View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0495_low_20 (Length: 285)

Name: NF0495_low_20
Description: NF0495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0495_low_20
NF0495_low_20
[»] chr6 (9 HSPs)
chr6 (32-219)||(17958599-17958786)
chr6 (32-217)||(634317-634502)
chr6 (32-217)||(6377731-6377916)
chr6 (45-219)||(34841056-34841230)
chr6 (45-219)||(8221751-8221925)
chr6 (45-219)||(24916931-24917105)
chr6 (45-219)||(18641834-18642008)
chr6 (32-193)||(29952327-29952489)
chr6 (45-207)||(24114707-24114869)
[»] chr4 (14 HSPs)
chr4 (32-219)||(2212584-2212771)
chr4 (32-219)||(46914778-46914965)
chr4 (32-219)||(53181732-53181919)
chr4 (45-219)||(3530577-3530751)
chr4 (45-219)||(3615566-3615740)
chr4 (45-219)||(8994333-8994507)
chr4 (45-219)||(13113111-13113285)
chr4 (32-201)||(36658099-36658268)
chr4 (45-219)||(16172169-16172343)
chr4 (46-219)||(33606632-33606805)
chr4 (32-219)||(34434838-34435025)
chr4 (45-219)||(28900568-28900742)
chr4 (45-219)||(28446824-28446998)
chr4 (45-219)||(36564743-36564916)
[»] chr3 (21 HSPs)
chr3 (32-219)||(17469061-17469248)
chr3 (32-219)||(25788009-25788196)
chr3 (32-217)||(25829966-25830151)
chr3 (32-219)||(42598664-42598851)
chr3 (32-219)||(47146918-47147105)
chr3 (32-219)||(33935822-33936009)
chr3 (45-219)||(6045650-6045824)
chr3 (45-219)||(30415778-30415952)
chr3 (45-219)||(42563557-42563731)
chr3 (45-219)||(10424974-10425148)
chr3 (32-219)||(51429519-51429694)
chr3 (45-219)||(26157417-26157591)
chr3 (45-219)||(43475038-43475212)
chr3 (46-219)||(33188387-33188560)
chr3 (32-219)||(50019643-50019818)
chr3 (41-217)||(30689139-30689315)
chr3 (45-219)||(4874420-4874594)
chr3 (86-219)||(4852727-4852860)
chr3 (32-210)||(21227770-21227948)
chr3 (169-219)||(33751209-33751259)
chr3 (109-210)||(21229898-21229999)
[»] chr2 (10 HSPs)
chr2 (32-219)||(9073221-9073408)
chr2 (32-219)||(30819918-30820105)
chr2 (32-217)||(12857526-12857711)
chr2 (32-219)||(8854644-8854831)
chr2 (41-219)||(5145682-5145860)
chr2 (45-219)||(7585851-7586025)
chr2 (32-217)||(31185544-31185729)
chr2 (41-219)||(31205267-31205446)
chr2 (32-219)||(4278714-4278901)
chr2 (76-158)||(2779425-2779507)
[»] chr1 (15 HSPs)
chr1 (32-219)||(31470833-31471020)
chr1 (32-219)||(45241685-45241872)
chr1 (32-219)||(17785890-17786077)
chr1 (45-219)||(2475441-2475615)
chr1 (45-219)||(48385497-48385671)
chr1 (45-219)||(47297866-47298040)
chr1 (45-219)||(17676628-17676802)
chr1 (45-219)||(33166834-33167008)
chr1 (45-219)||(38837005-38837179)
chr1 (32-219)||(51522887-51523074)
chr1 (45-198)||(8470899-8471051)
chr1 (53-206)||(18318078-18318231)
chr1 (45-219)||(48406975-48407137)
chr1 (147-219)||(10265804-10265876)
chr1 (137-193)||(45978665-45978721)
[»] chr8 (14 HSPs)
chr8 (33-219)||(35101042-35101228)
chr8 (32-219)||(13816684-13816871)
chr8 (32-219)||(5213430-5213617)
chr8 (33-200)||(26749200-26749367)
chr8 (45-219)||(1955601-1955775)
chr8 (45-219)||(15056194-15056368)
chr8 (45-219)||(38205538-38205712)
chr8 (45-219)||(30529944-30530118)
chr8 (41-219)||(17744217-17744395)
chr8 (32-114)||(5735767-5735849)
chr8 (148-219)||(1633962-1634033)
chr8 (155-209)||(27359720-27359774)
chr8 (155-209)||(27369077-27369131)
chr8 (36-74)||(27392271-27392309)
[»] chr7 (7 HSPs)
chr7 (32-217)||(22193863-22194048)
chr7 (45-219)||(36521076-36521250)
chr7 (47-219)||(22659494-22659666)
chr7 (45-219)||(32127561-32127735)
chr7 (45-219)||(26814712-26814886)
chr7 (45-135)||(40301220-40301310)
chr7 (41-148)||(1940162-1940268)
[»] scaffold1240 (1 HSPs)
scaffold1240 (32-219)||(17-204)
[»] chr5 (9 HSPs)
chr5 (32-193)||(31012330-31012491)
chr5 (32-219)||(4579654-4579829)
chr5 (45-219)||(32973672-32973846)
chr5 (45-219)||(27945201-27945375)
chr5 (45-219)||(40891371-40891545)
chr5 (45-219)||(30646179-30646353)
chr5 (45-219)||(29616839-29617013)
chr5 (147-219)||(34710648-34710720)
chr5 (32-79)||(21365263-21365310)
[»] scaffold0004 (1 HSPs)
scaffold0004 (45-219)||(105423-105597)
[»] scaffold0021 (1 HSPs)
scaffold0021 (45-205)||(110521-110681)
[»] scaffold0007 (1 HSPs)
scaffold0007 (76-210)||(166670-166804)
[»] scaffold1454 (1 HSPs)
scaffold1454 (45-76)||(1-32)
[»] scaffold0658 (1 HSPs)
scaffold0658 (155-210)||(6549-6604)


Alignment Details
Target: chr6 (Bit Score: 180; Significance: 3e-97; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 17958599 - 17958786
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17958599 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 17958698  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17958699 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 17958786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 634502 - 634317
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  634502 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 634403  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgat 217  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  634402 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgat 634317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 6377731 - 6377916
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6377731 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 6377830  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgat 217  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6377831 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgat 6377916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 34841230 - 34841056
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  34841230 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 34841131  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  34841130 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 34841056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 8221925 - 8221751
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||| |||||||||||||| ||||||||    
T  8221925 catattggggtaaaattgctgagtattgtaatgagaattgctcattcgattctccgcgcgatgtagttgcatgccgcaaccgttttaattatatgagcaa 8221826  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| |||||||||||||  ||||||||| | | |||||||||||||||||||| ||||||||    
T  8221825 attaataaataaatgggttggtgcttatgatggcgctaagcattttcaaggaagcggttggtcggaagatgatgt 8221751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 24916931 - 24917105
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||| || ||| || |||| |||||||||| ||||||||| ||||||||    
T  24916931 catattggggtaaaattgctgagtattgcaatgagcattgctcattcgatcctccgcgtgatataattgcttgccgaaaccattttaattatatgagcaa 24917030  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  24917031 agtaataaataaatggattggtgcttatgaaagcgctaaacgtttgcaaggaagcggttggtcggaagatgatgt 24917105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 18642008 - 18641834
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| || ||| || |||| |||||||||| ||||||||| ||||||||    
T  18642008 catattggggtaaaattgctgagtattgtaatgagcattgctcattcgatcctccgcgtgatgtaattgcttgccgaaaccattttaattatatgagcaa 18641909  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| ||| ||||||||    
T  18641908 agtaataaataaatggattggtgcttatgaaatcgctaagcgtttgcaaagaagcggttggttggaagatgatgt 18641834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 29952327 - 29952489
Alignment:
Q  32 cagagaggagaaacatatt-ggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttt 130  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||  ||| |||||||||||||||||  |||||||||||||||    
T  29952327 cagagaggagaaacatattaggggtaaatttgctgagtattgtaatgaatattgctcatttaattatccccgcgatctagttgtatgccgaaaccgtttt 29952426  T
Q  131 aattaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaa 193  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||| |  ||||||| |||||    
T  29952427 aattatatgagcaaagtaataaataaatggattggtgcttatgaaaacattaagcgtttgcaa 29952489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 207
Target Start/End: Complemental strand, 24114869 - 24114707
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | | |||| || |||| |||| ||||||||||||||| ||||||||    
T  24114869 catattggggtaaaattgctgagtattgtaatgagcattactcattcgattctgcgctcgatgtaattgcatgccaaaaccgttttaattatatgagcaa 24114770  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtc 207  Q
    ||||   |||||||||||||| ||||||||| | ||||| ||| |||||||||| | ||||||    
T  24114769 aataccgaataaatggattggcgcttatgaaggtgctaaacgtttgcaaggaagtgcttggtc 24114707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 180; Significance: 3e-97; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 2212584 - 2212771
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2212584 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 2212683  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2212684 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 2212771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 46914778 - 46914965
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  46914778 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaactgtttta 46914877  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46914878 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 46914965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 53181732 - 53181919
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53181732 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 53181831  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  53181832 attatatgagcaaaataataaataaatggattggtgcttatgaaagtgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 53181919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 3530577 - 3530751
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  3530577 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 3530676  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  3530677 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 3530751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 3615566 - 3615740
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  3615566 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 3615665  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  3615666 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 3615740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 8994507 - 8994333
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  8994507 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 8994408  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  8994407 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 8994333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 13113285 - 13113111
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  13113285 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 13113186  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  13113185 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 13113111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 32 - 201
Target Start/End: Complemental strand, 36658268 - 36658099
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||||||    
T  36658268 cagagaggaaaaacatattggggtaaaattgctgagtattgtaatgagtgttgctcatttgattctccccgggatctagttgcatgcagaaaccgtttta 36658169  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcgg 201  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  36658168 attatatgagcaaagtaataaataaatggattggtgcttatgaaagcgttaagcgtttgcaaggaagcgg 36658099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 16172169 - 16172343
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||||||||| | |||| | ||||||||    
T  16172169 catattggggtaaaattgctgagtattgtaatgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccggtataataatatgagcaa 16172268  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||    
T  16172269 attaataaataaatgggttggtgcttatgatggcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 16172343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 33606805 - 33606632
Alignment:
Q  46 atattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaaa 145  Q
    ||||||||||||||||| |||||||||||||||  ||| |||||||||| |||| || ||| || |||| |||||||| | ||||||||| |||||||||    
T  33606805 atattggggtaaaattgttgagtattgtaatgaacattactcattcgatcctccgcgtgatgtaattgcttgccgaaatcattttaattatatgagcaaa 33606706  T
Q  146 ataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  33606705 gtaataaataaatggattggtgcttatgaaagcgctaagcgtttgcaaggaagcggttggtcggaagatgatgt 33606632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 34434838 - 34435025
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||||||| |||||  ||||||| |||| || ||| || |||| ||||||||||||||||    
T  34434838 cagacaggtgaagcatattggggtaaaattgctgagtattgtaatgagcattgcaaattcgatcctccgcgtgatgtaattgcatgccgaaaccgtttta 34434937  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| ||||||||| |||||||||||||||||| || ||||||||||||||||| | |||||||||||||||||| ||| ||||||||    
T  34434938 attatatgagcaaagtaataaataaatggattgatgtttatgaaagcgctaagcatttgcaaggaagcggttggttggaagatgatgt 34435025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 28900742 - 28900568
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||  | ||| ||||||| |||||||||| ||||||||| ||||||||    
T  28900742 catattggggtaaaattgttgagtattgtaatgagcattgctcattcgattctccgtgtgatgtagttgcatgccgaaaccattttaattatatgagcaa 28900643  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | ||||||||||||   |||||||||||||  ||||||||||| |||||||||||||||||||||| ||||||||    
T  28900642 attaataaataaatttgttggtgcttatgatggcgctaagcgtttgcaaggaagcggttggtcggaagatgatgt 28900568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 28446998 - 28446824
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| |||| || | | || |||| ||| |||||||||||||||| ||||||||    
T  28446998 catattggggtaaaattgttgagtattgtaatgagcattgctcattcgatcctccacgtggtgtaattgcatgcagaaaccgttttaattatatgagcaa 28446899  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |  ||||||||||||  ||||||||| |||||||| || |||||||||| ||||||||||| | ||||||    
T  28446898 aatactgtataaatggattgacgcttatgaaggcgctaagagtttgcaaggaagtggttggtcggaggctgatgt 28446824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 36564743 - 36564916
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||||||||||||| ||| |||||||||||  ||| |||||| ||| ||||||| |||  |  ||| |||  ||| | ||  || || |||| |||    
T  36564743 catattggggtaaaattgttgattattgtaatgatcatt-ctcatttgatcctccccgtgatgcatctgcgtgcaaaaatcattacaactacatgaacaa 36564841  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| | |||||||||||||| |||||||| |||||||| |||||||||  |||||| ||||||||  |||||||    
T  36564842 aatacttaataaatggattggcgcttatgatagcgctaaacgtatgcaacaaagcgggtggtcggagaatgatgt 36564916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 180; Significance: 3e-97; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 17469248 - 17469061
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17469248 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 17469149  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17469148 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 17469061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 25788009 - 25788196
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25788009 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 25788108  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25788109 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 25788196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 25829966 - 25830151
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25829966 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 25830065  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgat 217  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25830066 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgat 25830151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 42598664 - 42598851
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42598664 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgctgaaaccgtttta 42598763  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42598764 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 42598851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 47147105 - 47146918
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47147105 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtatagctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 47147006  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47147005 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 47146918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 33936009 - 33935822
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33936009 cagagaggagaaacatattagggtaaaattgttgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcatgccgaaaccgtttta 33935910  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  33935909 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtttgcaaggaagcggttggtcggaagatgatgt 33935822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 6045650 - 6045824
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  6045650 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 6045749  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  6045750 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 6045824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 30415778 - 30415952
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  30415778 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 30415877  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  30415878 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 30415952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 42563731 - 42563557
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  42563731 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 42563632  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  42563631 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 42563557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 10424974 - 10425148
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  10424974 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 10425073  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||    
T  10425074 attaataaataaatgggttggtgcttatgatagcgctaagcatatgcaaggaagcggttggtcggaagatgatgt 10425148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 51429694 - 51429519
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    |||||||||||||||||||||||||||||||||||||||||            ||||||||||||||| |||||||||||||||||||||||||||||||    
T  51429694 cagagaggagaaacatattggggtaaaattgctgagtattg------------ctcattcgattctccacgcgatctagttgcctgccgaaaccgtttta 51429607  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  51429606 attatatgaacaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaaaatgatgt 51429519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 26157417 - 26157591
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||| || ||| || |||| |||||||||||||||||||| ||||||||    
T  26157417 catattggggtaaaattgctgagtattgcaatgagcattgctcattcgatcctccgcgtgatataattgcttgccgaaaccgttttaattatatgagcaa 26157516  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  26157517 agtaataaataaatggattggtgcttatgaaagtgctaagcgtctgcaaggaagcggttggtcggaagatgatgt 26157591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 43475212 - 43475038
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||    
T  43475212 catattggggtaaaattgctgagtattgtaatgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgagcaa 43475113  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| |||||||||||||  || |||||||| ||||||||||||||||||||||  |||||||    
T  43475112 attaataaataaatgggttggtgcttatgatggcactaagcgtttgcaaggaagcggttggtcggaaaatgatgt 43475038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 33188387 - 33188560
Alignment:
Q  46 atattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaaa 145  Q
    |||||||||||||||||||||||||||||||||  |||||| |||||||||||| ||||||  |||||| |||||||||||||||||||| |||||||||    
T  33188387 atattggggtaaaattgctgagtattgtaatgaacattgctaattcgattctccgcgcgatgcagttgcatgccgaaaccgttttaattatatgagcaaa 33188486  T
Q  146 ataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
     |||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||| ||||||||    
T  33188487 ttaataaataaatgggttggtgcttatgatggcgctaagcgtttgcaaggaagcggttggtcggaagatgatgt 33188560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 50019818 - 50019643
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||| |||||||            |||||||||||||||||||||||||||||| ||||||||||||||||    
T  50019818 cagagaggagaaacatattggggtaaaattgctaagtattg------------ctcattcgattctccccgcgatctagttgcatgccgaaaccgtttta 50019731  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  50019730 attatatgaacaaagtaataaataaatggattggtgcttatgaaagcgctaagcgtttgcaaggaagcggttggtctgaagatgatgt 50019643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 41 - 217
Target Start/End: Original strand, 30689139 - 30689315
Alignment:
Q  41 gaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatga 140  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||||||| |||||||| || ||||||||||| |||||||| | ||||||||| || |    
T  30689139 gaaatatattggggtgaaattgctgagtattgtaatgagtatggctcatttgattctccgcgggatctagttgcatgccgaaatcattttaattatataa 30689238  T
Q  141 gcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgat 217  Q
    ||||| ||||||||||||||||||||||||||||   |||||||||| |||||||||| ||||||||||| ||||||    
T  30689239 gcaaagtaataaataaatggattggtgcttatgatgccgctaagcgtttgcaaggaagtggttggtcggaagatgat 30689315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 4874420 - 4874594
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||| |||||||| |||||||||||||||| || |||||||||||||||| |||||   |||||| |||||||||||||||||||| ||||||||    
T  4874420 catattgggttaaaattgttgagtattgtaatgagcatcgctcattcgattctccgcgcgactcagttgcatgccgaaaccgttttaattatatgagcaa 4874519  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| |||||||||||||  | ||||||||| |||||||||||||||||||| | ||||||||    
T  4874520 attaataaataaatgggttggtgcttatgatggtgctaagcgtttgcaaggaagcggttggtcgaaagatgatgt 4874594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 86 - 219
Target Start/End: Original strand, 4852727 - 4852860
Alignment:
Q  86 tcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagc 185  Q
    |||||||||||||| |||||   || ||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||  | |||||||    
T  4852727 tcattcgattctccgcgcgactcaggtgcatgccgaaaccgttttaattatatgagcaaattaataaataaatgggttggtgcttatgatggtgctaagc 4852826  T
Q  186 gtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    || |||||||||||||||||||| | ||||||||    
T  4852827 gtttgcaaggaagcggttggtcgaaagatgatgt 4852860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 210
Target Start/End: Complemental strand, 21227948 - 21227770
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    |||| ||| |||||||||||||||| ||||| ||| |||||||||||| |||||||||| ||| |||| | ||||  |||||| || |||||||||| ||    
T  21227948 cagaaaggtgaaacatattggggtagaattgttgattattgtaatgagaattgctcatttgatcctccgcacgatggagttgcatgtcgaaaccgttata 21227849  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcgga 210  Q
    |||| |||| ||||||| ||  |||||||||||| |||||||| |||  ||| ||| | ||||||||||||||||||||    
T  21227848 attatatgaacaaaatactaggtaaatggattggcgcttatgatagcattaatcgttttcaaggaagcggttggtcgga 21227770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 33751259 - 33751209
Alignment:
Q  169 ttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  33751259 ttatgaaagcgctaagcgtttgcaaggaagcggttggtcagaagatgatgt 33751209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 210
Target Start/End: Original strand, 21229898 - 21229999
Alignment:
Q  109 agttgcctgccgaaaccgttttaattaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcg 208  Q
    |||||| || |||||| ||| |||||| |||| ||||||| |   |||||||||||| |||||||| || |||| || | |||||| |||| ||||||||    
T  21229898 agttgcatgtcgaaactgttataattatatgaacaaaatactgggtaaatggattggcgcttatgatagtgctatgcatttgcaagcaagcagttggtcg 21229997  T
Q  209 ga 210  Q
    ||    
T  21229998 ga 21229999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 180; Significance: 3e-97; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 9073221 - 9073408
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9073221 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 9073320  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9073321 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 9073408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 30819918 - 30820105
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30819918 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 30820017  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30820018 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 30820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 12857711 - 12857526
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12857711 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 12857612  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgat 217  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12857611 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgat 12857526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 8854831 - 8854644
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8854831 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 8854732  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8854731 attatatgagtaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 8854644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 5145682 - 5145860
Alignment:
Q  41 gaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatga 140  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||| || ||| || |||| |||||||||||||||||||| ||||    
T  5145682 gaaacatattggggtaaaattgctgagtattgtaatgagcattgctcatttgatcctccgcgtgatgtaattgcttgccgaaaccgttttaattatatga 5145781  T
Q  141 gcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  5145782 gcaaagtaataaataaatggattggtgcttatgaaagcgctaagcgtttgcaaggaagcggttggtcggaagatgatgt 5145860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 7585851 - 7586025
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  7585851 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 7585950  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  7585951 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 7586025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 32 - 217
Target Start/End: Original strand, 31185544 - 31185729
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||| || |||||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||| || ||||||||||| |||| |||||||||||    
T  31185544 cagaggggtgaaacatattggggtaaaattgatgagtattgtattgagtatggctcatttgattctccgcgggatctagttgcatgccaaaaccgtttta 31185643  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgat 217  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||   |||||||||| |||||||||||||||||||||| ||||||    
T  31185644 attatatgagcaaagtaataaataaatggattagtgcttatgatgccgctaagcgtttgcaaggaagcggttggtcggaagatgat 31185729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 31205267 - 31205446
Alignment:
Q  41 gaaacatattggggtaaaattgctgagtattg-taatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatg 139  Q
    |||||||||||||||||||||| ||||||||| |||||||||  ||||||| |||||||| || ||||||||||| ||||||||| |||||||||| |||    
T  31205267 gaaacatattggggtaaaattgatgagtattggtaatgagtacggctcatttgattctccgcgggatctagttgcatgccgaaactgttttaattatatg 31205366  T
Q  140 agcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||||| ||||||||||||||||| ||||||||||   |||||||||| |||||||||||||||||||||| ||||||||    
T  31205367 agcaaagtaataaataaatggattagtgcttatgatgccgctaagcgtttgcaaggaagcggttggtcggaagatgatgt 31205446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 4278901 - 4278714
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    |||| ||| ||| |||||||||||||||||| |||||||||||||||| |||||||||||||| || | || ||| || |||| ||||||||||||||||    
T  4278901 cagacaggtgaagcatattggggtaaaattgttgagtattgtaatgagcattgctcattcgatccttcgcgtgatgtaattgcatgccgaaaccgtttta 4278802  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| ||||||||| || |||||||||||||||| ||||||||  ||||||||||| |||||  ||| ||||||||||| | ||||||    
T  4278801 attatatgagcaaagtactaaataaatggattggcgcttatgatggcgctaagcgtttgcaaataagtggttggtcggaggctgatgt 4278714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 76 - 158
Target Start/End: Original strand, 2779425 - 2779507
Alignment:
Q  76 tgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaaaataataaataaat 158  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||    
T  2779425 tgagtattgctcattcgattctccccgcgatctagttgcatgccgaaaccgttttaattatatgagcaaagtaataaataaat 2779507  T

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Target: chr1 (Bit Score: 180; Significance: 3e-97; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 31471020 - 31470833
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31471020 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 31470921  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31470920 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 31470833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 45241872 - 45241685
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45241872 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 45241773  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45241772 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 45241685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 17786077 - 17785890
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  17786077 cagagaggagaaacaaattggggtaaaattgctgagtattgtaatgagtattgctcattcgattatccccgcgatctagttgcatgccgaaatcgtttta 17785978  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  17785977 attatatgagcaaagtaataaataaatggattggtgcttatgaaagcactaagcgtttgcaaggaagcggttggtcggaagatgatgt 17785890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 2475441 - 2475615
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  2475441 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 2475540  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  2475541 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 2475615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 48385497 - 48385671
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  48385497 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 48385596  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  48385597 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 48385671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 47297866 - 47298040
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||||||| |||||||||| ||||||||    
T  47297866 catattggggtaaagttgctgagtattgtaatgagcattgctcattcgattctccacgcgatgtagttgcatgccgaaactgttttaattatatgagcaa 47297965  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||| ||||||||    
T  47297966 attaataaataaatggattggtgcttatgatggcgctaagcgtttgcaaggaagcggttggtcggaagatgatgt 47298040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 17676628 - 17676802
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||  |||||| |||||||||||||||||||| ||||||||    
T  17676628 catattggggtaaaattgctgagtattataatgagcattgctcattcgattctccgcgcgatgcagttgcatgccgaaaccgttttaattatatgagcaa 17676727  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| |||||||||||||  || |||||||| ||||||||||| |||||||||| ||||||||    
T  17676728 attaataaataaatgggttggtgcttatgatggcactaagcgtttgcaaggaagcagttggtcggaagatgatgt 17676802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 33167008 - 33166834
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||  || ||| || |||| |||||||||||||||| ||| ||| ||||    
T  33167008 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgatcctctgcgtgatgtaattgcttgccgaaaccgttttagttatatgtgcaa 33166909  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||| ||||||| ||||||||||| |||||||||| |||||||||||||||||| ||| ||||||||    
T  33166908 agtaataaataattggattgatgcttatgaaatcgctaagcgtttgcaaggaagcggttggtaggaagatgatgt 33166834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 38837005 - 38837179
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||  || ||| |||| ||||||||||||||| ||||||||    
T  38837005 catattggtgtaaaattgctgagtattgtaatgagcattgctcattcaattctccgcgcgatgcagctgcatgccaaaaccgttttaattatatgagcaa 38837104  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| |||||||||||||  ||||||||||| ||||||||||||||| ||| || ||||||||    
T  38837105 attaataaataaatgggttggtgcttatgatggcgctaagcgtttgcaaggaagcggttcgtcagaagatgatgt 38837179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 51523074 - 51522887
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    |||| ||| ||| |||||||||||||||||| |||||||||||||||  |||||| ||||||| |||| || ||| || |||| ||||||||||||||||    
T  51523074 cagacaggtgaagcatattggggtaaaattgatgagtattgtaatgatcattgcttattcgatcctccgcgtgatgtaattgcatgccgaaaccgtttta 51522975  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
     ||| |||||||||||| |||||||||||||||| | ||||||| ||||||||||| |||||||||| ||||||||||| | ||||||    
T  51522974 tttatatgagcaaaatactaaataaatggattggcgtttatgaaggcgctaagcgtttgcaaggaagtggttggtcggaggctgatgt 51522887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 45 - 198
Target Start/End: Complemental strand, 8471051 - 8470899
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||  ||||||| |||||||||||||||||||| ||||||||    
T  8471051 catatttgggtataattgctgagtattgtaatgagtattgctcattcgattctccgcgcgaagtagttgcatgccgaaaccgttttaattatatgagcaa 8470952  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaag 198  Q
    | |||||||||||||| || ||||||| ||  ||||||||||| ||||||||||    
T  8470951 attaataaataaatgggtt-gtgcttaagatggcgctaagcgtttgcaaggaag 8470899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 53 - 206
Target Start/End: Original strand, 18318078 - 18318231
Alignment:
Q  53 ggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaaaataataa 152  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||| |||||| || |||| ||||||||| |||||||||| |||||||||||| |||    
T  18318078 ggtaaaattgttaagtattgtaatgagcattgctcattcgattctccgcgcgatgtaattgcatgccgaaactgttttaattatatgagcaaaatactaa 18318177  T
Q  153 ataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggt 206  Q
    ||||||||||||  ||||||||| ||||||||||| |||||||||| |||||||    
T  18318178 ataaatggattgacgcttatgaaggcgctaagcgtttgcaaggaagtggttggt 18318231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 48407137 - 48406975
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| ||| || ||||||| |||||||||||||||||||| |||| |||    
T  48407137 catattggggtaaaattgttgagtattgtaacgagcattgctcattcgattctccgcgcaatgtagttgcatgccgaaaccgttttaattatatgaacaa 48407038  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| |||||            ||||||||||||||| |||||||||||||||| ||||||||    
T  48407037 attaataaataaatgggttggt------------gctaagcgtatgcaaagaagcggttggtcggaagatgatgt 48406975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 10265804 - 10265876
Alignment:
Q  147 taataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||||||||||||||||||| || ||||||||    
T  10265804 taataaataaatgggttggtgcttatgatggcgctaagcgtttgcaaggaagcggttggtcagaagatgatgt 10265876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 45978721 - 45978665
Alignment:
Q  137 atgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaa 193  Q
    |||| ||||||| | |||||||||||||  ||||||||  |||||||||||||||||    
T  45978721 atgaacaaaatacttaataaatggattgacgcttatgacggcgctaagcgtatgcaa 45978665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 179; Significance: 1e-96; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 35101228 - 35101042
Alignment:
Q  33 agagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaa 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35101228 agagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaa 35101129  T
Q  133 ttaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35101128 ttatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 35101042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 13816871 - 13816684
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13816871 cagagaggagaaacatatttgggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcatgccgaaaccgtttta 13816772  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  13816771 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgaatgcaaggaagcggttggtcggaagatgatgt 13816684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 5213617 - 5213430
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5213617 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 5213518  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  5213517 attatacgagcaaaataataaataaatggattggggcttatgaaagcgctaagcgtatgcaagtaagcggttggtcggaaaatgatgt 5213430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 33 - 200
Target Start/End: Original strand, 26749200 - 26749367
Alignment:
Q  33 agagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaa 132  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26749200 agagaggagaaacatattggtgtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcatgccgaaaccgttttaa 26749299  T
Q  133 ttaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcg 200  Q
    ||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  26749300 ttatatgagcaaagtaataaataaatggattggtgcttatgaaagcgctaaacgtttgcaaggaagcg 26749367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 1955601 - 1955775
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  1955601 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 1955700  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  1955701 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 1955775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 15056368 - 15056194
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  15056368 catattggggtaaaattgttgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 15056269  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  15056268 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 15056194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 38205538 - 38205712
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| || ||| || |||| |||||||||||||||||||| ||||||||    
T  38205538 catattggggtaaaattgctgagtattgtaatgagcattgctcattcgatcctccgcgtgatgtaattgcttgccgaaaccgttttaattatatgagcaa 38205637  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | ||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||||    
T  38205638 agtaataaataaatggattggtgcttatgaaaaagctaagcgtttgcaaggaagcggttgatcggaagatgatgt 38205712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 30529944 - 30530118
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| || ||| || |||| |||||||||||||||||||| ||||||||    
T  30529944 catattggggtaaaattgctgagtattgtaatgagcattgctcattcgatcctccgcgtgatgtaattgcttgccgaaaccgttttaattatatgagcaa 30530043  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||| ||||||||||||||||||||| ||| |||||| ||||||||| ||||  |||||| ||||||||    
T  30530044 agtaataaatgaatggattggtgcttatgaaaacgccaagcgtttgcaaggaaacggtaagtcggaagatgatgt 30530118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 41 - 219
Target Start/End: Complemental strand, 17744395 - 17744217
Alignment:
Q  41 gaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatga 140  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||| |  ||||||||||| ||||  ||| |||||||||| ||||    
T  17744395 gaaacatattagggtaaaattgctgagtattgtaatgagtatggctcatttgattctccactggatctagttgcatgccagaactgttttaattatatga 17744296  T
Q  141 gcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    ||||| |||||||||||||| |||||||||||||   |||||||||| |||||| ||| ||||||||||| ||||||||    
T  17744295 gcaaagtaataaataaatgggttggtgcttatgatgtcgctaagcgtttgcaagaaagtggttggtcggaagatgatgt 17744217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 5735849 - 5735767
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgc 114  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  5735849 cagaggggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcatttgattctccccgcgatcaagttgc 5735767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 1633962 - 1634033
Alignment:
Q  148 aataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||    
T  1633962 aataaataaatggattggtgcttatgaaagcgctaagtgtttgcaaggaagcggttggtcggaagatgatgt 1634033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 27359774 - 27359720
Alignment:
Q  155 aaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcgg 209  Q
    |||||||||||||||||| || ||||||||||| | |||||||||| ||||||||    
T  27359774 aaatggattggtgcttataaaggcgctaagcgtttacaaggaagcgattggtcgg 27359720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 27369131 - 27369077
Alignment:
Q  155 aaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcgg 209  Q
    |||||||||||||||||| || ||||||||||| | |||||||||| ||||||||    
T  27369131 aaatggattggtgcttataaaggcgctaagcgtttacaaggaagcgattggtcgg 27369077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 27392309 - 27392271
Alignment:
Q  36 gaggagaaacatattggggtaaaattgctgagtattgta 74  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  27392309 gaggtgaaacatattggggtaaaattgctgagtattgta 27392271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 178; Significance: 5e-96; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 32 - 217
Target Start/End: Complemental strand, 22194048 - 22193863
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22194048 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 22193949  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgat 217  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22193948 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgat 22193863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 36521250 - 36521076
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  36521250 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 36521151  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  36521150 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 36521076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 47 - 219
Target Start/End: Complemental strand, 22659666 - 22659494
Alignment:
Q  47 tattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaaaa 146  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||||||||     
T  22659666 tattggggtaaaattgttgagtattttaatgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgagcaaat 22659567  T
Q  147 taataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||||||||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||    
T  22659566 taataaataaatgggttggtgcttatgatggcgttaagcgtatgcaaggaagcggttggtcggaagatgatgt 22659494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 32127561 - 32127735
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||| || ||| || |||| |||||||||||||||||||| ||||||||    
T  32127561 catattggggtaaaattgctgagtattgcaatgagcattgctcattcgatcctccgcgtgatataattgcttgccgaaaccgttttaattatatgagcaa 32127660  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | ||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||| ||||||||    
T  32127661 agtaataaataaatggattggtgcttatgaaagtgttaagcgtttgcaaggaagcggttggtcggaagatgatgt 32127735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 26814886 - 26814712
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||||  |||| || ||| || |||| |||||||||||||||||||| ||||||||    
T  26814886 catattggggtaaaattgctaagtattgcaatgagcattgctcattcgaccctccgcgtgatataattgcttgccgaaaccgttttaattatatgagcaa 26814787  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||||||| |||||||||||| ||||||||| ||||||||| |||||||||||| ||||||||    
T  26814786 agtaataaataaatggattgatgcttatgaaagtgctaagcgtttgcaaggaaacggttggtcggaagatgatgt 26814712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 40301220 - 40301310
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaatta 135  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||| |||||||||| |||||||||    
T  40301220 catattggggtaaaattgctgagtattgtaatgagcattgctcattcgattctccgtgcgatgtagttgcatgccgaaaccattttaatta 40301310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 1940162 - 1940268
Alignment:
Q  41 gaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatga 140  Q
    ||||||||||| |||| ||||| ||||| | |||||||| |||  ||||||||| |||| ||||||  |||||  || ||||||||||||||||| |||     
T  1940162 gaaacatattgaggtagaattgttgagtgt-gtaatgagcatttatcattcgatcctccgcgcgatgaagttgaatgtcgaaaccgttttaattatatgt 1940260  T
Q  141 gcaaaata 148  Q
     |||||||    
T  1940261 acaaaata 1940268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1240 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: scaffold1240
Description:

Target: scaffold1240; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 32 - 219
Target Start/End: Original strand, 17 - 204
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  17 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctctccgcgatctagttgcatgccgaaaccgtttta 116  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  117 attatatgagcaaagtaataaataaatggattggtgcttatgaaagcactaagcgtttgcaaggaagcggttggtcggaagatgatgt 204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 4e-84; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 31012330 - 31012491
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31012330 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 31012429  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaa 193  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31012430 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaa 31012491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 32 - 219
Target Start/End: Complemental strand, 4579829 - 4579654
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgtttta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||| |||||||||||||||||    
T  4579829 cagagaggagaaacatattggggtaaaattgctgagtattgt------------tcattcgattctccccgcgatctagttgtctgccgaaaccgtttta 4579742  T
Q  132 attaaatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4579741 attatatgagcaaaataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 4579654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 32973672 - 32973846
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  32973672 catattggggtaaaattgctgagtattgtaatgagcattgctcattcgattctccgcgcgatatagttgcatgccgaaaccgttttaattatatgaacaa 32973771  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  32973772 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 32973846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 27945375 - 27945201
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  27945375 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 27945276  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  27945275 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 27945201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 40891545 - 40891371
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||    
T  40891545 catattggggtaaaattgctgagtattgtaacgagcattgctcattcgattctccgcgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 40891446  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  40891445 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggttggtcggaagatgatgt 40891371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 30646179 - 30646353
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||| ||||||||| |||||||||| ||||||||    
T  30646179 catattggggtaaaattgctgagtattgtaatgagcattgctcattcgattctccgctcgatgtagttgcatgccgaaactgttttaattatatgagcaa 30646278  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    |  ||||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||| ||||||||    
T  30646279 atgaataaataaatgggttggtgcttatgatggcgctaagcgtttgcaaggaagcggttggtcggaagatgatgt 30646353  T

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Target: chr5; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 45 - 219
Target Start/End: Original strand, 29616839 - 29617013
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||| |||||||||| ||||||||||||| ||| |||| ||||||||||||||  ||||| ||||||| |||||||||||||||||||| |||| |||    
T  29616839 catatttgggtaaaattcctgagtattgtaacgagcattgatcattcgattctccgtgcgatgtagttgcatgccgaaaccgttttaattatatgaacaa 29616938  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  29616939 attaataaataaatgggttggtgcttatgatagcgctaagcgtatgcaaggaagcggtttgtcggaagatgatgt 29617013  T

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Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 34710720 - 34710648
Alignment:
Q  147 taataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  34710720 taataaataaatggattggtgcttatgaaagtgctaagcgtttgcaaggaagcggttggtcggaagatgatgt 34710648  T

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Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 21365310 - 21365263
Alignment:
Q  32 cagagaggagaaacatattggggtaaaattgctgagtattgtaatgag 79  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||    
T  21365310 cagataggtgaaacatattggggtaaaattgctgagtattgtaatgag 21365263  T

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Target: scaffold0004 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 105597 - 105423
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||| || ||| || |||| |||||||||||||||||||| ||||||||    
T  105597 catattggggtaaaattgctgagtattgcaatgagcattgctcattcgatcctccgcgtgatataattgcttgccgaaaccgttttaattatatgagcaa 105498  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcggatgatgatgt 219  Q
    | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  105497 agtaataaataaatggattggtgcttatgaaagtgctaagcgtttgcaaggaagcggttggtcggaagatgatgt 105423  T

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Target: scaffold0021 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 45 - 205
Target Start/End: Original strand, 110521 - 110681
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaatgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaa 144  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| || ||| || |||| |||||||||||||||||||| ||||||||    
T  110521 catattggggtaaaattgctgagtattgtaatgagcattgctcattcgatcctccgcgtgatgtaattgcttgccgaaaccgttttaattatatgagcaa 110620  T
Q  145 aataataaataaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttgg 205  Q
    | ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  110621 agtaataaataaatggattggtgcttatgaaagcgctaagcttttgcaaggaagcggttgg 110681  T

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Target: scaffold0007 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 210
Target Start/End: Original strand, 166670 - 166804
Alignment:
Q  76 tgagtattgctcattcgattctccccgcgatctagttgcctgccgaaaccgttttaattaaatgagcaaaataataaataaatggattggtgcttatgaa 175  Q
    ||||||||| ||||| ||| |||| ||||||  |||||| ||||||||||||| |||||| |||| |  ||||||   |||||||||||| ||||||||     
T  166670 tgagtattgttcatttgatcctccgcgcgatggagttgcatgccgaaaccgttataattatatgaactgaataatgggtaaatggattggcgcttatgat 166769  T
Q  176 agcgctaagcgtatgcaaggaagcggttggtcgga 210  Q
    |||||||||||| ||||||||||||||||||||||    
T  166770 agcgctaagcgtttgcaaggaagcggttggtcgga 166804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 76
Target Start/End: Complemental strand, 32 - 1
Alignment:
Q  45 catattggggtaaaattgctgagtattgtaat 76  Q
    ||||||||||||||||||||||||||||||||    
T  32 catattggggtaaaattgctgagtattgtaat 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0658 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0658
Description:

Target: scaffold0658; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 6549 - 6604
Alignment:
Q  155 aaatggattggtgcttatgaaagcgctaagcgtatgcaaggaagcggttggtcgga 210  Q
    ||||||||||||||||||||| ||||||||| | ||||| ||| |||||| |||||    
T  6549 aaatggattggtgcttatgaaggcgctaagcttttgcaatgaaacggttgatcgga 6604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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