38149836)
chr2 (195-325)||(7744932-7745062)
chr2 (117-327)||(10715400-10715607)
chr2 (195-328)||(17948601-17948734)
chr2 (28-329)||(37418266-37418569)
chr2 (202-325)||(2359394-2359516)
chr2 (19-325)||(35575-35881)
chr2 (47-328)||(42880329-42880610)
chr2 (195-329)||(34400628-34400762)
chr2 (195-329)||(42517877-42518011)
chr2 (195-323)||(15373554-15373683)
chr2 (68-228)||(40150664-40150825)
chr2 (117-329)||(40152135-40152346)
chr2 (196-328)||(17697776-17697903)
chr2 (195-329)||(19907036-19907170)
chr2 (44-162)||(42002990-42003108)
chr2 (195-323)||(41708097-41708225)
chr2 (28-66)||(10715644-10715682)
chr2 (195-309)||(26581316-26581430)
chr2 (248-329)||(16377082-16377163)
chr2 (273-328)||(4047703-4047758)
chr2 (314-352)||(363509-363547)
chr2 (287-328)||(161813-161854)
chr2 (283-328)||(2359542-2359587)
chr2 (195-267)||(14387765-14387837)
chr2 (195-323)||(31474719-31474847)
[»] chr1 (27 HSPs)
chr1 (28-325)||(5784369-5784666)
chr1 (19-328)||(42558248-42558546)
chr1 (95-325)||(51123115-51123342)
chr1 (31-325)||(11152837-11153130)
chr1 (195-312)||(25172701-25172818)
chr1 (44-329)||(45379374-45379658)
chr1 (19-329)||(31803190-31803500)
chr1 (19-329)||(46637056-46637365)
chr1 (44-323)||(44158807-44159088)
chr1 (44-329)||(42135761-42136045)
chr1 (197-329)||(6576774-6576906)
chr1 (44-329)||(35478378-35478660)
chr1 (195-329)||(50554500-50554634)
chr1 (19-162)||(18183063-18183205)
chr1 (198-329)||(33679549-33679680)
chr1 (195-329)||(31237139-31237273)
chr1 (195-328)||(18058121-18058254)
chr1 (195-325)||(15105986-15106116)
chr1 (195-328)||(6817200-6817333)
chr1 (196-278)||(18180818-18180900)
chr1 (195-328)||(45045232-45045365)
chr1 (195-310)||(27952167-27952282)
chr1 (195-329)||(2870712-2870845)
chr1 (195-329)||(3012175-3012309)
chr1 (44-162)||(33679696-33679814)
chr1 (287-325)||(33599542-33599580)
chr1 (334-402)||(25172876-25172944)
[»] chr3 (38 HSPs)
chr3 (21-329)||(26448037-26448342)
chr3 (107-327)||(30501391-30501610)
chr3 (121-325)||(40962981-40963184)
chr3 (19-327)||(1847154-1847462)
chr3 (28-325)||(41945603-41945898)
chr3 (31-327)||(32842721-32843017)
chr3 (95-321)||(49494787-49495011)
chr3 (28-329)||(48634872-48635173)
chr3 (40-329)||(24382004-24382293)
chr3 (210-325)||(37865676-37865791)
chr3 (48-310)||(31885827-31886088)
chr3 (195-329)||(2975749-2975883)
chr3 (216-325)||(33051144-33051253)
chr3 (28-153)||(37886239-37886364)
chr3 (28-229)||(23775152-23775353)
chr3 (19-227)||(33112233-33112441)
chr3 (31-329)||(35861831-35862129)
chr3 (19-171)||(45897487-45897640)
chr3 (44-329)||(18429030-18429314)
chr3 (44-329)||(45255773-45256058)
chr3 (19-157)||(2975887-2976024)
chr3 (44-310)||(33851291-33851555)
chr3 (195-328)||(2378576-2378709)
chr3 (195-328)||(42282135-42282268)
chr3 (103-310)||(10380511-10380719)
chr3 (195-329)||(610850-610984)
chr3 (195-325)||(51686013-51686143)
chr3 (195-328)||(17516608-17516741)
chr3 (195-328)||(21350257-21350390)
chr3 (195-328)||(30598658-30598791)
chr3 (197-329)||(44268301-44268432)
chr3 (195-329)||(23887489-23887622)
chr3 (195-329)||(27897512-27897646)
chr3 (195-328)||(23875963-23876095)
chr3 (203-328)||(45897342-45897467)
chr3 (28-72)||(13466611-13466655)
chr3 (195-329)||(23291889-23292023)
chr3 (334-380)||(30501321-30501367)
[»] chr4 (35 HSPs)
chr4 (28-325)||(39922509-39922806)
chr4 (28-325)||(39084654-39084951)
chr4 (28-325)||(39190321-39190618)
chr4 (28-325)||(42879576-42879873)
chr4 (28-325)||(43778681-43778976)
chr4 (28-325)||(5485554-5485851)
chr4 (28-325)||(44993100-44993397)
chr4 (195-324)||(13438146-13438275)
chr4 (129-314)||(25994708-25994897)
chr4 (195-325)||(230740-230869)
chr4 (28-325)||(32653133-32653430)
chr4 (19-329)||(4519959-4520270)
chr4 (44-310)||(44556917-44557183)
chr4 (196-268)||(39294553-39294625)
chr4 (45-329)||(27626246-27626530)
chr4 (39-328)||(51041027-51041314)
chr4 (215-327)||(28100865-28100977)
chr4 (195-327)||(13449984-13450107)
chr4 (195-329)||(2691684-2691818)
chr4 (195-328)||(20820290-20820423)
chr4 (51-329)||(35997284-35997568)
chr4 (302-378)||(39294645-39294721)
chr4 (195-323)||(47942413-47942541)
chr4 (195-328)||(54387537-54387670)
chr4 (195-310)||(44793243-44793358)
chr4 (195-329)||(11254378-11254512)
chr4 (28-133)||(10544500-10544605)
chr4 (238-323)||(10544693-10544778)
chr4 (248-329)||(26397635-26397715)
chr4 (195-328)||(49524394-49524527)
chr4 (195-329)||(35402069-35402202)
chr4 (302-380)||(230650-230728)
chr4 (291-328)||(42982211-42982248)
chr4 (292-328)||(20494146-20494182)
chr4 (19-59)||(27385940-27385980)
[»] chr6 (12 HSPs)
chr6 (28-325)||(17950853-17951149)
chr6 (28-325)||(35174674-35174971)
chr6 (31-327)||(17936042-17936339)
chr6 (28-325)||(34344827-34345123)
chr6 (197-325)||(4289710-4289838)
chr6 (203-376)||(31210129-31210313)
chr6 (195-329)||(33277101-33277234)
chr6 (195-328)||(7371453-7371586)
chr6 (203-327)||(30639903-30640027)
chr6 (210-329)||(11356803-11356922)
chr6 (248-325)||(33267342-33267419)
chr6 (239-315)||(14337985-14338061)
[»] chr5 (33 HSPs)
chr5 (195-329)||(1344478-1344612)
chr5 (28-325)||(42619581-42619872)
chr5 (200-325)||(24497749-24497874)
chr5 (28-329)||(38176923-38177224)
chr5 (28-329)||(38204147-38204448)
chr5 (19-329)||(18726853-18727164)
chr5 (19-325)||(35291343-35291644)
chr5 (19-310)||(40330004-40330296)
chr5 (195-327)||(1343482-1343614)
chr5 (95-325)||(27350095-27350322)
chr5 (19-329)||(32089411-32089725)
chr5 (28-310)||(32836186-32836467)
chr5 (19-172)||(43317176-43317329)
chr5 (95-329)||(6116465-6116700)
chr5 (19-171)||(18341593-18341745)
chr5 (195-329)||(18623765-18623899)
chr5 (195-329)||(32134556-32134690)
chr5 (47-310)||(35400226-35400489)
chr5 (318-402)||(24497885-24497969)
chr5 (195-328)||(34328466-34328600)
chr5 (195-328)||(12738337-12738470)
chr5 (195-328)||(12801160-12801293)
chr5 (195-328)||(27077123-27077256)
chr5 (195-328)||(33257426-33257559)
chr5 (198-316)||(41494167-41494285)
chr5 (248-329)||(30464263-30464344)
chr5 (248-328)||(28035772-28035852)
chr5 (19-66)||(33257262-33257309)
chr5 (239-329)||(28821770-28821860)
chr5 (291-325)||(29620495-29620529)
chr5 (291-327)||(8541036-8541072)
chr5 (248-328)||(19998149-19998229)
chr5 (28-72)||(27076966-27077010)
[»] scaffold0006 (1 HSPs)
scaffold0006 (95-323)||(37856-38082)
[»] scaffold0070 (1 HSPs)
scaffold0070 (108-329)||(57669-57890)
[»] scaffold1041 (2 HSPs)
scaffold1041 (262-329)||(2643-2710)
scaffold1041 (262-329)||(2356-2423)
[»] scaffold0722 (1 HSPs)
scaffold0722 (200-329)||(4446-4574)
[»] scaffold0564 (1 HSPs)
scaffold0564 (195-328)||(9533-9666)
[»] scaffold0345 (1 HSPs)
scaffold0345 (210-329)||(1164-1283)


Alignment Details
Target: chr7 (Bit Score: 156; Significance: 9e-83; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 195 - 402
Target Start/End: Original strand, 11685331 - 11685538
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  11685331 attaggttttgaagctttttgaattggtgaagaacgttacctctaattattgaaagaaattttggagattttggagtgtagattacagattgtaaaatta 11685430  T
Q  295 gggttccaattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattgg 394  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| |    
T  11685431 gggttccaattttatatatttgggggagaaagagcaaagcattttctacaaatcaatcaatttgatccttggaaattttggtcgctatcgaccacattag 11685530  T
Q  395 tctctgct 402  Q
    || |||||    
T  11685531 tccctgct 11685538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 28 - 325
Target Start/End: Original strand, 45464686 - 45464983
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| ||    
T  45464686 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttag 45464785  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| | |||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  45464786 attcaatttcaacagtattgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttggggaaga 45464885  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  |||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  45464886 acgtgacccttaattattgaaagaaaatttggagattttggagtgtagattacacattgtaaaattagagttccaattttatatatttgaggaagaaa 45464983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 11684057 - 11684209
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgc-ttttgcccttacacccacccctc 117  Q
    ||||| || |||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||    
T  11684057 ggacaccaacattcaagtactctcacatcaccattaaacatggagcttaaagatgaagctcgactttcataattgctttttgcccttaca-ccacccctc 11684155  T
Q  118 atcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttg 171  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  11684156 atcatttcggattcaaattgaacaattttgcttgaagaaattttggggattttg 11684209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 34784441 - 34784308
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||| | |||||||||  |||||||||||||||||| | ||||||||||||    
T  34784441 attagggtttggagttttttgaattggggaagaacgttaccactaattattgacataaattttggagattttggagtgtagattaaagattgtaaaatta 34784342  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    |||||||||||||||||||||| |||||||||||    
T  34784341 gggttccaattttatatatttggggaagaaagag 34784308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 4321670 - 4321375
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||| ||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| |||||||| ||    
T  4321670 cattcaagcactctcacatcaacattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccc-catcattttag 4321572  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || || | |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  4321571 attcaatttcaatagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgcaattttttgatttggggaaga 4321473  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| ||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  4321472 acgtgacccttaattattggaagaaaattttgagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggatgaaa 4321375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 34 - 324
Target Start/End: Original strand, 2168358 - 2168649
Alignment:
Q  34 agcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttg--cccttacacccacccctcatcatttcagattc 131  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||| ||||||||||| |  ||||   ||| ||  |||||||| |||||||| ||||||    
T  2168358 agcactctgacatcaccattaaacttggagcttgaagataaagctcgactttcataactattttttttcccatattcccacccc-catcattttagattc 2168456  T
Q  132 aaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgt 231  Q
    || || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||||||| |||||||||||| |||||||      
T  2168457 aatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacgaaaaaattagggtttgaagttttttgaattggagaagaactg 2168556  T
Q  232 taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaa 324  Q
     || ||| ||||||| | ||||||||||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||    
T  2168557 gactacttattattggaggaaattttggtgattttagagtgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaa 2168649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 28 - 325
Target Start/End: Original strand, 34692253 - 34692554
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    |||||||||| ||||||||||| |||||||||| ||  | ||||| |||||||||||| |||  |  |||||||| ||   | ||||| |||||||| ||    
T  34692253 cattcaagcattctcacatcactattaaacatgtaggatgaagatgaagcttgactttgatagctctttttgcccatatgactacccc-catcattttag 34692351  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta----ttag-ggtttgaagctttttgaattggg 222  Q
    |||||| || || | |||||||||||  |||||||  |||||||  |||| ||||||||        |    |||| |||||| |  ||||||| |||||    
T  34692352 attcaatttcaatagttttgcttgaatgaattttgcagattttggttttcagattcaataaaaaaaaaaaaattagtggtttggaattttttgatttggg 34692451  T
Q  223 gaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaag 322  Q
    ||||||||| |||||||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||    
T  34692452 gaagaacgtgaccactaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatatatttggggaag 34692551  T
Q  323 aaa 325  Q
    |||    
T  34692552 aaa 34692554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 370
Target Start/End: Original strand, 38614327 - 38614669
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||| |||||||||||||||||||||| || |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||    
T  38614327 ggacaccaacatttaagcactctcacatcaccattagacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccacccc-ca 38614425  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 218  Q
    ||||||||||||||| || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||||||| |||||||||    
T  38614426 tcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacgaaaaaattagggtttgaagttttttgaat 38614525  T
Q  219 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 318  Q
     || |||||||   |||||| ||||||| | ||||||||||  ||||       |||||| || |||||  ||||||| ||||||||||||| |  || |    
T  38614526 cggagaagaactggaccacttattattggaggaaattttggtgattt-------tagattgcagattgtgtaattaggattccaattttatacagctggg 38614618  T
Q  319 gaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaat 370  Q
    ||||||||  |||| |||||||| ||||||||| |||||  ||||| |||||    
T  38614619 gaagaaag-ccaaaacattttctgcaaatcaatcaatttagtcctttgaaat 38614669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 96 - 325
Target Start/End: Original strand, 1547241 - 1547467
Alignment:
Q  96 tttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnnt 194  Q
    ||||||| |||||||||||| |||||||||  |||||| |  |||| ||||| |||||| |||||||| ||||||   |||||| |||||||            
T  1547241 tttgcccatacacccacccc-catcatttcgtattcaattacaacagttttgtttgaaggaattttggggatttttttatttcgaattcaatcaaaaa-- 1547337  T
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||| | | ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||| | ||||||||||||    
T  1547338 attagggtttgaggttatttcaatcggggaagaacgttaccactaattattgaaagaa-ttttgggaattttagagtgtggattaaagattgtaaaatta 1547436  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    ||||| |||||||||| ||||| ||||||||    
T  1547437 gggtttcaattttatacatttggggaagaaa 1547467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 44 - 329
Target Start/End: Complemental strand, 3690725 - 3690440
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    |||||||| ||||| |||||||| ||||| |||||||||||||||||    |||| ||| ||  ||||||||   ||||||||||||||| || || | |    
T  3690725 catcaccactaaacttggagcttgaagatgaagcttgactttcataacaattttttcccatattcccaccccatttcatttcagattcaatttcaatagt 3690626  T
Q  144 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 243  Q
    ||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| ||||||||||||||||||||   |||||| ||||    
T  3690625 tttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaattagggtttcaagttttttgaattggggaagaactggaccacttatta 3690526  T
Q  244 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  3690525 ttggaggaaatttaggtgattttagaatgtagattgcaaattgtgtaattagggttccaattttatacaattggggaagacagagc 3690440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 48302741 - 48302444
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    |||||||||||||||||||||||||||||||||||   | ||||| || ||||||||| |||  |  |||||||| ||   |||||||  |||||||  |    
T  48302741 cattcaagcactctcacatcaccattaaacatggaagatgaagatgaaacttgactttgatagctctttttgcccatatgaccacccccaatcatttttg 48302642  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
     ||||| || |||| |||||||||||  |||||||  |||||||  ||||  |||||||        ||||||||||| |  ||||||| ||||||||||    
T  48302641 tttcaatttcaacagttttgcttgaatgaattttgaagattttggttttcatattcaattaaaaaaaattagggtttgcaattttttgatttggggaaga 48302542  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| ||   ||||||||| ||| || |||||  ||||||||||||||| |||| ||||||||||||| ||| |||||||||||||||| ||||||||    
T  48302541 acgtgactcttaattattggaagcaaatttggagattttggagtgtagaatacacattgtaaaattagagtttcaattttatatatttggggaagaaa 48302444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 216 - 325
Target Start/End: Complemental strand, 30108966 - 30108857
Alignment:
Q  216 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 315  Q
    |||||||||||||||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30108966 aattggggaagaacgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatattt 30108867  T
Q  316 gaggaagaaa 325  Q
    | ||||||||    
T  30108866 ggggaagaaa 30108857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 28 - 186
Target Start/End: Complemental strand, 30109182 - 30109024
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| ||| ||  |||||||| ||   ||||| | |||||||| ||    
T  30109182 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagttctttttgcccatatgaccacctcccatcattttag 30109083  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat 186  Q
    |||||| || |||| |||||||||||  |||||||  |||||||| |||| ||||||||    
T  30109082 attcaatttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaat 30109024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 326
Target Start/End: Original strand, 36756398 - 36756681
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  36756398 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccccatcattttggattttatttcaatagt 36756497  T
Q  144 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 242  Q
    ||||||| |||||||||||  || ||||  |||  ||||||||        | ||||||||||||| ||||||||||||||||||||   |||||| |||    
T  36756498 tttgcttcaagaaattttgaggaatttggttttatgattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactaaaccacttatt 36756597  T
Q  243 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 326  Q
    |||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||    
T  36756598 attggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagggtttcaattttatacaattggggaagaaag 36756681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 44 - 326
Target Start/End: Original strand, 36762195 - 36762478
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  36762195 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccccatcattttggattttatttcaatagt 36762294  T
Q  144 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 242  Q
    ||||||| |||||||||||  || ||||  |||  ||||||||        | ||||||||||||| ||||||||||||||||||||   |||||| |||    
T  36762295 tttgcttcaagaaattttgaggaatttggttttatgattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactaaaccacttatt 36762394  T
Q  243 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 326  Q
    |||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||    
T  36762395 attggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagggtttcaattttatacaattggggaagaaag 36762478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 325
Target Start/End: Original strand, 23954794 - 23955099
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||||||| ||| ||||||||||| |||||||  ||||| ||||| || |||||||| || ||||  || ||  | |||||| |     
T  23954794 ggacaccaacattcaagcactctaacaacaccattaaacttggagctcgaagatgaagctcgattttcataactgtttttttccatattctcacccc-cg 23954892  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 218  Q
    |||||||||||||||  | || | |||||||| |||||||||||  ||||||   |||| ||||||||        |||||||||||||| || ||||||    
T  23954893 tcatttcagattcaatgtcaatagttttgcttcaagaaattttgaggattttagctttcagattcaataccaagaaattagggtttgaagtttgttgaat 23954992  T
Q  219 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 318  Q
    ||| |||||||   |||||| ||||||| | |||||||| |  ||||| ||||||||| |  | |||||  ||||||||||||||||||||| | ||| |    
T  23954993 tggcgaagaactggaccacttattattggaggaaatttttgttattttagagtgtagactgaagattgtgtaattagggttccaattttatacaattggg 23955092  T
Q  319 gaagaaa 325  Q
    |||||||    
T  23955093 gaagaaa 23955099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 325
Target Start/End: Original strand, 19712014 - 19712085
Alignment:
Q  254 ttttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19712014 ttttggaaattttggagtgtagattacagattgtaaaattagggttccaattttatatatttggggaagaaa 19712085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 36766074 - 36766205
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||| |||||    
T  36766074 attagggtttgaagttttttgaattggggaagaactaaaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtataatta 36766173  T
Q  295 gggttccaattttatatatttgaggaagaaag 326  Q
    ||||| |||||||||| | ||| |||||||||    
T  36766174 gggtttcaattttatacaattggggaagaaag 36766205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 310
Target Start/End: Complemental strand, 46995261 - 46994970
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | || |  || ||  |||||||| ||    
T  46995261 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccg-ttatttccatattcccaccccaca 46995163  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 217  Q
    ||||||||||||||| || || | |||||||| |||||||||||  |||| ||  ||||  ||||| |         ||||||||||| || ||||||||    
T  46995162 tcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattctggctttcaaattcactacgaaaaaaattagggtttggagttttttgaa 46995063  T
Q  218 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 310  Q
    |||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  ||||| |||||||||||||||    
T  46995062 ttggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaaggttccaattttata 46994970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 196 - 310
Target Start/End: Original strand, 40785216 - 40785330
Alignment:
Q  196 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 295  Q
    ||||||||||||| ||||||||||||||||||||   |||||| |||| || | ||||||||||  ||||||||||||||||| || |||||| ||||||    
T  40785216 ttagggtttgaagatttttgaattggggaagaactggaccacttattagtggaggaaattttggtgattttggagtgtagattgcagattgtacaattag 40785315  T
Q  296 ggttccaattttata 310  Q
    |||| ||||||||||    
T  40785316 ggttacaattttata 40785330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 46811129 - 46810995
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || | |||  |||||    
T  46811129 attagggtttgaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagactgtgtaatta 46811030  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    | |||||||||||||| | ||| | ||||||||||    
T  46811029 gagttccaattttatacaattgggaaagaaagagc 46810995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 7403476 - 7403590
Alignment:
Q  215 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 314  Q
    ||||||| ||||||||||  ||  ||||| || ||||||| ||||  |||||||| | ||||||||||||||||||| |||||||||||||| ||| |||    
T  7403476 gaattggagaagaacgttgtcatcaattaatggaagaaatcttggagattttggactctagattacatattgtaaaactagggttccaatttaatagatt 7403575  T
Q  315 tgaggaagaaagagc 329  Q
    || | ||||||||||    
T  7403576 tgggaaagaaagagc 7403590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 323
Target Start/End: Complemental strand, 8421840 - 8421712
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  8421840 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 8421741  T
Q  295 gggttccaattttatatatttgaggaaga 323  Q
    ||||| |||||||||||| ||| ||||||    
T  8421740 gggtttcaattttatataattggggaaga 8421712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 328
Target Start/End: Original strand, 13036191 - 13036309
Alignment:
Q  210 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 309  Q
    |||||||||||||||||||| ||  ||  ||||| || ||||||||||||| |||||| | | ||| | ||| ||| |||||| ||| |||||| |||||    
T  13036191 tttttgaattggggaagaactttgtcatcaattaatggaagaaattttggggattttgaactctaggtgacaaattataaaataaggattccaaatttat 13036290  T
Q  310 atatttgaggaagaaagag 328  Q
    ||||||| |||||||||||    
T  13036291 atatttggggaagaaagag 13036309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 329
Target Start/End: Original strand, 45360929 - 45361062
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  |||| ||| ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  45360929 attagggttttaagttttttgaattggggaagaacattgacatcaattcttgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 45361028  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| |||| ||||||| ||||||||||||    
T  45361029 gggttccaaattta-atatttggggaagaaagagc 45361062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 380
Target Start/End: Original strand, 19712098 - 19712175
Alignment:
Q  303 attttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcact 380  Q
    |||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||  ||||| ||| || ||||||||    
T  19712098 attttatatatttggggaagaaagggcaaaacattttcaacaaatcaattaatttagtcctttgaagttatggtcact 19712175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 323
Target Start/End: Complemental strand, 35342850 - 35342722
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| ||||||||||||||||||||   || ||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  35342850 attagggttttaagttttttgaattggggaagaactggactacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 35342751  T
Q  295 gggttccaattttatatatttgaggaaga 323  Q
    |||||||||||||||| | ||| ||||||    
T  35342750 gggttccaattttatacaattggggaaga 35342722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 327
Target Start/End: Complemental strand, 37792097 - 37791965
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| || |||  | ||   | |||||||||| || |||||| | | ||| | ||| ||| ||| ||||    
T  37792097 attagggttttaagttttttgaattggggaagaactttgccataagttcagggaagaaatttttgggattttgaactctaggtgacaaattataacatta 37791998  T
Q  295 gggttccaattttatatatttgaggaagaaaga 327  Q
    ||||||||| |||||||||||| ||||||||||    
T  37791997 gggttccaaatttatatatttggggaagaaaga 37791965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 328
Target Start/End: Complemental strand, 23905052 - 23904917
Alignment:
Q  194 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 293  Q
    ||||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| |||    
T  23905052 tattagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctagttgacaaattataacatt 23904953  T
Q  294 agggttccaattttatatattt-gaggaagaaagag 328  Q
    |||||||||| ||||||||||| | |||||||||||    
T  23904952 agggttccaaatttatatatttgggggaagaaagag 23904917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 6605032 - 6605162
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||| ||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  6605032 attagggttttaagttttttgaattggggaaaaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtaacaaattataacatta 6605131  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    ||||||||| |||||||||||| ||||||||    
T  6605132 gggttccaaatttatatatttggggaagaaa 6605162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 329
Target Start/End: Original strand, 13169302 - 13169435
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  13169302 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 13169401  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||| ||||| |||||||||||| ||||||||||||    
T  13169402 ggg-tccaaatttatatatttggggaagaaagagc 13169435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 39858133 - 39857999
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||| ||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  39858133 attagggttttaagttttttgaattggtgaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 39858034  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||| | |||||||||||| ||||||||||||    
T  39858033 gggttccgaatttatatatttggggaagaaagagc 39857999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 47384738 - 47384608
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||| |||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  47384738 attagggttttaagttttttgaattggggaagaactttgacatcaattcatggaagacattttggggattttgaactctaggtgacaaattataacatta 47384639  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    ||||||||| |||||||| ||| ||||||||    
T  47384638 gggttccaaatttatataattggggaagaaa 47384608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 48705396 - 48705499
Alignment:
Q  81 actttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcgga 180  Q
    ||||| ||||||  |||||||| ||  ||||||||  |||||||| ||||||| ||||||| ||||||||||||||||| ||| |||| ||  |||||||    
T  48705396 actttgataattctttttgcccatatgcccacccc--atcatttcggattcaatttgaacagttttgcttgaagaaattatggagattctggttttcgga 48705493  T
Q  181 ttcaat 186  Q
    ||||||    
T  48705494 ttcaat 48705499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 40785079 - 40785164
Alignment:
Q  39 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 124  Q
    ||||||||||||||||||| |||||||| ||||  ||||| |||||||||||||| ||||  || ||  |||||||| ||||||||    
T  40785079 tctcacatcaccattaaacttggagcttgaagaagaagctcgactttcataattgtttttttccatattcccaccccccatcattt 40785164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 48851001 - 48850929
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttg 267  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||| || ||||||||||||||||||||    
T  48851001 attagggttttaagttttttgaattggggaagaactttggcatcaattaatggaagaaattttgggaattttg 48850929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 12904046 - 12904101
Alignment:
Q  273 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||  ||||||||||    
T  12904046 tagattacagattgtaaaattagggttcaaattttatagatttggagaagaaagag 12904101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 328
Target Start/End: Original strand, 48311427 - 48311543
Alignment:
Q  210 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 309  Q
    |||||||||||||||||||| ||  ||  ||||| |||||||||||||| | |||||| | | ||| | ||| ||| |||||||| ||||||||   |||    
T  48311427 tttttgaattggggaagaactttgtcatcaattaatgaaagaaattttgaggattttgaattctaggtgacaaattataaaattaaggttccaa--atat 48311524  T
Q  310 atatttgaggaagaaagag 328  Q
    ||||||| |||||||||||    
T  48311525 atatttggggaagaaagag 48311543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 3921096 - 3921007
Alignment:
Q  239 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||| || ||||||||||||| |||||| | | ||||||||| |||||| ||||| |||| |||||||||| ||| | ||||||||||||    
T  3921096 aattaatggaagaaattttggggattttgtactatagattacagattgtagaatta-ggtttcaattttatagattcggggaagaaagagc 3921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 225
Target Start/End: Original strand, 12903939 - 12904026
Alignment:
Q  138 aacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaa 225  Q
    |||||||||||||||||||||||||| || |||| ||||||| ||||||        |||||||||||| | |||| |||||||||||    
T  12903939 aacaattttgcttgaagaaattttggagactttggatttcgggttcaataaaaacaaattagggtttgacgtttttagaattggggaa 12904026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 38549975 - 38549845
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||| ||| ||| |||||||||||||||||||| ||   |  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  38549975 attaggattttaagttttttgaattggggaagaactttggtatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacatta 38549876  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    ||||||||| |||||||||||  ||||||||    
T  38549875 gggttccaaatttatatatttagggaagaaa 38549845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 328
Target Start/End: Original strand, 22155495 - 22155626
Alignment:
Q  196 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 295  Q
    ||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | ||| ||| ||| ||||     
T  22155495 ttagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaagtgacaaattataacattaa 22155594  T
Q  296 ggttccaattttatatatttgaggaagaaagag 328  Q
    |||||||| |||||||||||| |||||||||||    
T  22155595 ggttccaa-tttatatatttggggaagaaagag 22155626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 328
Target Start/End: Original strand, 22211410 - 22211541
Alignment:
Q  196 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 295  Q
    ||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | ||| ||| ||| ||||     
T  22211410 ttagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaagtgacaaattataacattaa 22211509  T
Q  296 ggttccaattttatatatttgaggaagaaagag 328  Q
    |||||||| |||||||||||| |||||||||||    
T  22211510 ggttccaa-tttatatatttggggaagaaagag 22211541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 327
Target Start/End: Complemental strand, 38472705 - 38472573
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||  ||| |||||| | | ||| | ||| ||| ||| ||||    
T  38472705 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaattcgggggattttgaactctaggtgacaaattataacatta 38472606  T
Q  295 gggttccaattttatatatttgaggaagaaaga 327  Q
     |||||||| |||||||||||| |||| |||||    
T  38472605 aggttccaaatttatatatttggggaataaaga 38472573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 328
Target Start/End: Complemental strand, 34775493 - 34775362
Alignment:
Q  197 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 296  Q
    |||||||| ||| ||| |||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||    
T  34775493 tagggttttaagttttctgaattggggaagaacattgacatcaattcatgtaagaaatttgggagattttgaactctaggtaacaaattataacattagg 34775394  T
Q  297 gttccaattttatatatttgaggaagaaagag 328  Q
    ||||||| |||||||||||  |||||||||||    
T  34775393 gttccaaatttatatatttagggaagaaagag 34775362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 8421921 - 8421867
Alignment:
Q  108 cccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttg 162  Q
    |||||||||||||||||||||||||| || ||   |||||||| |||||||||||    
T  8421921 cccacccctcatcatttcagattcaatttcaagcgttttgcttcaagaaattttg 8421867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 380
Target Start/End: Complemental strand, 34784289 - 34784243
Alignment:
Q  334 cattttctacaaatcaattaatttgatccttggaaattttggtcact 380  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  34784289 cattttctgcaaatcaatcaatttcgtccttggaaattttggtcact 34784243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 317
Target Start/End: Original strand, 27956933 - 27956988
Alignment:
Q  261 aattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 317  Q
    |||||||||||||||||| || |||||  |||||| ||||||| |||||||||||||    
T  27956933 aattttggagtgtagattgcagattgtgtaattagagttccaa-tttatatatttga 27956988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 48227707 - 48227743
Alignment:
Q  292 ttagggttccaattttatatatttgaggaagaaagag 328  Q
    |||||||||||| |||||||||||| |||||||||||    
T  48227707 ttagggttccaaatttatatatttggggaagaaagag 48227743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 2e-68; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 195 - 402
Target Start/End: Complemental strand, 11031828 - 11031621
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||    
T  11031828 attagggtttgaagttttttgaattagggaagaacgttaccactaattattggaagaaattttggggattttggagtgtagattatagattgtaaaatta 11031729  T
Q  295 gggttccaattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattgg 394  Q
    || ||||||||||||||||||| |||||||| |||||| |||||| | ||||||||| |||||  ||||||||||||||||||||| ||| ||| ||| |    
T  11031728 ggcttccaattttatatatttggggaagaaaaagcaaaacattttatgcaaatcaataaatttagtccttggaaattttggtcactatcggccaaattag 11031629  T
Q  395 tctctgct 402  Q
    ||||||||    
T  11031628 tctctgct 11031621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 40019745 - 40019448
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| ||    
T  40019745 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttag 40019646  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  40019645 attcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaaga 40019546  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  40019545 acgtgacccttaattattggaagaaaatttggagattttggggtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 40019448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 117 - 328
Target Start/End: Complemental strand, 25356834 - 25356622
Alignment:
Q  117 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttg 215  Q
    ||||||||| ||||||| || || | |||||||| |||||||||||| ||||||| ||||| ||||||||        | ||||||||||||| ||||||    
T  25356834 catcatttctgattcaatttcaatagttttgcttcaagaaattttggggattttggatttcagattcaataaaaaagaaattagggtttgaagttttttg 25356735  T
Q  216 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 315  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||  ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||    
T  25356734 aattggggaagaacgttaccacttattattggaagaaattttggtgattttggagtgtagattacatatagtataattagagttccagttttatatattt 25356635  T
Q  316 gaggaagaaagag 328  Q
    | |||||||||||    
T  25356634 ggggaagaaagag 25356622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 329
Target Start/End: Complemental strand, 33369362 - 33369050
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || ||||||||| |||||||||||||||||||  |||||||| |||||||||||  ||||||||||  | |||| | | ||  |||||  | ||    
T  33369362 ggacaccaacattcaagcgctctcacatcaccattaaatttggagcttgaagataaagctcaactttcataaccgttttttctcatattcccacgtccca 33369263  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta--ttagggtttgaagctttttga 216  Q
    ||||||||||||||| || || | |||||||| ||||| ||||||  ||||||  |||| ||||||||        |  || |||||||||| |||||||    
T  33369262 tcatttcagattcaatttcaatagttttgcttcaagaagttttgggaattttggctttcagattcaataagaaaaaaaattcgggtttgaagttttttga 33369163  T
Q  217 attggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 316  Q
    |||||||||||||   |||||| ||||||| ||||| ||||||  ||||||||||||||||| || ||| |  |||||||||||||||||||||||||||    
T  33369162 attggggaagaactggaccacttattattggaagaagttttggtgattttggagtgtagattgcagattatgtaattagggttccaattttatatatttg 33369063  T
Q  317 aggaagaaagagc 329  Q
     ||||||||||||    
T  33369062 gggaagaaagagc 33369050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 316
Target Start/End: Complemental strand, 28432807 - 28432520
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| || |||||||||  ||  |  |||||||| ||   ||||||| |||||||| ||    
T  28432807 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaaacttgactttggtagctctttttgcccatatgaccacccc-catcattttag 28432709  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || ||||  ||||||||||  |||||||  |||||||  |||| ||||||||        | || |||||| |  ||||||| ||||||||||    
T  28432708 attcaatttcaacagatttgcttgaatgaattttgtagattttggttttcagattcaattaaaaaaaaatacggtttgcaattttttgatttggggaaga 28432609  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 316  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28432608 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttg 28432520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 10269206 - 10269336
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||  | ||||||||||||    
T  10269206 attagcgtttgaagttttttgaattggggaagaacgttaccactaattattggaagaaattttggggattttggtgtgtagattgtagattgtaaaatta 10269305  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    || ||||||||||||||||||| | ||||||    
T  10269306 ggcttccaattttatatatttgggaaagaaa 10269336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 39 - 329
Target Start/End: Complemental strand, 461756 - 461467
Alignment:
Q  39 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 138  Q
    ||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || || | ||| ||  ||||| || ||||||||||||||||| || |    
T  461756 tctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgtttcttcccatattcccacaccccatcatttcagattcaatttca 461657  T
Q  139 acaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 238  Q
    | | ||||| || || ||||||||  |||||||| |||| ||||||||         ||||||||||||| ||||||||||||||||||||   ||||||    
T  461656 atagttttgtttcaa-aaattttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttttgaattggggaagaactggaccact 461558  T
Q  239 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
     ||||  | | ||||||||||  |||||||||||||||||  | |||||  |||||||||| |||||||||| | ||||||||||||||||    
T  461557 tattacaggaggaaattttggtgattttggagtgtagattggagattgtgtaattagggttacaattttatacaattgaggaagaaagagc 461467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 39 - 325
Target Start/End: Complemental strand, 33159236 - 33158951
Alignment:
Q  39 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 138  Q
    ||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| ||||||| || | |  ||||||||  |||||||||||||||| || |    
T  33159236 tctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgctttttccat-attcccaccccctatcatttcagattcaatttca 33159138  T
Q  139 acaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 238  Q
    | | |||||||| || ||| ||||  |||||||| |||| ||||||||         ||||||||||||| ||||||||||||||||||||   ||||||    
T  33159137 atagttttgcttcaaaaaaatttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttttgaattggggaagaaccgaaccact 33159038  T
Q  239 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
     |||| || | ||||||||||  ||||||||||||||||| || |||||  |||||||||| |||||||||| | ||| ||||||||    
T  33159037 tattactggaggaaattttggtgattttggagtgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaaa 33158951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 328
Target Start/End: Original strand, 9876053 - 9876361
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||| |||||||  |||||||||| |||||| | ||||| |||||||||||||||||  | |||| ||| ||  |||||||| ||    
T  9876053 ggacaccaacattcaagcattctcacaataccattaaacttggagcctgaagatgaagcttgactttcataacagttttttcccatattcccacccc-ca 9876151  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 218  Q
    ||||||||||||||| || || | |||||||| || ||||||||  |||||||  |||| |||||| |        |||||||||||||| |||||||||    
T  9876152 tcatttcagattcaatttcaatagttttgcttcaaaaaattttgaggattttggctttcagattcactacgaaaaaattagggtttgaagttttttgaat 9876251  T
Q  219 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 318  Q
    ||||| |||||   |||||| ||||||| | |||||||| |  ||| | ||||||||||| || |||||| |||||||||| |||||||||| | ||| |    
T  9876252 tggggcagaactggaccacttattattggaggaaatttttgtgattatagagtgtagattgcagattgtataattagggtttcaattttatacaattggg 9876351  T
Q  319 gaagaaagag 328  Q
    ||||||||||    
T  9876352 gaagaaagag 9876361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 9186302 - 9186432
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| ||||||||||||| |||||||||| |||||||||||| |||||||||  || |||||||||||||||||||| ||||||||||||    
T  9186302 attagggtttaaagttttttgaattgggtaagaacgttatcactaattattggaagaaatttatgggattttggagtgtagattacagattgtaaaatta 9186401  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    ||||| |||||||| ||||||| ||||||||    
T  9186402 gggtttcaattttaaatatttggggaagaaa 9186432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 30 - 328
Target Start/End: Complemental strand, 38881992 - 38881691
Alignment:
Q  30 ttcaagcactctca--catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacc-cctcatcatttca 126  Q
    ||||||||||||||  ||||||| |||||| |||||||| ||||| ||||| |||||||||||||| |||| ||| ||  | |||| || ||||||||||    
T  38881992 ttcaagcactctcatacatcaccgttaaacttggagcttgaagatgaagctcgactttcataattgttttttcccatattctcacctccccatcatttca 38881893  T
Q  127 gattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaag 226  Q
    ||||||| || || | |||||||| |||||||||||  |||||||  |||  || | |          |||||||||| ||| |||||||||||||||||    
T  38881892 gattcaatttcaatagttttgcttcaagaaattttgaggattttggcttttagaataagaaaaaaaaaattagggtttcaagttttttgaattggggaag 38881793  T
Q  227 aacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaag 326  Q
    |||   |||||| ||||||| ||||||||| ||   |||||||||||| ||| ||||||||  ||||| ||||||||||||||||||||| |||||||||    
T  38881792 aactggaccacttattattggaagaaatttgggtggttttggagtgtacattgcatattgtgtaattaaggttccaattttatatatttggggaagaaag 38881693  T
Q  327 ag 328  Q
    ||    
T  38881692 ag 38881691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 10268223 - 10268093
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||| | |||  |||||||||||| ||||| ||||||||||| ||||||||| ||| |||||||||||||||||| | |||| |||||||    
T  10268223 attagggtttgaagttatttacattggggaagaatgttactactaattattggaagaaatttgggggattttggagtgtagattatagattgaaaaatta 10268124  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    ||||||||||| |||||||||| ||||||||    
T  10268123 gggttccaattctatatatttggggaagaaa 10268093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 95 - 325
Target Start/End: Original strand, 44620244 - 44620472
Alignment:
Q  95 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 193  Q
    |||||||  |||||||||||| ||||||||||||||||| |  |||| ||||| |||||| |||||||| ||||||   |||| | |||||||           
T  44620244 ttttgccgatacacccacccc-catcatttcagattcaattacaacagttttgtttgaaggaattttggagatttttttattttgaattcaatcaaaaaa 44620342  T
Q  194 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 293  Q
     |||||||||||| | | ||| ||||||| |||||| |||||||||||||||| ||||| ||||| |||||||||||||| ||||| | |||||||||||    
T  44620343 -attagggtttgaggttatttcaattggg-aagaacattaccactaattattggaagaatttttgtgaattttggagtgtggattaaagattgtaaaatt 44620440  T
Q  294 agggttccaattttatatatttgaggaagaaa 325  Q
    |||||| |||||||||| ||||| ||||||||    
T  44620441 agggtttcaattttatacatttggggaagaaa 44620472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 44 - 329
Target Start/End: Original strand, 1321829 - 1322115
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  1321829 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccatattcccaccccccttcatttcagattcaatttcaatagt 1321928  T
Q  144 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaatt 242  Q
    ||||||| |||||||||||  |||||||  ||||  |||||||        | ||||||||| ||| ||||||||||||||||||||   |||||| |||    
T  1321929 tttgcttcaagaaattttgtggattttggctttcatattcaatacgaaaaaaattagggtttcaagttttttgaattggggaagaactgaaccacttatt 1322028  T
Q  243 attgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    |||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  1322029 attggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttccaattttatacaattggggaagacagagc 1322115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 197 - 329
Target Start/End: Complemental strand, 10770768 - 10770636
Alignment:
Q  197 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 296  Q
    |||||||||||| |||| |||||| |||| ||||||  || |||||| | |||||||||||||| |||||||||||  ||||||| ||||||||||||||    
T  10770768 tagggtttgaagtttttagaattgaggaaaaacgttgtcattaattaattaaagaaattttggggattttggagtgcggattacagattgtaaaattagg 10770669  T
Q  297 gttccaattttatatatttgaggaagaaagagc 329  Q
    | |||||||||||| ||||| ||||||||||||    
T  10770668 gctccaattttatagatttggggaagaaagagc 10770636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 25373335 - 25373440
Alignment:
Q  223 gaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaag 322  Q
    |||||| ||||| ||| ||||||| ||||||||||||  ||||||||||||||||||||||| | | ||| ||||||||||||| |||||||||||||||    
T  25373335 gaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacatatagcacaatcagggttccaatttcatatatttgaggaag 25373434  T
Q  323 aaagag 328  Q
    ||||||    
T  25373435 aaagag 25373440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 25705652 - 25705571
Alignment:
Q  248 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  25705652 aagaaattttggtgattttggagtgtagattacatatagtataattagggttccaattttatatatttggggaagaaagagc 25705571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 74 - 329
Target Start/End: Complemental strand, 42895317 - 42895061
Alignment:
Q  74 aagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaa 173  Q
    ||||| ||||||||| | || |||| ||| ||  |||||||| ||||||||||||||||| || || | |||||||| |||||||||||  |||||||      
T  42895317 aagctcgactttcatgactgttttttcccatattcccaccccccatcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattttggc 42895218  T
Q  174 tttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtg 272  Q
    ||||  |||||||        | ||||||||||||| ||||||||||||||||||||   |||| | || |||| |||| |||||||  ||||| |||||    
T  42895217 tttcaaattcaatacgaaaaaaattagggtttgaagttttttgaattggggaagaactggaccatttataattggaagatattttggtgattttagagtg 42895118  T
Q  273 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    || ||| || |||||  ||||||||||||||| ||||| | ||| ||||||||||||    
T  42895117 taaattgcagattgtgtaattagggttccaatgttatacaattggggaagaaagagc 42895061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 15684178 - 15684048
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||| ||||||  |||| ||||||||||||||||||  ||  ||||| || |||||||||| ||||||||| | | ||||||||| |||||||||||     
T  15684178 attaggttttgaaatttttagaattggggaagaacgttgtcatcaattaatggaagaaatttttggaattttgaactctagattacagattgtaaaattg 15684079  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    |||||||||||||||| ||||| ||||||||    
T  15684078 gggttccaattttatagatttggggaagaaa 15684048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 222 - 328
Target Start/End: Original strand, 25402504 - 25402610
Alignment:
Q  222 ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaa 321  Q
    ||||||| ||||| ||| ||||||| ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||| ||||    
T  25402504 ggaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacagatagtacaatcagggtttcaattttatatatttggggaa 25402603  T
Q  322 gaaagag 328  Q
    |||||||    
T  25402604 gaaagag 25402610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 222 - 328
Target Start/End: Original strand, 25707013 - 25707119
Alignment:
Q  222 ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaa 321  Q
    ||||||| ||||| ||| ||||||| ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| |||||||||||||||| ||||    
T  25707013 ggaagaatgttactacttattattggaagaaattttggttattttggagtgtagattacagatagtacaatcagggtttcaattttatatatttggggaa 25707112  T
Q  322 gaaagag 328  Q
    |||||||    
T  25707113 gaaagag 25707119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 300
Target Start/End: Complemental strand, 12515499 - 12515395
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||| ||||||||| |||||||||||||| | |||||||  ||| ||||||||||| |||||||||||||||||| | ||||||||||||    
T  12515499 attagggtttgaagttttttgaatcggggaagaacgttatcgctaattagggaa-gaaattttggggattttggagtgtagattaaagattgtaaaatta 12515401  T
Q  295 gggttc 300  Q
     |||||    
T  12515400 cggttc 12515395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 210 - 329
Target Start/End: Complemental strand, 11719865 - 11719746
Alignment:
Q  210 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 309  Q
    |||||||||||||||||||||||  ||  ||||| || ||||||||||||| |||||||| | ||| | | | ||||||||||| |||||||||||||||    
T  11719865 tttttgaattggggaagaacgttgtcatcaattaatggaagaaattttggggattttggactctaggtgataaattgtaaaattggggttccaattttat 11719766  T
Q  310 atatttgaggaagaaagagc 329  Q
    | ||||| ||||||||||||    
T  11719765 agatttggggaagaaagagc 11719746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 25370865 - 25370798
Alignment:
Q  262 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  25370865 attttggagtgtagattacatatagtataattagggttccaattttatatatttggggaagaaagagc 25370798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 17807446 - 17807313
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||| ||||||| ||||||||||||||||||| |||  ||  ||||| || ||||| ||||||| |||||| | | ||| | ||| ||| ||||||||    
T  17807446 attaggttttgaagttttttgaattggggaagaatgttgtcatcaattaatggaagaatttttggggattttgaactctaggtgacaaattataaaatta 17807347  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| |||||||||||| |||||||||||    
T  17807346 gggttccaaatttatatatttgtggaagaaagag 17807313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 11790496 - 11790627
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||| ||||||| |||| ||||| |||||||| |||  ||  ||||| || ||||||||||||| |||||||| | ||||| ||| |||||||||| |    
T  11790496 attaggttttgaagtttttagaatttgggaagaaggttgtcatcaattaatggaagaaattttggggattttggactatagataacaaattgtaaaatca 11790595  T
Q  295 gggttccaattttatatatttgaggaagaaag 326  Q
     ||||||| ||||||| |||||||||||||||    
T  11790596 aggttccatttttatagatttgaggaagaaag 11790627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 33748935 - 33748793
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||||||||||| ||| ||||||| |||||||| ||||| || ||||||||||||||  | ||||  || ||  |||||||| ||    
T  33748935 ggacaccaacattcaagcactctcacaacactattaaacttggagcttgaagatgaaacttgactttcataaccg-ttttttccatattcccaccccaca 33748837  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttg 162  Q
    ||||||||||||||| || || | |||||||| |||||||||||    
T  33748836 tcatttcagattcaatttcaatagttttgcttcaagaaattttg 33748793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 195 - 329
Target Start/End: Original strand, 31823142 - 31823276
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||| |||||||||||||| |||||   |||||||||||||  | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  31823142 attagggtttgaagttttttgaattggggcagaactgaaccactaattatttgaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 31823241  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    |||||||||||||||| | ||| ||||||||||||    
T  31823242 gggttccaattttatacaattggggaagaaagagc 31823276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 195 - 329
Target Start/End: Original strand, 32823938 - 32824072
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||| |||||||||||||||| |||   |||||| ||||||| | ||||||| ||  |||||  |||||||||| || |||||  |||||    
T  32823938 attagggtttgaagttttttgaattggggaaaaactgaaccacttattattggaggaaatttaggcgattttatagtgtagattgcagattgtgtaatta 32824037  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    |||||||||||||| | | ||| ||||||||||||    
T  32824038 gggttccaattttaaacaattggggaagaaagagc 32824072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 305 - 402
Target Start/End: Original strand, 9186447 - 9186544
Alignment:
Q  305 tttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattggtctctgct 402  Q
    |||||||||||| ||||||||||||||  |||||||| ||||||||| |||||  || |||||||||||||||||| ||| ||| ||| |||||||||    
T  9186447 tttatatatttggggaagaaagagcaagtcattttctgcaaatcaatcaatttagtcattggaaattttggtcactatcggccaaattagtctctgct 9186544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 186
Target Start/End: Original strand, 25371636 - 25371781
Alignment:
Q  41 tcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaac 140  Q
    ||||||||||||||||| |||||||| ||||| ||||| ||| ||||||| || |||| ||| ||  |||||||||||||||||| ||||||| || ||     
T  25371636 tcacatcaccattaaacttggagcttgaagatgaagctcgacattcataactgttttttcccatatgcccacccctcatcatttcggattcaatttcaat 25371735  T
Q  141 aattttgcttgaagaaattttggtgattttgaatttcggattcaat 186  Q
    | |||||||  || |||||||   ||||||| ||||| ||||||||    
T  25371736 agttttgctgcaataaattttttggattttggatttcagattcaat 25371781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 210 - 329
Target Start/End: Complemental strand, 24527303 - 24527184
Alignment:
Q  210 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 309  Q
    ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||||||||||||    
T  24527303 tttttgaattggggaagaactggaccacttattattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttccaattttat 24527204  T
Q  310 atatttgaggaagaaagagc 329  Q
    | | ||| |||||| |||||    
T  24527203 acaattggggaagatagagc 24527184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 211 - 329
Target Start/End: Complemental strand, 37525267 - 37525149
Alignment:
Q  211 ttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 310  Q
    |||||||||||||||||||   |||||| |||| || | ||||||||||  |||||||||||||||||  | |||||  |||||||||| ||||||||||    
T  37525267 ttttgaattggggaagaactgaaccacttattagtggaggaaattttggtgattttggagtgtagattgaagattgtgcaattagggttacaattttata 37525168  T
Q  311 tatttgaggaagaaagagc 329  Q
     | ||| |||| |||||||    
T  37525167 caattggggaataaagagc 37525149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 41041166 - 41041032
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| | |||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  41041166 attagggttttaagttatttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 41041067  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| |||||||||||| ||||||||||||    
T  41041066 gggttccaaatttatatatttggggaagaaagagc 41041032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 13484964 - 13484831
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  13484964 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 13484865  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
     |||||||| |||||||||||| |||||||||||    
T  13484864 aggttccaaatttatatatttggggaagaaagag 13484831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 37525418 - 37525333
Alignment:
Q  39 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcattt 124  Q
    ||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||||||||    
T  37525418 tctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccaccccccatcattt 37525333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 8655640 - 8655752
Alignment:
Q  117 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 216  Q
    ||||||||||||||||| || || | |||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| |||||||    
T  8655640 catcatttcagattcaatttcaatagttttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaattagggtttcaagttttttga 8655739  T
Q  217 attggggaagaac 229  Q
    |||||||||||||    
T  8655740 attggggaagaac 8655752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 41824394 - 41824261
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||  | ||| ||| ||| ||||    
T  41824394 attagggttttaagttttttgaattggggaagaactttgacatcaattcatggaagaaattttggggattttgaactctacgtgacaaattataacatta 41824295  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||| ||| | |||||||||| |||||||||||    
T  41824294 gggtttcaaatatatatatttggggaagaaagag 41824261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 323
Target Start/End: Complemental strand, 31199909 - 31199781
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| || |||||||| ||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  31199909 attagggttttaagtttgttgaattgaggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 31199810  T
Q  295 gggttccaattttatatatttgaggaaga 323  Q
    |||||||||||||||| | ||| ||||||    
T  31199809 gggttccaattttatacaattggggaaga 31199781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 33748759 - 33748644
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||  |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  33748759 attagggtttgaatttttttgaattggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 33748660  T
Q  295 gggttccaattttata 310  Q
     |||||||||||||||    
T  33748659 aggttccaattttata 33748644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 22273535 - 22273668
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||| ||| ||| || ||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||    
T  22273535 attaggattttaagtttcttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtgacaaattataacatta 22273634  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| |||||||||||| |||||||||||    
T  22273635 gggttccaaatttatatatttggggaagaaagag 22273668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 402
Target Start/End: Complemental strand, 10268086 - 10267998
Alignment:
Q  314 ttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattggtctctgct 402  Q
    ||||||||||||||||||| |||||||   |||||||| |||||  || ||||||||| |||||||| ||  ||| ||| |||||||||    
T  10268086 ttgaggaagaaagagcaaaacattttcagtaaatcaatcaatttagtcattggaaattatggtcactatcagccaaattagtctctgct 10267998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 327
Target Start/End: Original strand, 29693963 - 29694095
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| ||||| |||||| ||||||| ||  ||  ||||  || ||||||| ||| | |||||| | | ||| | ||| ||| ||| ||||    
T  29693963 attagggttttaagttttttaaattggagaagaactttgtcatcaattcatggaagaaatcttgcggattttgaactctaggtgacaaattataacatta 29694062  T
Q  295 gggttccaattttatatatttgaggaagaaaga 327  Q
    ||||||||| |||||||||||| ||||||||||    
T  29694063 gggttccaaatttatatatttggggaagaaaga 29694095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 32823816 - 32823863
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataat 91  Q
    |||||||||||||| || ||||| ||||||||||| ||||||||||||    
T  32823816 catcaccattaaacttgaagcttgaagataaagctcgactttcataat 32823863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 11720047 - 11719994
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagat 72  Q
    ||||| || |||||||| ||||||||||||||||||| ||| |||||| |||||    
T  11720047 ggacaccaacattcaagtactctcacatcaccattaagcatagagcttgaagat 11719994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 31822975 - 31823028
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagat 72  Q
    ||||| || |||||||||||||||||| ||||||||||| ||||| || |||||    
T  31822975 ggacaccaacattcaagcactctcacaacaccattaaacttggagtttgaagat 31823028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 3e-64; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 11022122 - 11021825
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||| || ||   |||||||||||||||| ||    
T  11022122 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgtccatatgaccacccctcatcattttag 11022023  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||| |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  11022022 attcaatttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaaga 11021923  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  11021922 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 11021825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 28 - 325
Target Start/End: Original strand, 28247677 - 28247974
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| ||    
T  28247677 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttag 28247776  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  28247777 attcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaaga 28247876  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  28247877 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 28247974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 363354 - 363485
Alignment:
Q  195 attagggtttgaagctttt-tgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 293  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||    
T  363354 attagggtttgaagtttttttgaattggagaagaacgttaccactaattattggaagaaattttgaggattttggagtgtagattacatattgtaaaatt 363453  T
Q  294 agggttccaattttatatatttgaggaagaaa 325  Q
    ||||||||||||||||||||||| ||||||||    
T  363454 agggttccaattttatatatttggggaagaaa 363485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 36 - 325
Target Start/End: Complemental strand, 11313402 - 11313127
Alignment:
Q  36 cactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaat 135  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| || | |  |||||||| ||  |||||||| ||||| ||   |||||| |    
T  11313402 cactctcacatcaccattaaacatggagcttgaagataaagcttgactttgatgactctttttgcccatatgcccacccc-catcagtttctattcaatt 11313304  T
Q  136 tgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttacc 235  Q
    |||||| |||||||||||||||||||||  ||| |   |||||||||||||        || |||||||| || ||||| ||||||||||||||||||||    
T  11313303 tgaacagttttgcttgaagaaattttgggaattctagttttcggattcaataaaaaaaaatgagggtttggagtttttttaattggggaagaacgttacc 11313204  T
Q  236 actaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||             |||| |||| ||||||||||||| |||| | |||||||||||||||||| ||||||||||||||| ||||||||    
T  11313203 act-------------aattgtggggattttggagtgtacattaaagattgtaaaattagggttctaattttatatatttggggaagaaa 11313127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 28 - 325
Target Start/End: Original strand, 38149538 - 38149836
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    |||| ||||| |||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| ||    
T  38149538 catttaagcattctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttag 38149637  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntatt-agggtttgaagctttttgaattggggaag 226  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        | | ||| |||| |  ||||||| ||||||||     
T  38149638 attcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaaatcaggatttgcaattttttgatttggggaat 38149737  T
Q  227 aacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    ||||| |||  ||||||||| |||||| |||||  ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||    
T  38149738 aacgtgacccttaattattggaagaaaatttggagattttagagtgtagattacacattgtaaaattagggttccaattttatatatttgggaaagaaa 38149836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 7744932 - 7745062
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| | ||||||||||||    
T  7744932 attagggtttgaggttatttcaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaaagattgtaaaatta 7745031  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    ||||| |||||||||| ||||| | ||||||    
T  7745032 gggtttcaattttatacatttgggaaagaaa 7745062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 117 - 327
Target Start/End: Complemental strand, 10715607 - 10715400
Alignment:
Q  117 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 216  Q
    |||||||||  |||||| ||||||| ||||||||||||||||||||| |||| |   ||| |||||||||        |||||||||||||| |||||||    
T  10715607 catcatttcgaattcaatttgaacagttttgcttgaagaaattttggggattctagtttttggattcaataaaaaa--attagggtttgaagttttttga 10715510  T
Q  217 attggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 316  Q
    |||||| || ||||||||  |||||||| | ||| |||||||||||||||  || |||||||| | ||||||||||||||||||||||||||||||||||    
T  10715509 attggg-aacaacgttactgctaattatcggaaggaattttgggaattttttagggtagattaaagattgtaaaattagggttccaattttatatatttg 10715411  T
Q  317 aggaagaaaga 327  Q
     |||| |||||    
T  10715410 gggaaaaaaga 10715400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 17948601 - 17948734
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||| | | ||| |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||||| | ||||||||||||    
T  17948601 attagggtttgaggttatttcaattggggaagaacgttaccaccaattattggaagaatttttgggaattttggagtgtggattaaagattgtaaaatta 17948700  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||| |||||||||| ||||| | |||||||||    
T  17948701 gggtttcaattttatacatttgggaaagaaagag 17948734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 28 - 329
Target Start/End: Original strand, 37418266 - 37418569
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgc-ccttacacccacccctcatcatttca 126  Q
    |||||||||||||||||| ||||||||||| || ||||  ||||| || || ||||||||||| || ||||   || ||  |||||||| ||||||||||    
T  37418266 cattcaagcactctcacaacaccattaaacttgaagctcgaagatgaaactcgactttcataactgttttttttccatattcccaccccccatcatttca 37418365  T
Q  127 gattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaa 225  Q
    ||||||| || || | |||||||| |||||| ||||  |||||||  ||||  |||||||        | ||||||||||||| |||||||||||| |||    
T  37418366 gattcaatttcaatagttttgcttcaagaaactttgaggattttggctttcaaattcaatacgaaaaaaattagggtttgaagttttttgaattggcgaa 37418465  T
Q  226 gaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    ||||   |||| | || |||| | || |||||||  ||||| ||||||| ||| || |||||  ||||||||||||||| ||||| | ||| ||||||||    
T  37418466 gaactggaccatttataattggaggatattttggtgattttagagtgtaaattgcagattgtgtaattagggttccaatgttatacaattggggaagaaa 37418565  T
Q  326 gagc 329  Q
    ||||    
T  37418566 gagc 37418569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 325
Target Start/End: Complemental strand, 2359516 - 2359394
Alignment:
Q  202 tttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcc 301  Q
    ||||||| |||| ||||||||||||||||||  ||  ||||| ||| ||||||||||||| ||||||| | ||||| ||| ||||||||||||||||| |    
T  2359516 tttgaagtttttagaattggggaagaacgttgtcatcaattaatgatagaaattttggga-ttttggactctagatgacaaattgtaaaattagggtttc 2359418  T
Q  302 aattttatatatttgaggaagaaa 325  Q
    ||||||||| ||||| ||||||||    
T  2359417 aattttatagatttggggaagaaa 2359394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 325
Target Start/End: Complemental strand, 35881 - 35575
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||||||||||| ||||||||||| |||||||| ||||| || ||| ||||||||||  | ||||  || ||  ||||| || ||    
T  35881 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaaacttaactttcataaccg-ttttttccatattcccactccaca 35783  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 217  Q
    ||||||||||||||| || || | |||||||| |||||||||||  |||| ||  |||| |||||| |         |||||||||||||| ||||||||    
T  35782 tcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattctggctttcagattcactacgaaaaaaattagggtttgaagttttttgaa 35683  T
Q  218 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 317  Q
    |||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||| ||| || |||||  ||||| ||||| ||||||||| | |||     
T  35682 ttggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtatattgcagattgtgtaattaaggttcgaattttatacaattgg 35583  T
Q  318 ggaagaaa 325  Q
    ||||||||    
T  35582 ggaagaaa 35575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 47 - 328
Target Start/End: Original strand, 42880329 - 42880610
Alignment:
Q  47 caccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatttt 146  Q
    ||||||||||| | ||||| |||||| ||||| ||||||||||| || |||| ||| ||  |||| ||| ||| ||||| ||||||| || || | ||||    
T  42880329 caccattaaacttagagctcaaagatgaagctcgactttcataactgttttttcccatattcccaacccccatgatttctgattcaatttcaatagtttt 42880428  T
Q  147 gcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattg 246  Q
    |||| |||||||||||  |||||||  ||||  ||| |||        |||||||||||||| ||||| ||||||||||||||   |||| | || ||||    
T  42880429 gcttcaagaaattttgaggattttggctttcaaatttaatacgaaaaaattagggtttgaagttttttaaattggggaagaactggaccatttataattg 42880528  T
Q  247 aaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 328  Q
     | || |||||||  ||||| ||||||| ||| || |||||  |||||||||| |||| ||||| | ||| |||||||||||    
T  42880529 gaggatattttggtgattttagagtgtaaattgcagattgtgtaattagggtttcaatgttatacaattggggaagaaagag 42880610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 34400762 - 34400628
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | | | | ||| ||| ||| ||||    
T  34400762 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctgggtgacaaattataacatta 34400663  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| |||||||||||| ||||||||||||    
T  34400662 gggttccaaatttatatatttggggaagaaagagc 34400628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 42518011 - 42517877
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||||| || ||| |||||| | | ||| | ||| ||| ||| ||||    
T  42518011 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaaattgggggattttgaactctaggtgacaaattataacatta 42517912  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| |||||||||||| ||||||||||||    
T  42517911 gggttccaaatttatatatttggggaagaaagagc 42517877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 323
Target Start/End: Original strand, 15373554 - 15373683
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgt-taccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 293  Q
    |||||||||| ||| |||||||||||||||||||| |  |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  ||||    
T  15373554 attagggttttaagttttttgaattggggaagaacttggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatt 15373653  T
Q  294 agggttccaattttatatatttgaggaaga 323  Q
    ||||||||||||||||| | ||| ||||||    
T  15373654 agggttccaattttatacaattggggaaga 15373683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 228
Target Start/End: Complemental strand, 40150825 - 40150664
Alignment:
Q  68 aagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttg-cttgaagaaattttggtga 166  Q
    ||||| || ||||||||| | ||||| |||||||| |||  ||||| | |||||||| ||||||||  ||||||||||||  ||||||||||||||  ||    
T  40150825 aagatgaaacttgactttgagaattgtttttgcccatacggccaccacccatcattttagattcaatctgaacaattttgatttgaagaaattttgaaga 40150726  T
Q  167 ttttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaa 228  Q
    ||||| |||| |||||||||        | |||||||||||| |||| |||| |||||||||    
T  40150725 ttttggattttggattcaatgaaaacaaaatagggtttgaagtttttagaataggggaagaa 40150664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 117 - 329
Target Start/End: Original strand, 40152135 - 40152346
Alignment:
Q  117 catcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttga 216  Q
    ||||||||  |||||||  |||||||||||| |||||||||||||   ||||||| ||||||||||||||        |||||||||| ||| |||| ||    
T  40152135 catcattttggattcaatctgaacaattttggttgaagaaattttcaggattttggatttcggattcaatcaaatcaaattagggttttaagtttttaga 40152234  T
Q  217 attggggaagaa--cgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 314  Q
    ||||||||||||   |||     |||||| || |||||||| |||  ||||||||  |||||| | | |||| |||||| ||||| |||||||||| |||    
T  40152235 attggggaagaaatggtt---gttaattaatggaagaaattgtggagattttggaccgtagatgagagattgaaaaatttgggtttcaattttatagatt 40152331  T
Q  315 tgaggaagaaagagc 329  Q
    || | ||||||||||    
T  40152332 tgggaaagaaagagc 40152346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 328
Target Start/End: Original strand, 17697776 - 17697903
Alignment:
Q  196 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattag 295  Q
    ||||||||| ||| ||||||||||||||||||||    |||  | |||| ||| ||||||||||| |||||| | | ||| | ||| ||| ||| |||||    
T  17697776 ttagggttttaagttttttgaattggggaagaac----ccatcatttatggaa-gaaattttggggattttgaactctaggtgacaaattataacattag 17697870  T
Q  296 ggttccaattttatatatttgaggaagaaagag 328  Q
    |||||||| |||||||||||| |||||||||||    
T  17697871 ggttccaaatttatatatttggggaagaaagag 17697903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 19907170 - 19907036
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||| ||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  19907170 attagggttttaagttttttgaattggtgaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 19907071  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||| | |||||||||||| ||||||||||||    
T  19907070 gggttccgaatttatatatttggggaagaaagagc 19907036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 42002990 - 42003108
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||| ||  ||||||||  |||||||||||||  | || || | |    
T  42002990 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcccatattcccaccccctatcatttcagattttatttcaatagt 42003089  T
Q  144 tttgcttgaagaaattttg 162  Q
    ||||||| |||||||||||    
T  42003090 tttgcttcaagaaattttg 42003108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 323
Target Start/End: Original strand, 41708097 - 41708225
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| ||||||||||| ||||||||   |||||| ||||| | | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  41708097 attagggttttaagttttttgaattgaggaagaactggaccacttattatgggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 41708196  T
Q  295 gggttccaattttatatatttgaggaaga 323  Q
    |||||||||||||||| | ||| ||||||    
T  41708197 gggttccaattttatacaattggggaaga 41708225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 10715682 - 10715644
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagctt 66  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  10715682 cattcaagcactctcacagcaccattaaacatggagctt 10715644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 309
Target Start/End: Complemental strand, 26581430 - 26581316
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||| ||||||| |||||||||||||||| | ||||  ||  ||||| || |||||||||||||||||||| | | ||| | ||| ||| ||||||||    
T  26581430 attaggttttgaagttttttgaattggggaacagcgttgtcatcaattaatggaagaaattttgggaattttgaactctaggtgacaaattataaaatta 26581331  T
Q  295 gggttccaattttat 309  Q
    || ||| ||| ||||    
T  26581330 ggattctaatcttat 26581316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 16377163 - 16377082
Alignment:
Q  248 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| | | |||||| | ||||| | ||| ||| ||| ||||||||||||| |||||||||||| ||||||||||||    
T  16377163 aagaaatttagaggattttgaactgtaggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagc 16377082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 4047703 - 4047758
Alignment:
Q  273 tagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 328  Q
    ||||| ||| ||| ||||||||||||| |||||||||| ||||| |||||||||||    
T  4047703 tagatgacaaattataaaattagggtttcaattttatagatttggggaagaaagag 4047758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 363509 - 363547
Alignment:
Q  314 ttgaggaagaaagagcaaagcattttctacaaatcaatt 352  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  363509 ttgaggaagaaagagcaaaacattttctgcaaatcaatt 363547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 161813 - 161854
Alignment:
Q  287 taaaattagggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||||||||||| ||| |||||||| |||||||||||    
T  161813 taaaattagggttccaaatttttatatttggggaagaaagag 161854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 2359542 - 2359587
Alignment:
Q  283 attgtaaaattagggttccaattttatatatttgaggaagaaagag 328  Q
    ||||| |||||||||||||||||| ||| ||||| |||||||||||    
T  2359542 attgtcaaattagggttccaatttaatagatttggggaagaaagag 2359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 14387837 - 14387765
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttg 267  Q
    |||||||||  ||| |||||||||||||||||||  ||  ||  |||||||| ||||||||||||| ||||||    
T  14387837 attagggttctaagttttttgaattggggaagaaaattgacatcaattattggaagaaattttggggattttg 14387765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 323
Target Start/End: Original strand, 31474719 - 31474847
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| | | ||||||||||||| |||| | ||  ||||||||  || ||||||| ||| | |||||| | |  || | ||| ||| ||| ||||    
T  31474719 attagggttttaggttttttgaattgggaaagatctttgtcactaattcatggaagaaatcttgaggattttgaactcaaggtcacaaattataatatta 31474818  T
Q  295 gggttccaattttatatatttgaggaaga 323  Q
    ||||||||| |||||||||||| ||||||    
T  31474819 gggttccaaatttatatatttggggaaga 31474847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 3e-64; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 28 - 325
Target Start/End: Original strand, 5784369 - 5784666
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||| || ||   |||||||||||||||| ||    
T  5784369 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgtccatatgaccacccctcatcattttag 5784468  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||| |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  5784469 attcaatttcaacagttttgcttgaatgaattttgcagattttgattttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaaga 5784568  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  5784569 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 5784666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 19 - 328
Target Start/End: Complemental strand, 42558546 - 42558248
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||  | ||| |||| || |||||||| ||| |||||| | ||    
T  42558546 ggacaccaacattcaagcactctcacatcaccattaaacatggagcttgaagatgaagctcaaatttgataactgattttgcccatacgcccaccaccca 42558447  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 218  Q
    |||||||||||||||  ||||||||| |||||||||||||||||  ||||||| |||| |||||||||        |||||||||||||| |||| ||||    
T  42558446 tcatttcagattcaatctgaacaattatgcttgaagaaattttgcggattttggattttggattcaatcaaaaga-attagggtttgaagtttttagaat 42558348  T
Q  219 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 318  Q
    |||| ||||||||   || |||||| || ||||| ||||||  |          ||||| ||| ||||||||||||||||||||||||| || ||||| |    
T  42558347 tgggaaagaacgtcgtcattaattaatggaagaatttttggaga----------tagatgacagattgtaaaattagggttccaattttctagatttggg 42558258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 95 - 325
Target Start/End: Original strand, 51123115 - 51123342
Alignment:
Q  95 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnt 194  Q
    |||||||| |||||||||||| ||||||||||||||||| |  |||| ||||  |||||| |||||||| ||||||    ||||||||||||            
T  51123115 ttttgcccatacacccacccc-catcatttcagattcaattacaacagttttatttgaaggaattttggggattttttgattcggattcaatcaaaaa-- 51123211  T
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||| | | ||| |||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| |||||   ||||||||||||    
T  51123212 attagggtttgaggttatttcaattggggaagaacgttacctctaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatta 51123311  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    |||||||||||||||| ||||||||||||||    
T  51123312 gggttccaattttatacatttgaggaagaaa 51123342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 31 - 325
Target Start/End: Complemental strand, 11153130 - 11152837
Alignment:
Q  31 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 130  Q
    ||||||| |||||||||||||||||||||||||  | ||||| ||| |||||||| |||  |  |||||||| ||   ||||||| |||||||| |||||    
T  11153130 tcaagcattctcacatcaccattaaacatggaggatgaagatgaagtttgactttgatagctctttttgcccatatgaccacccc-catcattttagatt 11153032  T
Q  131 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 230  Q
    ||| || |||| |||||||||||  |||||||  ||||||   |||| ||||||||        ||||||||||| |  ||||||| ||||||||||||     
T  11153031 caatttcaacagttttgcttgaatgaattttgcagattttagttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaagaaca 11152932  T
Q  231 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    | |||  ||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||    
T  11152931 tgacccttaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatacatttggggaagaaa 11152837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 195 - 312
Target Start/End: Original strand, 25172701 - 25172818
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||| |||| | ||||||||||||    
T  25172701 attagggtttgaatttttttaaattggggaagaacgttaccactaattattggaagaaattttggagattttggagcgtacattaaagattgtaaaatta 25172800  T
Q  295 gggttccaattttatata 312  Q
    |||||| |||||||||||    
T  25172801 gggttctaattttatata 25172818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 44 - 329
Target Start/End: Complemental strand, 45379658 - 45379374
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    ||||||| |||||| |||||||||||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  45379658 catcaccgttaaacttggagcttaaagatgaagctcgactttcataacaattttttcccatattcccacccc-cttcatttcagattcaatttcaatagt 45379560  T
Q  144 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 243  Q
    ||||||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| ||| ||||||||||||||||   |||||| ||||    
T  45379559 tttgcttcaagaaattttgtggattttggctttcagattcaatacaaaaaaattagggtttcaagttttctgaattggggaagaactagaccacttatta 45379460  T
Q  244 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||| ||||||||| | ||| |||||| |||||    
T  45379459 ttggaggaaatttaggtgattttagaatgtagattgcaaattgtgtaattagggttctaattttatacaattggggaagacagagc 45379374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 329
Target Start/End: Original strand, 31803190 - 31803500
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||||||||||| ||| ||||||| |||||||| ||||| || ||||||||||||||  | |||| || | |  |||||||| ||    
T  31803190 ggacaccaacattcaagcactctcacaacactattaaacttggagcttgaagatgaaacttgactttcataaccgttttttccat-attcccaccccaca 31803288  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaa 217  Q
    ||||||||||||||| || || | |||||||| |||||||||||  |||| ||  |||| |||||| |        | ||||||||||||| ||||||||    
T  31803289 tcatttcagattcaatttcaatagttttgcttcaagaaattttgaggattctggctttcagattcactacgaaaaaaattagggtttgaagttttttgaa 31803388  T
Q  218 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 317  Q
    |||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||  |||||||||||||| | |||     
T  31803389 ttggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaacgttccaattttatacaattgg 31803488  T
Q  318 ggaagaaagagc 329  Q
    ||||||||||||    
T  31803489 ggaagaaagagc 31803500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 329
Target Start/End: Complemental strand, 46637365 - 46637056
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | ||||  || ||  |||||||| ||    
T  46637365 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccg-ttttttccatattcccaccccaca 46637267  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 217  Q
    |||||| |||||||| || || | |||||||| |||||||||||  |||| ||  ||||  ||||| |         |||||||||||||| ||||||||    
T  46637266 tcattttagattcaatttcaatagttttgcttcaagaaattttgaggattctggctttcaaattcactacgaaaaaaattagggtttgaagttttttgaa 46637167  T
Q  218 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 317  Q
    |||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  ||||| ||||||||||||||| | |||     
T  46637166 ttggggtagaactgaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaattaaggttccaattttata-aattgg 46637068  T
Q  318 ggaagaaagagc 329  Q
    ||||||||||||    
T  46637067 ggaagaaagagc 46637056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 44 - 323
Target Start/End: Original strand, 44158807 - 44159088
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    |||||||||||||| || ||||| ||||| ||||| ||||||||||| |  |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  44158807 catcaccattaaacttgaagcttgaagatgaagctcgactttcataactattttttcccataatcccaccccccttcatttcagattcaatttcaatagt 44158906  T
Q  144 tttgcttgaagaaattttggtgattttgaatttcggattcaat--nnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaat 241  Q
    ||||||| |||||||||||  |||||||  |||| ||||||||          |||||||||| ||| |||||||||||||||||||| | |||||| ||    
T  44158907 tttgcttcaagaaattttgtggattttggctttcagattcaatacgaaaaaaaattagggtttcaagttttttgaattggggaagaacttgaccacttat 44159006  T
Q  242 tattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 323  Q
    ||||| | ||||||| ||  ||||| || |||||||| || |||||  ||| |||||| |||||||||| | ||| ||||||    
T  44159007 tattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaatcagggtttcaattttatacaattggggaaga 44159088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 44 - 329
Target Start/End: Original strand, 42135761 - 42136045
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| | ||||||||||||||| || || | |    
T  42135761 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccatattcccaccccccttcatttcagattcaatttcaatagt 42135860  T
Q  144 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 243  Q
    ||||||| |||||||||||   ||||||| |||| ||||||||        |||| ||||| ||| ||||||||||||||||||||   | |||| ||||    
T  42135861 tttgcttcaagaaattttgtgaattttgactttcagattcaatacgaaaaaatta-ggtttcaagttttttgaattggggaagaactggagcacttatta 42135959  T
Q  244 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||| |  |||||| ||  ||||| || |||||||| || |||||  ||||||| ||||||||||||| | ||| |||||| |||||    
T  42135960 ttggagaaaatttaggtgattttagaatgtagattgcagattgtgtaattaggattccaattttatacaattggggaagatagagc 42136045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 329
Target Start/End: Original strand, 6576774 - 6576906
Alignment:
Q  197 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 296  Q
    |||||||||||| ||||||||||||| || |||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||  |||||||    
T  6576774 tagggtttgaagttttttgaattgggaaaaaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtttaattagg 6576873  T
Q  297 gttccaattttatatatttgaggaagaaagagc 329  Q
    |||||||||||||| | ||| ||||||||||||    
T  6576874 gttccaattttatacaattggggaagaaagagc 6576906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 44 - 329
Target Start/End: Complemental strand, 35478660 - 35478378
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    |||||||||||||| || ||||| ||||| ||||| |||||||||||    |||| ||| ||  |||||||| ||||||||  ||||  | || || | |    
T  35478660 catcaccattaaacttgaagcttcaagatgaagctcgactttcataacaattttttcccatattcccaccccccatcattttggattttatttcaatagt 35478561  T
Q  144 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 243  Q
    ||||||| ||||| |||||  |||||||  |||  ||||||||        |||||||||||||| |||||||||||||||| |||   |||||| ||||    
T  35478560 tttgcttcaagaagttttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaaaaactaaaccacttatta 35478461  T
Q  244 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||| | ||||||| ||  ||||| ||||||||||   | |||||  |||||||||| |||||||| | | ||||||||||||||||    
T  35478460 ttggaggaaatttaggtgattttagagtgtagat---agattgtgtaattagggtttcaattttaaacaattgaggaagaaagagc 35478378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 50554634 - 50554500
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| ||| ||| | ||| ||| ||| ||||    
T  50554634 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaagtctaggtaacaaattataacatta 50554535  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| |||||||||||| ||||||||||||    
T  50554534 gggttccaaatttatatatttggggaagaaagagc 50554500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 18183205 - 18183063
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||  ||||||||||||||||||| |||||||| ||||| || || ||||||||||| || |||| ||| |   |||||||| ||    
T  18183205 ggacaccaacattcaagctttctcacatcaccattaaacttggagcttgaagatgaaactcgactttcataactgttttttcccatgttcccacccc-ca 18183107  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttg 162  Q
    ||||||||||| ||| || || | |||||||| |||||||||||    
T  18183106 tcatttcagatccaatttcaatagttttgcttcaagaaattttg 18183063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 198 - 329
Target Start/End: Complemental strand, 33679680 - 33679549
Alignment:
Q  198 agggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattaggg 297  Q
    ||||||||||| ||||||||||||||||||||   || | | ||||||| | ||||||| ||  ||||| ||||||| ||| || |||||  ||||||||    
T  33679680 agggtttgaagttttttgaattggggaagaactggactagttattattggaggaaatttaggtgattttagagtgtatattgcagattgtgtaattaggg 33679581  T
Q  298 ttccaattttatatatttgaggaagaaagagc 329  Q
    |||||||||| || | ||||||||||||||||    
T  33679580 ttccaattttgtacaattgaggaagaaagagc 33679549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 31237273 - 31237139
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||| || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  31237273 attagggttttaagttttttgaattggggaagaacattgacatcaattaatggaagaaatttgggggattttgaactctaggtaacaaattataacatta 31237174  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    |||||||||  ||||||||||| ||||||||||||    
T  31237173 gggttccaaaattatatatttggggaagaaagagc 31237139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 18058254 - 18058121
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||| ||||||| |||| |||||||||||||| |||  ||  ||||| |  ||||| ||||| | |||||| | | ||||| ||| ||||||||||||    
T  18058254 attaggttttgaagtttttagaattggggaagaatgttgtcatcaattaattgaagaagttttgaggattttgaactctagatgacaaattgtaaaatta 18058155  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
     ||||||||||||||| ||||| |||||||||||    
T  18058154 aggttccaattttataaatttggggaagaaagag 18058121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 15105986 - 15106116
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | ||||| | ||  ||| ||| ||||    
T  15105986 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgtaagaaattttggggattttgaactgtaggtgacgaattataacatta 15106085  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    || |||||| |||||||||||| ||||||||    
T  15106086 ggattccaaatttatatatttggggaagaaa 15106116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 6817333 - 6817200
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| |||  ||||||||||||||||||| ||  ||  ||||  || |||||||||| ||||||||| | | ||| | ||| ||| ||| ||||    
T  6817333 attagggttttaagtcttttgaattggggaagaacattgacatcaattcatggaagaaattttaggaattttgaactctaggtaacaaattataacatta 6817234  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    |||||| || |||||||||||| |||||||||||    
T  6817233 gggttctaaatttatatatttggggaagaaagag 6817200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 18180900 - 18180818
Alignment:
Q  196 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagatt 278  Q
    ||||||||||||| |||||||||||||||||||    |||||| |||| || | ||||||||||  |||||||||||||||||    
T  18180900 ttagggtttgaagttttttgaattggggaagaatcggaccacttattactggaggaaattttggtgattttggagtgtagatt 18180818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 45045365 - 45045232
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||  | | | ||| ||| ||||    
T  45045365 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctatgtgataaattataacatta 45045266  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| |||||||||||| |||||||||||    
T  45045265 gggttccaaatttatatatttggggaagaaagag 45045232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 310
Target Start/End: Original strand, 27952167 - 27952282
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | |||||||  |  || || || ||||||||| | |||||  |||||    
T  27952167 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaagtgatattagaatgtagattaaaaattgtgtaatta 27952266  T
Q  295 gggttccaattttata 310  Q
    ||||| ||||||||||    
T  27952267 gggttacaattttata 27952282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 329
Target Start/End: Original strand, 2870712 - 2870845
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  2870712 attagggttttaag-tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 2870810  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| || ||||||||| | ||||||||||    
T  2870811 gggttccaaattgatatatttgggaaagaaagagc 2870845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 3012309 - 3012175
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| |   |||||| | | ||| | ||| |||  || ||||    
T  3012309 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttggtagattttgaactataggtgacaaattagaacatta 3012210  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| |||||||||||| ||||||||||||    
T  3012209 gggttccaaatttatatatttggggaagaaagagc 3012175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 162
Target Start/End: Complemental strand, 33679814 - 33679696
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||  | |||| ||  ||  |||||||| ||||||||| ||||  | || || | |    
T  33679814 catcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttcctatattcccaccccccatcatttcggattttatttcaatagt 33679715  T
Q  144 tttgcttgaagaaattttg 162  Q
    ||||||| |||||||||||    
T  33679714 tttgcttcaagaaattttg 33679696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 33599580 - 33599542
Alignment:
Q  287 taaaattagggttccaattttatatatttgaggaagaaa 325  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  33599580 taaaattagggttccaaatttatatatttgtggaagaaa 33599542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 25172876 - 25172944
Alignment:
Q  334 cattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattggtctctgct 402  Q
    |||||||| ||||||||| || ||  ||||||||||||||||||||| |||  || ||| |||||||||    
T  25172876 cattttctgcaaatcaatcaaattcgtccttggaaattttggtcactatcggtcaaattagtctctgct 25172944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 124; Significance: 1e-63; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 21 - 329
Target Start/End: Complemental strand, 26448342 - 26448037
Alignment:
Q  21 acatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatc 120  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||| ||| | |||||||||||| |||| |  || ||||| ||  ||||||| |||||    
T  26448342 acatcaacattcaaacactctcacatcaccattaaagatggagcttgaaggtgaagcttgactttgataactctttgtgcccatatgcccaccc-tcatc 26448244  T
Q  121 atttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattg 220  Q
    ||||||||||||| ||||||| |||||||||||||||||||||  ||| ||  |||  ||||||||        |||||||||||||| |||||||||||    
T  26448243 atttcagattcaatttgaacagttttgcttgaagaaattttgggtattctggtttttagattcaataaaaaaa-attagggtttgaagttttttgaattg 26448145  T
Q  221 gggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgagga 320  Q
     | ||| ||||||||||||||||||| |||||||||| ||  ||||||||| ||||| | |||||||||||||| |||||||||||||||||||||||||    
T  26448144 agaaaggacgttaccactaattattggaagaaattttaggg-ttttggagtatagataaaatattgtaaaattaaggttccaattttatatatttgagga 26448046  T
Q  321 agaaagagc 329  Q
     ||||||||    
T  26448045 tgaaagagc 26448037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 107 - 327
Target Start/End: Complemental strand, 30501610 - 30501391
Alignment:
Q  107 acccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttga 206  Q
    ||||||||  ||||||||||||||||| ||||||| ||||||||||||||||||| | || | ||| |||||||||||||        || ||||||||     
T  30501610 acccacccaccatcatttcagattcaatttgaacagttttgcttgaagaaattttagggaatctgattttcggattcaataaaaaaaaat-agggtttgg 30501512  T
Q  207 agctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattt 306  Q
     | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  30501511 ggttttttgaattggggaagtacgttaccactaattattgaaagaaattttgggaattttggagtgtagattaaagattgtaaaattagggttccaattt 30501412  T
Q  307 tatatatttgaggaagaaaga 327  Q
    |||||||| ||||||||||||    
T  30501411 tatatattggaggaagaaaga 30501391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 121 - 325
Target Start/End: Original strand, 40962981 - 40963184
Alignment:
Q  121 atttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattg 220  Q
    ||||||||||||| ||||||||||||||||||||||||||||  |||| ||   ||||||||||||        |||||||||||||  |||||||||||    
T  40962981 atttcagattcaatttgaacaattttgcttgaagaaattttgtggattctggtattcggattcaataaaaaaa-attagggtttgaatttttttgaattg 40963079  T
Q  221 gggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgagga 320  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||    
T  40963080 gggaagaacgttaccactaattattgtaagaaattttgggaattttggagtgtagattaaagattgtaaaattagggttccaattttatatatttgggga 40963179  T
Q  321 agaaa 325  Q
    |||||    
T  40963180 agaaa 40963184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 327
Target Start/End: Original strand, 1847154 - 1847462
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || ||||||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| ||    
T  1847154 ggacaccaacattcaagctctctcacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatattcccacccccca 1847253  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 218  Q
    |||||||||||||||  | || | |||||||| |||||||||||  |||||||  ||||  |||||||        ||||||||||| || ||||| |||    
T  1847254 tcatttcagattcaatatcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgtagttttttaaat 1847353  T
Q  219 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 318  Q
    |||||||||||   |||| |  |||||| | ||||||||||  |||||| ||||||||||||| |||||  ||||||||||||||||||||| ||||| |    
T  1847354 tggggaagaactgaaccattttttattggatgaaattttggtgattttgaagtgtagattacaaattgtgtaattagggttccaattttatacatttggg 1847453  T
Q  319 gaagaaaga 327  Q
    |||||||||    
T  1847454 gaagaaaga 1847462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 28 - 325
Target Start/End: Original strand, 41945603 - 41945898
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| | |||||| ||    
T  41945603 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccaccccccttcattttag 41945702  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| ||||||||||| || |||||  |||||||  |||| ||||||||        |||||| |||| |  ||||||| ||||||||||    
T  41945703 attcaatttcaacagttttgcttgaataa-ttttgcagattttggttttcagattcaattaaaaaa-attaggatttgcaattttttgatttggggaaga 41945800  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| ||| |  |||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  41945801 acgtgacccttaattattggaagaaaatttagagattttggagtgtagattacacatcgtaaaattagggttccaattttatatatttggggaagaaa 41945898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 31 - 327
Target Start/End: Complemental strand, 32843017 - 32842721
Alignment:
Q  31 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 130  Q
    ||||||| ||| |||||||||||||||||  || || ||||| ||||| |||||| | || |  | |||||| ||| |||||| | |||||||||  |||    
T  32843017 tcaagcattctgacatcaccattaaacataaagtttgaagatgaagctcgactttgagaacttgtgttgcccatacgcccaccacccatcatttcgcatt 32842918  T
Q  131 caaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacg 230  Q
    |||  ||||||||||||||||||    |||||| ||||||| ||||| ||||||||        |||||||||||||| |||| ||| |  |||||||||    
T  32842917 caatctgaacaattttgcttgaattttttttggggattttggatttcagattcaatcaaaacaaattagggtttgaagtttttagaagtaaggaagaacg 32842818  T
Q  231 ttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 327  Q
    ||  || |||||| || |||||||||||||||||||||| ||||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||    
T  32842817 ttgtcattaattaatggaagaaattttgggaattttggattgtagattagagattgaaaaattagggttccaattttatagatttgaggaagaaaga 32842721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 95 - 321
Target Start/End: Complemental strand, 49495011 - 49494787
Alignment:
Q  95 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 193  Q
    |||||||| |||||||||||| ||||||||||||||||| |  |||| ||||| |||||| |||||| | ||||||   ||||||||||||||           
T  49495011 ttttgcccatacacccacccc-catcatttcagattcaattataacagttttgtttgaaggaattttcgggatttttttatttcggattcaatcaaaaa- 49494914  T
Q  194 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 293  Q
     |||||||||||| | | ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||    
T  49494913 -attagggtttgaggttatttgaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatt 49494815  T
Q  294 agggttccaattttatatatttgaggaa 321  Q
    ||||||||||||||||| ||||| ||||    
T  49494814 agggttccaattttatacatttggggaa 49494787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 28 - 329
Target Start/End: Original strand, 48634872 - 48635173
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| || ||||  || ||  |||||||| |||||||||||    
T  48634872 cattcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactgtttttttccatattcccaccccccatcatttcag 48634971  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || || | |||||||| |||||||||||  |||||||| ||||  |||||||        |||||||||||||| ||||||||||||||||||    
T  48634972 attcaatttcaatagttttgctttaagaaattttgaggattttgactttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaaga 48635071  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 327  Q
    ||   |||| | || |||| | || ||||| |  ||||| ||||||| |||  | |||||  ||||||||||||||| ||||| | ||| ||||||||||    
T  48635072 actggaccatttataattggaggatattttagtgattttagagtgtaaattgtagattgtgtaattagggttccaatgttatacaattggggaagaaaga 48635171  T
Q  328 gc 329  Q
    ||    
T  48635172 gc 48635173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 40 - 329
Target Start/End: Complemental strand, 24382293 - 24382004
Alignment:
Q  40 ctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaa 139  Q
    ||||||||||||||| || |||||||| ||||| ||| |  ||||||||||  | ||||  || ||  |||||||| ||||||||||||||||| || ||    
T  24382293 ctcacatcaccattatacttggagcttcaagatgaagttaaactttcataacagtttttttccatattcccaccccccatcatttcagattcaatttcaa 24382194  T
Q  140 caattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccacta 239  Q
     | |||||||| || |||| |||  |||||||| |||| ||||||||        |||||||||||||| ||||| ||||||||||||||   | ||||     
T  24382193 tagttttgcttcaaaaaatcttgaggattttgactttcagattcaatgcgaaaaaattagggtttgaagattttttaattggggaagaactggatcactt 24382094  T
Q  240 attattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    |||| |||| ||||||||||  |||||||||||||||||  | |||||  |||||||||| ||| |||||| | ||| ||||||||||||    
T  24382093 attactgaaggaaattttggtgattttggagtgtagattgaagattgtgtaattagggttacaactttatacaattggggaagaaagagc 24382004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 210 - 325
Target Start/End: Complemental strand, 37865791 - 37865676
Alignment:
Q  210 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 309  Q
    ||||||| |||||||||||||| |||  ||||||||  |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  37865791 tttttgatttggggaagaacgtgacccttaattattagaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttat 37865692  T
Q  310 atatttgaggaagaaa 325  Q
    ||||||| ||||||||    
T  37865691 atatttggggaagaaa 37865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 48 - 310
Target Start/End: Complemental strand, 31886088 - 31885827
Alignment:
Q  48 accattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttg 147  Q
    |||||||||| |||| ||| ||||| ||||| ||||||||||| || |||| ||| ||  |||||||| | |||||| |||||||| || || | | |||    
T  31886088 accattaaacttggatcttgaagatgaagctcgactttcataactgttttttcccatattcccacccc-cgtcattttagattcaatttcaatagtcttg 31885990  T
Q  148 cttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattga 247  Q
    ||| |||||||||||  |||||||  ||||  |||||||        |||||||||||||| ||||| ||||||||||||||   |||||| |||||||     
T  31885989 cttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttcaattggggaagaactgaaccacttattattgg 31885890  T
Q  248 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 310  Q
    | ||||||||||  ||||| ||||||||||| || |||||  |||||| ||||||||||||||    
T  31885889 aggaaattttggtgattttagagtgtagattgcagattgtgtaattagagttccaattttata 31885827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 2975883 - 2975749
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||| ||||||||||||||||||||   ||| || ||||||| ||||||||||||  ||||||||||||||| |  | |||||  |||||    
T  2975883 attagggtttgaagttttttgaattggggaagaactggaccgcttattattggaagaaattttggtgattttggagtgtagaatgaagattgtgtaatta 2975784  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
      |||||||||||||||||||| ||||||||||||    
T  2975783 aagttccaattttatatatttggggaagaaagagc 2975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 325
Target Start/End: Original strand, 33051144 - 33051253
Alignment:
Q  216 aattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 315  Q
    ||||||||||||| ||||||||||||||||| ||||  |||||| ||||||||||||| ||||| |||||||| ||||| |||||| |||||||| ||||    
T  33051144 aattggggaagaatgttaccactaattattggaagattttttggaaattttggagtgtggattaaatattgtataattatggttcctattttatacattt 33051243  T
Q  316 gaggaagaaa 325  Q
    | ||||||||    
T  33051244 ggggaagaaa 33051253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 37886364 - 37886239
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   |||||||||||||||| ||    
T  37886364 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccctcatcattttag 37886265  T
Q  128 attcaaattgaacaattttgcttgaa 153  Q
    |||||| || |||| |||||||||||    
T  37886264 attcaatttcaacagttttgcttgaa 37886239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 229
Target Start/End: Original strand, 23775152 - 23775353
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    |||||||||||||||||| ||||||| ||| | |||||  ||||| ||||| ||||||||||| || |||| ||| ||  |||| ||| |||||||||||    
T  23775152 cattcaagcactctcacaacaccattgaacttagagctcgaagatgaagctcgactttcataactgttttttcccatattcccatcccccatcatttcag 23775251  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || || | |||||||| |||||||||||  |||||||  ||||  ||| |||        |||||||||||||| |||||||| |||||||||    
T  23775252 attcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattaaatacgaaaaaattagggtttgaagttttttgaagtggggaaga 23775351  T
Q  228 ac 229  Q
    ||    
T  23775352 ac 23775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 227
Target Start/End: Complemental strand, 33112441 - 33112233
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacaccca-cccctc 117  Q
    ||||| || |||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| || |||| ||| ||  |||| |||| |    
T  33112441 ggacaccaacattcaagcactctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgttttttcccatattcccaccccccc 33112342  T
Q  118 atcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaa 217  Q
    |||||||||||| ||| || || | |||||||| ||||||||||   ||||||||  |||  |||||||         ||||||||||||| ||||||||    
T  33112341 atcatttcagatccaatttcaatagttttgcttcaagaaattttaaggattttgacattcaaattcaatgcaaaaa-gttagggtttgaagttttttgaa 33112243  T
Q  218 ttggggaaga 227  Q
    ||||||||||    
T  33112242 ttggggaaga 33112233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 329
Target Start/End: Complemental strand, 35862129 - 35861831
Alignment:
Q  31 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagatt 130  Q
    |||| |||||||||||||||||||||||| |||||| ||||| ||  |  ||||| ||||||| |||||||| |||  ||||| | ||||||||||||||    
T  35862129 tcaaacactctcacatcaccattaaacatagagcttgaagatgaaaatcaactttgataattgtttttgcccatacgtccaccacccatcatttcagatt 35862030  T
Q  131 caaattgaacaattttgcttgaagaaattttggtgat-tttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaac 229  Q
    |||  ||||||      ||||||| |||||||| ||| |||||||||||||||||||        | |||| || |||| ||||| || ||||||||||     
T  35862029 caacctgaacaccaaaacttgaaggaattttggggatctttgaatttcggattcaataaaaaaa-aataggtttagaag-ttttttaaatggggaagaat 35861932  T
Q  230 gttaccactaattattgaaaga-aattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 328  Q
    |||  ||  |||||  | |||| | ||||||| |||||||| | ||||||||| ||| || |||||||||| |||||||||| ||||| |||||||||||    
T  35861931 gttgtcatcaattaaaggaagatatttttggggattttggactatagattacaaattttataattagggtttcaattttatagatttggggaagaaagag 35861832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 45897640 - 45897487
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattg-cttttgcccttacacccacccctc 117  Q
    ||||| || |||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||| ||||  |  |||| ||| ||  |||||||| |    
T  45897640 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgacttttataaccgtttttttcccatattcccaccccac 45897541  T
Q  118 atcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttg 171  Q
    ||||||||| |||||| || || | |||||||| |||||||||||  |||||||    
T  45897540 atcatttcatattcaatttcaatagttttgcttcaagaaattttgaggattttg 45897487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 329
Target Start/End: Complemental strand, 18429314 - 18429030
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    ||||||| |||||| |||||||| ||||| ||||| |||||||||||    |||| ||||||  | ||||||   |||||||| |||||| || || | |    
T  18429314 catcaccgttaaacttggagcttgaagatgaagctcgactttcataacaattttttcccttattctcaccccgt-tcatttcaaattcaatttcaatagt 18429216  T
Q  144 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 243  Q
    ||||||| |||||||||||  |||||||| |||| ||||||||        ||| |||||| ||| ||||||||||||||||||||   |||||| ||||    
T  18429215 tttgcttcaagaaattttgtagattttgactttcagattcaatacaaaaaaattcgggtttcaagttttttgaattggggaagaactggaccacttatta 18429116  T
Q  244 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||  | ||||||| ||  ||||| || | |||||| || |||||  |||||||||| |||||||||| | ||| |||||| |||||    
T  18429115 ttagaggaaatttaggtgattttagaatatagattgcagattgtgtaattagggtttcaattttatacaattggggaagacagagc 18429030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 329
Target Start/End: Complemental strand, 45256058 - 45255773
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataat--tgcttttgcccttacacccacccctcatcatttcagattcaaattgaaca 141  Q
    |||||||||||||| |||||||| || || ||||| |||||||||||   |  |||| ||| ||  | |||||| | ||||||||||||||| || || |    
T  45256058 catcaccattaaacttggagcttgaaaatgaagctcgactttcataacaattttttttcccatattctcacccc-cttcatttcagattcaatttcaata 45255960  T
Q  142 attttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaat 241  Q
     ||||| || |||||||||||  |||||||  |||| ||||||||        |||||||||| ||| ||||||||||||||||||||   |||||| ||    
T  45255959 gttttgtttcaagaaattttgtggattttggctttcagattcaatacgaaaa-attagggtttcaagttttttgaattggggaagaactggaccacttat 45255861  T
Q  242 tattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||| | ||||||| ||  ||||| || |||||||| || |||||  ||||||||||| ||||||||| | ||| |||||| |||||    
T  45255860 tattggaggaaatttaggtgattttagaatgtagattgcagattgtgtaattagggttcaaattttatacaattggggaagacagagc 45255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 2976024 - 2975887
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||| ||||||||||||||||||| |||| ||| ||||| ||||| |||||| |||| || |||| ||| ||  ||||||||| |    
T  2976024 ggacaacaacattcaagcaatctcacatcaccattaaacttggaacttgaagatgaagctcgactttgataactg-tttttcccatattcccacccctta 2975926  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaa 157  Q
    ||||||||||||||| || || | |||||||| ||||||    
T  2975925 tcatttcagattcaatttcaatagttttgcttcaagaaa 2975887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 44 - 310
Target Start/End: Complemental strand, 33851555 - 33851291
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||||||    |||| |||  |  || ||||| | ||||||||||||||| || || | |    
T  33851555 catcaccattaaacttggagcttgaagatgaagctcgactttcataacaattttttcccagattcc-accccccttcatttcagattcaatttcaatagt 33851457  T
Q  144 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 243  Q
    ||| ||| |||||||||||  |||||||  |||| ||||||||        |||||||||| ||  ||||||||||||||||||||   |||||| ||||    
T  33851456 ttttcttcaagaaattttgtggattttggctttcagattcaatacaaaaaaattagggtttcaaattttttgaattggggaagaactggaccacttatta 33851357  T
Q  244 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 310  Q
    ||| | ||||||| ||  ||||| || |||||||| || |||||  ||||| |||||||||||||||    
T  33851356 ttggaggaaatttaggtgattttagaatgtagattgcagattgtgtaatta-ggttccaattttata 33851291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 2378576 - 2378709
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||| ||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  2378576 attagggttttaagttttttgaattagggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataatatta 2378675  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| |||||||||||| |||||||||||    
T  2378676 gggttccaaatttatatatttggggaagaaagag 2378709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 42282135 - 42282268
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||  | ||| ||| ||| ||||    
T  42282135 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttggggattttgaattctatgtgacaaattataacatta 42282234  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| |||||||||||  |||||||||||    
T  42282235 gggttccaaatttatatatttagggaagaaagag 42282268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 310
Target Start/End: Original strand, 10380511 - 10380719
Alignment:
Q  103 ttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttaggg 201  Q
    ||||||||||||| ||| |||| |||||||| || || | |||||||| |||||||||||  |||||||  ||||  |||||||        | ||||||    
T  10380511 ttacacccaccccccatgattttagattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatatgaaaaaaattaggg 10380610  T
Q  202 tttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcc 301  Q
    ||||||| ||||||||||||||||||||   |||| | || |||| | || |||||||  |||||  |||||| |||||| |||||  |||||||||| |    
T  10380611 tttgaagatttttgaattggggaagaactggaccatttataattggaggatattttggagattttaaagtgtaaattacagattgtgtaattagggtttc 10380710  T
Q  302 aattttata 310  Q
    ||| |||||    
T  10380711 aatgttata 10380719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 329
Target Start/End: Original strand, 610850 - 610984
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  |||||||||||||||| ||| || | | | | | ||| ||| ||| ||||    
T  610850 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgaaagaaattttggggattgtgaactcttggtgacaaattataacatta 610949  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
     ||||||||  ||||||||||| ||||||||||||    
T  610950 aggttccaaaattatatatttggggaagaaagagc 610984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 325
Target Start/End: Original strand, 51686013 - 51686143
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||    
T  51686013 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacatta 51686112  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    |||||  || |||||||||||| ||||||||    
T  51686113 gggttagaaatttatatatttggggaagaaa 51686143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 17516608 - 17516741
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||| ||||||||| ||  ||  ||||  || ||||||||| | | |||||| | | ||| ||||| ||| ||| ||||    
T  17516608 attagggttttaagttttttgaattagggaagaacattgacatcaattcatggaagaaatttggaggattttgaactctaggttacaaattataacatta 17516707  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    | ||||||| |||||||||||| |||||||||||    
T  17516708 gagttccaaatttatatatttggggaagaaagag 17516741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 21350257 - 21350390
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| ||||||||||||||||| || ||  ||  ||||  || ||||||||| ||| |||||  | | ||| | ||| ||| ||| ||||    
T  21350257 attagggttttaagttttttgaattggggaagtacattgacatcaattcatggaagaaatttgggggattttaaactctaggtgacaaattataacatta 21350356  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| |||||||||||| |||||||||||    
T  21350357 gggttccaaatttatatatttggggaagaaagag 21350390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 30598791 - 30598658
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||    
T  30598791 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtgacaaattataacatta 30598692  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| |||||||||||| || ||||||||    
T  30598691 gggttccaaatttatatatttggggtagaaagag 30598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 329
Target Start/End: Complemental strand, 44268432 - 44268301
Alignment:
Q  197 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 296  Q
    |||||||| ||| ||||||||||||| |||||| ||  || |||||  || ||||||||| ||| |||||| | | | | | ||| ||| ||| ||||||    
T  44268432 tagggttt-aagttttttgaattgggaaagaacattgacattaattcatggaagaaatttgggggattttgaactctgggtgacaaattataacattagg 44268334  T
Q  297 gttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||| |||||||||||| ||||||||||||    
T  44268333 gttccaaatttatatatttggggaagaaagagc 44268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 23887622 - 23887489
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||  |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||||||| || |||||  |||||    
T  23887622 attagggtttgaaattttttgaattggggcagaactcaaccacttattattggaggaaattttcatgattatagagtgtagattgcagattgtgtaatta 23887523  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    || || |||||||||| | ||| ||||||||||||    
T  23887522 ggatttcaattttatacaattg-ggaagaaagagc 23887489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 27897646 - 27897512
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||| ||||| ||| ||||| |||||||||||||| ||  ||  ||||  || |||||||||  || |||||| | | ||| | ||| ||| ||| ||||    
T  27897646 attatggttttaagtttttttaattggggaagaacattgacatcaattcatgtaagaaatttgagggattttgaactctaggtaacaaattataacatta 27897547  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| |||||||||||| ||||||||||||    
T  27897546 gggttccaaatttatatatttggggaagaaagagc 27897512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 23876095 - 23875963
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||| ||||||| |||||||||||||||||||  ||  ||  ||||| || ||||||||||| |||||||| | | || || ||| ||  |||||| |    
T  23876095 attaggttttgaagttttttgaattggggaagaagattgtcatcaattaatggaagaaattttgagaattttgaactcta-atgacaaatgataaaataa 23875997  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||||||| || ||||  |||||||||||    
T  23875996 gggttccaattttgtagattttgggaagaaagag 23875963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 328
Target Start/End: Complemental strand, 45897467 - 45897342
Alignment:
Q  203 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 302  Q
    |||||| |||||||||||| | |||||   | |||| ||||||| | ||||||||    ||| | ||||||||||| ||||||||  ||||||||||| |    
T  45897467 ttgaagttttttgaattggagcagaactgaagcacttattattggaggaaattttcatgattatagagtgtagattgcatattgtgtaattagggttcta 45897368  T
Q  303 attttatatatttgaggaagaaagag 328  Q
    |||||||| | ||| |||||||||||    
T  45897367 attttatacaattggggaagaaagag 45897342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 13466611 - 13466655
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagat 72  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||    
T  13466611 cattcaagtactctcacatcaccattaaacatagagcttcaagat 13466655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 23292023 - 23291889
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| |||  ||||||||||||||||||| ||  |  |||||  || ||||||||| ||  |||||| | | ||||| ||  ||| ||| ||||    
T  23292023 attagggttttaagtcttttgaattggggaagaacattgacgttaattcatggaagaaatttgggagattttgaactctagatgacgaattataacatta 23291924  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| |||||||||||   |||||||||||    
T  23291923 gggttccaaatttatatatttatagaagaaagagc 23291889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 380
Target Start/End: Complemental strand, 30501367 - 30501321
Alignment:
Q  334 cattttctacaaatcaattaatttgatccttggaaattttggtcact 380  Q
    |||||||| ||||||||| |||||  |||||||||||||||||||||    
T  30501367 cattttctgcaaatcaatcaatttcgtccttggaaattttggtcact 30501321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 7e-62; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 28 - 325
Target Start/End: Original strand, 39922509 - 39922806
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  | ||||||||| ||   ||||| | |||||||| ||    
T  39922509 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctccttttgcccatatgaccacctcccatcattttag 39922608  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  39922609 attcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttggggaaga 39922708  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  39922709 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 39922806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 28 - 325
Target Start/End: Original strand, 39084654 - 39084951
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| ||    
T  39084654 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttag 39084753  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  39084754 attcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttggggaaga 39084853  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  39084854 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagagttccaattttatatatttggggaagaaa 39084951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 28 - 325
Target Start/End: Original strand, 39190321 - 39190618
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| ||    
T  39190321 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttag 39190420  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || || | |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  39190421 attcaatttcaatagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaaga 39190520  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  39190521 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 39190618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 42879873 - 42879576
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||| ||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||| | |||||||| ||    
T  42879873 cattcaatcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacctcccatcattttag 42879774  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  42879773 attcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaaga 42879674  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  42879673 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 42879576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 43778976 - 43778681
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  | ||||||||| ||   ||||| | |||||||| ||    
T  43778976 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctccttttgcccatatgaccacctcccatcattttag 43778877  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  43778876 attcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgcaattttttga-ttggggaaga 43778779  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||    
T  43778778 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggcgaagaaa 43778681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 28 - 325
Target Start/End: Original strand, 5485554 - 5485851
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||  |||||||||||| |||  |  |||||||| ||   || || | |||||||| ||    
T  5485554 cattcaagcactctcacatcaccattaaacatggaggatgaagacgaagcttgactttgatagctctttttgcccatatgaccgcctcccatcattttag 5485653  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  5485654 attcaatttcaacatttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgtaattttttgatttggggaaga 5485753  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  5485754 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacatggtaaaattagggttccaattttatatatttggggaagaaa 5485851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 44993397 - 44993100
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    |||||||||||| |||||||||||||||||||||||  | ||||| || ||||||||| |||  |  |||||||| ||   ||||| | |||||||| ||    
T  44993397 cattcaagcactttcacatcaccattaaacatggaggatgaagatgaaacttgactttgatagctctttttgcccatatgaccacctcccatcattttag 44993298  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  44993297 attcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaaga 44993198  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| ||||   |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  44993197 acgtgacccttaattattggaagaaaatttgaagattttggagtgtagattacacattgtaaaattaggattccaattttatatatttggggaagaaa 44993100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 195 - 324
Target Start/End: Complemental strand, 13438275 - 13438146
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||    
T  13438275 attagggtttgaagttttttgaattggggaagaaagttaccactaattattggaagaaattttgggaattttggagtgtacattaaagattgtaaaatta 13438176  T
Q  295 gggttccaattttatatatttgaggaagaa 324  Q
    ||||| | |||||||||||||| |||||||    
T  13438175 gggtttctattttatatatttggggaagaa 13438146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 129 - 314
Target Start/End: Original strand, 25994708 - 25994897
Alignment:
Q  129 ttcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta----ttagggtttgaagctttttgaattgggga 224  Q
    ||||| ||||||| ||||||||||||||||||||| |||| ||  |||||||||||||        |    | |||||||| || ||||||||||| |||    
T  25994708 ttcaatttgaacagttttgcttgaagaaattttggggattctggttttcggattcaataaaaaaaaaaaaatcagggtttggagttttttgaattgagga 25994807  T
Q  225 agaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 314  Q
    |||| ||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  25994808 agaatgttaccactaattattggaagaaattttgaggattttggagtgtagattacagattgtaaatttagagttccaattttatatatt 25994897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 195 - 325
Target Start/End: Complemental strand, 230869 - 230740
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||  |||||||||| || ||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||    
T  230869 attagggtttgaaattttttgaattagg-aagaacgttaccactaattattggaagaaattttggggactttggagtgtagattacagattgtaaaatta 230771  T
Q  295 gggttccaattttatatatttgaggaagaaa 325  Q
    || | |||||||||||||||||  |||||||    
T  230770 ggatgccaattttatatatttggagaagaaa 230740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 28 - 325
Target Start/End: Original strand, 32653133 - 32653430
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||| ||||||||||||||||||||||||||| ||  | ||||| |||||||||||| |||  |  |||||||| ||   ||||||| | |||||| ||    
T  32653133 cattcgagcactctcacatcaccattaaacatgaaggatgaagatgaagcttgactttgatagctctttttgcccatatgaccacccc-cttcattttag 32653231  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaattggggaag 226  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  ||||  |||||||        | |||||||||| |  ||||||| |||||||||    
T  32653232 attcaatttcaacagttttgcttgaatgaattttgcagattttggttttcatattcaattaaaaaaaaattagggtttgtaattttttgatttggggaag 32653331  T
Q  227 aacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    ||| | |||  ||||||||| |||||| |||||  |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||  ||||||||    
T  32653332 aacatgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagagtttcaattttatatattttgggaagaaa 32653430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 329
Target Start/End: Original strand, 4519959 - 4520270
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||||| | ||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||| ||| ||   ||||||| ||    
T  4519959 ggacaccaacattcaagcactttgacatcaccattaaacttggagcttgaagatgaagctcgactttcataactgttttttcccatatttccacccc-ca 4520057  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat--nnnnnnntattagggtttgaagctttttga 216  Q
    |||||||| |||||  || || | |||||||| |||||||||||  |||||||  |||| ||||||||          |||||||||| ||| |||||||    
T  4520058 tcatttcatattcattttcaatagttttgcttcaagaaattttgaggattttggctttcagattcaatacaaaaaaaaattagggtttcaagttttttga 4520157  T
Q  217 attggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttg 316  Q
    ||||| |||||||   |||||| |||||   | ||||||||||  ||||| ||||||||||| || ||| |  ||||||||||||||||||||||| |||    
T  4520158 attggagaagaactgaaccacttattatcagaggaaattttggtgattttagagtgtagattgcaaattttgtaattagggttccaattttatataattg 4520257  T
Q  317 aggaagaaagagc 329  Q
      |||||||||||    
T  4520258 gcgaagaaagagc 4520270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 44 - 310
Target Start/End: Complemental strand, 44557183 - 44556917
Alignment:
Q  44 catcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaat 143  Q
    |||||||||||||| |||||||  ||||| ||||| |||||||||||  | |||| ||| ||  |||||||||||||||||  ||||  | || || | |    
T  44557183 catcaccattaaacttggagctagaagatgaagctcgactttcataacagttttttcccatattcccacccctcatcattttggattttatttcaatagt 44557084  T
Q  144 tttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaatta 243  Q
    ||||||| ||||| |||||  |||||||  |||  ||||||||        |||||||||||||| ||||||||||||||||||||   |||||| ||||    
T  44557083 tttgcttcaagaatttttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaactggaccacttatta 44556984  T
Q  244 ttgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 310  Q
    ||| | ||||||| ||  ||||| ||||||||||| || |||||  ||||||  |||||||||||||    
T  44556983 ttggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattagaattccaattttata 44556917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 39294553 - 39294625
Alignment:
Q  196 ttagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttgg 268  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  39294553 ttagggtttgaagttttttgaattggggaagaacgttaccactaattattggaagaaattttggggattttgg 39294625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 329
Target Start/End: Original strand, 27626246 - 27626530
Alignment:
Q  45 atcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatt 144  Q
    ||||||||||||| |||||||| ||||| ||||| |||||||||||  | ||||  || ||  |||||||| ||||||||  ||||  | || || | ||    
T  27626246 atcaccattaaacttggagcttgaagatgaagctcgactttcataacagttttttgccatattcccaccccccatcattttggattttatttcaatagtt 27626345  T
Q  145 ttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattat 244  Q
    |||||| |||||||||||  |||||||  |||  ||||||||        |||||||||||||| |||||||||||||||||||    |||||| |||||    
T  27626346 ttgcttcaagaaattttgaggattttggttttaagattcaatacgaaaaaattagggtttgaagttttttgaattggggaagaattggaccacttattat 27626445  T
Q  245 tgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    || | |||||||     ||||| |||||||||||  | |||||  ||||||||||||||||||||| | ||| ||||||||||||    
T  27626446 tggaggaaatttaaatgattttagagtgtagattgtagattgtgtaattagggttccaattttatacaattggggaagaaagagc 27626530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 39 - 328
Target Start/End: Complemental strand, 51041314 - 51041027
Alignment:
Q  39 tctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattga 138  Q
    ||||||||||||||||||| |||||||| ||||| || || ||||||||||| || |||| ||| ||  |||||||  |||||||||| |||||| || |    
T  51041314 tctcacatcaccattaaacttggagcttgaagatgaaactcgactttcataactgttttttcccatattcccaccc--catcatttcatattcaatttca 51041217  T
Q  139 acaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccact 238  Q
    | | |||||||| ||    |||||  |||||||| |||| ||||||||         ||||||||||||| ||| ||||| ||||||||||   ||||||    
T  51041216 atagttttgcttcaaatttttttgaggattttgactttcagattcaatgcgaaaaagttagggtttgaagatttatgaataggggaagaaccgaaccact 51041117  T
Q  239 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 328  Q
     ||||  | | |||||  |||  |||||||| |||||||| || |||||  |||||||||| |||||||||| | ||| |||||||||||    
T  51041116 tattaccggaggaaatcatggtgattttggaatgtagattgcagattgtgtaattagggttacaattttatacaattggggaagaaagag 51041027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 215 - 327
Target Start/End: Complemental strand, 28100977 - 28100865
Alignment:
Q  215 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 314  Q
    ||||||||||||||||||  ||  ||||| || |||||||||||||||||||||| | ||||||| | |||||| |||||| ||| |||||||||| |||    
T  28100977 gaattggggaagaacgttgtcatcaattaatggaagaaattttgggaattttggactctagattataaattgtacaattagagtttcaattttatagatt 28100878  T
Q  315 tgaggaagaaaga 327  Q
    || ||||||||||    
T  28100877 tggggaagaaaga 28100865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 195 - 327
Target Start/End: Original strand, 13449984 - 13450107
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||| ||||||||||||||||||| ||||  | ||||||||| ||||         |||||||||||||| |||| | ||||||||||||    
T  13449984 attagggtttgaagttttttgaattggggaagaatgttaaaaataattattggaaga---------aattttggagtgtacattaaagattgtaaaatta 13450074  T
Q  295 gggttccaattttatatatttgaggaagaaaga 327  Q
    ||||| |||||||||| |||||  |||||||||    
T  13450075 gggtttcaattttatacatttggtgaagaaaga 13450107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 2691818 - 2691684
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||  ||  ||  ||||| || ||||||||||||  |||||| | | ||| | ||| ||| ||| ||||    
T  2691818 attagggttttaagttttttgaattggggaagaattttgtcatcaattaatggaagaaattttggagattttgaactctaggtgacaaattataacatta 2691719  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| |||||||||||| ||||||||||||    
T  2691718 gggttccaaatttatatatttggggaagaaagagc 2691684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 20820423 - 20820290
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||| ||| ||| |||||||||||| ||||||| ||  ||  ||||| || ||||||||||||| |||||  | | ||| | ||| ||| ||||||||    
T  20820423 attaggtttttaagttttttgaattggagaagaactttgtcatcaattagtggaagaaattttggggattttaaactttaggtgacaaattataaaatta 20820324  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| |||||||||||||| |||||||||    
T  20820323 gggttccaaatttatatatttgagaaagaaagag 20820290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 329
Target Start/End: Original strand, 35997284 - 35997568
Alignment:
Q  51 attaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgctt 150  Q
    ||||||| || ||||| ||||| ||||| ||||||| |||  | |||| ||| ||  |||||||| ||||||||||||||||| || || | ||||||||    
T  35997284 attaaacttgcagcttgaagatgaagctcgactttcttaacagttttttcccatattcccaccccccatcatttcagattcaatttcaatagttttgctt 35997383  T
Q  151 gaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaa------gaacgttaccactaattat 244  Q
     |||||||||||  |||||||  |||| ||||||||         ||||||||| ||| ||||| ||||||||||      ||||   |||||| |||||    
T  35997384 caagaaattttgtggattttggctttcagattcaatacgaaaaatttagggtttcaagttttttaaattggggaagaactggaactggaccacttattat 35997483  T
Q  245 tgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    || | ||||||| ||  || || || |||||||| || |||||  ||||||||||||||||||||| | ||| |||||| |||||    
T  35997484 tggaggaaatttaggttatattagaatgtagattgcagattgtgtaattagggttccaattttatacaattggggaagacagagc 35997568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 378
Target Start/End: Original strand, 39294645 - 39294721
Alignment:
Q  302 aattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtca 378  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||   | ||||||||||||||||    
T  39294645 aattttatatatttggggaagaaagagaaaagcattttctgcaaatcaatcaatttagcctttggaaattttggtca 39294721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 323
Target Start/End: Original strand, 47942413 - 47942541
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | ||||||| ||  || || || ||||||||| | |||||  |||||    
T  47942413 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttaggtgatattagaatgtagattatagattgtgtaatta 47942512  T
Q  295 gggttccaattttatatatttgaggaaga 323  Q
    |||||||||||||||| | ||| ||||||    
T  47942513 gggttccaattttatacaattggggaaga 47942541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 54387537 - 54387670
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||| | |||||| | | ||| | ||| ||||||| ||||    
T  54387537 attagggttttaagttttttgaattggggaagaactttggcatcaattcatggaagaaattttgaggattttgaactctaggtgacaaattgtaacatta 54387636  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| |||||||||||  || ||||||||    
T  54387637 gggttccaaatttatatatttagggcagaaagag 54387670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 44793358 - 44793243
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| ||||||||||||||||||||   |||||| ||||||| | |||||||  |  || || || ||||||||| | |||||  |||||    
T  44793358 attagggttttaagttttttgaattggggaagaactggaccacttattattggaggaaatttatgtgatattagaatgtagattatagattgtgtaatta 44793259  T
Q  295 gggttccaattttata 310  Q
    ||||||||||||||||    
T  44793258 gggttccaattttata 44793243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 11254512 - 11254378
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    ||||||||||  || |||||||||||||||||||| ||  ||  ||||| || ||||| ||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  11254512 attagggttttgagttttttgaattggggaagaacattgacatcaattaatggaagaattttgggggattttgaactctaggtgacaaattataacatta 11254413  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||| ||| |||||||||||| ||||||||||||    
T  11254412 gggtttcaaatttatatatttggggaagaaagagc 11254378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 10544500 - 10544605
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||| || ||| ||||||||||||||||| |||||| ||||| ||| | |||||| | || || |||||||| ||| |||||| | ||||||||||     
T  10544500 cattcaaacattctgacatcaccattaaacatagagcttgaagatgaagttcgactttgagaactgtttttgcccatacgcccaccacccatcatttcat 10544599  T
Q  128 attcaa 133  Q
    ||||||    
T  10544600 attcaa 10544605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 323
Target Start/End: Original strand, 10544693 - 10544778
Alignment:
Q  238 taattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaaga 323  Q
    |||||| || ||||||||||||| |||||||| ||||||  |   |||| ||||||||||||||||||||||| ||||| ||||||    
T  10544693 taattaatggaagaaattttggggattttggactgtagacgagggattgaaaaattagggttccaattttatagatttggggaaga 10544778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 329
Target Start/End: Original strand, 26397635 - 26397715
Alignment:
Q  248 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||||||| |||||| | | ||||| ||| ||| |||| ||||||||| ||||||||| ||||||||||||||||||    
T  26397635 aagaaattttggggattttgaactctagatgacaaattataaa-ttagggttctaattttatagatttgaggaagaaagagc 26397715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 49524394 - 49524527
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | |  || | ||| ||| ||| ||||    
T  49524394 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactccaggtgacaaattataacatta 49524493  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| |||||||| ||| |||||||||||    
T  49524494 gggttccaaatttatatacttggggaagaaagag 49524527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 35402202 - 35402069
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| ||||| |||||||||||||| ||  ||  ||||  || ||||||||| ||| |||| | | | ||| | ||| ||| ||| ||||    
T  35402202 attagggttttaagtttttttaattggggaagaacattgacatcaattcatggaagaaatttgggggattt-gaactctaggtgacaaattataacatta 35402104  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| |||||||||||| ||||||||||||    
T  35402103 gggttccaaatttatatatttggggaagaaagagc 35402069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 380
Target Start/End: Complemental strand, 230728 - 230650
Alignment:
Q  302 aattttatatatttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcact 380  Q
    ||||||||||| ||| |||||||| ||||||||||||||  |||||||   || ||  |||||||||||| ||||||||    
T  230728 aattttatataattggggaagaaaaagcaaagcattttcagcaaatcagccaaattagtccttggaaattatggtcact 230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Original strand, 42982211 - 42982248
Alignment:
Q  291 attagggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  42982211 attagggttccaaatttatatatttggggaagaaagag 42982248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Complemental strand, 20494182 - 20494146
Alignment:
Q  292 ttagggttccaattttatatatttgaggaagaaagag 328  Q
    |||||||||||| |||||||||||| |||||||||||    
T  20494182 ttagggttccaaatttatatatttggggaagaaagag 20494146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 27385940 - 27385980
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacat 59  Q
    ||||| || |||||||| |||||||||||||||||||||||    
T  27385940 ggacaccaacattcaagtactctcacatcaccattaaacat 27385980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 1e-54; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 17951149 - 17950853
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||  |  ||||||||  |   ||||| | |||||||| ||    
T  17951149 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccaaatgaccacctcccatcattttag 17951050  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  17951049 attcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaa-attagggtttgtaattttttgatttggggaaga 17950951  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  17950950 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 17950853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 35174971 - 35174674
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    |||||| ||||||||| |||||||||||||||||||  | ||||| |||||||||||| |||  |  |||||||| ||    |||| | ||| |||| ||    
T  35174971 cattcaggcactctcatatcaccattaaacatggaggatgaagatgaagcttgactttgatagctctttttgcccatatgatcacctcccattattttag 35174872  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  35174871 attcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaaga 35174772  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  35174771 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattacacattgtaaaattagggttccaattttatatatttggggaagaaa 35174674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 327
Target Start/End: Original strand, 17936042 - 17936339
Alignment:
Q  31 tcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgctttt-gcccttacacccacccctcatcatttcagat 129  Q
    ||||||| ||| |||||||||||||||||  |  || ||||| ||||| |||||| | || || |||| |||| |||  ||||| | ||||||||| |||    
T  17936042 tcaagcattctgacatcaccattaaacataaattttgaagatgaagctcgactttgagaactgttttttgcccatacgtccaccacccatcatttcggat 17936141  T
Q  130 tcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaac 229  Q
    ||||  ||||||||||||||||||    |||||| ||||||| ||||| ||||||||        |||||||||||||| |||| ||| | || || |||    
T  17936142 tcaatctgaacaattttgcttgaattttttttggggattttggatttcagattcaatcaaaacaaattagggtttgaagtttttagaagtaggcaataac 17936241  T
Q  230 gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 327  Q
    |||  || |||||| || |||||||||||||||||||||| ||||||||| | |||| |||||||||||| |||||||||| ||||||||||||||||    
T  17936242 gttgtcattaattaatggaagaaattttgggaattttggattgtagattagagattgaaaaattagggtttcaattttatagatttgaggaagaaaga 17936339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 28 - 325
Target Start/End: Original strand, 34344827 - 34345123
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||| | |||||||||||| |||  |  |||||||| ||   |||||||  ||||||| ||    
T  34344827 cattcaagcactctcacatcaccattaaacatggaggatgaagttgaagcttgactttgatagctctttttgcccatatgaccacccca-atcattttag 34344925  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||| ||  |||||||  |||||||  ||||  || ||||        ||||||||||| |  ||||| | | ||||||||    
T  34344926 attcaatttcaacacttttgcttaaatgaattttgcagattttggttttcatatccaattaaaaaaaattagggtttgcaatttttttattcggggaaga 34345025  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| ||||   |||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||    
T  34345026 acgtgacccttaattattggaagaaaatttgaagattttggagtgtagattacacattgtaaagttagggttccaattttatatattttaggaagaaa 34345123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 4289838 - 4289710
Alignment:
Q  197 tagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagg 296  Q
    ||||||||| |  ||||||| |||||||||||||| |||  ||||||||| |||||| |||||  |||||||||| ||||||||| ||||||||||||||    
T  4289838 tagggtttgcaattttttgatttggggaagaacgtgacccttaattattggaagaaaatttggagattttggagtatagattacacattgtaaaattagg 4289739  T
Q  297 gttccaattttatatatttgaggaagaaa 325  Q
     ||||||||||||||||||| ||||||||    
T  4289738 attccaattttatatatttggggaagaaa 4289710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 376
Target Start/End: Original strand, 31210129 - 31210313
Alignment:
Q  203 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 302  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| |  | ||||| |  |||||||||||||||||||| |||||||||||||| || ||    
T  31210129 ttgaagttttttgaattggggaagaaagttaccactaattattggataatatttttgagattttggagtgtagattacagattgtaaaattaggttttca 31210228  T
Q  303 atttt--------atata---tttgaggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggt 376  Q
    || ||        | |||    |||||| ||||||||||||||||||||||||||||||| |||||  |||||| ||||||||||    
T  31210229 atatttggggaagaaataaccgttgagggagaaagagcaaagcattttctacaaatcaatcaatttagtccttgaaaattttggt 31210313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 33277234 - 33277101
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| |||  |  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| |||||| |    
T  33277234 attagggttttaagttttttgaattggggaagaactttaatatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataaaatca 33277135  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| ||||||||||||| |||||||||||    
T  33277134 gggttccaaatttatatatttga-gaagaaagagc 33277101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 7371586 - 7371453
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  7371586 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 7371487  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| |||||||||||| |||||||||||    
T  7371486 gggttccaaatttatatatttggggaagaaagag 7371453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 327
Target Start/End: Complemental strand, 30640027 - 30639903
Alignment:
Q  203 ttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttcca 302  Q
    |||||| ||||||||||  ||||||||   |||||| ||||||| | ||||||| ||  ||||| ||||||||||| || |||||  ||||| |||||||    
T  30640027 ttgaagttttttgaattatggaagaactggaccacttattattggaggaaatttaggtgattttagagtgtagattgcagattgtgtaattatggttcca 30639928  T
Q  303 attttatatatttgaggaagaaaga 327  Q
    |||||||| | || |||||||||||    
T  30639927 attttatacaattaaggaagaaaga 30639903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 329
Target Start/End: Original strand, 11356803 - 11356922
Alignment:
Q  210 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 309  Q
    |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||    
T  11356803 tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtaacaaattataacattagggttccaaatttat 11356902  T
Q  310 atatttgaggaagaaagagc 329  Q
    ||||||| ||||||||||||    
T  11356903 atatttggggaagaaagagc 11356922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 325
Target Start/End: Complemental strand, 33267419 - 33267342
Alignment:
Q  248 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    ||||||||||||| |||||| | | ||| | ||| ||| ||| ||||||||||||| ||| |||||||| ||||||||    
T  33267419 aagaaattttggggattttgaactctaggtgacaaattataacattagggttccaaatttgtatatttggggaagaaa 33267342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 315
Target Start/End: Complemental strand, 14338061 - 14337985
Alignment:
Q  239 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatattt 315  Q
    ||||| || ||||||||||||| |||||| | | ||  | ||| ||| ||||||||||||||||| |||||||||||    
T  14338061 aattaatggaagaaattttggggattttgaactctatgtgacaaattataaaattagggttccaaatttatatattt 14337985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 1e-48; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 195 - 329
Target Start/End: Original strand, 1344478 - 1344612
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||||| | ||||||||||||    
T  1344478 attagggtttgaagttttttgaattggggaagaacgttaccaccaattattggaagaaattttggagattttggagtgtagattaaagattgtaaaatta 1344577  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    |||||||||||||||||||||  ||||||||||||    
T  1344578 gggttccaattttatatatttagggaagaaagagc 1344612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 28 - 325
Target Start/End: Complemental strand, 42619872 - 42619581
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    ||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||  ||   |||    ||| ||   ||||||| |||||||| ||    
T  42619872 cattcaagcactctcacatcaccattaaacatggaggatgaagatgaagcttgactttggta---gctc---cccatatgaccaccccccatcattttag 42619779  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || |||| |||||||||||  |||||||  |||||||  |||| ||||||||        ||||||||||| |  ||||||| ||||||||||    
T  42619778 attcaatttcaacagttttgcttgaatgaattttgcagattttggttttcagattcaattaaaaaaaattagggtttgcaattttttgatttggggaaga 42619679  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaa 325  Q
    |||| |||  ||||||||| |||||| |||||  |||||||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||    
T  42619678 acgtgacccttaattattggaagaaaatttggagattttggagtgtagattaaacattgtaaaattagggttccaattttatacatttggggaagaaa 42619581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 24497749 - 24497874
Alignment:
Q  200 ggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggtt 299  Q
    ||||||||| |||||||||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  24497749 ggtttgaaggtttttgaattggggaagaacgttatcattgattattggaagaaattttgggaattttggagtgtagattacttattgtaaaattagagtt 24497848  T
Q  300 ccaattttatatatttgaggaagaaa 325  Q
     |||||||||||||||  ||||||||    
T  24497849 tcaattttatatatttagggaagaaa 24497874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 28 - 329
Target Start/End: Complemental strand, 38177224 - 38176923
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| |||||||||||    
T  38177224 cattcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactattttttcccatatttccaccccccatcatttcag 38177125  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || || | |||||||| |||||||||||  |||||||  ||||  |||||||        |||||||||||||| ||||||||||||||||||    
T  38177124 attcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaaga 38177025  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 327  Q
    ||   |||| | || |||| | || ||||||| |||||| ||||||| |||    |||||  ||||||||||||||| ||||| | ||| ||||||||||    
T  38177024 actggaccatttataattggaggatattttggtaattttagagtgtaaattgttgattgtgtaattagggttccaatgttatacaattggggaagaaaga 38176925  T
Q  328 gc 329  Q
    ||    
T  38176924 gc 38176923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 28 - 329
Target Start/End: Complemental strand, 38204448 - 38204147
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| |||||||||||    
T  38204448 cattcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactattttttcccatatttccaccccccatcatttcag 38204349  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || || | |||||||| |||||||||||  |||||||  ||||  |||||||        |||||||||||||| ||||||||||||||||||    
T  38204348 attcaatttcaatagttttgcttcaagaaattttgaggattttggctttcaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaaga 38204249  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaaga 327  Q
    ||   |||| | || |||| | || ||||||| |||||| ||||||| |||    |||||  ||||||||||||||| ||||| | ||| ||||||||||    
T  38204248 actggaccatttataattggaggatattttggtaattttagagtgtaaattgttgattgtgtaattagggttccaatgttatacaattggggaagaaaga 38204149  T
Q  328 gc 329  Q
    ||    
T  38204148 gc 38204147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 19 - 329
Target Start/End: Complemental strand, 18727164 - 18726853
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||||||||||| ||||||||||| |||||||| ||||| |||||| ||||||||||  | |||| ||  ||  |||||||| ||    
T  18727164 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagctttactttcataaccgttttttcctatattcccaccccaca 18727065  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagctttttgaa 217  Q
    ||||||||||||||| || || | | |||||| |||||||||||  |||||||  |||  |||||| |         |||||||||||||| ||||||||    
T  18727064 tcatttcagattcaatttcaatagtcttgcttcaagaaattttgaggattttggctttgagattcactacgaaaaaaattagggtttgaagttttttgaa 18726965  T
Q  218 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttga 317  Q
    |||||| |||||   |||||| ||||||| |  |||||||    ||| | |||||||||||||| |||||  ||||||||||||||||||||| | |||     
T  18726964 ttggggcagaactgaaccacttattattggagaaaattttcatgattatagagtgtagattacagattgtgtaattagggttccaattttatacaattgg 18726865  T
Q  318 ggaagaaagagc 329  Q
    ||||||||||||    
T  18726864 ggaagaaagagc 18726853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 325
Target Start/End: Complemental strand, 35291644 - 35291343
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||||| ||||||||||||||||| |||||||| ||||| || |||||||||||||| || |||| ||| ||  |||||||| ||    
T  35291644 ggacaccaacattcaagcactatcacatcaccattaaacttggagcttgaagatgaaacttgactttcataactgttttttcccatattcccacccc-ca 35291546  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaat 218  Q
    ||||||||||| ||| || || | |||||||| |||||||||||  ||||||||  |||  |||||||         ||||||||||||| ||| |||||    
T  35291545 tcatttcagatccaatttcaatagttttgcttcaagaaattttgaggattttgacattcaaattcaatgcaaaaa-gttagggtttgaagttttgtgaat 35291447  T
Q  219 tggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgag 318  Q
    |||||||||||   |||||| |||| || | ||||||||||  ||||||||||||||||| |   ||||  ||| |||||| |||||||||| | ||| |    
T  35291446 tggggaagaaccggaccacttattactggaggaaattttggtgattttggagtgtagattgc---ttgtgtaatcagggtttcaattttatacaattggg 35291350  T
Q  319 gaagaaa 325  Q
    |||||||    
T  35291349 gaagaaa 35291343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 310
Target Start/End: Original strand, 40330004 - 40330296
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||||||||||||||||||||||| ||||  || ||||| ||||| ||||||||||| |  |||| ||| ||   ||||||| ||    
T  40330004 ggacaccaacattcaagcactctcacatcaccattaaacttggaaattgaagatgaagctcgactttcataactattttttcccatatttccacccccca 40330103  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnta-ttagggtttgaagctttttgaa 217  Q
    |||||||||| |||| || || | |||||||| ||||||||||   |||||||  ||||  |||||||        | ||||||||| ||| || |||||    
T  40330104 tcatttcagaatcaatttcaatagttttgcttcaagaaattttcaagattttggctttcatattcaatacggaaaaaattagggtttcaagtttgttgaa 40330203  T
Q  218 ttggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 310  Q
    |||||||||| |   |||||| ||||||| | |||||||| |  ||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  40330204 ttggggaagagctggaccacttattattggaggaaatttttgtgattttggagtgtagattgcatattgtgtaattagggttccaattttata 40330296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 195 - 327
Target Start/End: Complemental strand, 1343614 - 1343482
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    ||||||||||| || ||||| |||||||||| |||||||||||||| ||||| ||||||||||||  |||||||||||||| ||| | ||| ||||||||    
T  1343614 attagggtttggagttttttaaattggggaaaaacgttaccactaactattggaagaaattttggagattttggagtgtagtttaaagattataaaatta 1343515  T
Q  295 gggttccaattttatatatttgaggaagaaaga 327  Q
    ||||  |||||||||||||||  ||||||||||    
T  1343514 gggtgtcaattttatatatttagggaagaaaga 1343482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 95 - 325
Target Start/End: Original strand, 27350095 - 27350322
Alignment:
Q  95 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 193  Q
    |||||||| |||||||||||| |||||||||  |||||| |  |||| ||||| ||||||||||||||| ||||||   |||| |||||||||           
T  27350095 ttttgcccatacacccacccc-catcatttcttattcaattacaacagttttgtttgaagaaattttggggatttttttattttggattcaataaaaaa- 27350192  T
Q  194 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 293  Q
     | |||||||||| | | ||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||  |||| | ||| |||||||    
T  27350193 -aatagggtttgaggttatttcaattggggatgaacgttac-actaattattgaaagaatttttgggaattttggcgtgtgaattaaagattataaaatt 27350290  T
Q  294 agggttccaattttatatatttgaggaagaaa 325  Q
    ||||||||||||||||| ||||| | ||||||    
T  27350291 agggttccaattttatacatttgggaaagaaa 27350322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 329
Target Start/End: Original strand, 32089411 - 32089725
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||  | |||| ||| ||  |||||||| ||    
T  32089411 ggacaccaacattcaagcactctcacaacaccattaaacttggagcttgaagatgaagcttgactttcataaccgttttttcccatattcccaccccaca 32089510  T
Q  119 tcattt--cag-attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaat-nnnnnnntattagggtttgaagcttttt 214  Q
    ||||||   || |||||| || || | |||||||| |||||||||||  |||||||  |||| |||||| |         |||||||||||||| |||||    
T  32089511 tcattttgaagtattcaatttcaatagttttgcttcaagaaattttgaggattttggctttcagattcactacgaaaaaaattagggtttgaagtttttt 32089610  T
Q  215 gaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatt 314  Q
    ||||||||| |||||   ||| || ||||||| |  |||||||    ||| | ||||||||||| || |||||  ||||||||||||||||||||| | |    
T  32089611 gaattggggcagaactgaacctcttattattggagtaaattttcatgattatagagtgtagattgcagattgtgtaattagggttccaattttatacaat 32089710  T
Q  315 tgaggaagaaagagc 329  Q
    || ||||||||||||    
T  32089711 tggggaagaaagagc 32089725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 28 - 310
Target Start/End: Complemental strand, 32836467 - 32836186
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcag 127  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||| ||||| ||||||||||| || |||| | | ||  |||||||| |||||||||||    
T  32836467 cattcaagcactctcacaacaccattaaacttggagctcgaagatgaagctcgactttcataactgttttttcacatattcccacccc-catcatttcag 32836369  T
Q  128 attcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaaga 227  Q
    |||||| || || | |||||||| || |  |||||  |||||||  |||   |||||||        |||||||||||||| ||||||||||||||||||    
T  32836368 attcaatttcaatagttttgcttcaaaattttttgaggattttggcttttaaattcaatacgaaaaaattagggtttgaagttttttgaattggggaaga 32836269  T
Q  228 acgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 310  Q
    || | |||| | ||  ||| | || |||||||  |||||  |||||| ||| || |||||  ||||||||||||||| |||||    
T  32836268 acttgaccatttatatttggaggatattttggtgattttatagtgtaaattgcagattgtgtaattagggttccaatgttata 32836186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 172
Target Start/End: Complemental strand, 43317329 - 43317176
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| || ||||  || ||  |||||||| ||    
T  43317329 ggacaccaacattcaagcactctcacatcaccattaaacttggagtttgaagatgaagctcgactttcataactgtttttttccatattcccacccccca 43317230  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga 172  Q
    ||||||||||| ||| || |  | |||||||| |||||||||||  ||||||||    
T  43317229 tcatttcagatccaatttcactagttttgcttcaagaaattttgaggattttga 43317176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 95 - 329
Target Start/End: Original strand, 6116465 - 6116700
Alignment:
Q  95 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnnt 194  Q
    |||||||  |||||||| | | ||||||||| ||||||| |||||||||||||  |||||||||||||| ||||||| |||||  |||||||            
T  6116465 ttttgcctatacacccatcacccatcatttcggattcaatttgaacaattttgaatgaagaaattttggggattttggatttcatattcaatcaaaacaa 6116564  T
Q  195 a--ttagggtttgaagctttttgaattggggaagaac--gttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaa 290  Q
    |  ||||||||||||| |||| ||||  ||||||||   |||     |||||| || ||||||||||||| ||||| || ||||||||| | |||| |||    
T  6116565 aaattagggtttgaagtttttagaatcagggaagaaatggttgt---taattaatggaagaaattttggggatttttgactgtagattagagattgaaaa 6116661  T
Q  291 attagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| |||||||||| ||||| ||||||||||||    
T  6116662 attagggtttcaattttatagatttggggaagaaagagc 6116700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 18341593 - 18341745
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctca 118  Q
    ||||| || |||||||||| ||| |||||||| |||||||| ||| || | ||| |||||  | ||| | || || |||||||| |||  ||||| | ||    
T  18341593 ggacaccaacattcaagcattcttacatcaccgttaaacatagagtttgaggatgaagctcaagtttgagaactgtttttgcccatacgaccaccaccca 18341692  T
Q  119 tcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttg 171  Q
    |||||||||||||||  |||||||||||| ||||||||||||||| |||||||    
T  18341693 tcatttcagattcaatctgaacaattttgattgaagaaattttggggattttg 18341745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 18623899 - 18623765
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||  ||| ||| ||||    
T  18623899 attagggttttaagttttttgaattggggaagaactttggcatcaattcatgtaagaaattttggggattttgaactctaggtgacgaattataacatta 18623800  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| |||||||||||| ||||||||||||    
T  18623799 gggttccaaatttatatatttggggaagaaagagc 18623765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 32134690 - 32134556
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  32134690 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaatttgggggattttgaactataggtgacaaattataacatta 32134591  T
Q  295 gggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| ||||||||||||  |||||||||||    
T  32134590 gggttccaaatttatatatttgtagaagaaagagc 32134556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 47 - 310
Target Start/End: Original strand, 35400226 - 35400489
Alignment:
Q  47 caccattaaacatggagcttaaagataaagcttgactttcataattgcttttgcccttacacccacccctcatcatttcagattcaaattgaacaatttt 146  Q
    ||||||||||| ||||| || ||||| || ||||||||||| ||    |||| ||| ||  |||||||| ||||||||||||||||| || || | ||||    
T  35400226 caccattaaacttggagtttgaagatgaaacttgactttcaaaacctttttttcccatattcccaccccccatcatttcagattcaatttcaatagtttt 35400325  T
Q  147 gcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaagctttttgaattggggaagaacgttaccactaattattg 246  Q
    |||| |||||||||||  |||||||  |||| || ||| |        | |  ||||||||| ||||| |||||||  ||||    |||||| |||||||    
T  35400326 gcttcaagaaattttgaggattttggctttcagactcactacgaaaaaaattaggtttgaagttttttaaattgggacagaattggaccacttattattg 35400425  T
Q  247 aaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttata 310  Q
     | ||||||||   |||| | ||||||||||| ||||||||  |||||||||||||||||||||    
T  35400426 gaggaaattttcataattatagagtgtagattgcatattgtgtaattagggttccaattttata 35400489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 402
Target Start/End: Original strand, 24497885 - 24497969
Alignment:
Q  318 ggaagaaagagcaaagcattttctacaaatcaattaatttgatccttggaaattttggtcactgtcgaccacattggtctctgct 402  Q
    ||||||||||||||| |||||| | ||||||||| |||||| |||||| |||||||| ||||| ||| ||| ||| |||||||||    
T  24497885 ggaagaaagagcaaaacattttatgcaaatcaatcaatttggtccttgtaaattttgatcactatcggccaaattagtctctgct 24497969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 34328466 - 34328600
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttggga-attttggagtgtagattacatattgtaaaatt 293  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || |||||||||||||  |||||| | | |||   ||| ||| ||| |||    
T  34328466 attagggttttaagttttttgaattggggaagaacattgacatcaattcatggaagaaattttgggggattttgaactctaggcgacaaattataatatt 34328565  T
Q  294 agggttccaattttatatatttgaggaagaaagag 328  Q
    |||||||||| |||||||||||| |||||||||||    
T  34328566 agggttccaaatttatatatttggggaagaaagag 34328600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 12738337 - 12738470
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  12738337 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 12738436  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| ||||||| |||  |||||||||||    
T  12738437 gggttccaaatttatatgtttagggaagaaagag 12738470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 12801160 - 12801293
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  12801160 attagggttttaagttttttgaattggggaagaacattgacatcaattcatgtaagaaatttgggggattttgaactctaggtaacaaattataacatta 12801259  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||| ||||||| |||  |||||||||||    
T  12801260 gggttccaaatttatatgtttagggaagaaagag 12801293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 27077123 - 27077256
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||| ||||||| |||||||||||||||||||||||  ||  ||||| || |||||||||| |  |||||| | | |   | ||| ||| ||||||||    
T  27077123 attaggttttgaagttttttgaattggggaagaacgttgtcatcaattaatggaagaaattttagagattttgaactctcagtgacaaattataaaatta 27077222  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    |||||||||| ||||  ||||| |||||||||||    
T  27077223 gggttccaatgttatggatttggggaagaaagag 27077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 33257426 - 33257559
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||||||| |||||||||||||| |||||   |||||| ||||||| | ||||||||    ||| | ||||||| ||| || |||||  ||| |    
T  33257426 attagggtttgaagttttttgaattggggcagaactgaaccacttattattggaggaaattttcatgattatagagtgtatattgcagattgtgtaatca 33257525  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||| |||||||||| | ||| |||||||||||    
T  33257526 gggttacaattttatacaattggggaagaaagag 33257559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 316
Target Start/End: Complemental strand, 41494285 - 41494167
Alignment:
Q  198 agggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattaggg 297  Q
    ||||||| ||| |||||||||||||||||||| ||  ||  ||||  || ||||||||||||| |||||| | | ||| | ||| ||| ||| ||| |||    
T  41494285 agggttttaagttttttgaattggggaagaactttgtcatcaattcatggaagaaattttggggattttgaactctaggtgacaaattataacattcggg 41494186  T
Q  298 ttccaattttatatatttg 316  Q
    |||||| ||||||||||||    
T  41494185 ttccaaatttatatatttg 41494167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 329
Target Start/End: Complemental strand, 30464344 - 30464263
Alignment:
Q  248 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||||||||| ||||||||||||    
T  30464344 aagaaatttgggggattttgaactctaggtaacaaattataacattagggttccaaatttatatatttggggaagaaagagc 30464263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 328
Target Start/End: Complemental strand, 28035852 - 28035772
Alignment:
Q  248 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 328  Q
    |||||||||||| ||||||  | |||| |||| | |||| ||| ||| |||| ||||||||||||| ||||||||||||||    
T  28035852 aagaaattttggaaattttaaactgtaaattagagattgaaaagttaaggtttcaattttatatatctgaggaagaaagag 28035772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 33257262 - 33257309
Alignment:
Q  19 ggacatcatcattcaagcactctcacatcaccattaaacatggagctt 66  Q
    ||||| || |||||||||||||||||| ||||||||||| ||||||||    
T  33257262 ggacaccaacattcaagcactctcacaacaccattaaacttggagctt 33257309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 28821770 - 28821860
Alignment:
Q  239 aattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||| || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||||||| ||| |||||||||||| ||||||||||||    
T  28821770 aattaatggaagaaatttgggggattttgaactctaggtgacaaattataacattagggtttcaaatttatatatttggggaagaaagagc 28821860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 325
Target Start/End: Complemental strand, 29620529 - 29620495
Alignment:
Q  291 attagggttccaattttatatatttgaggaagaaa 325  Q
    ||||||||||||| |||||||||||||||||||||    
T  29620529 attagggttccaaatttatatatttgaggaagaaa 29620495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 8541036 - 8541072
Alignment:
Q  291 attagggttccaattttatatatttgaggaagaaaga 327  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  8541036 attagggttccaaatttatatatttggggaagaaaga 8541072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 328
Target Start/End: Original strand, 19998149 - 19998229
Alignment:
Q  248 aagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagag 328  Q
    ||||||||||| |||||||  | | ||| | ||| ||| ||||||||||||| | |||||||| ||||| |||||||||||    
T  19998149 aagaaattttgagaattttaaactctaggtgacaaattataaaattagggtttccattttatagatttggggaagaaagag 19998229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 27076966 - 27077010
Alignment:
Q  28 cattcaagcactctcacatcaccattaaacatggagcttaaagat 72  Q
    |||||||| |||||||||||||||||||| || |||||| |||||    
T  27076966 cattcaagtactctcacatcaccattaaaaatagagcttgaagat 27077010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 95 - 323
Target Start/End: Original strand, 37856 - 38082
Alignment:
Q  95 ttttgcccttacacccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttga-atttcggattcaatnnnnnnn 193  Q
    |||||||| ||||||||||| |||||||||||||||||| |  |||| ||||| |||||| |||||||| ||||||   ||||||||||||||           
T  37856 ttttgcccatacacccaccc-tcatcatttcagattcaattacaacagttttgtttgaaggaattttggggattttttgatttcggattcaatcaaaaa- 37953  T
Q  194 tattagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatt 293  Q
     |||||||||||| | | ||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||   |||||||||||    
T  37954 -attagggtttgaggttatttcaattggggaagaacgttaccactaattattggaagaatttttgggaattttggagtgtggattaatgattgtaaaatt 38052  T
Q  294 agggttccaattttatatatttgaggaaga 323  Q
    ||||||||||||||||| ||||| ||||||    
T  38053 agggttccaattttatacatttggggaaga 38082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 108 - 329
Target Start/End: Complemental strand, 57890 - 57669
Alignment:
Q  108 cccacccctcatcatttcagattcaaattgaacaattttgcttgaagaaattttggtgattttgaatttcggattcaatnnnnnnntattagggtttgaa 207  Q
    |||||||||||| ||||| ||||||| || || | |||||||  ||||||||||   ||||||| ||||| ||||||||        || ||||||||||    
T  57890 cccacccctcatgatttcggattcaatttcaatagttttgctgaaagaaattttttggattttggatttcagattcaataaaaaaaaat-agggtttgaa 57792  T
Q  208 gctttttgaattgg-ggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattt 306  Q
    | |||||||||| | ||||||| ||||||||| ||||||  ||||||||||||  |||||||||||||||||||| || ||| ||| |||||| ||||||    
T  57791 gttttttgaattagaggaagaatgttaccacttattattcgaagaaattttggttattttggagtgtagattacagatagtataatcagggtttcaattt 57692  T
Q  307 tatatatttgaggaagaaagagc 329  Q
    |||||||||| ||||||||||||    
T  57691 tatatatttggggaagaaagagc 57669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 2643 - 2710
Alignment:
Q  262 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||| ||||||||||||    
T  2643 attttggagtgtagattacatatagtataattagagttccagttttatatatttggggaagaaagagc 2710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 2423 - 2356
Alignment:
Q  262 attttggagtgtagattacatattgtaaaattagggttccaattttatatatttgaggaagaaagagc 329  Q
    |||||||||||||||||||  || ||| ||| ||||||||||||||||||||||| ||||||||||||    
T  2423 attttggagtgtagattactgatagtataatgagggttccaattttatatatttggggaagaaagagc 2356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 329
Target Start/End: Complemental strand, 4574 - 4446
Alignment:
Q  200 ggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggtt 299  Q
    ||||||||| |||| | |||| |||||||||||  ||  ||||| || ||||| ||||||  |||||  | | ||||| ||| ||||||||||||| |||    
T  4574 ggtttgaagtttttagcattgaggaagaacgttgtcatcaattaatggaagaa-ttttggagattttaaactctagatgacaaattgtaaaattagagtt 4476  T
Q  300 ccaattttatatatttgaggaagaaagagc 329  Q
    ||||||||||| ||||||| ||||||||||    
T  4475 ccaattttatagatttgagaaagaaagagc 4446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 328
Target Start/End: Original strand, 9533 - 9666
Alignment:
Q  195 attagggtttgaagctttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaatta 294  Q
    |||||||||| ||| |||||||||||||||| ||| ||  ||  ||||  || ||||||||| ||| |||||| | | ||| | ||| ||| ||| ||||    
T  9533 attagggttttaagttttttgaattggggaaaaacattgacatcaattcatggaagaaatttgggggattttgaactctaggtgacaaattataacatta 9632  T
Q  295 gggttccaattttatatatttgaggaagaaagag 328  Q
    ||||| ||| |||||||||||| |||||||||||    
T  9633 gggtttcaaatttatatatttggggaagaaagag 9666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 329
Target Start/End: Original strand, 1164 - 1283
Alignment:
Q  210 tttttgaattggggaagaacgttaccactaattattgaaagaaattttgggaattttggagtgtagattacatattgtaaaattagggttccaattttat 309  Q
    |||||||||||||||||||| ||  ||  ||||  || ||||||||| ||  |||||| | | ||| | ||| ||| ||| ||||||||||||| |||||    
T  1164 tttttgaattggggaagaacattgacatcaattcatggaagaaatttgggagattttgaactctaggtaacaaattataacattagggttccaaatttat 1263  T
Q  310 atatttgaggaagaaagagc 329  Q
    ||||||| ||||||||||||    
T  1264 atatttggggaagaaagagc 1283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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