View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0497_high_22 (Length: 231)
Name: NF0497_high_22
Description: NF0497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0497_high_22 |
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Alignment Details
Target: chr3 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 20049716 - 20049847
Alignment:
| Q |
21 |
agagccacaaagtcacccctcataag--tacatgggccaacacaactacaatcctctaggagtcgagcctgaatgggtcatcttttaaaccacccaaaaa |
118 |
Q |
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||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| |
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| T |
20049716 |
agagccacaaagtcatccctcataagcctacatgggccaacacaactacaatcctctaggagtcgagtctgaatgggtcatcttctaaaccgcccaaaaa |
20049815 |
T |
|
| Q |
119 |
ttatggaccttccatggaggggaagcaaccac |
150 |
Q |
| |
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||||||||| |||||||||||||||||||||| |
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| T |
20049816 |
ttatggaccatccatggaggggaagcaaccac |
20049847 |
T |
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