View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0497-Insertion-10 (Length: 246)
Name: NF0497-Insertion-10
Description: NF0497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0497-Insertion-10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 44489196 - 44488958
Alignment:
| Q |
8 |
aaaacaaggcgtatctgatgatgatcggagatggaatcaaccgaacaattatcaccggcaatcacagtgttggtgatggatggacaacttttaattcccc |
107 |
Q |
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| T |
44489196 |
aaaacaaggcgtatctgatgatgatcggagatggaatcaaccgaacaattatcaccggcaatcacagtgttggtgatggatggacaacttttaattcccc |
44489097 |
T |
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| Q |
108 |
aacatttggtaagaaaacaatttttatttcattttcagaaac----tatacatcttttggttaggtctaattcaatccttacaaaatcagcttttacaat |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44489096 |
aacatttggtaagaaaacaatttttatttcattttcagaaactatatatacatcttttggttaggtctaattcaatccttacaaaatcagcttttacaat |
44488997 |
T |
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| Q |
204 |
gaagatatattgtcttcatttataaacacattttcagactata |
246 |
Q |
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|||| ||||||||||||||||||||||||||||||||||| |
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| T |
44488996 |
gaag----attgtcttcatttataaacacattttcagactata |
44488958 |
T |
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