View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0497_low_15 (Length: 274)
Name: NF0497_low_15
Description: NF0497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0497_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 46 - 191
Target Start/End: Original strand, 41705254 - 41705399
Alignment:
| Q |
46 |
tcatcacactcttcatttcacattcttcatctcaaatgctactattacctctaacacactcactctccataatagaattcaacacaacccaccacctcct |
145 |
Q |
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| T |
41705254 |
tcatcacactcttcatttcacattcttcatctcaaatgctactattacctctaacacactcactctccatgatagaattcaacacaacccaccacctcct |
41705353 |
T |
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| Q |
146 |
taaatccacctcaactcactcattatcacgcttccaccgccataaa |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41705354 |
taaatccacctcaactcactcattatcacgcttccaccgccataaa |
41705399 |
T |
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