View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0497-Insertion-1 (Length: 680)

Name: NF0497-Insertion-1
Description: NF0497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0497-Insertion-1
NF0497-Insertion-1
[»] chr7 (59 HSPs)
chr7 (199-353)||(34651869-34652023)
chr7 (201-353)||(38235905-38236055)
chr7 (201-353)||(7666982-7667135)
chr7 (201-353)||(28437359-28437512)
chr7 (198-353)||(41002067-41002221)
chr7 (199-353)||(33113459-33113609)
chr7 (201-353)||(43188968-43189120)
chr7 (198-342)||(23620610-23620753)
chr7 (204-355)||(36747405-36747560)
chr7 (203-353)||(47275821-47275972)
chr7 (250-353)||(42620220-42620322)
chr7 (242-353)||(44720192-44720302)
chr7 (217-353)||(5967887-5968023)
chr7 (431-607)||(11673941-11674117)
chr7 (217-353)||(19644403-19644542)
chr7 (201-343)||(3658329-3658471)
chr7 (248-353)||(33810078-33810182)
chr7 (248-353)||(43665035-43665139)
chr7 (248-353)||(33406497-33406602)
chr7 (420-566)||(39426441-39426587)
chr7 (248-353)||(42220151-42220255)
chr7 (248-345)||(39410244-39410337)
chr7 (265-353)||(43778457-43778545)
chr7 (406-592)||(3850517-3850702)
chr7 (426-545)||(31206622-31206741)
chr7 (274-353)||(46449283-46449362)
chr7 (431-545)||(31210076-31210190)
chr7 (251-340)||(16568622-16568710)
chr7 (251-340)||(16596952-16597040)
chr7 (422-499)||(22301143-22301220)
chr7 (254-352)||(12863525-12863622)
chr7 (280-353)||(4787900-4787973)
chr7 (254-353)||(18789008-18789106)
chr7 (280-339)||(46611781-46611839)
chr7 (201-342)||(23465818-23465959)
chr7 (199-347)||(42112774-42112923)
chr7 (280-353)||(36845339-36845411)
chr7 (303-353)||(22556624-22556674)
chr7 (301-342)||(48935094-48935135)
chr7 (509-605)||(5434941-5435037)
chr7 (250-342)||(14676352-14676443)
chr7 (197-244)||(3658677-3658724)
chr7 (199-238)||(42854118-42854157)
chr7 (198-244)||(7667331-7667377)
chr7 (253-327)||(23552313-23552387)
chr7 (303-353)||(24923314-24923364)
chr7 (303-353)||(41471549-41471599)
chr7 (283-353)||(42266908-42266977)
chr7 (280-342)||(45510464-45510525)
chr7 (252-297)||(3591828-3591873)
chr7 (303-340)||(38138055-38138092)
chr7 (201-238)||(44690089-44690126)
chr7 (274-355)||(46509374-46509454)
chr7 (360-408)||(11674153-11674201)
chr7 (307-347)||(23551487-23551527)
chr7 (303-347)||(31055469-31055513)
chr7 (279-339)||(32851750-32851810)
chr7 (201-245)||(33406797-33406841)
chr7 (303-347)||(38233656-38233700)
[»] chr6 (28 HSPs)
chr6 (197-353)||(29241647-29241803)
chr6 (199-353)||(23094945-23095098)
chr6 (201-353)||(5825443-5825595)
chr6 (201-353)||(26574213-26574365)
chr6 (205-353)||(24734991-24735141)
chr6 (196-353)||(31345182-31345341)
chr6 (205-353)||(26480953-26481101)
chr6 (201-354)||(4909698-4909852)
chr6 (431-589)||(19697846-19698004)
chr6 (209-353)||(34914738-34914882)
chr6 (199-353)||(1029404-1029557)
chr6 (355-408)||(6591754-6591807)
chr6 (420-519)||(6591839-6591938)
chr6 (515-606)||(15517982-15518073)
chr6 (283-353)||(16329490-16329559)
chr6 (358-408)||(19976209-19976259)
chr6 (301-353)||(33212431-33212483)
chr6 (284-339)||(5613552-5613606)
chr6 (302-353)||(8439314-8439365)
chr6 (198-244)||(2365763-2365809)
chr6 (303-353)||(29054678-29054728)
chr6 (301-353)||(2608624-2608676)
chr6 (303-355)||(6695405-6695457)
chr6 (301-353)||(15986454-15986506)
chr6 (360-408)||(19697762-19697810)
chr6 (199-235)||(24734757-24734793)
chr6 (303-347)||(26713970-26714014)
chr6 (305-353)||(33677134-33677182)
[»] scaffold0028 (3 HSPs)
scaffold0028 (198-353)||(35270-35425)
scaffold0028 (420-526)||(127721-127827)
scaffold0028 (432-506)||(110162-110236)
[»] chr2 (63 HSPs)
chr2 (422-592)||(21189357-21189527)
chr2 (197-353)||(40357568-40357724)
chr2 (226-353)||(7184232-7184358)
chr2 (201-353)||(31550079-31550232)
chr2 (197-353)||(18018413-18018568)
chr2 (197-353)||(36567092-36567248)
chr2 (198-353)||(25955649-25955804)
chr2 (224-353)||(8410770-8410900)
chr2 (201-353)||(14008147-14008299)
chr2 (431-599)||(2590449-2590617)
chr2 (199-353)||(8990779-8990933)
chr2 (199-353)||(10165524-10165678)
chr2 (199-353)||(18826047-18826196)
chr2 (199-353)||(38293999-38294153)
chr2 (249-353)||(32243586-32243690)
chr2 (196-353)||(13765749-13765909)
chr2 (203-353)||(4042075-4042225)
chr2 (224-353)||(38023288-38023417)
chr2 (249-353)||(726059-726162)
chr2 (254-353)||(8555648-8555746)
chr2 (254-353)||(3038818-3038917)
chr2 (204-353)||(19382988-19383138)
chr2 (203-353)||(31899176-31899326)
chr2 (209-353)||(44020450-44020590)
chr2 (201-342)||(1726022-1726159)
chr2 (432-607)||(18739113-18739289)
chr2 (251-353)||(18780495-18780596)
chr2 (431-599)||(35969278-35969442)
chr2 (420-594)||(14433589-14433764)
chr2 (199-342)||(30312242-30312386)
chr2 (251-353)||(12963839-12963941)
chr2 (248-307)||(3119349-3119408)
chr2 (253-353)||(29880875-29880974)
chr2 (448-579)||(1043114-1043244)
chr2 (254-300)||(43334924-43334970)
chr2 (234-315)||(18562037-18562117)
chr2 (248-301)||(28009723-28009776)
chr2 (303-353)||(26599175-26599225)
chr2 (248-326)||(14363375-14363454)
chr2 (280-352)||(30523389-30523460)
chr2 (280-347)||(32950993-32951060)
chr2 (301-347)||(5972314-5972360)
chr2 (303-353)||(36030904-36030954)
chr2 (280-347)||(16625703-16625768)
chr2 (278-355)||(11950108-11950183)
chr2 (199-238)||(37201787-37201826)
chr2 (319-353)||(3119788-3119822)
chr2 (303-353)||(7310153-7310203)
chr2 (198-244)||(14008494-14008540)
chr2 (235-353)||(28554348-28554465)
chr2 (301-347)||(30265277-30265323)
chr2 (304-353)||(3022806-3022855)
chr2 (199-244)||(3120016-3120061)
chr2 (284-353)||(13767529-13767597)
chr2 (200-244)||(3039114-3039158)
chr2 (360-408)||(14433508-14433556)
chr2 (360-408)||(18739029-18739077)
chr2 (201-237)||(21625996-21626032)
chr2 (305-353)||(26427643-26427691)
chr2 (317-353)||(36574382-36574418)
chr2 (283-347)||(41503271-41503335)
chr2 (321-353)||(44137246-44137278)
chr2 (198-238)||(44137303-44137343)
[»] chr1 (75 HSPs)
chr1 (198-355)||(15463920-15464077)
chr1 (202-353)||(13255455-13255605)
chr1 (197-353)||(33991652-33991809)
chr1 (205-353)||(11017712-11017860)
chr1 (198-353)||(1523706-1523861)
chr1 (201-353)||(2925755-2925905)
chr1 (205-353)||(13061218-13061367)
chr1 (201-353)||(32300166-32300318)
chr1 (198-353)||(50247707-50247862)
chr1 (201-353)||(1688035-1688187)
chr1 (200-353)||(42161871-42162023)
chr1 (201-353)||(45565241-45565392)
chr1 (198-353)||(896312-896465)
chr1 (199-353)||(23871279-23871433)
chr1 (201-353)||(32299213-32299366)
chr1 (421-606)||(12141643-12141828)
chr1 (196-353)||(2175445-2175604)
chr1 (422-610)||(24981154-24981342)
chr1 (203-353)||(47905511-47905659)
chr1 (230-353)||(39889505-39889628)
chr1 (199-353)||(50402852-50403007)
chr1 (248-353)||(42488492-42488597)
chr1 (248-353)||(12293923-12294027)
chr1 (201-353)||(27500095-27500247)
chr1 (198-340)||(26940703-26940845)
chr1 (195-353)||(43571781-43571935)
chr1 (230-353)||(17675307-17675428)
chr1 (201-326)||(38795103-38795228)
chr1 (248-353)||(47206290-47206394)
chr1 (455-592)||(1953643-1953780)
chr1 (224-328)||(8156187-8156291)
chr1 (248-353)||(51246440-51246544)
chr1 (249-353)||(26757022-26757125)
chr1 (431-607)||(47580335-47580513)
chr1 (230-335)||(7965569-7965673)
chr1 (205-333)||(7401388-7401516)
chr1 (248-347)||(40707068-40707168)
chr1 (201-353)||(50476639-50476791)
chr1 (420-506)||(9111531-9111617)
chr1 (199-323)||(30538589-30538713)
chr1 (248-353)||(17688450-17688558)
chr1 (247-353)||(938112-938221)
chr1 (285-353)||(14153222-14153289)
chr1 (254-353)||(36668521-36668619)
chr1 (253-347)||(9173620-9173713)
chr1 (283-353)||(30543264-30543333)
chr1 (420-545)||(4242559-4242684)
chr1 (426-592)||(51465452-51465606)
chr1 (360-408)||(1953828-1953876)
chr1 (251-342)||(28773257-28773350)
chr1 (358-408)||(26310467-26310517)
chr1 (201-326)||(39508906-39509031)
chr1 (355-408)||(4242473-4242526)
chr1 (360-408)||(12141561-12141609)
chr1 (301-353)||(26345736-26345788)
chr1 (301-353)||(41432680-41432732)
chr1 (358-408)||(51465645-51465693)
chr1 (252-342)||(28748312-28748401)
chr1 (303-353)||(42806281-42806331)
chr1 (304-350)||(51303096-51303142)
chr1 (196-249)||(9595776-9595829)
chr1 (464-576)||(39197184-39197297)
chr1 (280-353)||(52073356-52073428)
chr1 (301-353)||(1278580-1278632)
chr1 (301-353)||(33579364-33579416)
chr1 (301-353)||(34918660-34918712)
chr1 (302-353)||(36269854-36269905)
chr1 (201-244)||(39179272-39179315)
chr1 (313-355)||(1063445-1063487)
chr1 (311-353)||(1071083-1071125)
chr1 (303-353)||(4204700-4204750)
chr1 (307-353)||(5883528-5883574)
chr1 (303-353)||(43530218-43530268)
chr1 (279-347)||(38857909-38857977)
chr1 (303-347)||(39886844-39886888)
[»] chr3 (62 HSPs)
chr3 (201-353)||(49860947-49861099)
chr3 (203-353)||(47434114-47434264)
chr3 (201-353)||(41961795-41961947)
chr3 (198-353)||(47789261-47789416)
chr3 (199-353)||(43237401-43237555)
chr3 (196-353)||(38515348-38515505)
chr3 (205-355)||(49682824-49682973)
chr3 (201-353)||(30121340-30121492)
chr3 (202-354)||(55445017-55445171)
chr3 (201-353)||(3042946-3043098)
chr3 (198-353)||(39499309-39499464)
chr3 (205-353)||(46017316-46017464)
chr3 (230-353)||(23163634-23163757)
chr3 (230-353)||(25428779-25428901)
chr3 (201-353)||(44411972-44412125)
chr3 (205-353)||(47714492-47714643)
chr3 (201-353)||(17642700-17642852)
chr3 (201-353)||(36796535-36796688)
chr3 (201-353)||(43007346-43007492)
chr3 (248-353)||(30131752-30131856)
chr3 (246-353)||(2420770-2420876)
chr3 (248-353)||(33982605-33982709)
chr3 (248-353)||(7661147-7661254)
chr3 (249-353)||(38526264-38526367)
chr3 (209-346)||(34306715-34306852)
chr3 (200-353)||(55439695-55439849)
chr3 (196-332)||(45555769-45555908)
chr3 (248-333)||(27055778-27055863)
chr3 (261-353)||(46312298-46312390)
chr3 (450-662)||(11634190-11634402)
chr3 (248-353)||(38593063-38593171)
chr3 (268-347)||(42583183-42583263)
chr3 (278-353)||(31178143-31178217)
chr3 (249-342)||(15499166-15499258)
chr3 (276-347)||(7302201-7302272)
chr3 (280-355)||(30697480-30697554)
chr3 (280-353)||(32858941-32859012)
chr3 (274-355)||(11500211-11500292)
chr3 (301-353)||(4247228-4247280)
chr3 (303-353)||(46891497-46891547)
chr3 (304-353)||(13638537-13638586)
chr3 (198-243)||(30132052-30132097)
chr3 (205-353)||(31651268-31651415)
chr3 (197-237)||(3537433-3537473)
chr3 (360-408)||(11634076-11634124)
chr3 (248-288)||(38593238-38593278)
chr3 (301-353)||(42134608-42134660)
chr3 (284-347)||(23568180-23568242)
chr3 (302-353)||(27681914-27681965)
chr3 (199-238)||(38456485-38456524)
chr3 (198-244)||(2420534-2420580)
chr3 (301-347)||(29623353-29623399)
chr3 (201-247)||(47789609-47789655)
chr3 (303-353)||(51686617-51686667)
chr3 (303-353)||(54748422-54748472)
chr3 (280-353)||(1132833-1132905)
chr3 (198-243)||(2927730-2927775)
chr3 (280-353)||(40674218-40674290)
chr3 (306-354)||(7965126-7965174)
chr3 (198-238)||(32859065-32859105)
chr3 (303-347)||(40118827-40118871)
chr3 (305-353)||(52620757-52620805)
[»] scaffold1562 (1 HSPs)
scaffold1562 (198-353)||(251-406)
[»] scaffold1158 (1 HSPs)
scaffold1158 (198-353)||(2187-2342)
[»] chr5 (41 HSPs)
chr5 (198-353)||(4648798-4648957)
chr5 (201-353)||(1658288-1658439)
chr5 (198-353)||(17093008-17093163)
chr5 (197-346)||(35701521-35701670)
chr5 (205-353)||(25027033-25027181)
chr5 (198-353)||(25598584-25598739)
chr5 (205-353)||(38302182-38302328)
chr5 (422-610)||(18594752-18594940)
chr5 (200-353)||(33718292-33718445)
chr5 (252-353)||(35868941-35869041)
chr5 (249-353)||(32760867-32760972)
chr5 (198-353)||(10295594-10295752)
chr5 (198-347)||(38120010-38120158)
chr5 (256-353)||(27480047-27480142)
chr5 (248-353)||(26149714-26149819)
chr5 (248-335)||(41638498-41638584)
chr5 (230-353)||(2021091-2021214)
chr5 (422-592)||(39292061-39292224)
chr5 (248-332)||(37508224-37508308)
chr5 (420-607)||(26703007-26703195)
chr5 (420-607)||(26972740-26972928)
chr5 (197-353)||(9684605-9684761)
chr5 (303-353)||(41695088-41695138)
chr5 (301-353)||(13293902-13293954)
chr5 (280-353)||(19389726-19389798)
chr5 (264-354)||(27350888-27350977)
chr5 (280-353)||(39011942-39012013)
chr5 (265-326)||(7398664-7398724)
chr5 (304-353)||(28154801-28154850)
chr5 (303-347)||(6044650-6044694)
chr5 (283-355)||(6373247-6373319)
chr5 (307-353)||(6491295-6491341)
chr5 (280-342)||(17668032-17668093)
chr5 (198-243)||(1935231-1935276)
chr5 (280-353)||(15399926-15399998)
chr5 (280-353)||(35042315-35042387)
chr5 (302-342)||(5696501-5696541)
chr5 (303-355)||(8944154-8944206)
chr5 (303-347)||(13450586-13450630)
chr5 (253-321)||(22114848-22114916)
chr5 (280-352)||(28523730-28523801)
[»] scaffold0636 (1 HSPs)
scaffold0636 (201-353)||(8502-8654)
[»] chr4 (65 HSPs)
chr4 (198-352)||(20534039-20534193)
chr4 (199-353)||(41844546-41844700)
chr4 (199-353)||(38366138-38366291)
chr4 (201-353)||(32648822-32648974)
chr4 (197-353)||(17873307-17873463)
chr4 (198-353)||(24280022-24280177)
chr4 (201-353)||(32060757-32060909)
chr4 (198-353)||(3126827-3126982)
chr4 (199-353)||(24291496-24291651)
chr4 (201-353)||(36151189-36151340)
chr4 (230-353)||(38317075-38317198)
chr4 (205-353)||(17622295-17622442)
chr4 (197-353)||(904308-904470)
chr4 (431-622)||(6667720-6667911)
chr4 (205-353)||(7182009-7182161)
chr4 (248-353)||(49404489-49404593)
chr4 (205-355)||(16535801-16535950)
chr4 (199-347)||(32948342-32948491)
chr4 (201-353)||(37756537-37756693)
chr4 (201-353)||(41363630-41363782)
chr4 (206-341)||(13270106-13270241)
chr4 (254-353)||(47669921-47670019)
chr4 (422-601)||(13010525-13010703)
chr4 (199-353)||(31530130-31530288)
chr4 (274-353)||(23708247-23708325)
chr4 (270-353)||(48830702-48830784)
chr4 (205-327)||(21295940-21296062)
chr4 (248-353)||(22558888-22558991)
chr4 (199-353)||(52594437-52594596)
chr4 (204-330)||(50642953-50643083)
chr4 (431-584)||(6671392-6671537)
chr4 (249-352)||(21730192-21730296)
chr4 (411-488)||(20058084-20058161)
chr4 (420-529)||(44643471-44643579)
chr4 (420-527)||(895463-895570)
chr4 (360-408)||(44643612-44643660)
chr4 (248-341)||(24662613-24662705)
chr4 (303-347)||(38957465-38957509)
chr4 (285-352)||(52671200-52671267)
chr4 (286-353)||(53013698-53013764)
chr4 (303-353)||(48417531-48417581)
chr4 (303-353)||(49936613-49936663)
chr4 (303-353)||(51431055-51431105)
chr4 (280-349)||(8828108-8828176)
chr4 (197-238)||(22845046-22845087)
chr4 (280-353)||(31340878-31340951)
chr4 (280-353)||(40422970-40423043)
chr4 (280-353)||(46669842-46669915)
chr4 (314-355)||(54806580-54806621)
chr4 (280-356)||(15451235-15451310)
chr4 (274-353)||(4441914-4441993)
chr4 (197-244)||(7182357-7182404)
chr4 (280-351)||(9021047-9021117)
chr4 (548-607)||(20058180-20058239)
chr4 (280-347)||(46176835-46176901)
chr4 (201-247)||(38365901-38365947)
chr4 (248-326)||(50640256-50640333)
chr4 (198-244)||(54806344-54806390)
chr4 (280-353)||(27485160-27485233)
chr4 (302-353)||(24682914-24682966)
chr4 (200-244)||(31340658-31340702)
chr4 (195-227)||(41363995-41364027)
chr4 (305-353)||(42954719-42954767)
chr4 (199-235)||(45899511-45899547)
chr4 (306-342)||(53300036-53300072)
[»] scaffold0717 (1 HSPs)
scaffold0717 (198-353)||(1689-1845)
[»] chr8 (53 HSPs)
chr8 (431-607)||(1788900-1789077)
chr8 (205-353)||(4734318-4734466)
chr8 (201-353)||(34148398-34148549)
chr8 (198-353)||(13864907-13865062)
chr8 (422-630)||(17028270-17028480)
chr8 (422-630)||(17558706-17558916)
chr8 (201-353)||(36906298-36906452)
chr8 (201-353)||(37659351-37659501)
chr8 (201-353)||(33230864-33231017)
chr8 (201-353)||(36102708-36102860)
chr8 (199-353)||(1941866-1942023)
chr8 (199-353)||(25033491-25033645)
chr8 (209-353)||(3404399-3404544)
chr8 (405-598)||(39655676-39655869)
chr8 (205-353)||(34349826-34349974)
chr8 (248-353)||(34272626-34272730)
chr8 (422-657)||(38678575-38678809)
chr8 (257-353)||(7296-7392)
chr8 (248-353)||(2474633-2474737)
chr8 (482-657)||(38676196-38676373)
chr8 (431-546)||(21185322-21185437)
chr8 (462-607)||(21347052-21347197)
chr8 (355-408)||(39655601-39655654)
chr8 (280-345)||(15108162-15108226)
chr8 (247-341)||(6839664-6839756)
chr8 (358-413)||(31183851-31183906)
chr8 (303-353)||(31297268-31297318)
chr8 (246-291)||(31297227-31297272)
chr8 (282-353)||(3394072-3394142)
chr8 (358-408)||(21347263-21347313)
chr8 (432-498)||(31183750-31183816)
chr8 (280-350)||(37388393-37388462)
chr8 (204-329)||(43732936-43733060)
chr8 (280-353)||(13258597-13258669)
chr8 (303-347)||(11876934-11876978)
chr8 (303-347)||(11891941-11891985)
chr8 (301-353)||(13537453-13537505)
chr8 (301-353)||(13627001-13627053)
chr8 (280-352)||(27085460-27085532)
chr8 (301-353)||(40984992-40985044)
chr8 (306-353)||(29612102-29612149)
chr8 (302-353)||(35353938-35353989)
chr8 (306-353)||(39779904-39779951)
chr8 (280-342)||(5941185-5941247)
chr8 (303-353)||(10605077-10605127)
chr8 (422-468)||(38676893-38676939)
chr8 (304-353)||(38404452-38404501)
chr8 (313-353)||(4137817-4137857)
chr8 (303-355)||(14641504-14641556)
chr8 (422-466)||(17088762-17088806)
chr8 (198-238)||(34272383-34272423)
chr8 (303-347)||(39194048-39194092)
chr8 (303-355)||(41540420-41540472)
[»] scaffold0952 (1 HSPs)
scaffold0952 (198-353)||(3484-3640)
[»] scaffold0014 (1 HSPs)
scaffold0014 (431-607)||(82561-82738)
[»] scaffold0059 (2 HSPs)
scaffold0059 (230-330)||(67901-68000)
scaffold0059 (230-330)||(76006-76105)
[»] scaffold0013 (1 HSPs)
scaffold0013 (248-330)||(107675-107756)
[»] scaffold0078 (1 HSPs)
scaffold0078 (251-340)||(4401-4489)
[»] scaffold0623 (1 HSPs)
scaffold0623 (250-300)||(611-661)
[»] scaffold0459 (1 HSPs)
scaffold0459 (250-300)||(10248-10298)
[»] scaffold0076 (1 HSPs)
scaffold0076 (422-527)||(6752-6857)
[»] scaffold1763 (1 HSPs)
scaffold1763 (280-353)||(502-574)
[»] scaffold0927 (1 HSPs)
scaffold0927 (303-347)||(2830-2874)
[»] scaffold0245 (1 HSPs)
scaffold0245 (301-353)||(4257-4309)
[»] scaffold0229 (1 HSPs)
scaffold0229 (301-353)||(4588-4640)
[»] scaffold0007 (1 HSPs)
scaffold0007 (301-342)||(68618-68659)
[»] scaffold0194 (1 HSPs)
scaffold0194 (302-353)||(7878-7927)
[»] scaffold0006 (1 HSPs)
scaffold0006 (197-237)||(59668-59708)


Alignment Details
Target: chr7 (Bit Score: 112; Significance: 3e-56; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 199 - 353
Target Start/End: Original strand, 34651869 - 34652023
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt-agaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    ||||||||||||||||| |||||||||||| ||||||||  | ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34651869 ttaggctttgtttgggagtttggaggggaagggaggggatggctttgaggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 34651968  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34651969 ac-aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 34652023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 38236055 - 38235905
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 300  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||     
T  38236055 aggctttgtttgggagtttggaggggaagggaggggagagttttgg-ggctggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac- 38235958  T
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |  |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38235957 agctttttagagaatgataaactaatacttatgattaatatacttttaatttt 38235905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 7666982 - 7667135
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaa 298  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||| | || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7666982 aggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa 7667081  T
Q  299 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     || ||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  7667082 taa-ttttttagagaatgataaactaatacttatgattaatatacatttaatttt 7667135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 28437359 - 28437512
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaa 298  Q
    |||||||||||| || |||||||||||| ||||||||| | ||| | || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28437359 aggctttgtttgagagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa 28437458  T
Q  299 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  28437459 caa-ttttttagagaatgataaactaatatttatgattaatatacttttaatttt 28437512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 198 - 353
Target Start/End: Original strand, 41002067 - 41002221
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    |||||| ||||||||||| ||||| |||||| ||| |||||  |||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  41002067 cttaggttttgtttgggagtttggtggggaagggaagggaggattttgggggttggaaatatatagaataatagacaaaaaattcacattttttgaaaga 41002166  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    || | ||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  41002167 ac-agttttttagataatgataaactaatacttatgattaatatatttttaatttt 41002221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 199 - 353
Target Start/End: Original strand, 33113459 - 33113609
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaaga 297  Q
    ||||||||||||||||| |||||||||||| ||| |||     ||| | |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  33113459 ttaggctttgtttgggagtttggaggggaagggaagggc----tttgggggttggaaatatatagaaaaatcgacaaaaaaattcacattttttgaaaga 33113554  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  33113555 acaa-tttttcagagaatgataaactaatacttatgattaatatacttttaatttt 33113609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 43189120 - 43188968
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| |||||| ||||| |||| |||| | ||| | || ||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  43189120 aggctttgtttgggagtttggatgggaagggagaggagggctttggggggttggaaatatatagaaaaatgaacaaaaaaatcacattttttgaaagaac 43189021  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     | ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  43189020 -agttttttagaaaatgataaactaatacttatgattaatatacttttaatttt 43188968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 198 - 342
Target Start/End: Original strand, 23620610 - 23620753
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    |||||||||||||||||| || |||||| || |||  |||| ||||||| ||||||| |||||||||||||| ||||||||||||||||||||  |||||    
T  23620610 cttaggctttgtttgggagttaggagggtaagggattggagagttttaggggttggatatatatagaaaaattgacaaaaaattcacatttttctaaaga 23620709  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatata 342  Q
    || | ||||||||||||||||||||||||||||||||||||||||    
T  23620710 ac-agttttttagagaatgataaactaatacttatgattaatata 23620753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 204 - 355
Target Start/End: Complemental strand, 36747560 - 36747405
Alignment:
Q  204 ctttgtttgggaatttggaggggaaaggaggggagtgtttt-agaggttggaaatatatagaaaaa--tggacaaaaaattcacattttttgaaagaaca 300  Q
    ||||||||| || |||||||||||| |||  |||| ||||| || ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  36747560 ctttgtttgagagtttggaggggaagggaaaggagggttttgaggggttggaaatatataaaaaaaaatggacaaaaaattcacattttttgaaagaaca 36747461  T
Q  301 aatttttt-agagaatgataaactaatacttatgattaatatactttttattttta 355  Q
      |||||| ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  36747460 gttttttttagagaatgaaaaactaatacttatgattaatatactttttaatttta 36747405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 203 - 353
Target Start/End: Original strand, 47275821 - 47275972
Alignment:
Q  203 gctttgtttgggaatttggaggggaaaggaggggagtg-ttttagaggttggaaatatatagaaaaatggac-aaaaaattcacattttttgaaagaaca 300  Q
    ||||||||||||| |||||||||||| ||| | ||| | |||  | ||||| ||||||||||||||||| || ||||||||||||||||||||||||||     
T  47275821 gctttgtttgggagtttggaggggaagggaagtgagggctttggggggttgaaaatatatagaaaaatgtacaaaaaaattcacattttttgaaagaac- 47275919  T
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47275920 agttttttagagaatgataaactaatacttatgattaatatacttttaatttt 47275972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 250 - 353
Target Start/End: Original strand, 42620220 - 42620322
Alignment:
Q  250 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttttta 349  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| |    
T  42620220 ttggaaatatatagaaaaatggacaaaaaattcacattttttaaaataacag-ttttttagagaatgataaactaatacttatgattaatatacttttaa 42620318  T
Q  350 tttt 353  Q
    ||||    
T  42620319 tttt 42620322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 242 - 353
Target Start/End: Complemental strand, 44720302 - 44720192
Alignment:
Q  242 tttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatat 341  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||    
T  44720302 tttagaggttgaaaatatatagaaaaatggacaaaatattcacattttttgaaagaac-agttttgtagagaatgataaactaatacttatgattagtat 44720204  T
Q  342 actttttatttt 353  Q
    |||||| |||||    
T  44720203 acttttaatttt 44720192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 217 - 353
Target Start/End: Original strand, 5967887 - 5968023
Alignment:
Q  217 tttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaattttttagagaat 315  Q
    ||||||| |||| ||||||||| | ||| | ||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||  |||||||||||||    
T  5967887 tttggagaggaagggaggggagggatttgggggttggaaatatataaaaaaatggataaaaaaattcacattttttaaaagaacag-ttttttagagaat 5967985  T
Q  316 gataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||||||||||| |||||    
T  5967986 gataaactaatacttatgattaatatacttttaatttt 5968023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 431 - 607
Target Start/End: Complemental strand, 11674117 - 11673941
Alignment:
Q  431 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 530  Q
    |||||| |||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||||||| ||||||  || |||||||||||||||||      
T  11674117 ctgaggtgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttgtt-cccgttatgaatcataatc 11674019  T
Q  531 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaa-ctcagtattttgtatgaga 607  Q
    | |||| |||||||| |||||||| |||||||||||| |  ||||||||||||||||| |||| ||||||| ||||||    
T  11674018 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaacctcaatattttggatgaga 11673941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 217 - 353
Target Start/End: Complemental strand, 19644542 - 19644403
Alignment:
Q  217 tttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaa--aaaattcacattttttgaaagaacaaattttttagaga 313  Q
    |||||||||||||||||||||| ||||| | || ||||||||||||||||||||||||||  ||||||||||||||||||||||||   |||||||||||    
T  19644542 tttggaggggaaaggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaaaattcacattttttgaaagaac-cgttttttagaga 19644444  T
Q  314 atgataaactaatacttatgattaat-atactttttatttt 353  Q
    || ||||| ||||||||||||||||| |||||||| |||||    
T  19644443 attataaattaatacttatgattaataatacttttaatttt 19644403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 201 - 343
Target Start/End: Original strand, 3658329 - 3658471
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 300  Q
    ||||||||||||||| |||||||||||| | ||| ||| | ||| | ||||  |||||||||||||||||||||||||||||||||||||||||| || |    
T  3658329 aggctttgtttgggagtttggaggggaaggaaggagagggctttgggggttaaaaatatatagaaaaatggacaaaaaattcacattttttgaaaaaata 3658428  T
Q  301 aattttttagagaatgataaactaatacttatgattaatatac 343  Q
      ||||||| | ||| ||||| |||||||||||||||||||||    
T  3658429 gtttttttacaaaataataaagtaatacttatgattaatatac 3658471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 33810078 - 33810182
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||| ||||| ||||||||||||| |||||||||| |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||    
T  33810078 ggttgaaaatacatagaaaaatggataaaaaattcatattttttgaaagaataa-ttttttagagaatgataaactaatatttatgattaatatactttt 33810176  T
Q  348 tatttt 353  Q
     |||||    
T  33810177 aatttt 33810182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 43665035 - 43665139
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| ||||    
T  43665035 ggttgaaaatatatagaaaaatggacaaaaaattcaatttttttgaaagaac-atttttttagagaatgataaactactacttatgattaatatattttt 43665133  T
Q  348 tatttt 353  Q
     |||||    
T  43665134 aatttt 43665139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 33406497 - 33406602
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttt 346  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  33406497 ggttgaaaatatatagaaaaatggataaaaaaattcacattttttaaaagaataa-ttttttagagaatgataaactaacacttatgattaatatacttt 33406595  T
Q  347 ttatttt 353  Q
    | |||||    
T  33406596 taatttt 33406602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 420 - 566
Target Start/End: Original strand, 39426441 - 39426587
Alignment:
Q  420 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttat 519  Q
    ||||| |||||||||||||||| ||||||||||| |||||| |||||||| |  |||| |||| ||||| ||||| |||| ||||||  ||||| |||||    
T  39426441 tgttaagtaatctgaggcgtgatatagtcactgtccttgaggattttatccgtctcataagcgaatatcctcccaagataaaacagttcttccctgttat 39426540  T
Q  520 gaatcataactgaaggttacagaacagctcaaattaatctcaaagat 566  Q
    |||||||||| | |||| |||||||| |||||||| ||| |||||||    
T  39426541 gaatcataaccggaggtgacagaacaactcaaatttatcacaaagat 39426587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 42220255 - 42220151
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||||||||||||||||||||| |  ||||||||   ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||    
T  42220255 ggttggaaatatatagaaaaataggaaaaaaatttctattttttgaaagaacaa-ttttttagataatgataaactaatacttatgattaatatattttt 42220157  T
Q  348 tatttt 353  Q
     |||||    
T  42220156 aatttt 42220151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 248 - 345
Target Start/End: Original strand, 39410244 - 39410337
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactt 345  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||   |||| |||||||||||||||||    
T  39410244 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-ggttttttagaaaatgataa---aataattatgattaatatactt 39410337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 265 - 353
Target Start/End: Original strand, 43778457 - 43778545
Alignment:
Q  265 aaaatggacaaaaaattcacatttttt-gaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||||||||| |||||||||  |||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  43778457 aaaatggacaaaaaattcacatttttttgaaagaacagttttttt-gagaatgataaactaatatttatgattaatatacttttaatttt 43778545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 406 - 592
Target Start/End: Original strand, 3850517 - 3850702
Alignment:
Q  406 aaaacaacacactatgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataac-a 504  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||| |||||  |||||||  || |||| |||||||||| ||| | |||| ||| |    
T  3850517 aaaacaacacact--gttatgtaatctgaggcgtgacatagtcactgtccttgatgattttatacgcctcataagcgcatatcctcctatgatacaacga 3850614  T
Q  505 gtcattccccgttatgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactca 592  Q
    ||  |||| || ||||||||||| |   |||| | |||||| |||||||| ||||||||||||||  || || ||| |||||||||||    
T  3850615 gttcttcctcggtatgaatcatacccagaggtgatagaacaactcaaatttatctcaaagataacatgatatttaatccagaaactca 3850702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 426 - 545
Target Start/End: Original strand, 31206622 - 31206741
Alignment:
Q  426 gtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatca 525  Q
    |||| |||||||||||||||||||||||  ||||| ||||||||  | |||| |||||||||| |  ||||||| ||||||  |||||||||||||||||    
T  31206622 gtaacctgaggcgtgacatagtcactgtctttgaggattttatccacctcataagcgcatatcctggcaggatacaacagttcttccccgttatgaatca 31206721  T
Q  526 taactgaaggttacagaaca 545  Q
    |||||| |||| ||||||||    
T  31206722 taactggaggtgacagaaca 31206741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 274 - 353
Target Start/End: Complemental strand, 46449362 - 46449283
Alignment:
Q  274 aaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||||| |||||||||||||| |||||    
T  46449362 aaaaaattcacattttttgaaagatcagtttttttagagaatgataaattaatacttataattaatatacttttaatttt 46449283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 431 - 545
Target Start/End: Original strand, 31210076 - 31210190
Alignment:
Q  431 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 530  Q
    ||||||||||||||||||||||| |||||| |||||||| || |||| || ||||||| |||| || || ||||||  ||||||||||||||||||||      
T  31210076 ctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagtgcatatcctcccggggtacaacagttcttccccgttatgaatcataatc 31210175  T
Q  531 gaaggttacagaaca 545  Q
    | |||| ||||||||    
T  31210176 ggaggtgacagaaca 31210190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 16568710 - 16568622
Alignment:
Q  251 tggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaata 340  Q
    ||||||||||||||||||| || |||  |||| |||| ||||||||||| | ||||| |||||||||||||||||| |||||||||||||    
T  16568710 tggaaatatatagaaaaatagaaaaatcattcgcattctttgaaagaactacttttt-agagaatgataaactaatgcttatgattaata 16568622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 16596952 - 16597040
Alignment:
Q  251 tggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaata 340  Q
    ||||||||||||||||||| || |||  |||| |||| ||||||||||| | |||| ||||||||||||||||||| |||||||||||||    
T  16596952 tggaaatatatagaaaaatagaaaaatcattcgcattctttgaaagaactactttt-tagagaatgataaactaatgcttatgattaata 16597040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 422 - 499
Target Start/End: Original strand, 22301143 - 22301220
Alignment:
Q  422 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggata 499  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| ||||| ||||    
T  22301143 ttatgtaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaagata 22301220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 12863525 - 12863622
Alignment:
Q  254 aaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 352  Q
    |||||| |||||||||||| ||| | ||||||||||||||||| || ||||||| ||| ||||||||| |||| ||||| ||||||||| |||| ||||    
T  12863525 aaatatgtagaaaaatggagaaatatttcacattttttgaaag-accaatttttcagataatgataaattaatgcttataattaatatatttttaattt 12863622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 4787900 - 4787973
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||  || ||||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  4787900 ttcacattttttgaaagagtaatttttttagagagtgataaattaatgcttatgattaatatatttttaatttt 4787973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 254 - 353
Target Start/End: Complemental strand, 18789106 - 18789008
Alignment:
Q  254 aaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||| | |||   || | ||||||||||||||||| |||||||||||| ||||||||||| ||||||||| || || |||| |||||    
T  18789106 aaatatatagaaaaatgaaaaaatcttttatattttttgaaagaacaa-ttttttagagaaagataaactaattcttatgattgatttatttttaatttt 18789008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 46611781 - 46611839
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaat 339  Q
    ||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||    
T  46611781 ttcacattttttgaaagat-aatttttttagagagtgataaactaatacttatgattaat 46611839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 342
Target Start/End: Original strand, 23465818 - 23465959
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggagggga-gtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| |||||||||||  ||| |||| |  ||| |  |||||||||||||  | |||||||  |||   |||||||||||| ||||||     
T  23465818 aggctttgtttgggagtttggaggggaggggaagggaagactttgaagggttggaaatataggggaaaatggtaaaatctttcacattttttaaaagaat 23465917  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatata 342  Q
    |  ||||||||||||||||||| |||| |||||||||||||||    
T  23465918 ag-ttttttagagaatgataaattaattcttatgattaatata 23465959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 347
Target Start/End: Original strand, 42112774 - 42112923
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaa-tatatagaaaaatggacaaaaaattcacattt-tttgaaag 296  Q
    ||||||||||||||||| |||||||||||  ||| || || ||||||| || ||| || |||| ||| ||||||| |||   ||||||||| ||||||||    
T  42112774 ttaggctttgtttgggagtttggaggggaggggaaggaagggttttagggggtgggaagtatagagagaaatggagaaatctttcacatttctttgaaag 42112873  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |     |||||||||||||||||||||||| ||||||||| ||||| ||||    
T  42112874 agtgt-ttttttagagaatgataaactaatgcttatgattcatatattttt 42112923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 36845339 - 36845411
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||  ||| ||||||||||||| |||| ||||||||||||||| |||| |||| |||||    
T  36845339 ttcacattttttgaaagag-aaactttttagagaatgttaaattaatacttatgattactatatttttaatttt 36845411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 22556624 - 22556674
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||| |||||    
T  22556624 ttttttagagagtgataaactaatgcttatgattaatatatttttaatttt 22556674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 342
Target Start/End: Complemental strand, 48935135 - 48935094
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatata 342  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  48935135 aattttttagagaatgataaattaatgcttatgattaatata 48935094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 509 - 605
Target Start/End: Original strand, 5434941 - 5435037
Alignment:
Q  509 ttccccgttatgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatga 605  Q
    |||||||||| ||||||||| |  || | |||||||| || ||||| |||||||| ||| | | |||||||||||| ||||||| ||||||| ||||    
T  5434941 ttccccgttaagaatcataaatagagatgacagaacaactaaaatttatctcaaaaatatcagaagatgtaacccataaactcaatattttggatga 5435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 342
Target Start/End: Complemental strand, 14676443 - 14676352
Alignment:
Q  250 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatata 342  Q
    |||||||||||  | ||||||| ||||   ||||||||||||||||| |  |||||||||| |||||||||| |||| |||||| ||||||||    
T  14676443 ttggaaatataggggaaaatggtcaaatctttcacattttttgaaag-agtaattttttagggaatgataaattaatgcttatggttaatata 14676352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 3658724 - 3658677
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt 244  Q
    ||||||||||||||||||| |||||||||||  ||||||||| |||||    
T  3658724 acttaggctttgtttgggagtttggaggggaggggaggggagggtttt 3658677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 42854118 - 42854157
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggag 238  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  42854118 ttaggctttgtttgtgaatttggaggggaagggaggggag 42854157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 7667377 - 7667331
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt 244  Q
    |||||||||||||||||| |||||||||||  ||||||||| |||||    
T  7667377 cttaggctttgtttgggagtttggaggggaggggaggggagggtttt 7667331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 23552387 - 23552313
Alignment:
Q  253 gaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaata 327  Q
    |||||||| |||||||| || |||   ||||||||||||||||||  |  ||||| |||||||||||||||||||    
T  23552387 gaaatatagagaaaaattgagaaatttttcacattttttgaaagagtatttttttcagagaatgataaactaata 23552313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 24923314 - 24923364
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| ||||  |||||||||||||| |||| |||||    
T  24923314 ttttttagagaatgataaattaatgattatgattaatatatttttaatttt 24923364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 41471599 - 41471549
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||| ||| ||| ||||||| |||| |||||    
T  41471599 ttttttagagaatgataaactaatgcttttgagtaatatatttttaatttt 41471549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 283 - 353
Target Start/End: Original strand, 42266908 - 42266977
Alignment:
Q  283 acattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||| || || ||||||||||||||||||| |||| |||||| ||| |||| |||| |||||    
T  42266908 acattttttgaaaaaataa-ttttttagagaatgataaattaatgcttatgtttactatatttttaatttt 42266977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 45510525 - 45510464
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatata 342  Q
    |||||||||| |||||||  || ||||||||||||||||||| ||||  ||||||||||||||    
T  45510525 ttcacattttgtgaaagagtaa-ttttttagagaatgataaattaatgtttatgattaatata 45510464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 3591873 - 3591828
Alignment:
Q  252 ggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    ||||||||||||||||||||| |||   ||||||||||||||||||    
T  3591873 ggaaatatatagaaaaatggagaaatctttcacattttttgaaaga 3591828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 38138092 - 38138055
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaata 340  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  38138092 ttttttagagaatgataaattaatgcttatgattaata 38138055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 44690126 - 44690089
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggag 238  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  44690126 aggctctgtttgggaatttggaggggaagggaggggag 44690089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 355
Target Start/End: Complemental strand, 46509454 - 46509374
Alignment:
Q  274 aaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattttta 355  Q
    |||||||||||||||||| | |||  || | ||||||||||||||||| ||||  ||||| |||||||| |||||| |||||    
T  46509454 aaaaaattcacatttttttagagagtaa-tgttttagagaatgataaattaatgtttatggttaatatattttttaatttta 46509374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 11674201 - 11674153
Alignment:
Q  360 aacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    |||||||||||||| |||| ||||||  ||||||||||| |||||||||    
T  11674201 aacttatcgaatttagttgtcgacacgactccatcaaaaccttcacaaa 11674153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 23551527 - 23551487
Alignment:
Q  307 ttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||||||||||||||||||| ||||||||| ||||| ||||    
T  23551527 ttagagaatgataaactaatgcttatgattcatatattttt 23551487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 31055513 - 31055469
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||| ||||||| |||| ||||||||||||||| ||||    
T  31055513 ttttttagagagtgataaattaatgcttatgattaatatattttt 31055469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 32851750 - 32851810
Alignment:
Q  279 attcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaat 339  Q
    ||||||||||||| ||||| ||| ||||||||| | ||||||| ||||  |||||||||||    
T  32851750 attcacattttttaaaagagcaatttttttagatagtgataaattaatgtttatgattaat 32851810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 33406841 - 33406797
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgtttta 245  Q
    ||||||||||||||| |||||||||||  ||||||||| ||||||    
T  33406841 aggctttgtttgggagtttggaggggaggggaggggagggtttta 33406797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 38233656 - 38233700
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||||||||||||  |||||||| ||||| ||||    
T  38233656 ttttttagagaatgataaactaatgtttatgattcatatattttt 38233700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 4e-55; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 197 - 353
Target Start/End: Original strand, 29241647 - 29241803
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 295  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| || |||||||||| |||||||||||||||||||||||||||||||||||    
T  29241647 acttaggctttgtttgggagtttggaggggaagggaggggagggctttagggggttggaaatatgtagaaaaatggacaaaaaattcacattttttgaaa 29241746  T
Q  296 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29241747 gaacaga-tttttagagaatgataaactaatacttatgattaatatacttttaatttt 29241803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 199 - 353
Target Start/End: Original strand, 23094945 - 23095098
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 298  Q
    ||||||||||||||||| ||||||| |||| |||||||||  |||  |   ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23094945 ttaggctttgtttgggagtttggagtggaagggaggggaggctttggggttttggaaatatatagaaaaatggacaaaaaattcactttttttgaaagaa 23095044  T
Q  299 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    | ||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  23095045 c-aattttttagagaatgataaaataatacttatgattaatatacttttaatttt 23095098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 5825595 - 5825443
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| |||||||||||| |||||| ||   ||| | || ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5825595 aggctttgtttgggagtttggaggggaagggagggaaggactttggggggttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 5825496  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5825495 -agttttttagagaatgataaactaatacttatgattaatatacttttaatttt 5825443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 26574213 - 26574365
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| ||||| |||||| ||||| ||| | ||| | || |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  26574213 aggctttgtttgggagtttggtggggaagggaggagagagctttggggggttggaaatatattgaaaaatagacaaaaaattcacattttttgaaagaac 26574312  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26574313 aa-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 26574365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 205 - 353
Target Start/End: Complemental strand, 24735141 - 24734991
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaatt--cacattttttgaaagaacaa 301  Q
    ||||||||||| |||||||||||  ||||||||| ||||| | || ||||||||||||||||||||||||||||||||  |||||||||||||||||||     
T  24735141 tttgtttgggagtttggaggggaggggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattttcacattttttgaaagaacag 24735042  T
Q  302 attttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24735041 -ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 24734991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 196 - 353
Target Start/End: Original strand, 31345182 - 31345341
Alignment:
Q  196 aacttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaa 294  Q
    |||| ||||||||||||||| |||||| ||||| ||||||||| ||||||| || |||||||||||||||||||||||||||||||| ||||||||||||    
T  31345182 aactaaggctttgtttgggagtttggaagggaacggaggggagggttttagggggttggaaatatatagaaaaatggacaaaaaatttacattttttgaa 31345281  T
Q  295 agaacaaattttttagagaatgataaacta-atactta-tgattaatatactttttatttt 353  Q
    |||||  |||||||||| |||||||||||| ||||||| |||||||||||||||| |||||    
T  31345282 agaac-cattttttagaaaatgataaactatatacttattgattaatatacttttaatttt 31345341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 26480953 - 26481101
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 303  Q
    ||||||||||| |||||| ||||| ||||||||| | ||| | || |||||||||||||||||||| || |||||||||||||||||||||| ||||  |    
T  26480953 tttgtttgggagtttggaagggaagggaggggagggctttcgggggttggaaatatatagaaaaattgataaaaaattcacattttttgaaaaaacag-t 26481051  T
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26481052 tttttagagaatgataaactaatacttatgattaatatacttttaatttt 26481101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 201 - 354
Target Start/End: Original strand, 4909698 - 4909852
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttg-gaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaa 298  Q
    ||||||||||||||| |||||||||||| ||||| ||| | ||| | ||||  |||||||||||||||||| |||||||| |||||||||||||||||||    
T  4909698 aggctttgtttgggagtttggaggggaagggaggcgagggctttgggggtttagaaatatatagaaaaatgaacaaaaaaattcacattttttgaaagaa 4909797  T
Q  299 caaattttttagagaatgataaactaatacttatgattaatatactttttattttt 354  Q
    ||| |||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  4909798 caa-ttttttagagaatgataaactaatgcttataattaatatacttttttttttt 4909852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 431 - 589
Target Start/End: Original strand, 19697846 - 19698004
Alignment:
Q  431 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 530  Q
    ||||||||||||||||||| ||| |||||| |||||||| || |||| |||||||||| |||||||||| ||||||  ||||||||||||||||||||      
T  19697846 ctgaggcgtgacatagtcattgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataatc 19697945  T
Q  531 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaac 589  Q
    | |||| |||||||| |||||||| |||||||||||| |  ||||||||||||||||||    
T  19697946 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaac 19698004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 209 - 353
Target Start/End: Complemental strand, 34914882 - 34914738
Alignment:
Q  209 tttgggaatttggaggggaaaggaggggagtgttttagaggttggaaa-tatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttt 307  Q
    ||||||| | |||||||||| ||||||||| ||||| | ||||  ||| ||||||||||||||||||||||||||| ||||||||||| ||||  |||||    
T  34914882 tttgggagtatggaggggaagggaggggagggttttgggggtttaaaaatatatagaaaaatggacaaaaaattcatattttttgaaaaaacag-ttttt 34914784  T
Q  308 tagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  34914783 tagagaatgataaactaatacttatgattaatatacttttaatttt 34914738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 1029557 - 1029404
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    ||||||||| ||||  | ||||||||||||  |||||||| | ||| | || |||||||||||||||||||| || |||||||||||||||||| |||||    
T  1029557 ttaggctttctttgaaagtttggaggggaatagaggggagggctttggggggttggaaatatatagaaaaatagataaaaaattcacatttttttaaaga 1029458  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||  | ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  1029457 acaa--tatttagagaatgataaactaatacttgtgattaatatacttttaatttt 1029404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 408
Target Start/End: Original strand, 6591754 - 6591807
Alignment:
Q  355 agtgaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6591754 agtgaaacttatcgaatttggttgccgacacagctccatcaaaatcttcacaaa 6591807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 420 - 519
Target Start/End: Original strand, 6591839 - 6591938
Alignment:
Q  420 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttat 519  Q
    ||||| |||| |||||||||||| |||||||||| |||||| |||||||| || |||| |||||||||| |||||||||  ||||||  ||| |||||||    
T  6591839 tgttaagtaacctgaggcgtgacgtagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatgcaacagttcttctccgttat 6591938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 515 - 606
Target Start/End: Complemental strand, 15518073 - 15517982
Alignment:
Q  515 gttatgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgag 606  Q
    ||||| ||||||||| | |||| |||||||| ||||| || |||| |||||||   |||||||||||||||||||||| ||||||| |||||    
T  15518073 gttataaatcataaccggaggtgacagaacaactcaactttatcttaaagatatgaggagatgtaacccagaaactcaatattttgaatgag 15517982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 283 - 353
Target Start/End: Complemental strand, 16329559 - 16329490
Alignment:
Q  283 acattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||| || ||||||||||||||||||| |||| || |||||||| ||| |||| |||||    
T  16329559 acattttttgaaagaataa-ttttttagagaatgataaattaatgctaatgattaaaatatttttaatttt 16329490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 19976259 - 19976209
Alignment:
Q  358 gaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    |||||||||||||||| |||| ||||| | |||||||||||||||||||||    
T  19976259 gaaacttatcgaattttgttgccgacaaaactccatcaaaatcttcacaaa 19976209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 33212483 - 33212431
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||| | |||||||||||||||||||||| ||||| |||| |||||    
T  33212483 aattttttagatagtgataaactaatacttatgattcatatatttttaatttt 33212431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 5613606 - 5613552
Alignment:
Q  284 cattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaat 339  Q
    |||||||| ||||| |||||||||||||||  |||||| |||||||||||||||||    
T  5613606 cattttttaaaaga-caaattttttagagagggataaattaatacttatgattaat 5613552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 8439314 - 8439365
Alignment:
Q  302 attttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||| ||||  |||||||||||||| |||| |||||    
T  8439314 attttttagagaatgataaattaatgtttatgattaatatatttttaatttt 8439365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 2365809 - 2365763
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt 244  Q
    |||||||||||||||||| |||||||||||  ||||||||| |||||    
T  2365809 cttaggctttgtttgggagtttggaggggaggggaggggagggtttt 2365763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 29054728 - 29054678
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| |||||  |||||||| |||| ||||||||||    
T  29054728 ttttttagagaatgataaattaatatatatgattactatattttttatttt 29054678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 2608624 - 2608676
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||| ||||||||||| ||||| ||||| ||||||||  |||||||||    
T  2608624 aattttttaaagaatgataaattaatatttatggttaatatatattttatttt 2608676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 6695457 - 6695405
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttattttta 355  Q
    |||||||||||||||||||  ||| ||||| ||||||||| |||||| |||||    
T  6695457 ttttttagagaatgataaatgaatgcttataattaatataatttttaatttta 6695405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 15986506 - 15986454
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||| ||||  | |||||||||||| |||| |||||    
T  15986506 aattttttagagaatgataaattaatgataatgattaatatatttttaatttt 15986454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 19697762 - 19697810
Alignment:
Q  360 aacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    |||||||||||||| |||| ||||||  ||||||||||| |||||||||    
T  19697762 aacttatcgaatttagttgtcgacacgactccatcaaaaccttcacaaa 19697810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 24734757 - 24734793
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggg 235  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  24734757 ttaggctttgtttgggagtttggaggggaagggaggg 24734793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 26714014 - 26713970
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||| |||||||||||||||| ||||||||| ||||| ||||    
T  26714014 ttttttatagaatgataaactaatgcttatgattcatatattttt 26713970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 305 - 353
Target Start/End: Complemental strand, 33677182 - 33677134
Alignment:
Q  305 ttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  33677182 ttttagagagtgataaattaatgcttatgattaatatatttttaatttt 33677134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 109; Significance: 2e-54; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 198 - 353
Target Start/End: Original strand, 35270 - 35425
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||||||||||||||| |||||||||||| ||||||||| | ||| | || |||||||||||||||||||||||||||||||||||||||||||||||    
T  35270 cttaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 35369  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35370 aac-agttttttagagaatgataaactaatacttatgattaatatacttttaatttt 35425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 420 - 526
Target Start/End: Complemental strand, 127827 - 127721
Alignment:
Q  420 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttat 519  Q
    |||||| ||| ||||||||||||||||||||||| |||||| |||||||| || |||  | |||||||| ||||| |||| ||||||  ||||| | |||    
T  127827 tgttatctaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcagaaacgcatatcctcccatgatacaacagttcttccctgatat 127728  T
Q  520 gaatcat 526  Q
    |||||||    
T  127727 gaatcat 127721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 432 - 506
Target Start/End: Complemental strand, 110236 - 110162
Alignment:
Q  432 tgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagt 506  Q
    |||||||||||||||||||||| |||||| |||||||| || |||| | |||||||| ||||| |||| ||||||    
T  110236 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataaacgcatatcctcccaagatacaacagt 110162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 3e-53; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 422 - 592
Target Start/End: Complemental strand, 21189527 - 21189357
Alignment:
Q  422 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 521  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||| ||||| |||||| ||||||||||||||    
T  21189527 ttatctaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctccccggatacaacagttattccccgttatga 21189428  T
Q  522 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactca 592  Q
    |||||||||| |||| |||||||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  21189427 atcataactggaggtgacagaacaactcaaaataatctcaaagataaccggagatgtaacccagaagctca 21189357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 197 - 353
Target Start/End: Complemental strand, 40357724 - 40357568
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaa-aaaattcacattttttgaaa 295  Q
    ||||||||||||||||| | |||||||||||| ||||||||| ||||| | ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  40357724 acttaggctttgtttggaagtttggaggggaagggaggggagagttttgggggttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaa 40357625  T
Q  296 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||| | |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  40357624 gaac-agttttttagagaatgataaactaatacttatgattaatataattttaatttt 40357568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 226 - 353
Target Start/End: Complemental strand, 7184358 - 7184232
Alignment:
Q  226 gaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaa 325  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  7184358 gaaaggaggggaggactttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-agttttttagagaatgataaactaa 7184260  T
Q  326 tacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||| |||||    
T  7184259 tacttatgattaatatacttttaatttt 7184232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 31550079 - 31550232
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgtttt-agaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaa 298  Q
    |||||||||||||||||||||||||||| ||||| |||  |||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31550079 aggctttgtttgggaatttggaggggaagggaggagaggattttgaggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa 31550178  T
Q  299 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     |  ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  31550179 tag-ttttttagagaatgataaactaatagttatgattaatatacttttaatttt 31550232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 353
Target Start/End: Original strand, 18018413 - 18018568
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacatttttt-gaaa 295  Q
    |||||| |||||||||||| |||||||||||| ||| ||||| | ||| | ||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  18018413 acttagactttgtttgggagtttggaggggaagggatgggagggctttgggggttgaaaatatatagaaaaatggacaaaaa-ttcacatttttttgaaa 18018511  T
Q  296 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18018512 gaacaa-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 18018568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 353
Target Start/End: Original strand, 36567092 - 36567248
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 295  Q
    ||||||||||||| || || |||||||||||| ||||||||| | ||| | || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  36567092 acttaggctttgtctgtgagtttggaggggaagggaggggagggctttggggggttgaaaatatatagaaaaatggacaaaaaattcacatttttttaaa 36567191  T
Q  296 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36567192 gaacga-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 36567248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 198 - 353
Target Start/End: Original strand, 25955649 - 25955804
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||| | || |||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  25955649 cttaggctttgtttgggagtttggaggggaaagaaggggagggctttggtgggttggaaatatatagaaaaatggacgaaaaattcacaatttttaaaag 25955748  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||  ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  25955749 aacag-ttttttagataatgataaactaatacttatgattaatatacttttaatttt 25955804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 224 - 353
Target Start/End: Original strand, 8410770 - 8410900
Alignment:
Q  224 gggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaac 322  Q
    ||||| ||||||||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||     
T  8410770 gggaagggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaggttttttagagaatgataaat 8410869  T
Q  323 taatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||||||| |||||    
T  8410870 taatacttatgattaatatacttttaatttt 8410900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 14008147 - 14008299
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggagggga-gtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| |||||||||||| |||||||| |  |||  | |||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  14008147 aggctttgtttgggagtttggaggggaagggaggggatgactttggggggttcgaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 14008246  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     | | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14008247 -agtcttttagagaatgataaactaatacttatgattaatatacttttgatttt 14008299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 431 - 599
Target Start/End: Complemental strand, 2590617 - 2590449
Alignment:
Q  431 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 530  Q
    ||||||||||||||||||||||| |||||| |||||||  || |||| |||||||||| |||||||||| ||||||  |||||||||||||||||||||     
T  2590617 ctgaggcgtgacatagtcactgtccttgaggattttattcgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataacc 2590518  T
Q  531 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtatttt 599  Q
    | |||| |||||||| |||||||| |||||| ||||| | |||||| ||||||||||||||| ||||||    
T  2590517 ggaggtgacagaacaactcaaatttatctcatagatatcaggagatataacccagaaactcaatatttt 2590449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 199 - 353
Target Start/End: Original strand, 8990779 - 8990933
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    ||||| ||||||||||| |||||||||||| | ||||||| | ||| | || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  8990779 ttaggttttgtttgggagtttggaggggaaggaaggggagggctttggggggttggaaatatatagaaaaatggacaaaatattcatattttttgaaaga 8990878  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    || | ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  8990879 ac-agttttttagaaaatgataaactaatacttatgattaatatacttttaatttt 8990933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 10165678 - 10165524
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    |||| |||||||||| | |||||||||||| |||| |||| | ||| | || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  10165678 ttagcctttgtttggaagtttggaggggaagggagaggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttaaaaga 10165579  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    || | |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  10165578 ac-agttttttagagaatgataaactaatacgtatgattaatatacttttaatttt 10165524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 199 - 353
Target Start/End: Original strand, 18826047 - 18826196
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    ||||||||||||||||| |||||||||||| ||||||      | ||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18826047 ttaggctttgtttgggagtttggaggggaagggagggc-----tctaggggattggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 18826141  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    || | |||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  18826142 ac-agttttttagagaatgatgaactaatacttatgattaatatacttttaatttt 18826196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 38294153 - 38293999
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    ||||| ||||||||||| |||||||||||| |||||||||   ||| |||| ||| ||||||||||||||||| | |||| |||||||||||||||||||    
T  38294153 ttaggttttgtttgggagtttggaggggaagggaggggaggactttggaggattgaaaatatatagaaaaatgaataaaagattcacattttttgaaaga 38294054  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38294053 acag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 38293999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 249 - 353
Target Start/End: Complemental strand, 32243690 - 32243586
Alignment:
Q  249 gttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32243690 gttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacaa-ttttttagagaatgataaactaatacttatgattaatatactttt 32243592  T
Q  348 tatttt 353  Q
     |||||    
T  32243591 aatttt 32243586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 196 - 353
Target Start/End: Original strand, 13765749 - 13765909
Alignment:
Q  196 aacttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttgg----aaatatatagaaaaatggacaaaaaattcacatttttt 291  Q
    |||||||||||||||||||| |||||||| ||||||||||||| | ||| | ||  ||    ||||||||||||||||||| |||||| |||||||||||    
T  13765749 aacttaggctttgtttgggagtttggaggagaaaggaggggagggctttggggggggggtgaaaatatatagaaaaatggataaaaaaatcacatttttt 13765848  T
Q  292 gaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| |||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13765849 gaaggaacag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 13765909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 203 - 353
Target Start/End: Complemental strand, 4042225 - 4042075
Alignment:
Q  203 gctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaa 301  Q
    |||||||||||||  |||||||||||  |||||||| ||||| | || ||| ||||||||||||||||||||||||| |||||||||||| |||| |||     
T  4042225 gctttgtttgggagcttggaggggaagagaggggagggttttggggggttgaaaatatatagaaaaatggacaaaaagttcacatttttttaaagtacag 4042126  T
Q  302 attttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4042125 -ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 4042075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 224 - 353
Target Start/End: Original strand, 38023288 - 38023417
Alignment:
Q  224 gggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaattttttagagaatgataaac 322  Q
    ||||| ||||||||| ||||| | ||||| |||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  38023288 gggaagggaggggagggttttgggggttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacag-ttttttagagaatgataaac 38023386  T
Q  323 taatacttatgattaatatactttttatttt 353  Q
    |||| |||||||||||||||||||| |||||    
T  38023387 taattcttatgattaatatacttttaatttt 38023417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 249 - 353
Target Start/End: Complemental strand, 726162 - 726059
Alignment:
Q  249 gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttttt 348  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  726162 gttggaaatatatagaaaaatgaacaaaaaattcactttttctgaaagaacaa-ttttttagagaatgataaactaatacttatgattaatatactttta 726064  T
Q  349 atttt 353  Q
    |||||    
T  726063 atttt 726059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 254 - 353
Target Start/End: Original strand, 8555648 - 8555746
Alignment:
Q  254 aaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  8555648 aaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-aactttttagagaatgataaactaatatttatgattaatatacttttaatttt 8555746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 254 - 353
Target Start/End: Original strand, 3038818 - 3038917
Alignment:
Q  254 aaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 352  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  3038818 aaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacaa-ttttttagaaaatgataaactaatacttatgattaatatacttttaattt 3038916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 204 - 353
Target Start/End: Complemental strand, 19383138 - 19382988
Alignment:
Q  204 ctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaa 302  Q
    |||||||||||| ||||||| |||| ||||| ||| | ||| | || ||| |||||||||||||||||||||||||||||||||||||| |||||||  |    
T  19383138 ctttgtttgggagtttggagaggaagggaggagagggctttggggggttgaaaatatatagaaaaatggacaaaaaattcacatttttttaaagaacgga 19383039  T
Q  303 ttttttagagaatgat-aaactaatacttatgattaatatactttttatttt 353  Q
     ||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  19383038 -tttttagagaatgataaaactaatacttatgattaatatacttttaatttt 19382988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 203 - 353
Target Start/End: Original strand, 31899176 - 31899326
Alignment:
Q  203 gctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaa 301  Q
    ||||||||||||| |||||||||||| |||| |||    ||| | || ||||||||||||||||||||| |||||||||||||| ||||||||||||| |    
T  31899176 gctttgtttgggagtttggaggggaagggagaggaaaactttggggggttggaaatatatagaaaaatgaacaaaaaattcacaatttttgaaagaac-a 31899274  T
Q  302 attttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     ||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  31899275 gttttttagagactgataaactaatagttatgattaatatacttttaatttt 31899326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 209 - 353
Target Start/End: Complemental strand, 44020590 - 44020450
Alignment:
Q  209 tttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttt 307  Q
    ||||||| |||||||||||| ||||| ||| ||||| | || ||| ||||||||||||||||||||||||  ||||  |||||||||||||||| |||||    
T  44020590 tttgggagtttggaggggaagggaggagagggttttggggggttgaaaatatatagaaaaatggacaaaa--ttca--ttttttgaaagaacaa-ttttt 44020496  T
Q  308 tagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  44020495 tagagaatgataaactaatacttatgattaatatacttttaatttt 44020450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 201 - 342
Target Start/End: Complemental strand, 1726159 - 1726022
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaac 299  Q
    |||||||||||| || |||||||| ||| ||||||||| | ||  | |||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  1726159 aggctttgtttgagagtttggaggagaagggaggggagggcttggg-ggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa- 1726062  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatata 342  Q
       ||||||||||||||||||||||||| ||||||||||||||    
T  1726061 ---ttttttagagaatgataaactaatatttatgattaatata 1726022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 432 - 607
Target Start/End: Original strand, 18739113 - 18739289
Alignment:
Q  432 tgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataactg 531  Q
    |||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||  ||| ||| ||  ||||||||||||||||||||  |    
T  18739113 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccacaatacaacggttcttccccgttatgaatcataatcg 18739212  T
Q  532 aaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaa-ctcagtattttgtatgaga 607  Q
     |||| |||||||||||| |||| |||||||| ||| |  ||||||||||||||||| |||| ||||||| ||||||    
T  18739213 gaggtgacagaacagctcgaatttatctcaaatatatcatgagatgtaacccagaaacctcaatattttggatgaga 18739289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 251 - 353
Target Start/End: Complemental strand, 18780596 - 18780495
Alignment:
Q  251 tggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttat 350  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| | || ||||||||| |||||||||||| ||||||||||||||||||| ||    
T  18780596 tggaaatatataaaaaaatggacaaaaaattcacattttttgaaagaac-agttatttagagaacgataaactaatatttatgattaatatacttttaat 18780498  T
Q  351 ttt 353  Q
    |||    
T  18780497 ttt 18780495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 431 - 599
Target Start/End: Original strand, 35969278 - 35969442
Alignment:
Q  431 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 530  Q
    ||||||||||||||||||||||| |||||  |||||||| || |||  |||||||||||   || | || ||||||  |||||||||||||||||||||     
T  35969278 ctgaggcgtgacatagtcactgtccttgaagattttatccgcctcaaaagcgcatatca---catgtta-aacagttcttccccgttatgaatcataaca 35969373  T
Q  531 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtatttt 599  Q
    | |||| |||||||| |||||||| |||||||||||||||| |||||||||| ||||||||| ||||||    
T  35969374 ggaggtaacagaacaactcaaatttatctcaaagataaccgaagatgtaacctagaaactcaatatttt 35969442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 420 - 594
Target Start/End: Original strand, 14433589 - 14433764
Alignment:
Q  420 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataaca-gtcattccccgtta 518  Q
    |||||||||| ||||||||||||||||||||||| |||| | |||||||| || |||| ||  || ||| ||||| |||| |||| ||  ||||||||||    
T  14433589 tgttatgtaacctgaggcgtgacatagtcactgtccttgtggattttatccgcctcataagtacacatcttcccaagatacaacatgttcttccccgtta 14433688  T
Q  519 tgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagt 594  Q
    |||||||||||  ||||| |||||| | |||||||| |||||||||||| | |||||||||||| |||||| ||||    
T  14433689 tgaatcataaccaaaggtgacagaataactcaaatttatctcaaagatatcaggagatgtaacctagaaacccagt 14433764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 199 - 342
Target Start/End: Original strand, 30312242 - 30312386
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgt---tttagaggttggaaatatatagaaaaatggacaaaa-aattcacattttttgaa 294  Q
    |||||||||||||| || ||||||||||||  |||||||| |    ||| | ||||| |||||||||||||||| ||||||| ||||||||||||  |||    
T  30312242 ttaggctttgtttgagagtttggaggggaagagaggggagggaggctttgggggttgaaaatatatagaaaaatagacaaaataattcacatttt--gaa 30312339  T
Q  295 agaacaaattttttagagaatgataaactaatacttatgattaatata 342  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  30312340 agaacag-ttttttagagaatgataaactaatacttatgattaatata 30312386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 251 - 353
Target Start/End: Original strand, 12963839 - 12963941
Alignment:
Q  251 tggaaatatatagaaaaa-tggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttttta 349  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||| ||||  ||||||||| ||||||||| || || ||||||||||||||||||| |    
T  12963839 tggaaatatatagaaaaaatggacaaaaaattcacattttctgaaataacag-ttttttagaaaatgataaagtagtatttatgattaatatacttttaa 12963937  T
Q  350 tttt 353  Q
    ||||    
T  12963938 tttt 12963941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 3119349 - 3119408
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttt 307  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  3119349 ggttggaaatatataaaaaaatggacaaaaaattcacattttttgaaagaataatttttt 3119408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 253 - 353
Target Start/End: Complemental strand, 29880974 - 29880875
Alignment:
Q  253 gaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 352  Q
    |||||||||||||||||||  |||   |||||  ||||||||||| ||| |||||||||||||||||||| ||| ||||||||||||||| |||| ||||    
T  29880974 gaaatatatagaaaaatggtgaaatctttcactgtttttgaaagagcaa-ttttttagagaatgataaacgaatgcttatgattaatatatttttaattt 29880876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 448 - 579
Target Start/End: Complemental strand, 1043244 - 1043114
Alignment:
Q  448 cactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataactgaaggttacagaacagc 547  Q
    |||||| |||||| |||||||| |  ||||  ||||||||| |||||||||| ||| ||  ||||| ||||||||||||||  |  ||| |||||||||     
T  1043244 cactgtccttgaggattttatccgtctcataggcgcatatcctcccaggatacaaccgttcttccc-gttatgaatcataatcgggggtgacagaacagg 1043146  T
Q  548 tcaaattaatctcaaagataaccggagatgta 579  Q
    ||||||| |||||||||||||| |||||||||    
T  1043145 tcaaattcatctcaaagataacaggagatgta 1043114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 43334970 - 43334924
Alignment:
Q  254 aaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 300  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  43334970 aaatatattgaaaaatggacaaaaaattcacattttttgaaagaaca 43334924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 234 - 315
Target Start/End: Complemental strand, 18562117 - 18562037
Alignment:
Q  234 gggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaat 315  Q
    ||||| ||||| | ||||||||||||||||||||||||| |||| ||||||||||||| ||| ||| | |||||||||||||    
T  18562117 gggagggttttgggggttggaaatatatagaaaaatggataaaatattcacattttttaaaacaac-agttttttagagaat 18562037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 248 - 301
Target Start/End: Original strand, 28009723 - 28009776
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaa 301  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  28009723 ggttagaaatatatcaaaaaatggacaaaaaattcacattttttgaaagaacaa 28009776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 26599175 - 26599225
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||||||||    
T  26599175 ttttctagagaatgataaaataatacttatgattaatatattttttatttt 26599225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 326
Target Start/End: Original strand, 14363375 - 14363454
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaa--ttcacattttttgaaagaacaaattttttagagaatgataaactaat 326  Q
    ||||| ||||||||||| ||||||| ||||||  |||||| ||||| ||||||||| ||||||||| ||||||||||||||    
T  14363375 ggttgaaaatatatagataaatggaaaaaaaactttcacactttttaaaagaacaa-ttttttagaaaatgataaactaat 14363454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 30523460 - 30523389
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 352  Q
    ||||||||||||||||||  |  ||||||| ||||||||||| |||||||||||||||||||| |||| ||||    
T  30523460 ttcacattttttgaaagagtag-ttttttaaagaatgataaattaatacttatgattaatatatttttaattt 30523389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 280 - 347
Target Start/End: Complemental strand, 32951060 - 32950993
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||| |||| |||||  || ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  32951060 ttcacatcttttaaaagagtaacttttttagagaatgataaattaatatttatgattaatatattttt 32950993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 301 - 347
Target Start/End: Original strand, 5972314 - 5972360
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||||||| |||||||||||| |||||||||||||||||||| ||||    
T  5972314 aatttttttgagaatgataaattaatacttatgattaatatattttt 5972360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 36030954 - 36030904
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  36030954 ttttttagagaatgataaattaatgcttatgattaatatatttttaatttt 36030904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 347
Target Start/End: Original strand, 16625703 - 16625768
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||||||  |  |||||||||||||||||||| ||| ||||||||| ||||| ||||    
T  16625703 ttcacattttttgaaagagta--ttttttagagaatgataaaccaatgcttatgattcatatattttt 16625768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 355
Target Start/End: Complemental strand, 11950183 - 11950108
Alignment:
Q  278 aattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgatt-aatatactttttattttta 355  Q
    |||||||||||||| |||||| |  ||||||||| ||||||||| ||||||||||| || |||||| ||||||||||||    
T  11950183 aattcacatttttttaaagaata--ttttttagataatgataaattaatacttatggttaaatata-tttttattttta 11950108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 238
Target Start/End: Complemental strand, 37201826 - 37201787
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggag 238  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  37201826 ttaggctttgtttgcgaatttggaggggaagggaggggag 37201787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 3119788 - 3119822
Alignment:
Q  319 aaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||||||||||| |||||    
T  3119788 aaactaatacttatgattaatatacttttaatttt 3119822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 7310203 - 7310153
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||  |||||||| |||||||||| |||| |||||    
T  7310203 ttttttagagaatgataaataaatacttacgattaatatatttttaatttt 7310153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 14008540 - 14008494
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt 244  Q
    |||||||||| ||||||| |||||||||||| ||||||||| |||||    
T  14008540 cttaggctttctttgggagtttggaggggaagggaggggagggtttt 14008494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 235 - 353
Target Start/End: Complemental strand, 28554465 - 28554348
Alignment:
Q  235 ggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatga 334  Q
    |||| ||||||| |||  |||||||||||||||||||  |||   || | ||||||| ||||| ||| | ||||||||||| ||||||||||  ||||||    
T  28554465 ggagggttttaggggtaagaaatatatagaaaaatggggaaatcttttatatttttttaaagagcaa-tcttttagagaatcataaactaatgtttatga 28554367  T
Q  335 ttaatatactttttatttt 353  Q
    ||| |||| |||| |||||    
T  28554366 ttagtatatttttgatttt 28554348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 347
Target Start/End: Original strand, 30265277 - 30265323
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||| ||||| |||| ||||||||||||||| ||||    
T  30265277 aattttttagagaataataaattaatgcttatgattaatatattttt 30265323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 353
Target Start/End: Complemental strand, 3022855 - 3022806
Alignment:
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||| ||||  |||||||||||||| |||| |||||    
T  3022855 tttttagagaatgataaattaatgtttatgattaatatatttttaatttt 3022806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 3120061 - 3120016
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt 244  Q
    |||||||||||||| || ||||||||||| |||||||||| |||||    
T  3120061 ttaggctttgtttgagattttggaggggagaggaggggagggtttt 3120016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 353
Target Start/End: Complemental strand, 13767597 - 13767529
Alignment:
Q  284 cattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||  || ||| ||||||||||||||| ||||  |||||||||||||| |||| |||||    
T  13767597 cattttttgaaagagtaattttattagagaatgataaa-taatgtttatgattaatatatttttaatttt 13767529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 3039158 - 3039114
Alignment:
Q  200 taggctttgtttgggaatttggaggggaaaggaggggagtgtttt 244  Q
    |||||||||||||||| ||||||||||| |||||| ||| |||||    
T  3039158 taggctttgtttgggagtttggaggggagaggaggagagggtttt 3039114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 14433508 - 14433556
Alignment:
Q  360 aacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    ||||||||||||||  ||| |||||  ||||||||||||||||||||||    
T  14433508 aacttatcgaatttaattgtcgacatggctccatcaaaatcttcacaaa 14433556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 18739029 - 18739077
Alignment:
Q  360 aacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    |||||||||||||| |||| ||||||  ||||||||||| |||||||||    
T  18739029 aacttatcgaatttagttgtcgacacgactccatcaaaaccttcacaaa 18739077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 21625996 - 21626032
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggagggga 237  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  21625996 aggctttgtttgcgaatttggaggggaatggagggga 21626032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 305 - 353
Target Start/End: Complemental strand, 26427691 - 26427643
Alignment:
Q  305 ttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||| | |||| ||||||||||||||| |||| |||||    
T  26427691 ttttagagaatgatatattaatgcttatgattaatatatttttaatttt 26427643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 36574382 - 36574418
Alignment:
Q  317 ataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||||| |||| |||||    
T  36574382 ataaactaatacttatgattaatatatttttaatttt 36574418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 283 - 347
Target Start/End: Complemental strand, 41503335 - 41503271
Alignment:
Q  283 acattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||||||||||||||  |  || |||||||||||||||| ||||  |||||||||||||| ||||    
T  41503335 acattttttgaaagagtagtttgtttagagaatgataaattaatgattatgattaatatattttt 41503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 44137278 - 44137246
Alignment:
Q  321 actaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||||||||| |||||    
T  44137278 actaatacttatgattaatatacttttaatttt 44137246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 44137343 - 44137303
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggag 238  Q
    |||||||||||||||||| |||||||||||| ||| |||||    
T  44137343 cttaggctttgtttgggagtttggaggggaagggaagggag 44137303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 3e-53; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 198 - 355
Target Start/End: Complemental strand, 15464077 - 15463920
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||||||||||||||| |||| ||||||| ||||||||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||    
T  15464077 cttaggctttgtttgggagtttgaaggggaagggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 15463978  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttattttta 355  Q
    |||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15463977 aac-gtttttttagagaatgataaactaatacttatgattaatatacttttaattttta 15463920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 202 - 353
Target Start/End: Complemental strand, 13255605 - 13255455
Alignment:
Q  202 ggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaa 301  Q
    ||||||||| |||| |||||||| ||| ||||||||| | ||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  13255605 ggctttgttggggagtttggaggagaagggaggggagggctttgggggttggaaatatatagaaaaatggacaaaaaatttacattttttgaaagaac-a 13255507  T
Q  302 attttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13255506 attttttagagaatgataaactaatacttatgattaatatacttttgatttt 13255455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 197 - 353
Target Start/End: Complemental strand, 33991809 - 33991652
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaa 294  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||| | || |||||||||||||||||||||||||||||| |||||||||||||||    
T  33991809 acttaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaa 33991710  T
Q  295 agaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33991709 agaacag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 33991652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 205 - 353
Target Start/End: Complemental strand, 11017860 - 11017712
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 303  Q
    |||||||||||||| | ||||||||||||||||| ||||| | || |||||||||||||||||||| ||||||||||||||||||||||||||||| | |    
T  11017860 tttgtttgggaattcgtaggggaaaggaggggagggttttggggggttggaaatatatagaaaaatagacaaaaaattcacattttttgaaagaac-agt 11017762  T
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11017761 tttttagagaatgataaactaatacttatgattaatatacttttaatttt 11017712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 198 - 353
Target Start/End: Complemental strand, 1523861 - 1523706
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||||||||||||||| |||||||||||| ||| ||||| ||||| | || |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  1523861 cttaggctttgtttgggagtttggaggggaatggatgggagagttttggggggttggaaatatattgaaaaatggacaaaaaattcacatttttttaaag 1523762  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  1523761 aacaaat-ttttaaagaatgataaactaatacttatgattaatatacttttaatttt 1523706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 2925755 - 2925905
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 300  Q
    ||||||||||||||| |||| ||||||| ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  2925755 aggctttgtttgggagtttgaaggggaagggaggggagagcttt-gaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaaaac- 2925852  T
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  2925853 aattttttagaaaatgataaaataatacttatgattaatatacttttaatttt 2925905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 13061218 - 13061367
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 303  Q
    ||||||||| | |||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||||||||||||||||||||||  |    
T  13061218 tttgtttggaagtttggaggggaagggaggggagggttttggggggttggaaatatatagagaaatggacaaaaaattcacattttttgaaagaacagtt 13061317  T
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  13061318 tttttagaaaatgataaactaatacttatgattaatatacttttaatttt 13061367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 32300318 - 32300166
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttag-aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||| | ||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  32300318 aggctttgtttgggagtttggaggggaagggaggggagggctttgggaggttggaaatatgtagaaaaatggacaaaaaattcacattttttaaaagaac 32300219  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     | ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  32300218 -agttttttagaaaatgataaactaatacttatgattaatatacttttaatttt 32300166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 198 - 353
Target Start/End: Complemental strand, 50247862 - 50247707
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttaga-ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||||||| ||||||| |||||||||||| ||||||||| ||||| |  ||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  50247862 cttaggctttctttgggagtttggaggggaagggaggggagggttttgggtggttggaaatatatagaaaaatggacaaataattcacattttttaaaag 50247763  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    || |  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50247762 aatag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 50247707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 1688035 - 1688187
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    |||| |||||||||| |||||||||||| ||||||||| | ||| | || ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1688035 aggcgttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatgaacaaaaaattcacattttttgaaagaac 1688134  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     | | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1688135 -agtcttttagagaatgataaactaatacttatgattaatatacttttaatttt 1688187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 200 - 353
Target Start/End: Original strand, 42161871 - 42162023
Alignment:
Q  200 taggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    |||||||||||||||| ||||||||||||  |||||||| | ||| | ||||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  42161871 taggctttgtttgggagtttggaggggaagagaggggagggctttgggggttggaaatatataaaaaaatagacaataaattcacattttttgaaagaac 42161970  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     | ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  42161971 -agttttttagagaatgataaactaatatttatgattaatatacttttaatttt 42162023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 45565392 - 45565241
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgtttt-agaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    |||||||||||| || |||||||||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  45565392 aggctttgtttgcgagtttggaggggaagggaggggagggttttgaggggttggaaatatatagaaaaatggacaaaaattt-acattttttgaaagaac 45565294  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |  ||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  45565293 ag-ttttttagagaatgataaacttatacttatgattaatatacttttaatttt 45565241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 198 - 353
Target Start/End: Original strand, 896312 - 896465
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    |||||||||||||||||| |||||||| ||| ||||||||| | ||| | |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  896312 cttaggctttgtttgggagtttggaggagaagggaggggagggctttgggggttggaaatatatagaaaaatggac-aaaaattcacattttttgaaaga 896410  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| | |||||| |||||| ||||||||||||||| |||||||||||||| |||||    
T  896411 acaga-tttttaaagaatggtaaactaatacttataattaatatacttttaatttt 896465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 199 - 353
Target Start/End: Original strand, 23871279 - 23871433
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    ||||||||||| ||||| ||||||||| || ||||||||| | ||| | || ||||||||||||||||||||||| |||| |||||||||||||||||||    
T  23871279 ttaggctttgtctgggagtttggagggaaagggaggggagggctttggggggttggaaatatatagaaaaatggataaaatattcacattttttgaaaga 23871378  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23871379 acag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 23871433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 32299366 - 32299213
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttag--aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 298  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||| |  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  32299366 aggctttgtttgggagtttggaggggaagggaggggagggcttttgggaggttggaaatatgtagaaaaatggacaaaaaattcacattttttaaaagaa 32299267  T
Q  299 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |   ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  32299266 c-tgttttttagaaaatgataaactaatacttatgattaatatacttttaatttt 32299213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 421 - 606
Target Start/End: Original strand, 12141643 - 12141828
Alignment:
Q  421 gttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatg 520  Q
    |||| |||| ||||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||||||| |||| | |||||||||||||    
T  12141643 gttaagtaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacaattattccccgttatg 12141742  T
Q  521 aatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgag 606  Q
    ||||||||||  |||| |||||||| |||||||| || ||||||||| | | |||| ||||||| ||||||| ||||||| |||||    
T  12141743 aatcataactagaggtgacagaacaactcaaatttatatcaaagatatcagaagatataacccaaaaactcaatattttggatgag 12141828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 196 - 353
Target Start/End: Complemental strand, 2175604 - 2175445
Alignment:
Q  196 aacttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaa--ttcacattttttga 293  Q
    |||| ||| ||||||||||| |||||||||| | |||||| ||   ||| | |||| |||||||||||||||||||||||||||  ||||||||||||||    
T  2175604 aactaaggttttgtttgggagtttggaggggtagggagggaaggactttgggggttcgaaatatatagaaaaatggacaaaaaaaattcacattttttga 2175505  T
Q  294 aagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2175504 aagaacaatttttttagagaatgataaactaatatttatgattaatatacttttaatttt 2175445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 422 - 610
Target Start/End: Original strand, 24981154 - 24981342
Alignment:
Q  422 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 521  Q
    |||||||| |||||||||||||||||||  || |||||| |||||||| || |||| ||| |||||| |||||||||| ||||||  |||||||||||||    
T  24981154 ttatgtaacctgaggcgtgacatagtcagcgtccttgaggattttatccgcctcataagcacatatcctcccaggatacaacagttcttccccgttatga 24981253  T
Q  522 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgagaaaa 610  Q
    |||||||| | || | | |||||| |||||||| |||||||||||| | ||||||||||| |||||||||| ||||||| |||||||||    
T  24981254 atcataaccggagatgatagaacaactcaaatttatctcaaagatatcaggagatgtaacacagaaactcaatattttggatgagaaaa 24981342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 203 - 353
Target Start/End: Original strand, 47905511 - 47905659
Alignment:
Q  203 gctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaa 302  Q
    |||||||||| || |||| ||||||| ||| ||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||| |     
T  47905511 gctttgtttgagagtttgaaggggaagggaagggaggggtttgg-ggttggaaatatatagaaaaatggacaaaaaattcacattttttaaaagaac-ag 47905608  T
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  47905609 ttttttagagaatgataaactaatactaatgattaatatacttttaatttt 47905659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 230 - 353
Target Start/End: Original strand, 39889505 - 39889628
Alignment:
Q  230 ggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatac 328  Q
    ||||||||| ||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  39889505 ggaggggagggttttagggggttggaaatatatagaaaaattgacaaaaaattcacattttttgaaagaac-ggttttttagagaatgataaactaatac 39889603  T
Q  329 ttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| |||||    
T  39889604 ttatgattaatatacttttaatttt 39889628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 50403007 - 50402852
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaag 296  Q
    ||||||||||||||||| ||||||||| || |||| |||| | ||| |||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  50403007 ttaggctttgtttgggagtttggagggtaagggagaggagggctttggaggattggaaatatatagaaaaatggacaaaaaaattcacatttttttaaag 50402908  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||  |||||| ||||||||||||||||||||||||||||||||| |||| |||||    
T  50402907 aacagttttttt-gagaatgataaactaatacttatgattaatatatttttaatttt 50402852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 42488492 - 42488597
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacatttttt-gaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttt 346  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  42488492 ggttggaaatatatagaaaaatggacaaaaaattcacatttttttgaaagaacag-ttttttagagaatgataaactaatacttatgattaatatacttt 42488590  T
Q  347 ttatttt 353  Q
    | |||||    
T  42488591 tgatttt 42488597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 12294027 - 12293923
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  12294027 ggttggaaatatatagaaaaatggacaaaaatttcacattttttgaaagaac-agttttttagagaatgataaactaatacttattattaatatactttt 12293929  T
Q  348 tatttt 353  Q
     |||||    
T  12293928 aatttt 12293923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 27500247 - 27500095
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    |||| |||||||||| ||||||| |||| ||||||||| | ||| | || |||||||||||||||||||||   ||||||||||||||||||||||||||    
T  27500247 aggcattgtttgggagtttggagaggaagggaggggagggctttggggggttggaaatatatagaaaaatgacaaaaaaattcacattttttgaaagaac 27500148  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |  |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  27500147 ag-ttttttagtgaatgataaactaatacttatgattaatatacttttaatttt 27500095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 198 - 340
Target Start/End: Complemental strand, 26940845 - 26940703
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||||||||||||| | |||||||||||| | |||||||  |||| | || ||||||||||||||||||||| |||||||||||||||||| | ||||    
T  26940845 cttaggctttgtttggaagtttggaggggaaggaaggggaggattttggggggttggaaatatatagaaaaatgaacaaaaaattcacattttgtaaaag 26940746  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaata 340  Q
    ||| | ||||||||| ||||||||||||||||||||||||||||    
T  26940745 aac-agttttttagaaaatgataaactaatacttatgattaata 26940703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 195 - 353
Target Start/End: Original strand, 43571781 - 43571935
Alignment:
Q  195 caacttaggctttgtttgggaatttggaggggaaaggagggg-agtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttga 293  Q
    ||||||||||||||||||||| ||||||| |||| ||||||| ||  |||  | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  43571781 caacttaggctttgtttgggagtttggagaggaagggaggggaaggctttggggggttggaaatatatacaaaaatggacaagaaattcacattttttga 43571880  T
Q  294 aagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    || ||| | ||||||||||||||||||||||    ||||||||||||||||||| |||||    
T  43571881 aaaaac-agttttttagagaatgataaacta----ttatgattaatatacttttaatttt 43571935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 230 - 353
Target Start/End: Complemental strand, 17675428 - 17675307
Alignment:
Q  230 ggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatact 329  Q
    ||||||||| | ||| | ||||| |||||||||||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||||||| |    
T  17675428 ggaggggagggctttgggggttgaaaatatatagaaaaatggacaaaaaaatcatattttt-gaaagaacaa-ttttttagagaatgataaactaatatt 17675331  T
Q  330 tatgattaatatactttttatttt 353  Q
    |||||||||||||||||| |||||    
T  17675330 tatgattaatatacttttaatttt 17675307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 201 - 326
Target Start/End: Complemental strand, 38795228 - 38795103
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| |||||||||||| |||||||||   ||| | || |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  38795228 aggctttgtttgggagtttggaggggaagggaggggagaactttggtgggttggaaatatatagaaaaattgacaaaaaaatcacattttttgaaagaac 38795129  T
Q  300 aaattttttagagaatgataaactaat 326  Q
     | ||||||||||||||||||||||||    
T  38795128 -agttttttagagaatgataaactaat 38795103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 47206290 - 47206394
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||| |  |||||||||||| |||||| ||||||||||||||||||||||||    
T  47206290 ggttggaaatatatagaaaaattgataaaaaattcacattttttgaaagaac-agctttttagagaattataaacaaatacttatgattaatatactttt 47206388  T
Q  348 tatttt 353  Q
     |||||    
T  47206389 aatttt 47206394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 455 - 592
Target Start/End: Complemental strand, 1953780 - 1953643
Alignment:
Q  455 cttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataactgaaggttacagaacagctcaaatt 554  Q
    |||||| ||||||||||| |||| |||| ||||| |||||||||| ||||||  ||||| ||||||||||||||| | |||| |||||||| ||||||||    
T  1953780 cttgaggattttatctgcctcataagcgaatatcctcccaggatacaacagttcttccctgttatgaatcataacgggaggtgacagaacaactcaaatt 1953681  T
Q  555 aatctcaaagataaccggagatgtaacccagaaactca 592  Q
     ||| |||||||  | ||||||||||||||||||||||    
T  1953680 tatcacaaagatgtcaggagatgtaacccagaaactca 1953643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 224 - 328
Target Start/End: Original strand, 8156187 - 8156291
Alignment:
Q  224 gggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggac-aaaaaattcacattttttgaaagaacaaattttttagagaatgataaac 322  Q
    ||||| ||||||||| | ||| | ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8156187 gggaagggaggggagggctttgggggttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaac-aattttttagagaatgataaac 8156285  T
Q  323 taatac 328  Q
    ||||||    
T  8156286 taatac 8156291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 51246440 - 51246544
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||||||||||    
T  51246440 ggttggaaatatataaaaaaatgcataaaaaatttacattttttgaaagaacag-ttttttagagaatgataaactaatctttatgattaatatactttt 51246538  T
Q  348 tatttt 353  Q
     |||||    
T  51246539 aatttt 51246544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 249 - 353
Target Start/End: Original strand, 26757022 - 26757125
Alignment:
Q  249 gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttttt 348  Q
    ||||||||||| |||||| ||||| |||||||||||||||| | |||||||| |||||| | |||||||||||||||||||||||||||||||||||||     
T  26757022 gttggaaatatgtagaaatatggataaaaaattcacattttgtaaaagaacatatttttaa-agaatgataaactaatacttatgattaatatactttta 26757120  T
Q  349 atttt 353  Q
    |||||    
T  26757121 atttt 26757125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 431 - 607
Target Start/End: Complemental strand, 47580513 - 47580335
Alignment:
Q  431 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcc--caggatataacagtcattccccgttatgaatcataa 528  Q
    ||||||||||||||||||| ||| |||||  ||||||||||| |||| |||| ||||| |||  ||||||| |||||   ||||||||||||||||||||    
T  47580513 ctgaggcgtgacatagtcaatgtccttgaagattttatctgcctcataagcgaatatcctccaccaggatacaacaggtcttccccgttatgaatcataa 47580414  T
Q  529 ctgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgaga 607  Q
    |  ||| | |||||| | |||||||| ||| |||||||  | ||||||||||||||||||||||  |||||| ||||||    
T  47580413 ccaaagatgacagaagaactcaaatttatcacaaagatgtcaggagatgtaacccagaaactcaacattttggatgaga 47580335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 230 - 335
Target Start/End: Complemental strand, 7965673 - 7965569
Alignment:
Q  230 ggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacatt-ttttgaaagaacaaattttttagagaatgataaactaatac 328  Q
    |||||||| |||||| | |||||||||||||||||||||| || |||||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  7965673 ggaggggaatgttttgg-ggttggaaatatatagaaaaatagataaaaaattcacatttttttgaaagaacaga-tttttagagaatgataaactaatac 7965576  T
Q  329 ttatgat 335  Q
    |||||||    
T  7965575 ttatgat 7965569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 205 - 333
Target Start/End: Original strand, 7401388 - 7401516
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 303  Q
    ||||||||||| ||||||||||||  |||||||| | ||| | || || |||||||||||||||||||| |||||||||||||||||||||| ||| | |    
T  7401388 tttgtttgggagtttggaggggaagagaggggagggctttggggggttagaaatatatagaaaaatggataaaaaattcacattttttgaaaaaac-agt 7401486  T
Q  304 tttttagagaatgataaactaatacttatg 333  Q
    |||||||||||| |||||||||| ||||||    
T  7401487 tttttagagaataataaactaatgcttatg 7401516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 248 - 347
Target Start/End: Original strand, 40707068 - 40707168
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatg--ataaactaatacttatgattaatatactt 345  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||||| | ||||||||||||||  |||||||||||||||| ||| ||||||||    
T  40707068 ggttggaaatatatagaaaaatggataaaaaattaacattttttaaaagaac-agttttttagagaatgatataaactaatacttataattgatatactt 40707166  T
Q  346 tt 347  Q
    ||    
T  40707167 tt 40707168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 50476791 - 50476639
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttg-gaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| |||||||||||| ||  ||||| ||||| |||| || |||||||||||| ||||||| |||   |||||||||||||||||| |    
T  50476791 aggctttgtttgggagtttggaggggaagggtagggagggttttggagggtgagaaatatatagagaaatggagaaatctttcacattttttgaaagagc 50476692  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     ||||||| ||| |||||||||||||| ||||| ||| ||||| |||| |||||    
T  50476691 -aatttttaagataatgataaactaatgcttattattgatatatttttaatttt 50476639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 420 - 506
Target Start/End: Original strand, 9111531 - 9111617
Alignment:
Q  420 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagt 506  Q
    |||||| ||||||||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||||||| ||||||    
T  9111531 tgttatataatctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcttcccaggatacaacagt 9111617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 199 - 323
Target Start/End: Original strand, 30538589 - 30538713
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt-agaggttggaaatatatagaaaa-atggacaaaaaattcacattttttgaaag 296  Q
    ||||||||||||||| | |||||||||||| ||| || || ||||| || ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  30538589 ttaggctttgtttggaagtttggaggggaagggaagg-agggttttgaggggttggaaatatataaaaaaaatggacaaaaaattcacattttttgaaag 30538687  T
Q  297 aacaaattttttagagaatgataaact 323  Q
    |||   ||||||| |||||||||||||    
T  30538688 aac-cgttttttatagaatgataaact 30538713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 17688558 - 17688450
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaact----aatacttatgattaatatac 343  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||||    | || |||||||||||||||    
T  17688558 ggttgaaaatatataaaaaaatggataaaaaattcacattttttgaaagaac-agttttttagagaataataaactagtaagtatttatgattaatatac 17688460  T
Q  344 tttttatttt 353  Q
    |||| |||||    
T  17688459 ttttaatttt 17688450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 938112 - 938221
Alignment:
Q  247 aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaac-taatacttatg---attaatata 342  Q
    |||| |||||||||||||| |||||| |||||||||| ||||||| ||||||| |||||| ||||||||||||||| ||||| |||||   |||||||||    
T  938112 aggtgggaaatatatagaagaatggataaaaaattcatattttttaaaagaac-aattttgtagagaatgataaacttaatatttatgattattaatata 938210  T
Q  343 ctttttatttt 353  Q
    ||||| |||||    
T  938211 cttttaatttt 938221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 285 - 353
Target Start/End: Complemental strand, 14153289 - 14153222
Alignment:
Q  285 attttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| |||||    
T  14153289 attttttgaaagaacaaaatttt-agagaatgataaactaatatttatgattaatatacttttaatttt 14153222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 254 - 353
Target Start/End: Original strand, 36668521 - 36668619
Alignment:
Q  254 aaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||| ||| ||||||| ||||  |||||||||||||||||||||| ||| || || |||||||||||||| ||||||||||||||| |||| |||||    
T  36668521 aaatatacagagaaatggagaaaattttcacattttttgaaagaacaattttatt-gaaaatgataaactaatgcttatgattaatatatttttaatttt 36668619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 347
Target Start/End: Original strand, 9173620 - 9173713
Alignment:
Q  253 gaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||||||||||||||||| | |||  | | ||||||||| ||||||||||||||| ||| |||||||||||||| ||||||||||||||| ||||    
T  9173620 gaaatatatagaaaaatgaaaaaatcaatgacatttttttaaagaacaaattttt-agataatgataaactaatgcttatgattaatatattttt 9173713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 353
Target Start/End: Original strand, 30543264 - 30543333
Alignment:
Q  283 acattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  30543264 acattttttgaaagaataa-ttttttagagaatgataaattaatacttatgattaatatatttttaatttt 30543333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 420 - 545
Target Start/End: Original strand, 4242559 - 4242684
Alignment:
Q  420 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttat 519  Q
    ||||| |||| ||||| ||||||||| ||  ||| |||||| |||||||| |  |||| |||||||||| |||||||||| ||| ||  |||||||||||    
T  4242559 tgttaagtaacctgagacgtgacataatcgttgtccttgaggattttatccgactcatgagcgcatatcctcccaggatacaactgttcttccccgttat 4242658  T
Q  520 gaatcataactgaaggttacagaaca 545  Q
    |||||||||  |||||| ||||||||    
T  4242659 gaatcataatcgaaggtgacagaaca 4242684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 426 - 592
Target Start/End: Complemental strand, 51465606 - 51465452
Alignment:
Q  426 gtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatca 525  Q
    |||||||||||||||||||||||||||| ||||   ||||||||          ||||||||  | |||||||| ||||||  || ||||||||||||||    
T  51465606 gtaatctgaggcgtgacatagtcactgtccttggagattttatc----------gcgcatattcttccaggatacaacagttctttcccgttatgaatca 51465517  T
Q  526 taactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactca 592  Q
    ||   | ||||||||||||| |||||||| |||||  ||||| | ||||||||||||||||||||||    
T  51465516 tactcggaggttacagaacaactcaaatttatctc--agatatcaggagatgtaacccagaaactca 51465452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 1953876 - 1953828
Alignment:
Q  360 aacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  1953876 aacttatcgaatttggttgccgacacagccccatcaaaatcttcacaaa 1953828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 28773257 - 28773350
Alignment:
Q  251 tggaaatatatagaaaaatggacaaaaa--attcacattttttgaaagaacaaattttttagagaatgataaactaatactta-tgattaatata 342  Q
    |||||||||||||||||||||| |||    || ||||||||| |||||||||| ||||||||||||||||||||||||  ||| |||||||||||    
T  28773257 tggaaatatatagaaaaatggaaaaatcttatccacatttttcgaaagaacaa-ttttttagagaatgataaactaatgtttattgattaatata 28773350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 26310517 - 26310467
Alignment:
Q  358 gaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||||||    
T  26310517 gaaacttatcgaatttggttgttgacacagctccatcaaaatcgtcacaaa 26310467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 326
Target Start/End: Complemental strand, 39509031 - 39508906
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagag-gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| |||||||||||  ||| ||||| | ||| | | || ||||||||||||||||||| | |||   ||||||||||| |||||| |    
T  39509031 aggctttgtttgggagtttggaggggaggggaagggagagctttggcgagtgggaaatatatagaaaaatgaaaaaatctttcacatttttggaaagagc 39508932  T
Q  300 aaattttttagagaatgataaactaat 326  Q
    ||| |||||||||||| ||||| ||||    
T  39508931 aaa-tttttagagaatcataaattaat 39508906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 355 - 408
Target Start/End: Original strand, 4242473 - 4242526
Alignment:
Q  355 agtgaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||    
T  4242473 agtgaaacttattgaatttggttgtcgacacaactccatcaaaatcttcgcaaa 4242526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 12141561 - 12141609
Alignment:
Q  360 aacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    ||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  12141561 aacttatcgaatttggttgccgacacatcttcatcaaaatcttcacaaa 12141609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 26345788 - 26345736
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||| |||| ||||||||||||||| || |||||||    
T  26345788 aattttttagagaatgataaattaatgcttatgattaatatatttattatttt 26345736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 41432680 - 41432732
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||| ||||| |||||||||||||||||||| |||| |||||    
T  41432680 aattttttagagaataataaattaatacttatgattaatatatttttaatttt 41432732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 51465693 - 51465645
Alignment:
Q  358 gaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||||    
T  51465693 gaaacttatcgaatttggttgccgacacagctccatc--aatcttcacaaa 51465645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 28748401 - 28748312
Alignment:
Q  252 ggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatata 342  Q
    ||||||||| |||||||| || |||   |||  ||||| |||||||| || ||||| | ||||||||||||||||||||||||||||||||    
T  28748401 ggaaatatacagaaaaattgagaaatctttcgtattttatgaaagaataattttttga-agaatgataaactaatacttatgattaatata 28748312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 42806331 - 42806281
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||| ||||||| |||||||||||||| ||||| ||||||||||    
T  42806331 ttttttagagagtgataaattaatacttatgattgatatattttttatttt 42806281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 304 - 350
Target Start/End: Original strand, 51303096 - 51303142
Alignment:
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttat 350  Q
    |||||||||||||||||| |||| ||||||||||||||| |||||||    
T  51303096 tttttagagaatgataaattaatgcttatgattaatatattttttat 51303142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 9595829 - 9595776
Alignment:
Q  196 aacttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg 249  Q
    |||| ||||||||||||||| |||||||||||| ||||||||| ||||| ||||    
T  9595829 aactaaggctttgtttgggagtttggaggggaagggaggggagggttttggagg 9595776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 576
Target Start/End: Complemental strand, 39197297 - 39197184
Alignment:
Q  464 tttatctgcttcattagcgcatatcatcccaggatataaca-gtcattccccgttatgaatcataactgaaggttacagaacagctcaaattaatctcaa 562  Q
    ||||||||| |||| |||||||||| | |||||||| |||| |||  || ||  |||||||||||   |||||| |||||||| |||||||  |||||||    
T  39197297 tttatctgcctcataagcgcatatcctaccaggatacaacaagtccctctccaatatgaatcatagtcgaaggtgacagaacaactcaaatatatctcaa 39197198  T
Q  563 agataaccggagat 576  Q
    ||||||| ||||||    
T  39197197 agataacaggagat 39197184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 52073356 - 52073428
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||  || ||||||||||||||||||| |||   |||||||||||||| |||| |||||    
T  52073356 ttcacattttttgaaagagtaa-ttttttagagaatgataaattaacgtttatgattaatatatttttaatttt 52073428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 1278632 - 1278580
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||| |||||||||||| |||| ||||||||||||||| |||| |||||    
T  1278632 aattttttggagaatgataaattaatgcttatgattaatatatttttaatttt 1278580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 33579416 - 33579364
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||| |||| ||||||| ||||||| |||| |||||    
T  33579416 aattttttagagaatgataaattaatgcttatgactaatatatttttaatttt 33579364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 34918660 - 34918712
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||| || |||||| ||||||||| ||||||||||||||| ||||||||||    
T  34918660 aattttgtacagaatggtaaactaatgcttatgattaatatattttttatttt 34918712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 36269905 - 36269854
Alignment:
Q  302 attttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||| |||| ||||||||| ||||  ||||||||||    
T  36269905 attttttagagaatgataaattaatgcttatgattgatatgttttttatttt 36269854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 39179315 - 39179272
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgtttt 244  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||    
T  39179315 aggctttgtttgggagtttggaggggaagggaggggagggtttt 39179272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 355
Target Start/End: Complemental strand, 1063487 - 1063445
Alignment:
Q  313 aatgataaactaatacttatgattaatatactttttattttta 355  Q
    ||||||||||||||||||||| |||||||| |||||| |||||    
T  1063487 aatgataaactaatacttatgcttaatatattttttaatttta 1063445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 353
Target Start/End: Complemental strand, 1071125 - 1071083
Alignment:
Q  311 agaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||| |||||||||||||| |||| |||||    
T  1071125 agaatgataaactaatatttatgattaatatatttttaatttt 1071083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 4204700 - 4204750
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| |||||| |||||||| |||| |||| |||||    
T  4204700 ttttttagagaatgataaattaatacatatgattactatatttttaatttt 4204750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 353
Target Start/End: Original strand, 5883528 - 5883574
Alignment:
Q  307 ttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||| ||||||| |||||||||||||||||||| |||| |||||    
T  5883528 ttagagagtgataaattaatacttatgattaatatatttttaatttt 5883574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 43530218 - 43530268
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  43530218 ttttttagagagtgataaattaatgcttatgattaatatatttttaatttt 43530268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 38857909 - 38857977
Alignment:
Q  279 attcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||| ||||||||||||||    ||||||||||||||||||||||||  | |||||| ||||| ||||    
T  38857909 attcatattttttgaaagaatgttttttttagagaatgataaactaatgataatgattcatatattttt 38857977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 39886844 - 39886888
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||||||| |||||| |||||||| |||| ||||    
T  39886844 ttttttagagaatgataaattaatacatatgattattatattttt 39886888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 1e-52; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 49861099 - 49860947
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||| | || |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  49861099 aggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatgggcaaaaaattcacattttttgaaagaac 49861000  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49860999 -aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 49860947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 203 - 353
Target Start/End: Original strand, 47434114 - 47434264
Alignment:
Q  203 gctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcaca-ttttttgaaagaacaa 301  Q
    ||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||      
T  47434114 gctttgtttgggagtttggaggggaagagaggggagggttttggaggttggaaatatatagaaaaatggacaaaaaattcacatttttttgaaagaac-g 47434212  T
Q  302 attttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47434213 gttttttagagaatgataaactaatacttatgattaatatacttttaatttt 47434264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 41961795 - 41961947
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||| ||||| || ||||||||| ||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41961795 aggctttgtatgggagttaggaggggaagggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 41961894  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41961895 -agttttttagagaatgataaactaatacttatgattaatatacttttaatttt 41961947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 198 - 353
Target Start/End: Original strand, 47789261 - 47789416
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||||||||||||||| |||||||||||| ||||||||| | ||| | || |||||||||||||||||||||||||||||||||| |||||||||||     
T  47789261 cttaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcaaattttttgaaaa 47789360  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  47789361 aac-agttttttagaaaatgataaactaatacttatgattaatatacttttaatttt 47789416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 43237555 - 43237401
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    ||||||||||||||||| |||||||||||| ||||| ||| | ||| | || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43237555 ttaggctttgtttgggagtttggaggggaagggaggagagggatttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 43237456  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||   |||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  43237455 ac-ggttttttagagaatgataaactaatacttatgattaataaacttttaatttt 43237401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 196 - 353
Target Start/End: Complemental strand, 38515505 - 38515348
Alignment:
Q  196 aacttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaa 294  Q
    |||| ||||||||||||| |||||||||||||| ||||||||| |||| || || ||| ||||||||||||||||| |||||||||||| ||||||| ||    
T  38515505 aactaaggctttgtttggaaatttggaggggaagggaggggagggtttcagggggttgaaaatatatagaaaaatgaacaaaaaattcatatttttttaa 38515406  T
Q  295 agaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  38515405 agaacaa-ttttttagagaataataaactaatacttatgattaatatacttttaatttt 38515348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 205 - 355
Target Start/End: Original strand, 49682824 - 49682973
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaatt 304  Q
    |||||||| || |||||||||||| ||||||||| | ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||    
T  49682824 tttgtttgtgagtttggaggggaagggaggggagggctttgggggttggaaatatatagaaaaatgaacaaaaaattcacattttttgaaaaaac-attt 49682922  T
Q  305 ttttagagaatgataaactaatacttatgattaatatactttttattttta 355  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  49682923 ttttagataatgataaactaatacttatgattaatatacttttaattttta 49682973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 30121340 - 30121492
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| |||||||||||  ||||||||| | ||| | || |||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  30121340 aggctttgtttgggagtttggaggggaggggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagagc 30121439  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30121440 ag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 30121492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 202 - 354
Target Start/End: Complemental strand, 55445171 - 55445017
Alignment:
Q  202 ggctttgtttgggaatttggaggggaaaggaggggagtgtttt-agaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaac 299  Q
    |||||||||||||| |||||||||||| ||||||||| | | | |  ||||||||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  55445171 ggctttgtttgggagtttggaggggaagggaggggagggctctgatgggttggaaatatatagaaaaatgaacaaaaaaattcacattttttgaatgaac 55445072  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttattttt 354  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  55445071 agtttttttagagaatgataaactaatacttatgattaatatacttttaattttt 55445017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 3042946 - 3043098
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtg-ttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| ||||||||||||  || ||||| | |||  | ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  3042946 aggctttgtttgggagtttggaggggaagagatgggagggctttggggggttggaaatatataaaaaaatggacaaaaaattcacattttttggaagaac 3043045  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3043046 -agttttttagagaatgataaactaatacttatgattaatatacttttaatttt 3043098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 198 - 353
Target Start/End: Complemental strand, 39499464 - 39499309
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaag 296  Q
    |||||||||||||||||| |||||||||||| ||||||||| | ||| | ||||| ||||||||||||||||||| |||||| |||||||||||| ||||    
T  39499464 cttaggctttgtttgggagtttggaggggaagggaggggagggctttgg-ggttgaaaatatatagaaaaatggataaaaaaattcacattttttaaaag 39499366  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||  ||||||| ||||| ||||||||||||||||||||||||||||||| |||||    
T  39499365 aacagtttttttaaagaataataaactaatacttatgattaatatacttttaatttt 39499309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 205 - 353
Target Start/End: Complemental strand, 46017464 - 46017316
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 303  Q
    ||||||||||| |||||||  ||| ||||||||  ||||||| || |||||||||||||||||||| || |||||||||||||||||||||||||| |||    
T  46017464 tttgtttgggagtttggagaagaagggaggggatagttttagggggttggaaatatatagaaaaatagataaaaaattcacattttttgaaagaac-aat 46017366  T
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  46017365 tttttagagaatgataaaataaaacttatgattaatatacttttaatttt 46017316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 230 - 353
Target Start/End: Complemental strand, 23163757 - 23163634
Alignment:
Q  230 ggaggggagtgttttag-aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatac 328  Q
    ||||||||| ||||| | |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  23163757 ggaggggagagttttgggaggttggaaatatatagataaatagacaaaaaattcatattttttgaaagaacaa-ttttttagagaatgataaactaatac 23163659  T
Q  329 ttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| |||||    
T  23163658 ttatgattaatatacttttaatttt 23163634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 230 - 353
Target Start/End: Complemental strand, 25428901 - 25428779
Alignment:
Q  230 ggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatact 329  Q
    ||||||||||||||| | ||||| ||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  25428901 ggaggggagtgttttgggggttgaaaatatatagaaaaaaggataaaaaattcacattttttgaaagaac-agttttttagagaatgataaaataatact 25428803  T
Q  330 tatgattaatatactttttatttt 353  Q
    |||||||||||||||||| |||||    
T  25428802 tatgattaatatacttttaatttt 25428779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 44411972 - 44412125
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaa 298  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||| | || |||||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  44411972 aggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaattgacaaaaaaattcacatttttttaaagaa 44412071  T
Q  299 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||  ||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  44412072 cag-ttttttagagaatgataaattaatacttacgattaatatacttttaatttt 44412125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 47714492 - 47714643
Alignment:
Q  205 tttgtttgggaatttggaggggaaa---ggaggggagtgttttag-aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 300  Q
    ||||||||||| ||||||||||||    ||||||||| | ||| | |||||| |||||||||||||||| |||||||||||||||||||||||||||||     
T  47714492 tttgtttgggagtttggaggggaagaagggaggggagggctttgggaggttgaaaatatatagaaaaatagacaaaaaattcacattttttgaaagaac- 47714590  T
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    | |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  47714591 atttttttagagaatgataagctaatacttatgattaatatacttttaatttt 47714643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 17642852 - 17642700
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttag-aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    |||||||||||| || |||||| | ||| ||||||||| ||||| | ||||||||||||||||||||||| || |||||||||||||||||| ||||||     
T  17642852 aggctttgtttgagagtttggatgagaatggaggggagcgttttcggaggttggaaatatatagaaaaatagataaaaaattcacatttttttaaagaat 17642753  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |  ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  17642752 ag-ttttttagagaatgataaactaatatttatgattaatatacttttaatttt 17642700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 36796688 - 36796535
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagag-gttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaa 298  Q
    ||||||||||||||| ||||||||  || ||||||||| | ||| | | |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  36796688 aggctttgtttgggagtttggaggaaaagggaggggagggctttggggagttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa 36796589  T
Q  299 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||  || |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  36796588 cag-ttatttagagaatgataaactaatatttatgattaatatacttttaatttt 36796535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 43007346 - 43007492
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 300  Q
    |||||||||||| || |||||||||||| ||  ||||| ||||| | |||||||||||||||||||||||||||||||||| |  |||||| ||||||||    
T  43007346 aggctttgtttgagagtttggaggggaaggg--gggagggttttcg-ggttggaaatatatagaaaaatggacaaaaaattta--tttttttaaagaaca 43007440  T
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
      ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43007441 g-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 43007492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 30131752 - 30131856
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||    
T  30131752 ggttggaaaaatatagaaaaatggacaaaaaatttacattttttgaaagagcag-ttttttagagaatgataaactaatacttatgattaatatactttt 30131850  T
Q  348 tatttt 353  Q
     |||||    
T  30131851 aatttt 30131856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 246 - 353
Target Start/End: Complemental strand, 2420876 - 2420770
Alignment:
Q  246 gaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactt 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| | |   |||||||||||||||||||||||||||||||||||||||||||    
T  2420876 gaggttggaaatatatagaaaaatggacaaaaaattcacattttttaaaacagc-ggttttttagagaatgataaactaatacttatgattaatatactt 2420778  T
Q  346 tttatttt 353  Q
    || |||||    
T  2420777 ttaatttt 2420770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 33982605 - 33982709
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| |||| |||||||||||    
T  33982605 ggttggaaatatatagaaaaatggataaaaaattcacattttttgaaagaac-agttttttagagaataataaactaatacttgtgataaatatactttt 33982703  T
Q  348 tatttt 353  Q
     |||||    
T  33982704 aatttt 33982709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 7661254 - 7661147
Alignment:
Q  248 ggttggaaatatatagaaaaatg--gacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactt 345  Q
    ||||||||||||||| |||||    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  7661254 ggttggaaatatataaaaaaaataagacaaaaaattcacattttttgaaagaacaatttttttagagaatgataaactaatacttatgattaacatactt 7661155  T
Q  346 tttatttt 353  Q
    || |||||    
T  7661154 ttaatttt 7661147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 249 - 353
Target Start/End: Complemental strand, 38526367 - 38526264
Alignment:
Q  249 gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttttt 348  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||||||     
T  38526367 gttggaaatatataaaaaaatggataaaaaattcacattttttgaaaaaacag-ttttttagacaatgataaactaatacttatgattaatatactttta 38526269  T
Q  349 atttt 353  Q
    |||||    
T  38526268 atttt 38526264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 209 - 346
Target Start/End: Complemental strand, 34306852 - 34306715
Alignment:
Q  209 tttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttt 307  Q
    ||||||| | |||||||||| |||| |||| ||||| | || |||||||||||||||||||| ||||||||||||| ||||||||||| ||| | |||||    
T  34306852 tttgggagtatggaggggaagggagtggagggttttggggggttggaaatatatagaaaaattgacaaaaaattcagattttttgaaataac-agttttt 34306754  T
Q  308 tagagaatgataaactaatacttatgattaatatacttt 346  Q
    || ||||||||||||||||| ||||||||||||||||||    
T  34306753 tatagaatgataaactaatatttatgattaatatacttt 34306715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 200 - 353
Target Start/End: Complemental strand, 55439849 - 55439695
Alignment:
Q  200 taggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 298  Q
    |||||||||||||||| |||||||||||| ||||||||| | |   | || ||| ||||| ||||||||||| ||||||||||||  ||||||||| |||    
T  55439849 taggctttgtttgggagtttggaggggaagggaggggagggctccggggggttgaaaatacatagaaaaatgcacaaaaaattcaatttttttgaatgaa 55439750  T
Q  299 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |   ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  55439749 cggtttttttagataatgataaactaatacttatgattaatatacttttaatttt 55439695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 196 - 332
Target Start/End: Complemental strand, 45555908 - 45555769
Alignment:
Q  196 aacttaggctttgtttgggaatttggaggggaaaggaggggagtg------ttttagaggttggaaatatatagaaaaatggacaaaaaattcacatttt 289  Q
    |||| ||||||||||||||| |||||||||||| ||| ||||| |      |||  | |||||||||||||  |||||||||||||||||||||||||||    
T  45555908 aactaaggctttgtttgggagtttggaggggaatggaagggaggggagggctttggggggttggaaatata--gaaaaatggacaaaaaattcacatttt 45555811  T
Q  290 ttgaaagaacaaattttttagagaatgataaactaatacttat 332  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  45555810 ttgaaagaac-aattttttagagaatgataaactaatacttat 45555769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 27055778 - 27055863
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatg 333  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  27055778 ggttggaaatatataaaaaaatggacaaaaaatcaacattttttgaaaaaacagtttttttagagaatgataaactaatacttatg 27055863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 261 - 353
Target Start/End: Original strand, 46312298 - 46312390
Alignment:
Q  261 tagaaaaatggacaaaaaattcacatttttt-gaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||| |||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  46312298 tagaaaaatggataaaaaattcacatttttttgaaagaacagatttt-tagagaatgataaactaatatttatgattaatatacttttaatttt 46312390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 450 - 662
Target Start/End: Original strand, 11634190 - 11634402
Alignment:
Q  450 ctgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataaca-gtcattccccgttatgaatcataactgaaggttacagaacagct 548  Q
    ||||||||||| ||||||||  | || | | |||||||| |||||||||| |||| ||| ||||||||||||||||||||||| |||| ||| |||| ||    
T  11634190 ctgttcttgaggattttatccacctcgtaaacgcatatcctcccaggatacaacatgtccttccccgttatgaatcataactgcaggtaacacaacaact 11634289  T
Q  549 caaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatg--agaaaataattatgtgtataaagaaatataaa-tgagagagc 645  Q
    |||||| |||| ||| |||||   ||||| ||| |||||||||| ||||||| |||  ||||||||||  |||||||| ||||| ||||| ||||||||     
T  11634290 caaatttatct-aaaaataacataagatgcaactcagaaactcaatattttg-atgatagaaaataat--tgtgtatagagaaacataaagtgagagagt 11634385  T
Q  646 atatatgtgtatactat 662  Q
    || ||||||||||||||    
T  11634386 atgtatgtgtatactat 11634402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 38593171 - 38593063
Alignment:
Q  248 ggttggaaatatatagaaaaatg----gacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatac 343  Q
    ||||||| |||||||||||||||    || |||||||||||||||||| |||||||   ||||||||||||||||||||||||||||||||||||||| |    
T  38593171 ggttggatatatatagaaaaatgaagagaaaaaaaattcacatttttttaaagaacgg-ttttttagagaatgataaactaatacttatgattaatatgc 38593073  T
Q  344 tttttatttt 353  Q
    |||| |||||    
T  38593072 ttttaatttt 38593063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 268 - 347
Target Start/End: Original strand, 42583183 - 42583263
Alignment:
Q  268 atggacaaaaaattcacattttttgaaagaacaaatttt-ttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||||||||||||||| ||||||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||    
T  42583183 atggacaaaaaattcatattttttgaaagaacagttttttttagagaatgataaactagtacttatgattaatatactttt 42583263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 278 - 353
Target Start/End: Original strand, 31178143 - 31178217
Alignment:
Q  278 aattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||| ||||||||  |||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  31178143 aattcacattttttaaaagaacag-ttttttagtgaatgataaactaatagttatgattaatatacttttaatttt 31178217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 249 - 342
Target Start/End: Original strand, 15499166 - 15499258
Alignment:
Q  249 gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatata 342  Q
    ||||||||||||||||||||| |  |||   |||||||||||||||| |  ||||||| |||||||||||||| ||||||||||||||||||||    
T  15499166 gttggaaatatatagaaaaatagtaaaatctttcacattttttgaaatagtaaatttt-tagagaatgataaaataatacttatgattaatata 15499258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 7302272 - 7302201
Alignment:
Q  276 aaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||| ||||||||||| |||||| |  |||||||||||||||||||  ||||||||||||||||||| ||||    
T  7302272 aaaactcacatttttttaaagaatattttttttagagaatgataaatcaatacttatgattaatatattttt 7302201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 355
Target Start/End: Complemental strand, 30697554 - 30697480
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattttta 355  Q
    ||||||||||||||||||  |  ||||||||||||||||||||||||  |||||||||||||| |||| |||||||    
T  30697554 ttcacattttttgaaagattat-ttttttagagaatgataaactaatgtttatgattaatatatttttaattttta 30697480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 32859012 - 32858941
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||  ||  |||||||||||||||||| ||||||||| |||||||||| |||| |||||    
T  32859012 ttcacattttttgaaagagtaa--tttttagagaatgataaattaatacttacgattaatatatttttaatttt 32858941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 274 - 355
Target Start/End: Complemental strand, 11500292 - 11500211
Alignment:
Q  274 aaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattttta 355  Q
    |||||| ||| ||||||||||||||  | ||||||||||||||||||| ||||  |||| ||||||||| |||||| |||||    
T  11500292 aaaaaaatcatattttttgaaagaatgatttttttagagaatgataaattaatgtttataattaatatattttttaatttta 11500211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 4247280 - 4247228
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  4247280 aattttttagagaatgataaattaatgcttatgattaatatatttttaatttt 4247228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 46891547 - 46891497
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||| |||||    
T  46891547 ttttttagagactgataaattaatacttatgattaatatatttttaatttt 46891497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 353
Target Start/End: Complemental strand, 13638586 - 13638537
Alignment:
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  13638586 tttttagagaatgataaattaatgcttatgattaatatatttttaatttt 13638537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 30132097 - 30132052
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttt 243  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||    
T  30132097 cttaggctttgtttgggaatttggaggggaggggaggggagggttt 30132052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 31651268 - 31651415
Alignment:
Q  205 tttgtttgggaatttggaggggaa-aggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 303  Q
    |||||||||||||||| ||||||  |||||||||| ||||| | ||||| |||||||   |||||||   |||   || | |||||||||||||  || |    
T  31651268 tttgtttgggaatttgaaggggaggaggaggggag-gttttgggggttgaaaatataggaaaaaatgataaaaccttttagattttttgaaagagtaa-t 31651365  T
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||| |||| |||| ||||||||||||||| |||| |||||    
T  31651366 tttttagagaatgttaaattaatgcttatgattaatatatttttaatttt 31651415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 3537473 - 3537433
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggagggga 237  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  3537473 acttaggctttgtttgggagtttggaggggaagggagggga 3537433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 11634076 - 11634124
Alignment:
Q  360 aacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||||    
T  11634076 aacttatcgaatttgattgcagacacagcttcatcaaaatcttcacaaa 11634124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 38593278 - 38593238
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattt 288  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  38593278 ggttggaaatatatagaaaaatggatataaaattcacattt 38593238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 42134608 - 42134660
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||| |||||||||  |||||||||||||| |||| |||||    
T  42134608 aattttttagagaatgctaaactaatgtttatgattaatatatttttaatttt 42134660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 23568242 - 23568180
Alignment:
Q  284 cattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||| || ||||||  ||||||||||| ||||  |||||||||||||||||||    
T  23568242 cattttttgaaagaataacttttttt-agaatgataaattaatgattatgattaatatactttt 23568180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 27681965 - 27681914
Alignment:
Q  302 attttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  27681965 attttttagagagtgataaattaatgcttatgattaatatatttttaatttt 27681914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 38456485 - 38456524
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggag 238  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  38456485 ttaggctttgtttgggagtttggaggggaagggaggggag 38456524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 2420534 - 2420580
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt 244  Q
    |||||||||||||||||| ||| |||||||| ||||||||| |||||    
T  2420534 cttaggctttgtttgggagtttagaggggaatggaggggagggtttt 2420580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 347
Target Start/End: Complemental strand, 29623399 - 29623353
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||| |||||||||||||| ||||||||| ||||| ||||    
T  29623399 aattttttagaaaatgataaactaatgcttatgattcatatattttt 29623353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 47789655 - 47789609
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttaga 247  Q
    ||||||||||||||| |||||||||||| ||||||||| ||| ||||    
T  47789655 aggctttgtttgggagtttggaggggaagggaggggagggttgtaga 47789609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 51686667 - 51686617
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| |||| | |||||||| |||| ||||||||||    
T  51686667 ttttttagagaatgataaattaatgcatatgattactatattttttatttt 51686617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 54748472 - 54748422
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  54748472 ttttttagagagtgataaattaatgcttatgattaatatatttttaatttt 54748422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 1132833 - 1132905
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||  || ||||||||||||||||||| ||||  | ||| |||||||| |||| |||||    
T  1132833 ttcacattttttgaaagagtaa-ttttttagagaatgataaattaatgttcatggttaatatatttttaatttt 1132905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 2927730 - 2927775
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttt 243  Q
    ||||||||||||||| || |||| ||||||| ||||||||||||||    
T  2927730 cttaggctttgtttgcgagtttgcaggggaagggaggggagtgttt 2927775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 40674290 - 40674218
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||  || ||||||||||  |||||||  ||||||| ||||||||||| |||| |||||    
T  40674290 ttcacattttttgaaagag-aatttttttagagtgtgataaatcaatacttgtgattaatatatttttaatttt 40674218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 306 - 354
Target Start/End: Complemental strand, 7965174 - 7965126
Alignment:
Q  306 tttagagaatgataaactaatacttatgattaatatactttttattttt 354  Q
    |||||||||| ||||| ||||  |||||||||||||| |||||||||||    
T  7965174 tttagagaataataaattaatgtttatgattaatatattttttattttt 7965126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 32859105 - 32859065
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggag 238  Q
    |||||||||||||||||| |||||||||||  |||||||||    
T  32859105 cttaggctttgtttgggagtttggaggggaggggaggggag 32859065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 40118827 - 40118871
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||||||||||||| ||||||||| ||||||||| ||||| ||||    
T  40118827 ttttttagagaatggtaaactaatgcttatgattcatatattttt 40118871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 305 - 353
Target Start/End: Original strand, 52620757 - 52620805
Alignment:
Q  305 ttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||| ||||||||||  ||| ||||||||||||||| ||||||||||    
T  52620757 ttttagcgaatgataaatcaatgcttatgattaatatattttttatttt 52620805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 198 - 353
Target Start/End: Complemental strand, 406 - 251
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaa-aaaattcacattttttgaaag 296  Q
    ||||| ||||||||| || |||||||||||| ||||||||| | ||| | |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  406 cttagactttgtttgagagtttggaggggaagggaggggagggctttgggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaag 307  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  306 aac-aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 198 - 353
Target Start/End: Original strand, 2187 - 2342
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggac-aaaaaattcacattttttgaaag 296  Q
    ||||| ||||||||| || |||||||||||| ||||||||| | ||| | |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2187 cttagactttgtttgagagtttggaggggaagggaggggagggctttgggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaag 2286  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2287 aac-aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 2342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 2e-51; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 198 - 353
Target Start/End: Original strand, 4648798 - 4648957
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaag----gaggggagtgtttt-agaggttggaaatatatagaaaaatggacaaaaaattcacattttttg 292  Q
    |||||||||||||||||| |||||||||||| |    |||||||| | ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  4648798 cttaggctttgtttgggagtttggaggggaaggaagggaggggagggctttgaggggttggaaatatatagaaaaatggacaaaaaattcacattttttg 4648897  T
Q  293 aaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4648898 aaagaac-aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 4648957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 1658439 - 1658288
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 300  Q
    |||||||||||| || |||| ||||||| ||||||||| ||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  1658439 aggctttgtttgagagtttgaaggggaagggaggggagggttttgggggttggaaatatatagaaaaatggacaaaatattcacattttttgaaagaac- 1658341  T
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    | |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  1658340 agttttttagagaatgataaactaatacttataattaatatacttttaatttt 1658288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 198 - 353
Target Start/End: Complemental strand, 17093163 - 17093008
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggag-tgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||||||||||||||| |||||||||||| |||||| || | |||  | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17093163 cttaggctttgtttgggagtttggaggggaagggagggaaggtctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 17093064  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| || |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  17093063 aac-aactttttagagaatgataaacttatacttatgattaatatacttttaatttt 17093008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 197 - 346
Target Start/End: Complemental strand, 35701670 - 35701521
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt-agaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 295  Q
    |||||| |||||||||||| |||||||||||  ||||||||| | ||  || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35701670 acttagactttgtttgggagtttggaggggacgggaggggagggcttcgaggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 35701571  T
Q  296 gaacaaattttttagagaatgataaactaatacttatgattaatatacttt 346  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  35701570 gaac-agttttttagagaatgataaactaatacttatgattaatatacttt 35701521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 205 - 353
Target Start/End: Complemental strand, 25027181 - 25027033
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgtttt-agaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 303  Q
    ||||||||||| |||||||||||| ||||||||| | ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||    
T  25027181 tttgtttgggagtttggaggggaagggaggggagggctttgaggggttggaaatatatagaaaaattgacaaaaaattcacattttttgaaagaa-taat 25027083  T
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  25027082 tttttagagaatgataaactaatacttatcattaatatacttttaatttt 25027033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 198 - 353
Target Start/End: Original strand, 25598584 - 25598739
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||||||||||||||| |||||||||||| |||||||||   ||| | || ||| |||||||||||||||||||||||||||||||||||||||||||    
T  25598584 cttaggctttgtttgggagtttggaggggaagggaggggaggactttggcgggttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaag 25598683  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| | |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  25598684 aac-agttttttagagaatgataagctaatacttatgattaatatacttttaatttt 25598739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 38302182 - 38302328
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttag-aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 303  Q
    ||||||||||| |||||||||||| ||||||||| | ||| | ||||||||||||||  ||||||||||||||||||||||||||||||||||||||  |    
T  38302182 tttgtttgggagtttggaggggaagggaggggagggctttgggaggttggaaatata--gaaaaatggacaaaaaattcacattttttgaaagaacag-t 38302278  T
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38302279 tttttagagaatgataaactaatacttatgattaatatacttttaatttt 38302328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 422 - 610
Target Start/End: Complemental strand, 18594940 - 18594752
Alignment:
Q  422 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 521  Q
    |||||||| |||||||||||||| |||||||| |||||  |||||||| || |||| |||||||||  || ||||||| ||||||  |||||||||||||    
T  18594940 ttatgtaacctgaggcgtgacattgtcactgtccttgaagattttatccgcctcataagcgcatattctcacaggatacaacagttcttccccgttatga 18594841  T
Q  522 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgagaaaa 610  Q
    ||||||||||||||| |||||||| |||||||| || ||||||||| | |||||||||||||| ||||||| ||||||  |||||||||    
T  18594840 atcataactgaaggtgacagaacaactcaaatttatgtcaaagatatcaggagatgtaacccaaaaactcaatattttagatgagaaaa 18594752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 200 - 353
Target Start/End: Complemental strand, 33718445 - 33718292
Alignment:
Q  200 taggctttgtttgggaatttggaggggaaaggaggggagtgtttta-gaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 298  Q
    |||||||||||||||| |||||||||||| ||| | ||| | |||  | |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  33718445 taggctttgtttgggagtttggaggggaagggatgagagggctttgtggggttggaaatatatagaaaaatggacaaaaaattcaaattttttaaaagaa 33718346  T
Q  299 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    | | |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  33718345 c-agttttttagagaatgataaactaatacttatgattaatatatttttaatttt 33718292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 252 - 353
Target Start/End: Complemental strand, 35869041 - 35868941
Alignment:
Q  252 ggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatt 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  35869041 ggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaatag-ttttttagagaatgataaactaatacttatgattaatatacttttaatt 35868943  T
Q  352 tt 353  Q
    ||    
T  35868942 tt 35868941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 249 - 353
Target Start/End: Complemental strand, 32760972 - 32760867
Alignment:
Q  249 gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaatttttt-agagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |  |||||| |||||||||||||||||||||||||||||||||||||||    
T  32760972 gttggaaatatatagaaaattggacaaaaaattcacattttttgaaagaatatttttttttagagaatgataaactaatacttatgattaatatactttt 32760873  T
Q  348 tatttt 353  Q
     |||||    
T  32760872 aatttt 32760867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 198 - 353
Target Start/End: Complemental strand, 10295752 - 10295594
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtg-ttttagaggttggaaatatatagaaaaatggac-aaaaaattcacattttttgaaa 295  Q
    |||||||||||||||||| |||||||||||| ||||||||| | |||  | ||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  10295752 cttaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttgaaaatatatagaaaaatagacaaaaaaattcacattttttgaaa 10295653  T
Q  296 gaacaaattttttagagaatgataaactaatact--tatgattaatatactttttatttt 353  Q
    |||  | |||| ||||||||||||||||||||||  |||||||||||||||||| |||||    
T  10295652 gaa-tagttttgtagagaatgataaactaatacttatatgattaatatacttttaatttt 10295594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 198 - 347
Target Start/End: Original strand, 38120010 - 38120158
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||||||||||||||| |||||||||||| ||||||||| | ||| | || |||||||||||||||||||||||||||| ||||||||||    |||     
T  38120010 cttaggctttgtttgggagtttggaggggaagggaggggagagctttggggggttggaaatatatagaaaaatggacaaaatattcacatttaaaaaaaa 38120109  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||| | ||||||||| ||||||||||||||| |||||||||||||||||||    
T  38120110 aac-agttttttaga-aatgataaactaataattatgattaatatactttt 38120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 256 - 353
Target Start/End: Original strand, 27480047 - 27480142
Alignment:
Q  256 atatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  27480047 atatatagaaaaatggacaaaaaaatcacattttt-gaaagaacaa-ttttttagagaatgataaactaatacatatgattaatatacttttaatttt 27480142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 26149819 - 26149714
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttt 346  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||  |  ||||||||||||||||||||||||| |||||||| |||||||||    
T  26149819 ggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagattag-ttttttagagaatgataaactaatatttatgattgatatacttt 26149721  T
Q  347 ttatttt 353  Q
    | |||||    
T  26149720 taatttt 26149714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 248 - 335
Target Start/End: Complemental strand, 41638584 - 41638498
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgat 335  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||||||| |||||||    
T  41638584 ggttggaaatatatagaaaaatggacaaaaaattcacatttttttaaagaac-agttttttaaagaatgataaactaatagttatgat 41638498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 230 - 353
Target Start/End: Complemental strand, 2021214 - 2021091
Alignment:
Q  230 ggaggggagtgttttagaggttggaaatatatagaaaaa-tggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatac 328  Q
    ||||||||| | ||| | ||||||||||||||| ||||| | || |||||||||| ||| ||||||||||||  ||||||||||||||||||| |||||     
T  2021214 ggaggggagggctttgggggttggaaatatataaaaaaaattgataaaaaattcatattgtttgaaagaacag-ttttttagagaatgataaattaatat 2021116  T
Q  329 ttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| |||||    
T  2021115 ttatgattaatatacttttaatttt 2021091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 422 - 592
Target Start/End: Complemental strand, 39292224 - 39292061
Alignment:
Q  422 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 521  Q
    |||| ||| |||||| |||| ||||||||||| ||| || |||||||| || |||| |||||||||| | |||| ||| ||||||  ||| |||||||||    
T  39292224 ttatctaacctgaggtgtgatatagtcactgtccttaaggattttatccgcctcataagcgcatatccttccagaatacaacagttcttctccgttatga 39292125  T
Q  522 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactca 592  Q
    |||||       ||| ||| |||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  39292124 atcat-------ggtgacataacaactcaaaataatctcaaagataaccggagatgtaacccagaagctca 39292061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 248 - 332
Target Start/End: Original strand, 37508224 - 37508308
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcaca-ttttttgaaagaacaaattttttagagaatgataaactaatacttat 332  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||| |||||||    
T  37508224 ggttggaaatatatagaaaaatggacaaaaaattcacattttttttaaagaac-agttttttagagaataataaactagtacttat 37508308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 420 - 607
Target Start/End: Original strand, 26703007 - 26703195
Alignment:
Q  420 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataaca-gtcattccccgtta 518  Q
    |||||||||| |||| ||||||| |||||||||| |||||| |||||||| || |||| | |||||||| ||||| |||| |||| ||  ||| | | ||    
T  26703007 tgttatgtaacctgatgcgtgacttagtcactgtccttgaggattttatccgcctcataaacgcatatcctcccaagatacaacaagttcttctctggta 26703106  T
Q  519 tgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgaga 607  Q
    ||||||| ||| | |||| ||||||||| ||||||| |||||| ||||| |  |||||||||||   ||||||| ||||||| ||||||    
T  26703107 tgaatcaaaaccggaggtgacagaacagttcaaatttatctcacagatatcaagagatgtaacctgtaaactcaatattttggatgaga 26703195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 420 - 607
Target Start/End: Original strand, 26972740 - 26972928
Alignment:
Q  420 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataaca-gtcattccccgtta 518  Q
    |||||||||| |||| ||||||| |||||||||| |||||| |||||||| || |||| | |||||||| ||||| |||| |||| ||  ||| | | ||    
T  26972740 tgttatgtaacctgatgcgtgacttagtcactgtccttgaggattttatccgcctcataaacgcatatcctcccaagatacaacaagttcttctctggta 26972839  T
Q  519 tgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgaga 607  Q
    ||||||| ||| | |||| ||||||||| ||||||| |||||| ||||| |  |||||||||||   ||||||| ||||||| ||||||    
T  26972840 tgaatcaaaaccggaggtgacagaacagttcaaatttatctcacagatatcaagagatgtaacctgtaaactcaatattttggatgaga 26972928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 197 - 353
Target Start/End: Original strand, 9684605 - 9684761
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 295  Q
    ||||||||||||||||||| |||||||||||| ||| ||||  | ||  |||| |||||||||||  | |||||||  |||   | ||||||||||||||    
T  9684605 acttaggctttgtttgggagtttggaggggaagggaagggaaggcttaggagggttggaaatataggggaaaatgggaaaatcttccacattttttgaaa 9684704  T
Q  296 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||  || ||||||||| ||||||||| |||| ||||||||||||||| |||| |||||    
T  9684705 gagtaa-ttttttagaaaatgataaattaatgcttatgattaatatatttttaatttt 9684761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 41695138 - 41695088
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  41695138 ttttttagagaatgataaattaatacttatgattaatatacttttgatttt 41695088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 13293902 - 13293954
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  13293902 aatttttaagagaatgataaattaatacttatgattaatatattttttatttt 13293954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 19389726 - 19389798
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||| |||||||||||  || ||||||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  19389726 ttcacaatttttgaaagattaa-ttttttagagaatgataaattaatgcttatgattaatatatttttaatttt 19389798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 27350888 - 27350977
Alignment:
Q  264 aaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattttt 354  Q
    ||||||||  |||||| ||||||||||| |||||  || |||||||||||| |||||| ||||  |||||||||||||| |||||| ||||    
T  27350888 aaaaatggtaaaaaaaatcacatttttttaaagagtaa-ttttttagagaacgataaattaatgattatgattaatatattttttaatttt 27350977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 39012013 - 39011942
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||  |  ||||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  39012013 ttcacattttttgaaagatga--ttttttagagagtgataaattaatgcttatgattaatatatttttaatttt 39011942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 7398664 - 7398724
Alignment:
Q  265 aaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaat 326  Q
    |||||||  ||||||||||||||||||| |||| | ||||||||||||||||||||| ||||    
T  7398664 aaaatggtaaaaaaattcacattttttgtaaga-ctaattttttagagaatgataaattaat 7398724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 353
Target Start/End: Complemental strand, 28154850 - 28154801
Alignment:
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  28154850 tttttagagaatgataaattaatgtttatgattaatatattttttatttt 28154801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 6044694 - 6044650
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||    
T  6044694 ttttttagagaatgataaactaatacttatcattcatatattttt 6044650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 355
Target Start/End: Complemental strand, 6373319 - 6373247
Alignment:
Q  283 acattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattttta 355  Q
    |||||||||||||||  |  ||||||||| | ||||||| |||||||||||||||||| | |||||| |||||    
T  6373319 acattttttgaaagagtatgttttttagaaagtgataaattaatacttatgattaatacattttttaatttta 6373247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 353
Target Start/End: Complemental strand, 6491341 - 6491295
Alignment:
Q  307 ttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  6491341 ttagagaatgataaattaatgcttatgattaatatatttttaatttt 6491295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 17668032 - 17668093
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatata 342  Q
    ||||||||||||||||| |  |||||||||| |||||||||| |||| |||||| ||||||||    
T  17668032 ttcacattttttgaaag-agtaattttttagggaatgataaattaatgcttatgcttaatata 17668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 1935276 - 1935231
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttt 243  Q
    ||||||||||||||| || |||||||||||| ||||||||| ||||    
T  1935276 cttaggctttgtttgcgagtttggaggggaagggaggggagagttt 1935231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 15399998 - 15399926
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||| |||||| ||| |||||||||||||| || | ||||  |||||||||||||| |||| |||||    
T  15399998 ttcacatttttcgaaagagcaa-ttttttagagaatgctagattaatttttatgattaatatatttttaatttt 15399926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 35042387 - 35042315
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||| |||||||||||||  |||||||||||||||||||||| ||||  ||||||| | |||| |||| |||||    
T  35042387 ttcatattttttgaaagat-aaattttttagagaatgataaattaatgtttatgatcactatatttttaatttt 35042315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 5696501 - 5696541
Alignment:
Q  302 attttttagagaatgataaactaatacttatgattaatata 342  Q
    ||||| |||||||||||||||||||  ||||||||||||||    
T  5696501 attttgtagagaatgataaactaatgtttatgattaatata 5696541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 8944206 - 8944154
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttattttta 355  Q
    ||||||||||||||||||| |||| | |||||||| |||| |||| |||||||    
T  8944206 ttttttagagaatgataaattaatgcatatgattactatatttttaattttta 8944154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 13450630 - 13450586
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||||||||||||||||||||||| || |||||| ||||| ||||    
T  13450630 ttttttagagaatgataaactaatgctcatgattcatatattttt 13450586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 22114916 - 22114848
Alignment:
Q  253 gaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaa 321  Q
    |||||| ||||||||||||| |||   |||||||||||| |||||  |  |||||||||||||||||||    
T  22114916 gaaatacatagaaaaatggagaaatctttcacatttttttaaagagtattttttttagagaatgataaa 22114848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 28523801 - 28523730
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 352  Q
    |||| ||||||||||||||  | ||||||| ||||||||||| ||||  |||||||||||||| |||| ||||    
T  28523801 ttcatattttttgaaagaatga-ttttttaaagaatgataaattaatgtttatgattaatatatttttaattt 28523730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0636 (Bit Score: 102; Significance: 3e-50; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 8654 - 8502
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgtttt-agaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||  ||||||||||||  |||||||| | ||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8654 aggctttgtttgggggtttggaggggaagagaggggagggctttgaggggttggaaatatatacaaaaatggacaaaaaattcacattttttgaaagaac 8555  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8554 -aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 8502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 4e-49; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 198 - 352
Target Start/End: Complemental strand, 20534193 - 20534039
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaa-aaaattcacattttttgaaag 296  Q
    |||||||||||||||||| |||||||||||| ||||||||| | ||| | |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20534193 cttaggctttgtttgggagtttggaggggaagggaggggagggctttgggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaag 20534094  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 352  Q
    |||   |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  20534093 aac-cgttttttagagaatgataaactaatacttatgattaacatacttttaattt 20534039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 41844700 - 41844546
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    ||||||||||||||||| |||||||||||| |||||||||   ||| | || ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41844700 ttaggctttgtttgggagtttggaggggaagggaggggaggactttggggggttggaaacatatagaaaaatggacaaaaaattcacattttttgaaaga 41844601  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    || ||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  41844600 ac-aattttttagagaatgataaattaatacttatgattaatatacttttaatttt 41844546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 38366291 - 38366138
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 298  Q
    ||||||||||||||||| ||||||| |||| ||||||||| | ||| | |||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  38366291 ttaggctttgtttgggagtttggagaggaagggaggggagggctttgggggttggaaatatatagaaaaattgacaaaaaattcacattttttgaaaaaa 38366192  T
Q  299 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    || | ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  38366191 caga-tttttagagaatgataaactaatacttatgattaatatatttttaatttt 38366138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 32648822 - 32648974
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||  |||||||||||| ||||||||| ||||| | || |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32648822 aggctttgtttgggggtttggaggggaagggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagagc 32648921  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     | |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  32648922 -agttttttagagaatgataaactaatacttatgattaatatatttttaatttt 32648974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 353
Target Start/End: Complemental strand, 17873463 - 17873307
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 295  Q
    ||||||||||||||||| | |||||||||||| |||| ||||  |||| | || ||||||||||||||||||||| |||||||||||| ||||||| |||    
T  17873463 acttaggctttgtttggaagtttggaggggaagggagaggagaattttggggggttggaaatatatagaaaaatgcacaaaaaattcatatttttttaaa 17873364  T
Q  296 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17873363 gaacaa-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 17873307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 198 - 353
Target Start/End: Complemental strand, 24280177 - 24280022
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggtt-ggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||||||||||||||| ||| |||||||| ||||||||  | ||| | | || |||||||||||||||||||||||||||||||||||||||||||||    
T  24280177 cttaggctttgtttgggagtttcgaggggaagggaggggaaagctttggggatttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 24280078  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| | |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  24280077 aac-agttttttagagaatgataaactaattcttatgattaatatacttttaatttt 24280022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 32060909 - 32060757
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| ||||||| |||| ||||||||| | ||| | || |||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  32060909 aggctttgtttgggagtttggagtggaagggaggggagggctttggggggttggaaatatatagaaaaatagacaaaaaattcacattttttgaaaaaac 32060810  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     | ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  32060809 -agttttttagagaatgataaattaatacttatgattaatatacttttaatttt 32060757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 198 - 353
Target Start/End: Original strand, 3126827 - 3126982
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||| ||||||||||| |||||||||||| ||| ||||| | ||| | || ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  3126827 cttaggttttgtttgggagtttggaggggaagggaagggagagctttggggggttgaaaatatatacaaaaatggacaaaaaattcacattttttgaaag 3126926  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  3126927 aac-agttttttagataatgataaactaatacttatgattaatatacttttaatttt 3126982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 24291651 - 24291496
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggagggga-gtgttttagaggtt-ggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    ||||||||||||||| | |||||||| ||| |||||||| | | ||| | |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24291651 ttaggctttgtttggaagtttggaggtgaagggaggggaagagctttgggggtttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 24291552  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| |  |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24291551 aac-agctttttagagaatgataaactaatacttatgattaatatacttttaatttt 24291496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 36151189 - 36151340
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 300  Q
    ||||||| ||||||| |||||||||||| |||||||||   ||| || |||| |||||||||||||||||||||||||||||||||||||||||||||      
T  36151189 aggctttatttgggagtttggaggggaagggaggggaggactttggaagttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa-t 36151287  T
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    | ||||||||| ||||||||||||||||||||||||||||||| ||| |||||    
T  36151288 agttttttagaaaatgataaactaatacttatgattaatatacatttaatttt 36151340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 230 - 353
Target Start/End: Original strand, 38317075 - 38317198
Alignment:
Q  230 ggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatac 328  Q
    ||||||||| | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  38317075 ggaggggagggctttaggggcttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-agttttttagagaatgataaactaatac 38317173  T
Q  329 ttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| |||||    
T  38317174 ttatgattaatatacttttaatttt 38317198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 17622295 - 17622442
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 303  Q
    ||||||||||| |||||||||||| ||||||||| | ||| | || |||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  17622295 tttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-agt 17622393  T
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||||||  ||||| |||||||||||| |||||    
T  17622394 tttttagagaatgataaactaata-atatgactaatatacttttaatttt 17622442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 197 - 353
Target Start/End: Complemental strand, 904470 - 904308
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaagg------aggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacatttt 289  Q
    ||||||||||||||||||| |||||||||| ||||      ||||||| | ||| | || ||||||||||||||||||||||||||| ||||||||||||    
T  904470 acttaggctttgtttgggagtttggagggggaagggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaataattcacatttt 904371  T
Q  290 ttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  904370 ttgaaagaatag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 904308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 431 - 622
Target Start/End: Original strand, 6667720 - 6667911
Alignment:
Q  431 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 530  Q
    |||||||||||||||||||||||||||||| |||||||| || |||| |||||||||| |||||||||| ||||||  |||||||||||||||||||||     
T  6667720 ctgaggcgtgacatagtcactgttcttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataacc 6667819  T
Q  531 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtat--gagaaaataattatgtgta 622  Q
    | |||| ||||||||||||||||  |||||  ||||| | ||||||||||||||  || ||| ||| ||| ||  |||||||||| ||||||||    
T  6667820 ggaggtgacagaacagctcaaatatatctc--agatatcaggagatgtaacccatgaattcaatatattggatgagagaaaataagtatgtgta 6667911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 7182009 - 7182161
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttaga-----ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||| |||||||||||| ||||||||| ||| || |     ||||  |||||||||||||||||||||||||||||||||||||||||||||     
T  7182009 tttgtttgggagtttggaggggaagggaggggagggttatatatggggggttaaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa- 7182107  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
       ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7182108 tggttttttagagaatgataaactaatacttatgattaatatacttttaatttt 7182161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 49404489 - 49404593
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||    
T  49404489 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaaaac-agttttttagagaatgataaactattacttatgattaatatactttt 49404587  T
Q  348 tatttt 353  Q
     |||||    
T  49404588 aatttt 49404593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 205 - 355
Target Start/End: Complemental strand, 16535950 - 16535801
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 303  Q
    ||||||||||| |||||| ||||| ||||||||| | ||| | |  |||||||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  16535950 tttgtttgggagtttggatgggaagggaggggagggctttggggtattggaaatatatagaaaaatggacaaaaaattcacattttttgaaagagc-tat 16535852  T
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttattttta 355  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  16535851 tttttagagaatgataaactaatacttataattaatat-ctttttaatttta 16535801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 199 - 347
Target Start/End: Original strand, 32948342 - 32948491
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    ||||| |||||||| |  |||||||||||| ||||| ||| ||||| | || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32948342 ttaggttttgtttgagtgtttggaggggaagggaggagagagttttggggggttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 32948441  T
Q  298 acaaattttttagagaatg-ataaactaatacttatgattaatatactttt 347  Q
    || | |||||||||||||| |||| ||||||||||||||||||||||||||    
T  32948442 ac-agttttttagagaatgaataatctaatacttatgattaatatactttt 32948491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 37756537 - 37756693
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagag-----gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 295  Q
    ||||||||||||| | |||||||||||| ||||||||| | ||| | |     |||||||||||||| ||||||||||||||||||||  ||||||||||    
T  37756537 aggctttgtttggaagtttggaggggaagggaggggagggctttggggtggtggttggaaatatatacaaaaatggacaaaaaattcaatttttttgaaa 37756636  T
Q  296 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||  || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  37756637 gaacag-ttctttagagaatgataaactaatacttatgattaatatacttttaatttt 37756693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 41363630 - 41363782
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    |||||||||||| || |||||||| ||| ||||||||| | ||| | || ||  |||||||||||||||| || ||||||||||||||||||||||||||    
T  41363630 aggctttgtttgagagtttggaggcgaagggaggggagggctttggggggttaaaaatatatagaaaaattgataaaaaattcacattttttgaaagaac 41363729  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |  ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  41363730 ag-ttttttacagaatgataaactaatacttatgattaatatacttttaatttt 41363782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 341
Target Start/End: Complemental strand, 13270241 - 13270106
Alignment:
Q  206 ttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaatt 304  Q
    |||||||||| ||||||||| || ||||| ||| | ||| | || |||||||||||||||||||||||||||||||||| ||||||| ||||||| | ||    
T  13270241 ttgtttgggagtttggagggaaagggaggagagggctttggggggttggaaatatatagaaaaatggacaaaaaattcatatttttttaaagaac-agtt 13270143  T
Q  305 ttttagagaatgataaactaatacttatgattaatat 341  Q
    |||||||||||||||||||||||||||||||||||||    
T  13270142 ttttagagaatgataaactaatacttatgattaatat 13270106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 254 - 353
Target Start/End: Complemental strand, 47670019 - 47669921
Alignment:
Q  254 aaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||| ||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  47670019 aaatatatagtaaaattgacaaaaaattcacattttttgaaagaataaattttt-agagaatgataaactaatacttatgattaatatacttttaatttt 47669921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 422 - 601
Target Start/End: Original strand, 13010525 - 13010703
Alignment:
Q  422 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 521  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| ||| |||||||||||||  ||| |||||| ||    
T  13010525 ttatataacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcctaggatataacagttcttctccgttacga 13010624  T
Q  522 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgt 601  Q
    |||||||| | | || |||||||| |||||||  |||||| ||||| | | |||||||||||| ||||||| ||||||||    
T  13010625 atcataac-ggatgtgacagaacaactcaaatatatctcagagatatcagaagatgtaacccaaaaactcaatattttgt 13010703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 31530288 - 31530130
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattt----tttga 293  Q
    |||||||||||||| || |||||||||||| ||||||||| | ||| | || ||  ||||||||||||||||||||||||||||||  |||    |||||    
T  31530288 ttaggctttgtttgagagtttggaggggaagggaggggagggctttggggggttaaaaatatatagaaaaatggacaaaaaattcattttttttgtttga 31530189  T
Q  294 aagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  31530188 aagaac-agttttttagagaatgataaattaatacttatgattaatatacttttaatttt 31530130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 274 - 353
Target Start/End: Complemental strand, 23708325 - 23708247
Alignment:
Q  274 aaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23708325 aaaaaattcacattttttgaaagaacaa-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 23708247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 270 - 353
Target Start/End: Original strand, 48830702 - 48830784
Alignment:
Q  270 ggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48830702 ggacaaaaaattcacattttttgaaagaacag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 48830784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 21295940 - 21296062
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttag-aggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaa 302  Q
    ||||||||||| |||||||||||| |||||  || ||||| | |||||||||||||||||||||||||| |||||| || |||||||||||||||||  |    
T  21295940 tttgtttgggagtttggaggggaagggaggttagggttttgggaggttggaaatatatagaaaaatggataaaaaattttacattttttgaaagaac--a 21296037  T
Q  303 ttttttagagaatgataaactaata 327  Q
    |||||||||||||||||||||||||    
T  21296038 ttttttagagaatgataaactaata 21296062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 22558991 - 22558888
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||||||| | ||| ||| |||| ||||||||||||||||||||||||||||||||    
T  22558991 ggttggaaatatatagaaaaatggataaaaaattcatatttttt-aaagaac-agtttcttaaagaacgataaactaatacttatgattaatatactttt 22558894  T
Q  348 tatttt 353  Q
     |||||    
T  22558893 aatttt 22558888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 199 - 353
Target Start/End: Original strand, 52594437 - 52594596
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatg----gacaaaaaa--ttcacattttttg 292  Q
    |||| |||||||||||| |||| |||||||||| ||||||   ||| ||||||| ||||||||| |||||      |||||||||  |||| ||||||||    
T  52594437 ttagactttgtttgggagtttgaaggggaaagggggggaggactttcgaggttgaaaatatataaaaaaaaaaaaagacaaaaaaaattcatattttttg 52594536  T
Q  293 aaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  52594537 aaagaacag-tttcttagagaatgataaactaatacttatgattaatatacttttaatttt 52594596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 204 - 330
Target Start/End: Complemental strand, 50643083 - 50642953
Alignment:
Q  204 ctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-----ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 298  Q
    |||||||||||| |||||||||||| ||| ||||| | ||| | ||     ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  50643083 ctttgtttgggagtttggaggggaagggatgggagggctttggggggtttgttggaaatatataaaaaaatagacaaaaaattcacattttttgaaagaa 50642984  T
Q  299 caaattttttagagaatgataaactaatactt 330  Q
    | | ||||||||| ||||||||||||||||||    
T  50642983 c-agttttttagaaaatgataaactaatactt 50642953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 431 - 584
Target Start/End: Original strand, 6671392 - 6671537
Alignment:
Q  431 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 530  Q
    |||||||||||||||||||| || |||||| |||||||| || ||      ||||||| |||||||||| ||||||  |||||||||||||||||||||     
T  6671392 ctgaggcgtgacatagtcaccgtccttgaggattttatccgcctc------gcatatcctcccaggatacaacagttcttccccgttatgaatcataacc 6671485  T
Q  531 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaaccca 584  Q
    | |||| ||||||||||||||||  |||||  ||||| | ||||||||||||||    
T  6671486 ggaggtgacagaacagctcaaatatatctc--agatatcaggagatgtaaccca 6671537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 249 - 352
Target Start/End: Original strand, 21730192 - 21730296
Alignment:
Q  249 gttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaa-gaacaaattttttagagaatgataaactaatacttatgattaatatacttt 346  Q
    |||||||||||||||||||||| | |||||| ||||| |||||| ||| |||||  |||||||||||||||||||||||||||||||||||||||| |||    
T  21730192 gttggaaatatatagaaaaatgaataaaaaaattcacttttttttaaaagaacag-ttttttagagaatgataaactaatacttatgattaatatatttt 21730290  T
Q  347 ttattt 352  Q
    | ||||    
T  21730291 taattt 21730296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 411 - 488
Target Start/End: Original strand, 20058084 - 20058161
Alignment:
Q  411 aacacactatgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatc 488  Q
    |||||||  |||||||||| ||||||||||||||||||||||| |||||| |||||||| || |||||||||| ||||    
T  20058084 aacacacactgttatgtaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcattagcgcgtatc 20058161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 44643579 - 44643471
Alignment:
Q  420 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttat 519  Q
    ||||| |||| ||||||||||||||||||||||| ||| ||| || |||| || |||| |||||||||| ||| |||||| ||||||  ||||||| |||    
T  44643579 tgttaagtaacctgaggcgtgacatagtcactgtccttcaga-ttctatccgcctcataagcgcatatcctcctaggatacaacagttcttccccgatat 44643481  T
Q  520 gaatcataac 529  Q
    ||||||||||    
T  44643480 gaatcataac 44643471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 420 - 527
Target Start/End: Complemental strand, 895570 - 895463
Alignment:
Q  420 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttat 519  Q
    |||||| ||| ||||| ||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||||||| || |||  |||||   |||    
T  895570 tgttatctaacctgagtcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaaagttcttccctaatat 895471  T
Q  520 gaatcata 527  Q
    ||||||||    
T  895470 gaatcata 895463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 360 - 408
Target Start/End: Complemental strand, 44643660 - 44643612
Alignment:
Q  360 aacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  44643660 aacttatcgaatttggttgccgacaaagctccatcaaaatcttcacaaa 44643612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 341
Target Start/End: Original strand, 24662613 - 24662705
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatat 341  Q
    |||||||||||||||| |||||||  |||   |||||||||| |||||||  || |||||||||||||||||||  ||| ||||||||||||||    
T  24662613 ggttggaaatatataggaaaatggtaaaatctttcacattttctgaaagagtaa-ttttttagagaatgataaatcaatgcttatgattaatat 24662705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 38957465 - 38957509
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  38957465 ttttgtagagaatgataaactaatacttatgattaatatattttt 38957509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 52671200 - 52671267
Alignment:
Q  285 attttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 352  Q
    ||||||||||||  ||| ||||||| |||||||||||||||| | ||||||||||||| |||| ||||    
T  52671200 attttttgaaagtgcaatttttttatagaatgataaactaatgcgtatgattaatataattttaattt 52671267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 53013764 - 53013698
Alignment:
Q  286 ttttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||| ||||| ||||||||||||||||||| ||||  |||||||||||||| |||| |||||    
T  53013764 ttttttgaaaaaacaa-ttttttagagaatgataaattaatgtttatgattaatatatttttaatttt 53013698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 48417531 - 48417581
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||| ||||||| |||| |||||||| |||||||||||||||||    
T  48417531 ttttttagagagtgataaattaatgcttatgatcaatatactttttatttt 48417581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 49936663 - 49936613
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  49936663 ttttttagagaatgataaattaatgcttatgattaatatatttttaatttt 49936613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 51431105 - 51431055
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||| |||||    
T  51431105 ttttttagagaatgataaagtaatatttatgattaatatatttttaatttt 51431055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 349
Target Start/End: Original strand, 8828108 - 8828176
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttttta 349  Q
    ||||||||||| ||| || ||| ||||||||||||||||||| ||||  |||||||||||||| ||||||    
T  8828108 ttcacatttttcgaatgagcaa-ttttttagagaatgataaattaatgtttatgattaatatatttttta 8828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 22845046 - 22845087
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggaggggag 238  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  22845046 acttaggctttgtttgggagtttggaggggaagggaggggag 22845087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 31340951 - 31340878
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||| |||||||||  |  ||||||||||||||||||| ||  |||||| ||||||||| ||||||||||    
T  31340951 ttcacattatttgaaagagtattttttttagagaatgataaattagaacttataattaatatattttttatttt 31340878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 40422970 - 40423043
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||| |||||||||||  |  ||||||||||| ||||||| ||||| |||||||||||||| |||| |||||    
T  40422970 ttcacaatttttgaaagagtattttttttagagagtgataaattaatatttatgattaatatatttttaatttt 40423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 46669842 - 46669915
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||| |||||  |  ||||||||||||||||||| | || ||||||||||||||| |||| |||||    
T  46669842 ttcacatttttttaaagagtattttttttagagaatgataaatttatgcttatgattaatatatttttaatttt 46669915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 314 - 355
Target Start/End: Complemental strand, 54806621 - 54806580
Alignment:
Q  314 atgataaactaatacttatgattaatatactttttattttta 355  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  54806621 atgataaactaatacttatgattaatatgctttttaatttta 54806580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 356
Target Start/End: Original strand, 15451235 - 15451310
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttttag 356  Q
    ||||||||||||||||||  || ||||||| | ||||||||| |||| ||||||||||||||| || | ||||||||    
T  15451235 ttcacattttttgaaagagtaa-ttttttaaataatgataaattaatgcttatgattaatatatttctaatttttag 15451310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 274 - 353
Target Start/End: Original strand, 4441914 - 4441993
Alignment:
Q  274 aaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||| ||||||||||| |||||  |   |||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  4441914 aaaaaaatcacattttttaaaagagtattatttttagagagtgataaattaatgcttatgattaatatatttttaatttt 4441993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 7182404 - 7182357
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt 244  Q
    ||||||||||||||||||| |||||||||||  ||||||||| |||||    
T  7182404 acttaggctttgtttgggagtttggaggggaggggaggggagggtttt 7182357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 351
Target Start/End: Complemental strand, 9021117 - 9021047
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatt 351  Q
    |||||||||||| |||||  || |||||||||| |||||||| |||| |||||| |||||||| ||||||||    
T  9021117 ttcacattttttaaaagattaa-ttttttagagtatgataaattaatgcttatggttaatatattttttatt 9021047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 607
Target Start/End: Original strand, 20058180 - 20058239
Alignment:
Q  548 tcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgaga 607  Q
    ||||| |||||  |||||||||||||||||||||| ||||||||| || |||| ||||||    
T  20058180 tcaaaataatcataaagataaccggagatgtaacctagaaactcaataatttggatgaga 20058239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 347
Target Start/End: Original strand, 46176835 - 46176901
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||||||  |  ||||||||||||||||||||||||  |||||||| ||||| ||||    
T  46176835 ttcacattttttgaaagagtat-ttttttagagaatgataaactaatggttatgattcatatattttt 46176901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 38365901 - 38365947
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttaga 247  Q
    ||||||||||||||| |||||||||||  ||||||||| ||||||||    
T  38365901 aggctttgtttgggagtttggaggggaggggaggggagagttttaga 38365947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 50640333 - 50640256
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaat 326  Q
    |||||||||||| |||||||||| | |||   ||| ||||||| |||||||| ||||||| ||||||||||||| ||||    
T  50640333 ggttggaaatatgtagaaaaatgaaaaaatctttctcatttttcgaaagaac-aatttttaagagaatgataaattaat 50640256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 54806344 - 54806390
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt 244  Q
    |||||||||||||||||| ||||||| |||| ||||||||| |||||    
T  54806344 cttaggctttgtttgggagtttggagaggaagggaggggagggtttt 54806390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 27485160 - 27485233
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||| |||||  || | ||||||| |||||||||  ||| ||||||||||||||| |||| |||||    
T  27485160 ttcacatttttttaaagagtaattattttagaaaatgataaatgaatgcttatgattaatatatttttaatttt 27485233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 24682914 - 24682966
Alignment:
Q  302 attttttagagaatgataaact-aatacttatgattaatatactttttatttt 353  Q
    |||||||||| ||||||||| | ||| ||||||||||||||| ||||||||||    
T  24682914 attttttagataatgataaatttaatgcttatgattaatatattttttatttt 24682966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 31340658 - 31340702
Alignment:
Q  200 taggctttgtttgggaatttggaggggaaaggaggggagtgtttt 244  Q
    |||||||||||||||| |||||||||||| ||| ||||| |||||    
T  31340658 taggctttgtttgggagtttggaggggaagggatgggagggtttt 31340702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 41364027 - 41363995
Alignment:
Q  195 caacttaggctttgtttgggaatttggagggga 227  Q
    ||||||||||||||||||||| |||||||||||    
T  41364027 caacttaggctttgtttgggagtttggagggga 41363995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 305 - 353
Target Start/End: Complemental strand, 42954767 - 42954719
Alignment:
Q  305 ttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||| ||||||||||||  |||||||||||||| |||| |||||    
T  42954767 ttttagagagtgataaactaatgtttatgattaatatatttttgatttt 42954719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 45899547 - 45899511
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggg 235  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  45899547 ttaggctttgtttgggagtttggaggggaagggaggg 45899511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 53300072 - 53300036
Alignment:
Q  306 tttagagaatgataaactaatacttatgattaatata 342  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  53300072 tttagagaatgataaattaatatttatgattaatata 53300036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 198 - 353
Target Start/End: Complemental strand, 1845 - 1689
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaa 295  Q
    ||||||||||||||| || |||||||||||| ||||||||| | ||| | || ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1845 cttaggctttgtttgagagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaaaggacaaaaaaattcacattttttgaaa 1746  T
Q  296 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  1745 gaacaa-ttttttagagaatgataaactaatacttatgattaatatatttttaatttt 1689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 2e-45; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 431 - 607
Target Start/End: Original strand, 1788900 - 1789077
Alignment:
Q  431 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 530  Q
    ||||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||||||| ||||||  |||||||||||||||||||||     
T  1788900 ctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataacc 1788999  T
Q  531 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaa-ctcagtattttgtatgaga 607  Q
    | |||| |||||||| |||||||| |||||||||||| |  ||||||||||||||||| |||| ||||||| ||||||    
T  1789000 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaacctcaatattttggatgaga 1789077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 205 - 353
Target Start/End: Original strand, 4734318 - 4734466
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgtttta-gaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 303  Q
    ||||||||||| |||||||||||| |||| | |   ||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||| | |    
T  4734318 tttgtttgggagtttggaggggaagggagtgaatgattttagggggttggaaatatagagaaaaatggacaaaaaattcacattttttgaaagaac-agt 4734416  T
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4734417 tttttagagaatgataaactaatacttatgattaatatacttttaatttt 4734466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 34148398 - 34148549
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggac-aaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||| | ||||||||||||| |||||||||||| |||||| ||||||||||||||||||     
T  34148398 aggctttgtttgggagtttggaggggaagggaggggagggttttgggggttggaaatataaagaaaaatggacaaaaaaaatcacattttttgaaagaa- 34148496  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     | ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  34148497 tagttttttagagaatgataaactaa-acttatgattaatatacttttaatttt 34148549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 198 - 353
Target Start/End: Original strand, 13864907 - 13865062
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 296  Q
    |||||||||||||||  | |||||| ||||||||||||||| | |||||||| ||||||||||||||| ||||| | |||||||||||||||||||||||    
T  13864907 cttaggctttgtttgaaagtttggatgggaaaggaggggagggctttagagggttggaaatatatagataaatgaataaaaaattcacattttttgaaag 13865006  T
Q  297 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||| | ||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  13865007 aac-agttttttagaaaatgataaattaatacttatgattaatatacttttaatttt 13865062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 422 - 630
Target Start/End: Complemental strand, 17028480 - 17028270
Alignment:
Q  422 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 521  Q
    |||||||| ||||||||||||| ||||||||| |||||| |||||||| || ||||||||||||||| ||||||||||| |||||  |||||||||||||    
T  17028480 ttatgtaacctgaggcgtgacacagtcactgtccttgaggattttatccgcctcattagcgcatatcctcccaggatatgacagttcttccccgttatga 17028381  T
Q  522 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagt-attttgtat--gagaaaataattatg 618  Q
    |||||||| | |||| ||| ||||||||||||  ||  || ||||| | |||||||||||| ||||||||| | |||||| ||  |||||||||||||||    
T  17028380 atcataaccggaggtgacacaacagctcaaatatat-acacagatatcaggagatgtaacctagaaactcaataattttggatgagagaaaataattatg 17028282  T
Q  619 tgtataaagaaa 630  Q
    |||| |||||||    
T  17028281 tgtaaaaagaaa 17028270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 422 - 630
Target Start/End: Complemental strand, 17558916 - 17558706
Alignment:
Q  422 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 521  Q
    |||||||| ||||||||||||| ||||||||| |||||| |||||||| || ||||||||||||||| ||||||||||| |||||  |||||||||||||    
T  17558916 ttatgtaacctgaggcgtgacacagtcactgtccttgaggattttatccgcctcattagcgcatatcctcccaggatatgacagttcttccccgttatga 17558817  T
Q  522 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagt-attttgtat--gagaaaataattatg 618  Q
    |||||||| | |||| ||| ||||||||||||  ||  || ||||| | |||||||||||| ||||||||| | |||||| ||  |||||||||||||||    
T  17558816 atcataaccggaggtgacacaacagctcaaatatat-acacagatatcaggagatgtaacctagaaactcaataattttggatgagagaaaataattatg 17558718  T
Q  619 tgtataaagaaa 630  Q
    |||| |||||||    
T  17558717 tgtaaaaagaaa 17558706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 201 - 353
Target Start/End: Complemental strand, 36906452 - 36906298
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttag-aggttggaaatatatagaaaaatggacaaaaaat--tcacattttttgaaaga 297  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||| | |||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  36906452 aggctttgtttgggagtttggaggggaagggaggggagggctttgggaggttggaaatatatagaaaaatggacaaaaaaaaatcacattttttgaaaga 36906353  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||   ||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  36906352 acgg-tttttcagagaatgataaactaatacttatgattaatatacttttaatttt 36906298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 37659351 - 37659501
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 300  Q
    |||||||||||| ||||||||||||||| ||||||||| | ||| | |||||||||||||||||||||| | |||||| |||||| ||||||||| ||||    
T  37659351 aggctttgtttgagaatttggaggggaagggaggggagggctttgg-ggttggaaatatatagaaaaataggcaaaaagttcacaatttttgaaataaca 37659449  T
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
      ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37659450 g-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 37659501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 33230864 - 33231017
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagag-gttggaaatatatagaaaaa-tggacaaaaaattcacattttttgaaagaa 298  Q
    ||||||||||||||| |||||||||||| ||||| ||| | ||| | | |||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  33230864 aggctttgtttgggagtttggaggggaagggaggagagggctttggggagttggaaatatataaaaaaaatggataaaaaattcacattttttgaaagaa 33230963  T
Q  299 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33230964 cag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 33231017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 201 - 353
Target Start/End: Original strand, 36102708 - 36102860
Alignment:
Q  201 aggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 299  Q
    ||||||||||||||| ||  ||||||||  |||||||| ||||| | || ||| |||||||||||||||||||||||||||||||||||||| ||| |||    
T  36102708 aggctttgtttgggagttaagaggggaagagaggggagggttttggggggttgaaaatatatagaaaaatggacaaaaaattcacatttttttaaaaaac 36102807  T
Q  300 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36102808 ag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 36102860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 199 - 353
Target Start/End: Original strand, 1941866 - 1942023
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    ||||||||||||||||| |||||||||||| |||||||||   ||| |||| || ||||| |||||||||||||||||||||||||||||| ||||||||    
T  1941866 ttaggctttgtttgggagtttggaggggaagggaggggaggactttggagggtttgaaatttatagaaaaatggacaaaaaattcacatttgttgaaaga 1941965  T
Q  298 acaaattttttagagaatgataaac---taatacttatgattaatatactttttatttt 353  Q
    || | ||||||||||||||||||||   ||||||||||||||||||||||||| |||||    
T  1941966 ac-agttttttagagaatgataaactaataatacttatgattaatatacttttaatttt 1942023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 25033645 - 25033491
Alignment:
Q  199 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 297  Q
    ||||| ||||||||||| |||||||||||| ||||||||| |  ||   || || ||||||||||||||||||||||||||||||||||||||| |||||    
T  25033645 ttaggttttgtttgggagtttggaggggaagggaggggagggcattgtgggattagaaatatatagaaaaatggacaaaaaattcacattttttcaaaga 25033546  T
Q  298 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    || | ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  25033545 ac-agttttttagataatgataaactaatacttatgattaatatacttttaatttt 25033491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 209 - 353
Target Start/End: Original strand, 3404399 - 3404544
Alignment:
Q  209 tttgggaatttggaggggaaaggaggggagtgtttt-agaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaatttt 306  Q
    ||||||| |||||||||||| |||||||||   ||| || |||||||||||||||||||||| || |||||| |||||||||||||||||||||  ||||    
T  3404399 tttgggagtttggaggggaagggaggggaggactttgaggggttggaaatatatagaaaaatagataaaaaaattcacattttttgaaagaacag-tttt 3404497  T
Q  307 ttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  3404498 ttagagaatgataaactaatacttatgattaatatacttttaatttt 3404544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 405 - 598
Target Start/End: Original strand, 39655676 - 39655869
Alignment:
Q  405 caaaacaacacactatgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataaca 504  Q
    ||||||||||||||  |||| |||| ||||||||||||||||||||||| |||||| |||||||| || |||| || ||||||| ||||| |||| ||||    
T  39655676 caaaacaacacact--gttaagtaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagtgcatatcctcccatgatacaaca 39655773  T
Q  505 gtcattccccgttatgaatcataactgaaggttacagaacagctcaaattaatctcaaagataa-ccggagatgtaaccc-agaaactcagtattt 598  Q
    ||  ||| ||||||||||||||||| | | || ||||||||||||||||| |||||||||||||   ||||||||||||| ||||||||| |||||    
T  39655774 gttcttctccgttatgaatcataaccggatgtgacagaacagctcaaatttatctcaaagataagttggagatgtaacccaagaaactcaatattt 39655869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 205 - 353
Target Start/End: Complemental strand, 34349974 - 34349826
Alignment:
Q  205 tttgtttgggaatttggaggggaaaggaggggagtgttttagagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa-gaacaaa 302  Q
    ||||||||||| |||||||||||| | ||||||  | ||| |||| |||||||||||||||||| | ||||||||||||||||||||| ||| |||||      
T  34349974 tttgtttgggagtttggaggggaaggaaggggaaggctttggagggttggaaatatatagaaaa-tagacaaaaaattcacatttttttaaaagaacag- 34349877  T
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34349876 ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 34349826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 248 - 353
Target Start/End: Complemental strand, 34272730 - 34272626
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  34272730 ggttggaaatatatagaaaaatgggcaaaaaattcaaattttttgaaaaaacag-ttttttagaaaatgataaactaatacttatgattaatatactttt 34272632  T
Q  348 tatttt 353  Q
     |||||    
T  34272631 aatttt 34272626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 422 - 657
Target Start/End: Complemental strand, 38678809 - 38678575
Alignment:
Q  422 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 521  Q
    |||| ||| ||||||||||||||||||| |||  ||||| |||| ||| |  |||| |||||||||| |  ||||||| ||||||  |||||||||||||    
T  38678809 ttatataacctgaggcgtgacatagtca-tgtctttgaggatttgatccgtctcataagcgcatatccttacaggatacaacagt--ttccccgttatga 38678713  T
Q  522 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtat--gagaaaataattatgt 619  Q
    |||||||  | |||| |||||||| |||||||| |||| |||||||||  |||||| || ||||||| ||| ||||||| ||  ||||||||||||||||    
T  38678712 atcataatcggaggtgacagaacaactcaaatttatcttaaagataacaagagatgcaa-ccagaaattcaatattttggatgagagaaaataattatgt 38678614  T
Q  620 gtataaagaaatat-aaatgagagagcatatatgtgtat 657  Q
    | |||||||||||| ||||||||||| || | |||||||    
T  38678613 gcataaagaaatatgaaatgagagagtatttgtgtgtat 38678575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 7392 - 7296
Alignment:
Q  257 tatatagaaaaatggacaaaaaattcacatttttt-gaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||||| |||||||||||||| |||||    
T  7392 tatatagaaaaatagacaaaaaattcacatttttttgaaagaacag-ttatttagagaatgataaactaatacttataattaatatacttttaatttt 7296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 248 - 353
Target Start/End: Original strand, 2474633 - 2474737
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||| ||||||||||||||||||| ||||||||  |||||||||||| ||||  ||||||||| ||||||||||||||||||||| |||||||||||||    
T  2474633 ggttgaaaatatatagaaaaatggataaaaaatttgcattttttgaaaaaacag-ttttttagataatgataaactaatacttatggttaatatactttt 2474731  T
Q  348 tatttt 353  Q
     |||||    
T  2474732 aatttt 2474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 482 - 657
Target Start/End: Complemental strand, 38676373 - 38676196
Alignment:
Q  482 gcatatcatcccaggatataacagtcattccccgttatgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaac 581  Q
    ||||||| |||||||||| |||| |  ||||||||||||||||||||  | |||| |||||||| |||||||| || | ||||||||| ||||||  ||     
T  38676373 gcatatcctcccaggatacaacaattcttccccgttatgaatcataatcggaggtgacagaacaactcaaatttattttaaagataacaggagatacaa- 38676275  T
Q  582 ccagaaactcagtattttgtat--gagaaaataattatgtgtataaagaaatat-aaatgagagagcatatatgtgtat 657  Q
    ||||||||||| ||||||| ||  |||||||||||||||||||||| ||||||| || |||||||| || | |||||||    
T  38676274 ccagaaactcaatattttggatgagagaaaataattatgtgtataacgaaatatgaagtgagagagtatttgtgtgtat 38676196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 431 - 546
Target Start/End: Original strand, 21185322 - 21185437
Alignment:
Q  431 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 530  Q
    |||| |||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||| |||||| |||  |||||||||||||||||||||     
T  21185322 ctgaagcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccagcatataatagttcttccccgttatgaatcataacc 21185421  T
Q  531 gaaggttacagaacag 546  Q
    | |||| ||| |||||    
T  21185422 ggaggtgacaaaacag 21185437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 462 - 607
Target Start/End: Complemental strand, 21347197 - 21347052
Alignment:
Q  462 attttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataactgaaggttacagaacagctcaaattaatctca 561  Q
    |||||||| || |||| ||| |||||| ||||| |||| ||| ||  || | ||||||||||||||| ||||||| || ||||| || ||| ||||||||    
T  21347197 attttatccgcctcataagcacatatcctcccaagatacaactgttctttcacgttatgaatcataaatgaaggtgacggaacaactgaaaataatctca 21347098  T
Q  562 aagataaccggagatgtaacccagaaactcagtattttgtatgaga 607  Q
    |||| |||||||||||||||||| ||||||| || |||| ||||||    
T  21347097 aagacaaccggagatgtaacccacaaactcaatactttggatgaga 21347052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 355 - 408
Target Start/End: Original strand, 39655601 - 39655654
Alignment:
Q  355 agtgaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  39655601 agtgaaacttatcgaatttgattgccgacacagctccatcaaaatcttcacaaa 39655654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 15108162 - 15108226
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactt 345  Q
    |||| |||||||||||||| || ||||||||||||||||||| ||| |||||||||||||||||||    
T  15108162 ttcatattttttgaaagaataa-ttttttagagaatgataaattaacacttatgattaatatactt 15108226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 247 - 341
Target Start/End: Original strand, 6839664 - 6839756
Alignment:
Q  247 aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatat 341  Q
    |||| |||||||| ||||||||| || |||   |||| | |||| ||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  6839664 aggtgggaaatatgtagaaaaatagagaaatctttcatacttttcgaaagaacaa--tttttagagaatgataaactaatacttattattaatat 6839756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 358 - 413
Target Start/End: Complemental strand, 31183906 - 31183851
Alignment:
Q  358 gaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaaacaac 413  Q
    |||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||    
T  31183906 gaaacttatcgaatttggttgtagacacagctccatcaaaatcttcataaatcaac 31183851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 31297268 - 31297318
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  31297268 ttttttagagaacgataaactaatatttatgattaatatacttttaatttt 31297318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 31297227 - 31297272
Alignment:
Q  246 gaggttggaaatatatagaaaaatggacaaaaaattcacatttttt 291  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||    
T  31297227 gaggttagaaatatatagaaaaatggacaaaacattcacatttttt 31297272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 282 - 353
Target Start/End: Complemental strand, 3394142 - 3394072
Alignment:
Q  282 cacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||  || ||||| ||||||||||||| ||||  |||||||||||||| ||||||||||    
T  3394142 cacattttttgaaagagtaa-tttttaagagaatgataaattaatgtttatgattaatatattttttatttt 3394072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 21347313 - 21347263
Alignment:
Q  358 gaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 408  Q
    |||| ||||| |||||||||| ||||||||||| |||||||||||||||||    
T  21347313 gaaatttatcaaatttggttgtcgacacagctctatcaaaatcttcacaaa 21347263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 432 - 498
Target Start/End: Complemental strand, 31183816 - 31183750
Alignment:
Q  432 tgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggat 498  Q
    |||||||||||||| |||||||| ||||| ||||||||  | ||||||||||||||| ||| |||||    
T  31183816 tgaggcgtgacataatcactgttattgagtattttatccacctcattagcgcatatcctccaaggat 31183750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 350
Target Start/End: Complemental strand, 37388462 - 37388393
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttat 350  Q
    ||||||||||||||||||  |||||||| ||||||||||||| |||   |||||||||||||| |||||||    
T  37388462 ttcacattttttgaaagagtaaattttt-agagaatgataaattaaagtttatgattaatatattttttat 37388393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 329
Target Start/End: Original strand, 43732936 - 43733060
Alignment:
Q  204 ctttgtttgggaatttggaggggaaaggaggggagtgttttagaggttg-gaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaa 302  Q
    |||||||||||| ||||| |||||  ||| ||||| ||||| |||| || ||| | |||||| ||||||| |||   ||||||||||||| |||| |||     
T  43732936 ctttgtttgggagtttgg-ggggaggggaagggagggttttggagggtgagaattgtatagagaaatggagaaatctttcacattttttggaagagcaa- 43733033  T
Q  303 ttttttagagaatgataaactaatact 329  Q
    ||||||||| |||||||||||||||||    
T  43733034 ttttttagataatgataaactaatact 43733060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 13258669 - 13258597
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||  |  ||||||||||||||||||| |||| |||| |||||||||| |||| |||||    
T  13258669 ttcacattttttgaaagagtat-ttttttagagaatgataaattaatgcttacgattaatatatttttaatttt 13258597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 11876934 - 11876978
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||| ||||||| |||||||||||||||||||| ||||    
T  11876934 ttttttagagagtgataaattaatacttatgattaatatattttt 11876978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 11891941 - 11891985
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||| ||||||| |||||||||||||||||||| ||||    
T  11891941 ttttttagagagtgataaattaatacttatgattaatatattttt 11891985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 13537505 - 13537453
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||| ||||| |||| ||||||||||||||| |||| |||||    
T  13537505 aattttttagagaataataaattaatgcttatgattaatatatttttaatttt 13537453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 13627053 - 13627001
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||| ||||| |||| ||||||||||||||| |||| |||||    
T  13627053 aattttttagagaataataaattaatgcttatgattaatatatttttaatttt 13627001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 27085532 - 27085460
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 352  Q
    ||||||||| ||||||||  |  ||||||||||| ||||||| |||| ||||||||||||||| |||| ||||    
T  27085532 ttcacatttgttgaaagagtattttttttagagagtgataaattaatgcttatgattaatatatttttaattt 27085460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 40984992 - 40985044
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||||| ||||  |||||||||||||| |||| |||||    
T  40984992 aattttttagagaatgataaattaatgtttatgattaatatatttttaatttt 40985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 353
Target Start/End: Complemental strand, 29612149 - 29612102
Alignment:
Q  306 tttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||| ||||||||| |||||||||||||||||||| |||| |||||    
T  29612149 tttagacaatgataaattaatacttatgattaatatatttttaatttt 29612102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 35353989 - 35353938
Alignment:
Q  302 attttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||| ||||||||||| ||||| |||||||||||||| |||| |||||    
T  35353989 attttttatagaatgataaattaatatttatgattaatatatttttaatttt 35353938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 353
Target Start/End: Complemental strand, 39779951 - 39779904
Alignment:
Q  306 tttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||| ||||||| ||| |||||||||||||||| ||||||||||    
T  39779951 tttagagagtgataaattaagacttatgattaatatattttttatttt 39779904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 5941247 - 5941185
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatata 342  Q
    ||||||||||||||||||  || |||||| ||| |||||||| |||| ||||| |||||||||    
T  5941247 ttcacattttttgaaagagtaattttttttgagtatgataaattaatgcttataattaatata 5941185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 10605077 - 10605127
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||| || || |||||||||||||| |||| |||||    
T  10605077 ttttttagagaatgataaattattatttatgattaatatatttttaatttt 10605127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 422 - 468
Target Start/End: Complemental strand, 38676939 - 38676893
Alignment:
Q  422 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttat 468  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||    
T  38676939 ttatataacctgaggcgtgacatagtcactgtccttgaggattttat 38676893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 353
Target Start/End: Complemental strand, 38404501 - 38404452
Alignment:
Q  304 tttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||| |||| |||| ||||| |||||||||||||| ||||||||||    
T  38404501 tttttagaaaatggtaaattaatatttatgattaatatattttttatttt 38404452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 4137857 - 4137817
Alignment:
Q  313 aatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||| |||||||||||||||||||| |||| |||||    
T  4137857 aatgataaattaatacttatgattaatatatttttaatttt 4137817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 14641556 - 14641504
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttattttta 355  Q
    ||||||||||||||||||| |||||| |||||||  |||| |||||| |||||    
T  14641556 ttttttagagaatgataaattaatacatatgattgctatattttttaatttta 14641504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 422 - 466
Target Start/End: Original strand, 17088762 - 17088806
Alignment:
Q  422 ttatgtaatctgaggcgtgacatagtcactgttcttgagaatttt 466  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||    
T  17088762 ttatctaacctgaggcgtgacatagtcactgtccttgaggatttt 17088806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 34272383 - 34272423
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggag 238  Q
    |||||||||||||||||| |||| ||||||| |||||||||    
T  34272383 cttaggctttgtttgggagtttgaaggggaagggaggggag 34272423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 39194092 - 39194048
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||||||||||||||||||||||  |||||||| ||||| ||||    
T  39194092 ttttttagagaatgataaactaatgtttatgattcatatattttt 39194048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 355
Target Start/End: Original strand, 41540420 - 41540472
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttttattttta 355  Q
    ||||||||||| | ||||| ||||||| |||||||||||| |||| |||||||    
T  41540420 ttttttagagagtaataaattaatactcatgattaatatatttttaattttta 41540472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 86; Significance: 9e-41; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 198 - 353
Target Start/End: Original strand, 3484 - 3640
Alignment:
Q  198 cttaggctttgtttgggaatttggaggggaaaggaggggagtg-ttttagaggttggaaatatatagaaaaatggac-aaaaaattcacattttttgaaa 295  Q
    |||||||||||||||||| ||||||||||||  || ||||| | |||  | |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  3484 cttaggctttgtttgggagtttggaggggaagagatgggagggctttggggggttggcaatatatagaaaaatggacaaaaaaattcacattttttgaaa 3583  T
Q  296 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
     ||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3584 taac-agttttttagagaatgataaactaatacttatgattaatatacttttaatttt 3640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 431 - 607
Target Start/End: Complemental strand, 82738 - 82561
Alignment:
Q  431 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 530  Q
    ||||||||||||||||||||| | |||||| |||||||| || |||| |||||||||| |||||||||| ||||||  ||||||||||| ||||||| |     
T  82738 ctgaggcgtgacatagtcactatccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttataaatcatagcc 82639  T
Q  531 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaa-ctcagtattttgtatgaga 607  Q
    | | || |||||||| |||||||| |||||||||||| |  |||||| |||||||||| |||| ||||||| ||||||    
T  82638 ggatgtgacagaacatctcaaatttatctcaaagatatcatgagatgcaacccagaaacctcaatattttggatgaga 82561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 73; Significance: 5e-33; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 230 - 330
Target Start/End: Complemental strand, 68000 - 67901
Alignment:
Q  230 ggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatact 329  Q
    ||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  68000 ggaggggagggctttgggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-agttttttagagaatgataaactaatact 67902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 230 - 330
Target Start/End: Complemental strand, 76105 - 76006
Alignment:
Q  230 ggaggggagtgttttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatact 329  Q
    ||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  76105 ggaggggagggctttgggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-agttttttagagaatgataaactaatact 76007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 248 - 330
Target Start/End: Original strand, 107675 - 107756
Alignment:
Q  248 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatactt 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  107675 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-agttttttagagaatgataaactaatactt 107756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 4489 - 4401
Alignment:
Q  251 tggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaata 340  Q
    ||||||||||||||||||| || |||  ||||||||| ||||||||||| | ||||| ||||||||||||| |||| |||||||||||||    
T  4489 tggaaatatatagaaaaatagaaaaatcattcacattctttgaaagaaccacttttt-agagaatgataaattaatgcttatgattaata 4401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 661 - 611
Alignment:
Q  250 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 300  Q
    |||||||||||| ||||||| ||||||||||||||||||||| ||||||||    
T  661 ttggaaatatatggaaaaatagacaaaaaattcacattttttaaaagaaca 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 10298 - 10248
Alignment:
Q  250 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 300  Q
    |||||||||||| ||||||| ||||||||||||||||||||| ||||||||    
T  10298 ttggaaatatatggaaaaatagacaaaaaattcacattttttaaaagaaca 10248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 422 - 527
Target Start/End: Original strand, 6752 - 6857
Alignment:
Q  422 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 521  Q
    |||| ||| |||||||||||||||||||||||  ||||| |||||||| || |||| || ||||||| | ||| |||| ||||||  ||||| | |||||    
T  6752 ttatctaaactgaggcgtgacatagtcactgtcattgaggattttatccgcctcataagtgcatatccttccatgatacaacagtttttccctgatatga 6851  T
Q  522 atcata 527  Q
    ||||||    
T  6852 atcata 6857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1763 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 353
Target Start/End: Original strand, 502 - 574
Alignment:
Q  280 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||||||||||  ||||||| ||||||||| |||| ||||  |||||||||||||| |||| |||||    
T  502 ttcacattttttgaaagagtaaatttt-tagagaatgttaaattaatgtttatgattaatatatttttaatttt 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 2830 - 2874
Alignment:
Q  303 ttttttagagaatgataaactaatacttatgattaatatactttt 347  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||    
T  2830 tttttaagagaatgataaactaatacttatgattcatatattttt 2874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 4309 - 4257
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||| |||||||||||| |||| ||||||||||||||| |||| |||||    
T  4309 aattttttggagaatgataaattaatgcttatgattaatatatttttaatttt 4257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 4640 - 4588
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    |||||||| |||||||||||| |||| ||||||||||||||| |||| |||||    
T  4640 aattttttggagaatgataaattaatgcttatgattaatatatttttaatttt 4588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 342
Target Start/End: Original strand, 68618 - 68659
Alignment:
Q  301 aattttttagagaatgataaactaatacttatgattaatata 342  Q
    |||| |||||| ||||||||| ||||||||||||||||||||    
T  68618 aattatttagataatgataaattaatacttatgattaatata 68659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 7927 - 7878
Alignment:
Q  302 attttttagagaatgataaactaatacttatgattaatatactttttatttt 353  Q
    ||||||||||| |||||||||||||| |||| ||||||||  ||||||||||    
T  7927 attttttagaggatgataaactaatatttattattaatat--tttttatttt 7878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 197 - 237
Target Start/End: Original strand, 59668 - 59708
Alignment:
Q  197 acttaggctttgtttgggaatttggaggggaaaggagggga 237  Q
    ||||||||||||||||||| |||||||||||  ||||||||    
T  59668 acttaggctttgtttgggagtttggaggggaggggagggga 59708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1294 times since January 2019
Visitors: 3440