View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0497_low_2 (Length: 699)

Name: NF0497_low_2
Description: NF0497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0497_low_2
NF0497_low_2
[»] chr1 (90 HSPs)
chr1 (66-448)||(46267287-46267660)
chr1 (554-652)||(42572705-42572803)
chr1 (588-652)||(27487614-27487678)
chr1 (588-652)||(29763167-29763231)
chr1 (588-652)||(14174859-14174923)
chr1 (520-650)||(19159615-19159750)
chr1 (523-603)||(19161888-19161968)
chr1 (587-650)||(49927451-49927514)
chr1 (555-652)||(6434776-6434873)
chr1 (556-652)||(13972091-13972187)
chr1 (498-638)||(49395574-49395714)
chr1 (597-652)||(26637204-26637259)
chr1 (477-601)||(22524076-22524200)
chr1 (590-652)||(49426750-49426813)
chr1 (489-603)||(586602-586716)
chr1 (462-603)||(18609892-18610033)
chr1 (520-611)||(13636111-13636203)
chr1 (588-652)||(44596896-44596960)
chr1 (498-574)||(48228328-48228404)
chr1 (463-574)||(97949-98060)
chr1 (524-603)||(44598903-44598982)
chr1 (501-600)||(50343968-50344067)
chr1 (462-603)||(9618656-9618794)
chr1 (558-652)||(13147527-13147621)
chr1 (522-584)||(30194416-30194478)
chr1 (546-603)||(9710597-9710654)
chr1 (522-603)||(29424375-29424456)
chr1 (498-575)||(49429160-49429237)
chr1 (495-575)||(49661758-49661838)
chr1 (592-652)||(51269003-51269063)
chr1 (528-603)||(4883234-4883309)
chr1 (489-584)||(19914428-19914523)
chr1 (524-575)||(29765554-29765605)
chr1 (524-603)||(44470008-44470087)
chr1 (524-603)||(46886385-46886463)
chr1 (524-599)||(51271592-51271667)
chr1 (522-575)||(94404-94457)
chr1 (522-575)||(49426708-49426761)
chr1 (600-648)||(4208454-4208502)
chr1 (588-652)||(29435034-29435097)
chr1 (523-603)||(46217315-46217395)
chr1 (497-569)||(47505916-47505988)
chr1 (524-571)||(2425714-2425761)
chr1 (524-603)||(15047279-15047358)
chr1 (497-568)||(21140995-21141066)
chr1 (524-571)||(44596858-44596905)
chr1 (597-652)||(36908640-36908699)
chr1 (477-603)||(45977695-45977821)
chr1 (461-578)||(14985272-14985389)
chr1 (515-645)||(24364680-24364810)
chr1 (559-652)||(29709259-29709352)
chr1 (527-603)||(9711648-9711724)
chr1 (524-600)||(52802127-52802203)
chr1 (489-603)||(2365196-2365311)
chr1 (524-603)||(6562158-6562237)
chr1 (486-575)||(22397778-22397868)
chr1 (614-652)||(41779766-41779804)
chr1 (522-603)||(29425333-29425414)
chr1 (477-542)||(46908341-46908406)
chr1 (489-603)||(585616-585727)
chr1 (515-603)||(31783712-31783800)
chr1 (499-542)||(6328922-6328965)
chr1 (525-603)||(19928808-19928887)
chr1 (544-603)||(20353932-20353991)
chr1 (524-603)||(23359346-23359425)
chr1 (544-603)||(38771646-38771705)
chr1 (546-601)||(44336268-44336323)
chr1 (461-507)||(253027-253073)
chr1 (462-532)||(640987-641057)
chr1 (485-547)||(19155972-19156034)
chr1 (461-507)||(20114538-20114584)
chr1 (524-578)||(27485056-27485110)
chr1 (477-578)||(27650016-27650114)
chr1 (588-652)||(35526983-35527051)
chr1 (462-584)||(51291602-51291723)
chr1 (498-575)||(4208367-4208444)
chr1 (524-601)||(6557912-6557989)
chr1 (498-575)||(12627210-12627287)
chr1 (462-507)||(26944413-26944458)
chr1 (462-507)||(32161386-32161431)
chr1 (526-579)||(42290295-42290348)
chr1 (524-603)||(47653704-47653780)
chr1 (550-603)||(48751407-48751460)
chr1 (550-602)||(11183209-11183261)
chr1 (524-600)||(13761044-13761120)
chr1 (501-601)||(15695768-15695868)
chr1 (550-578)||(19495089-19495117)
chr1 (524-603)||(31945858-31945938)
chr1 (602-650)||(44338216-44338264)
chr1 (498-542)||(49502075-49502119)
[»] chr4 (104 HSPs)
chr4 (66-307)||(55859300-55859541)
chr4 (65-307)||(35204085-35204335)
chr4 (304-448)||(45148379-45148526)
chr4 (550-652)||(56138275-56138377)
chr4 (522-650)||(28081453-28081582)
chr4 (465-575)||(34530794-34530904)
chr4 (524-648)||(1041932-1042056)
chr4 (520-650)||(55793912-55794047)
chr4 (554-652)||(958542-958640)
chr4 (554-652)||(44561278-44561376)
chr4 (588-652)||(34530743-34530807)
chr4 (588-652)||(39588127-39588191)
chr4 (485-574)||(3183939-3184028)
chr4 (462-603)||(28235558-28235699)
chr4 (520-650)||(6178056-6178191)
chr4 (588-652)||(34154376-34154440)
chr4 (520-650)||(49094076-49094211)
chr4 (588-652)||(51429277-51429341)
chr4 (588-652)||(56304911-56304975)
chr4 (520-650)||(21017951-21018085)
chr4 (588-650)||(6283417-6283479)
chr4 (489-603)||(21022885-21022999)
chr4 (462-574)||(3186090-3186202)
chr4 (524-600)||(16983519-16983595)
chr4 (554-634)||(29700268-29700348)
chr4 (463-603)||(56565693-56565833)
chr4 (524-603)||(16984158-16984237)
chr4 (520-645)||(41795307-41795437)
chr4 (588-652)||(42885510-42885576)
chr4 (489-603)||(7485658-7485772)
chr4 (524-603)||(18884501-18884580)
chr4 (524-603)||(40833607-40833686)
chr4 (489-584)||(51037484-51037579)
chr4 (583-649)||(243296-243362)
chr4 (489-601)||(38368193-38368302)
chr4 (522-584)||(38369198-38369260)
chr4 (463-584)||(16473696-16473817)
chr4 (498-603)||(48806456-48806561)
chr4 (462-603)||(51492006-51492147)
chr4 (524-600)||(39590568-39590644)
chr4 (515-603)||(50446996-50447084)
chr4 (524-603)||(14200558-14200637)
chr4 (524-603)||(15995719-15995798)
chr4 (524-603)||(19069184-19069263)
chr4 (524-603)||(46254445-46254524)
chr4 (489-603)||(23220640-23220754)
chr4 (497-575)||(40061186-40061264)
chr4 (502-600)||(44680074-44680172)
chr4 (589-638)||(4786296-4786345)
chr4 (498-575)||(8111440-8111517)
chr4 (498-603)||(43176625-43176730)
chr4 (462-598)||(49889617-49889753)
chr4 (524-604)||(9889991-9890071)
chr4 (489-603)||(23221667-23221778)
chr4 (524-600)||(28083990-28084066)
chr4 (498-598)||(37856746-37856846)
chr4 (484-603)||(39773360-39773480)
chr4 (497-569)||(50020087-50020159)
chr4 (477-603)||(12375938-12376061)
chr4 (550-601)||(48256567-48256618)
chr4 (498-603)||(36480537-36480639)
chr4 (497-567)||(50023580-50023650)
chr4 (497-567)||(50030698-50030768)
chr4 (526-575)||(44674163-44674212)
chr4 (489-584)||(55587320-55587412)
chr4 (489-584)||(55588303-55588395)
chr4 (462-583)||(7484665-7484782)
chr4 (524-603)||(21015736-21015815)
chr4 (494-601)||(28234383-28234490)
chr4 (520-575)||(40354601-40354656)
chr4 (489-603)||(49169094-49169209)
chr4 (524-575)||(50274757-50274808)
chr4 (489-603)||(54634012-54634127)
chr4 (494-575)||(31242182-31242264)
chr4 (486-603)||(37563277-37563395)
chr4 (462-575)||(46165680-46165790)
chr4 (522-575)||(3403842-3403895)
chr4 (497-574)||(51494875-51494952)
chr4 (609-645)||(11287557-11287593)
chr4 (462-578)||(44794994-44795110)
chr4 (524-603)||(15999796-15999875)
chr4 (498-597)||(20208481-20208580)
chr4 (489-575)||(26792269-26792356)
chr4 (497-603)||(26932553-26932660)
chr4 (497-552)||(40061071-40061126)
chr4 (498-597)||(48807389-48807488)
chr4 (555-601)||(17342170-17342216)
chr4 (500-534)||(19682177-19682211)
chr4 (494-603)||(30726738-30726848)
chr4 (557-603)||(34503739-34503785)
chr4 (478-568)||(34528115-34528205)
chr4 (555-600)||(955820-955865)
chr4 (462-519)||(28320493-28320550)
chr4 (547-603)||(33051649-33051706)
chr4 (514-575)||(37855846-37855907)
chr4 (588-617)||(37865203-37865232)
chr4 (497-574)||(50196936-50197013)
chr4 (546-575)||(50278823-50278852)
chr4 (498-575)||(51036474-51036551)
chr4 (555-600)||(51426565-51426610)
chr4 (524-580)||(4768675-4768731)
chr4 (497-569)||(9013900-9013972)
chr4 (489-603)||(14201527-14201638)
chr4 (550-602)||(55407791-55407843)
[»] chr2 (78 HSPs)
chr2 (66-307)||(29275057-29275298)
chr2 (550-650)||(41500184-41500284)
chr2 (557-652)||(24512197-24512292)
chr2 (462-603)||(7189948-7190089)
chr2 (462-603)||(3943189-3943330)
chr2 (588-652)||(2920464-2920528)
chr2 (520-652)||(34638134-34638262)
chr2 (536-652)||(39393046-39393162)
chr2 (461-600)||(28419341-28419480)
chr2 (589-652)||(40679545-40679608)
chr2 (522-650)||(17424126-17424259)
chr2 (554-652)||(43491136-43491234)
chr2 (554-646)||(10365746-10365838)
chr2 (558-652)||(29093779-29093870)
chr2 (489-584)||(30803034-30803129)
chr2 (562-652)||(2648152-2648242)
chr2 (461-603)||(23347325-23347467)
chr2 (462-584)||(41273264-41273386)
chr2 (462-575)||(20951071-20951184)
chr2 (522-603)||(23346775-23346856)
chr2 (494-574)||(3086003-3086083)
chr2 (520-650)||(3937798-3937933)
chr2 (520-650)||(43982191-43982326)
chr2 (498-603)||(10425816-10425921)
chr2 (524-584)||(36510872-36510932)
chr2 (589-652)||(26858175-26858238)
chr2 (528-603)||(28477064-28477139)
chr2 (497-600)||(29401605-29401708)
chr2 (489-603)||(10424801-10424915)
chr2 (462-575)||(7184990-7185103)
chr2 (498-603)||(33222587-33222692)
chr2 (498-575)||(43976823-43976900)
chr2 (600-652)||(16580559-16580611)
chr2 (497-569)||(36652876-36652948)
chr2 (515-603)||(43258730-43258818)
chr2 (524-584)||(43870137-43870197)
chr2 (524-603)||(29947764-29947843)
chr2 (494-572)||(29074031-29074109)
chr2 (522-600)||(29406967-29407045)
chr2 (546-603)||(29397929-29397986)
chr2 (462-542)||(2528607-2528687)
chr2 (489-601)||(39489145-39489257)
chr2 (489-603)||(20937859-20937974)
chr2 (489-603)||(22003398-22003513)
chr2 (524-603)||(27276371-27276450)
chr2 (489-575)||(43619167-43619254)
chr2 (497-575)||(6637504-6637582)
chr2 (498-552)||(29601193-29601247)
chr2 (524-601)||(10825215-10825292)
chr2 (498-603)||(16544342-16544447)
chr2 (522-603)||(39947594-39947675)
chr2 (554-603)||(41004555-41004604)
chr2 (527-575)||(24607593-24607641)
chr2 (515-603)||(29407884-29407972)
chr2 (462-601)||(34639313-34639453)
chr2 (515-575)||(43257738-43257798)
chr2 (524-603)||(3795334-3795413)
chr2 (524-575)||(3803568-3803619)
chr2 (489-603)||(17420529-17420644)
chr2 (525-603)||(17426362-17426441)
chr2 (588-650)||(28472148-28472214)
chr2 (524-575)||(38945759-38945810)
chr2 (528-603)||(40156400-40156475)
chr2 (462-574)||(15488172-15488281)
chr2 (529-603)||(28138582-28138656)
chr2 (462-575)||(39211587-39211697)
chr2 (489-547)||(39793924-39793982)
chr2 (489-547)||(39800706-39800764)
chr2 (498-575)||(14002490-14002567)
chr2 (554-603)||(25184827-25184876)
chr2 (497-542)||(33002364-33002409)
chr2 (462-507)||(43870215-43870260)
chr2 (524-603)||(213449-213529)
chr2 (515-575)||(12252507-12252567)
chr2 (524-603)||(18003269-18003349)
chr2 (520-571)||(28472105-28472157)
chr2 (463-511)||(29093923-29093971)
chr2 (489-603)||(39489963-39490074)
[»] chr5 (60 HSPs)
chr5 (66-307)||(3822484-3822727)
chr5 (497-652)||(542738-542894)
chr5 (528-652)||(11346008-11346133)
chr5 (522-652)||(18307249-18307379)
chr5 (556-652)||(25497540-25497636)
chr5 (498-652)||(35564232-35564386)
chr5 (462-603)||(7762241-7762382)
chr5 (555-638)||(20192381-20192464)
chr5 (588-650)||(42865754-42865816)
chr5 (520-650)||(19037416-19037551)
chr5 (520-650)||(30708895-30709030)
chr5 (462-600)||(42912878-42913016)
chr5 (462-575)||(14688-14801)
chr5 (520-650)||(7994-8128)
chr5 (498-575)||(11348500-11348577)
chr5 (557-652)||(3600367-3600462)
chr5 (528-603)||(7757326-7757401)
chr5 (524-575)||(8539541-8539592)
chr5 (588-652)||(8537226-8537291)
chr5 (524-575)||(3891480-3891531)
chr5 (497-600)||(38408467-38408570)
chr5 (528-575)||(43094601-43094648)
chr5 (497-575)||(5200381-5200459)
chr5 (498-600)||(18512652-18512753)
chr5 (462-575)||(30705071-30705185)
chr5 (522-603)||(30192487-30192568)
chr5 (498-603)||(35671053-35671158)
chr5 (462-542)||(8680301-8680381)
chr5 (498-578)||(18512202-18512282)
chr5 (489-603)||(13837685-13837800)
chr5 (524-598)||(5773-5847)
chr5 (524-644)||(28880318-28880443)
chr5 (462-547)||(27673706-27673791)
chr5 (522-603)||(34122519-34122600)
chr5 (612-652)||(1401388-1401428)
chr5 (528-572)||(43094009-43094053)
chr5 (498-548)||(510993-511043)
chr5 (462-508)||(11699259-11699305)
chr5 (520-572)||(8576972-8577025)
chr5 (522-603)||(25877617-25877697)
chr5 (497-574)||(38971649-38971726)
chr5 (554-601)||(18538334-18538381)
chr5 (524-575)||(20744018-20744069)
chr5 (524-603)||(41798815-41798894)
chr5 (524-574)||(1397376-1397426)
chr5 (522-596)||(41623052-41623126)
chr5 (524-574)||(42937189-42937239)
chr5 (462-507)||(2532595-2532640)
chr5 (588-645)||(16462035-16462092)
chr5 (489-603)||(19041114-19041229)
chr5 (546-575)||(30887385-30887414)
chr5 (549-602)||(34123933-34123986)
chr5 (526-575)||(42942476-42942525)
chr5 (494-584)||(3892456-3892543)
chr5 (497-541)||(5197014-5197058)
chr5 (524-600)||(28388519-28388595)
chr5 (524-603)||(38855708-38855788)
chr5 (550-602)||(38968118-38968170)
chr5 (498-542)||(40788784-40788828)
chr5 (555-603)||(40789204-40789252)
[»] chr3 (106 HSPs)
chr3 (462-652)||(34694382-34694573)
chr3 (524-652)||(55385134-55385262)
chr3 (524-652)||(43476188-43476317)
chr3 (522-652)||(2271260-2271391)
chr3 (522-652)||(4004750-4004881)
chr3 (522-652)||(36134318-36134449)
chr3 (524-641)||(24703374-24703491)
chr3 (524-650)||(41802995-41803121)
chr3 (524-652)||(52570514-52570642)
chr3 (524-650)||(55207613-55207739)
chr3 (524-652)||(49219739-49219867)
chr3 (554-652)||(45101796-45101894)
chr3 (559-652)||(41577107-41577200)
chr3 (462-603)||(42166407-42166548)
chr3 (556-652)||(13896824-13896920)
chr3 (588-652)||(19454299-19454363)
chr3 (562-650)||(51402348-51402436)
chr3 (588-652)||(51696522-51696586)
chr3 (462-603)||(43478827-43478969)
chr3 (520-650)||(2647648-2647780)
chr3 (549-652)||(49609405-49609508)
chr3 (461-603)||(4015126-4015268)
chr3 (590-652)||(7245155-7245217)
chr3 (527-648)||(41137718-41137829)
chr3 (500-601)||(2062359-2062460)
chr3 (462-603)||(8475761-8475902)
chr3 (588-652)||(43568927-43568991)
chr3 (520-650)||(49140793-49140928)
chr3 (520-650)||(54389787-54389922)
chr3 (498-601)||(14043897-14044000)
chr3 (462-584)||(4331836-4331958)
chr3 (462-584)||(19988394-19988516)
chr3 (489-603)||(27739564-27739678)
chr3 (489-603)||(34543133-34543247)
chr3 (489-603)||(3493550-3493665)
chr3 (489-603)||(3497244-3497359)
chr3 (498-603)||(7941081-7941186)
chr3 (520-650)||(34049072-34049207)
chr3 (524-603)||(16484453-16484532)
chr3 (524-603)||(48246409-48246488)
chr3 (494-603)||(4008320-4008429)
chr3 (554-652)||(34648150-34648250)
chr3 (462-603)||(42165098-42165239)
chr3 (489-574)||(50998706-50998791)
chr3 (527-603)||(12897824-12897900)
chr3 (502-574)||(16611075-16611147)
chr3 (502-574)||(22048106-22048178)
chr3 (500-603)||(45076246-45076350)
chr3 (524-603)||(2743395-2743474)
chr3 (524-575)||(4002737-4002788)
chr3 (524-575)||(16647172-16647223)
chr3 (524-603)||(19341591-19341670)
chr3 (524-603)||(28816998-28817077)
chr3 (489-603)||(11249521-11249635)
chr3 (497-575)||(17561729-17561807)
chr3 (555-649)||(46347672-46347766)
chr3 (503-576)||(20350594-20350667)
chr3 (515-603)||(6143659-6143747)
chr3 (528-603)||(600541-600616)
chr3 (524-575)||(19750039-19750090)
chr3 (602-652)||(2426559-2426609)
chr3 (549-603)||(4002502-4002556)
chr3 (497-575)||(16861099-16861177)
chr3 (462-603)||(10491962-10492103)
chr3 (502-603)||(32593109-32593210)
chr3 (462-569)||(2274947-2275054)
chr3 (498-601)||(11270283-11270386)
chr3 (557-648)||(20366222-20366313)
chr3 (503-575)||(34542132-34542201)
chr3 (502-603)||(10658798-10658899)
chr3 (524-601)||(48250868-48250945)
chr3 (520-575)||(46402374-46402430)
chr3 (462-601)||(47070402-47070542)
chr3 (526-578)||(50216876-50216928)
chr3 (462-574)||(52387719-52387831)
chr3 (524-575)||(596781-596832)
chr3 (528-575)||(2267031-2267078)
chr3 (489-603)||(2645417-2645532)
chr3 (524-602)||(3948725-3948804)
chr3 (544-603)||(3953212-3953271)
chr3 (462-603)||(11248492-11248630)
chr3 (524-575)||(13743290-13743341)
chr3 (524-603)||(13747716-13747794)
chr3 (614-645)||(18436766-18436797)
chr3 (524-603)||(34691622-34691701)
chr3 (497-600)||(41612338-41612441)
chr3 (489-603)||(41844361-41844476)
chr3 (588-650)||(46402417-46402483)
chr3 (528-575)||(49265789-49265836)
chr3 (522-584)||(11094107-11094168)
chr3 (498-600)||(34645533-34645635)
chr3 (489-574)||(42900138-42900224)
chr3 (461-507)||(43476124-43476170)
chr3 (554-603)||(10492870-10492919)
chr3 (497-550)||(17568010-17568063)
chr3 (522-599)||(19842499-19842576)
chr3 (612-645)||(20378724-20378757)
chr3 (498-603)||(24700692-24700797)
chr3 (489-603)||(12898687-12898798)
chr3 (524-600)||(19440253-19440329)
chr3 (550-602)||(20918009-20918061)
chr3 (550-602)||(20926971-20927023)
chr3 (524-576)||(23443130-23443182)
chr3 (515-575)||(32743195-32743255)
chr3 (515-603)||(45075334-45075422)
chr3 (500-544)||(48566454-48566498)
[»] scaffold0199 (2 HSPs)
scaffold0199 (522-652)||(12335-12466)
scaffold0199 (497-604)||(10622-10729)
[»] chr8 (86 HSPs)
chr8 (462-603)||(22550862-22551003)
chr8 (524-650)||(41858073-41858197)
chr8 (562-652)||(18441389-18441479)
chr8 (546-648)||(26451499-26451601)
chr8 (524-650)||(42602457-42602583)
chr8 (588-652)||(3395927-3395991)
chr8 (528-603)||(39601705-39601780)
chr8 (494-575)||(22547436-22547517)
chr8 (588-652)||(22547504-22547568)
chr8 (588-652)||(41274653-41274717)
chr8 (462-569)||(20854552-20854659)
chr8 (461-600)||(34366845-34366984)
chr8 (460-575)||(45409804-45409919)
chr8 (498-604)||(40740877-40740983)
chr8 (494-603)||(44933826-44933935)
chr8 (489-584)||(28617530-28617625)
chr8 (489-603)||(2335145-2335259)
chr8 (462-603)||(10749671-10749812)
chr8 (514-603)||(36595943-36596032)
chr8 (462-574)||(34371872-34371984)
chr8 (528-650)||(15033095-15033220)
chr8 (524-603)||(27501597-27501676)
chr8 (528-603)||(38604245-38604320)
chr8 (527-601)||(5533024-5533098)
chr8 (588-638)||(38871834-38871884)
chr8 (498-583)||(7120871-7120956)
chr8 (498-603)||(43520773-43520878)
chr8 (527-584)||(44841890-44841947)
chr8 (498-579)||(44885686-44885767)
chr8 (520-650)||(485996-486131)
chr8 (497-569)||(39831126-39831198)
chr8 (489-603)||(15030845-15030960)
chr8 (593-652)||(24860448-24860507)
chr8 (524-603)||(32584049-32584128)
chr8 (588-650)||(37779713-37779773)
chr8 (528-603)||(41016415-41016490)
chr8 (497-571)||(36127342-36127416)
chr8 (498-603)||(13782206-13782311)
chr8 (462-575)||(41250097-41250210)
chr8 (528-572)||(39939243-39939287)
chr8 (524-584)||(43363276-43363336)
chr8 (489-603)||(184549-184664)
chr8 (524-603)||(7121783-7121862)
chr8 (498-593)||(16939351-16939446)
chr8 (524-571)||(34235152-34235199)
chr8 (524-603)||(35962304-35962383)
chr8 (549-603)||(43262443-43262497)
chr8 (522-603)||(546418-546499)
chr8 (477-542)||(3696128-3696193)
chr8 (523-596)||(13783112-13783185)
chr8 (498-575)||(28694049-28694126)
chr8 (462-507)||(43262359-43262404)
chr8 (489-603)||(28618436-28618547)
chr8 (544-603)||(7344554-7344613)
chr8 (544-603)||(17924280-17924339)
chr8 (498-569)||(31745153-31745224)
chr8 (489-603)||(36677926-36678041)
chr8 (525-603)||(42481558-42481637)
chr8 (462-509)||(44050749-44050796)
chr8 (489-603)||(45066358-45066473)
chr8 (489-547)||(25588-25646)
chr8 (524-602)||(1114740-1114818)
chr8 (524-578)||(1116210-1116264)
chr8 (461-507)||(7577682-7577728)
chr8 (498-603)||(16940273-16940378)
chr8 (554-600)||(18438661-18438707)
chr8 (497-575)||(20859629-20859707)
chr8 (462-575)||(34503087-34503197)
chr8 (489-547)||(42485592-42485650)
chr8 (462-511)||(3641580-3641629)
chr8 (477-534)||(4528220-4528277)
chr8 (489-542)||(5532423-5532476)
chr8 (554-603)||(21406294-21406343)
chr8 (554-603)||(21800786-21800835)
chr8 (522-603)||(34892806-34892887)
chr8 (498-575)||(36345930-36346007)
chr8 (497-542)||(45252006-45252051)
chr8 (515-575)||(3085529-3085589)
chr8 (478-542)||(6268936-6269000)
chr8 (494-542)||(38603280-38603328)
chr8 (497-576)||(39491077-39491156)
chr8 (550-602)||(40077248-40077300)
chr8 (498-542)||(40745339-40745383)
chr8 (546-578)||(41276882-41276914)
chr8 (515-595)||(44727510-44727589)
chr8 (524-580)||(45454403-45454459)
[»] chr7 (58 HSPs)
chr7 (522-652)||(17838645-17838776)
chr7 (462-603)||(17834422-17834563)
chr7 (555-650)||(30355189-30355284)
chr7 (546-652)||(40587680-40587786)
chr7 (562-652)||(41047812-41047902)
chr7 (588-652)||(21188374-21188438)
chr7 (489-603)||(17840887-17841001)
chr7 (557-652)||(42682024-42682119)
chr7 (552-649)||(28980123-28980221)
chr7 (588-652)||(46863292-46863356)
chr7 (558-652)||(36394886-36394980)
chr7 (588-652)||(34139932-34139996)
chr7 (524-578)||(46738799-46738853)
chr7 (520-650)||(9367670-9367805)
chr7 (489-603)||(7031-7145)
chr7 (494-575)||(27657005-27657086)
chr7 (583-648)||(43686859-43686924)
chr7 (588-652)||(28115480-28115544)
chr7 (596-652)||(48269710-48269766)
chr7 (524-603)||(12210587-12210666)
chr7 (593-652)||(45364168-45364227)
chr7 (494-572)||(13921292-13921370)
chr7 (498-600)||(38555413-38555515)
chr7 (463-569)||(45256923-45257029)
chr7 (489-575)||(46908498-46908584)
chr7 (462-575)||(45258029-45258142)
chr7 (524-603)||(8044-8123)
chr7 (497-600)||(5541543-5541646)
chr7 (489-603)||(10098114-10098229)
chr7 (524-603)||(42583057-42583136)
chr7 (489-575)||(10516981-10517067)
chr7 (497-575)||(19804514-19804592)
chr7 (462-574)||(26833500-26833609)
chr7 (498-594)||(13644392-13644488)
chr7 (494-575)||(7975634-7975716)
chr7 (524-602)||(9494804-9494882)
chr7 (522-604)||(42499404-42499486)
chr7 (515-603)||(18105360-18105449)
chr7 (522-575)||(34139892-34139945)
chr7 (498-559)||(47521388-47521449)
chr7 (489-603)||(46907501-46907612)
chr7 (614-650)||(48316259-48316295)
chr7 (524-575)||(618750-618801)
chr7 (528-603)||(14102345-14102420)
chr7 (528-603)||(14412362-14412437)
chr7 (524-575)||(27453619-27453670)
chr7 (497-576)||(37345127-37345206)
chr7 (489-603)||(41884123-41884238)
chr7 (525-603)||(48407284-48407363)
chr7 (555-601)||(10705276-10705322)
chr7 (500-542)||(12080394-12080436)
chr7 (524-578)||(45361646-45361700)
chr7 (498-603)||(11886882-11886986)
chr7 (554-603)||(29112400-29112449)
chr7 (546-603)||(34738383-34738440)
chr7 (498-542)||(12081251-12081295)
chr7 (520-575)||(20564191-20564247)
chr7 (554-602)||(37340329-37340377)
[»] chr6 (53 HSPs)
chr6 (554-652)||(12783905-12784003)
chr6 (520-650)||(6204819-6204954)
chr6 (588-652)||(29061331-29061395)
chr6 (590-652)||(29065791-29065853)
chr6 (590-652)||(29074804-29074866)
chr6 (590-652)||(29079568-29079630)
chr6 (590-652)||(29107377-29107439)
chr6 (520-650)||(11691786-11691921)
chr6 (588-652)||(13401547-13401611)
chr6 (481-600)||(29097828-29097948)
chr6 (462-603)||(14012372-14012513)
chr6 (522-603)||(29076320-29076401)
chr6 (522-603)||(29109853-29109934)
chr6 (522-603)||(29111293-29111374)
chr6 (520-611)||(22305100-22305192)
chr6 (479-603)||(26351093-26351217)
chr6 (588-652)||(32034340-32034404)
chr6 (462-603)||(11840247-11840389)
chr6 (308-377)||(8983493-8983562)
chr6 (522-603)||(9048070-9048151)
chr6 (524-584)||(2109514-2109574)
chr6 (522-601)||(15888799-15888878)
chr6 (480-603)||(26349928-26350050)
chr6 (461-575)||(3501085-3501199)
chr6 (522-608)||(9049076-9049162)
chr6 (459-603)||(6760869-6761013)
chr6 (496-603)||(17597521-17597629)
chr6 (524-572)||(25554702-25554750)
chr6 (561-645)||(26855929-26856013)
chr6 (489-603)||(28249846-28249961)
chr6 (588-652)||(17596764-17596831)
chr6 (498-603)||(32223510-32223615)
chr6 (557-650)||(30258263-30258358)
chr6 (489-603)||(13382590-13382705)
chr6 (497-567)||(24719911-24719981)
chr6 (524-603)||(31768750-31768829)
chr6 (489-600)||(18351643-18351755)
chr6 (527-603)||(31146373-31146449)
chr6 (524-572)||(31151066-31151114)
chr6 (461-575)||(29061229-29061344)
chr6 (526-600)||(19757271-19757345)
chr6 (462-511)||(7361125-7361174)
chr6 (462-507)||(11687986-11688031)
chr6 (524-569)||(29065737-29065782)
chr6 (524-569)||(29074750-29074795)
chr6 (524-569)||(29079514-29079559)
chr6 (524-569)||(29107323-29107368)
chr6 (546-575)||(31771766-31771795)
chr6 (555-603)||(8193206-8193254)
chr6 (555-603)||(11157738-11157786)
chr6 (488-603)||(26712008-26712124)
chr6 (527-575)||(28362756-28362804)
chr6 (616-652)||(34634281-34634317)
[»] scaffold0192 (1 HSPs)
scaffold0192 (559-652)||(18847-18940)
[»] scaffold0176 (2 HSPs)
scaffold0176 (588-652)||(857-921)
scaffold0176 (522-575)||(817-870)
[»] scaffold0101 (2 HSPs)
scaffold0101 (520-644)||(36486-36615)
scaffold0101 (544-603)||(41019-41078)
[»] scaffold0180 (1 HSPs)
scaffold0180 (494-601)||(15621-15728)
[»] scaffold0283 (1 HSPs)
scaffold0283 (498-579)||(1634-1715)
[»] scaffold0038 (1 HSPs)
scaffold0038 (489-603)||(50008-50123)
[»] scaffold0504 (1 HSPs)
scaffold0504 (494-603)||(12349-12458)
[»] scaffold1379 (1 HSPs)
scaffold1379 (524-603)||(431-510)
[»] scaffold0341 (1 HSPs)
scaffold0341 (524-603)||(17348-17427)
[»] scaffold0184 (1 HSPs)
scaffold0184 (522-601)||(18292-18371)
[»] scaffold0078 (1 HSPs)
scaffold0078 (522-601)||(54473-54552)
[»] scaffold0016 (1 HSPs)
scaffold0016 (524-603)||(69218-69297)
[»] scaffold0494 (2 HSPs)
scaffold0494 (489-547)||(11507-11565)
scaffold0494 (524-603)||(5327-5407)
[»] scaffold0011 (1 HSPs)
scaffold0011 (485-575)||(236285-236375)
[»] scaffold0268 (1 HSPs)
scaffold0268 (524-572)||(15441-15489)
[»] scaffold0065 (1 HSPs)
scaffold0065 (523-603)||(65314-65394)
[»] scaffold0116 (1 HSPs)
scaffold0116 (524-603)||(15952-16031)
[»] scaffold0181 (1 HSPs)
scaffold0181 (608-642)||(21171-21205)
[»] scaffold0219 (1 HSPs)
scaffold0219 (462-511)||(20203-20252)
[»] scaffold0169 (1 HSPs)
scaffold0169 (462-511)||(1735-1784)
[»] scaffold0388 (1 HSPs)
scaffold0388 (555-603)||(13906-13954)
[»] scaffold0019 (1 HSPs)
scaffold0019 (497-584)||(134330-134414)


Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-137; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 66 - 448
Target Start/End: Original strand, 46267287 - 46267660
Alignment:
Q  66 aaaagatgtaagaggagtatgaatattagaaattggaaccaagaaaatatatcaatgttgataaaacctgtcacctagcactatggtttctaggcatctg 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||| |||    
T  46267287 aaaagatgtaagaggagtatgaatattagaaattggaaccaagaaaatata------------aaacctgtcacctagcactatggtttctaggcacctg 46267374  T
Q  166 aattgaatatagatgatgaaatgttccctgccactatatgacaacacataagtttgagtcttgcagcttaattcctattgtgtgtaacagttttgaacca 265  Q
     ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  46267375 cattgaatatagatgatgaaatgttccctgccactaaatgacaacatataagtttgagtcttgcagcttaattcctattgtgtgtaacag-tttgagcca 46267473  T
Q  266 gactaccatagcccgcatacagttccacaccatttcaggatcacaatttaatcatgataaattatattgttttgaactcttgcatgttagttgaaattag 365  Q
    ||||| ||||| || | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||    
T  46267474 gactatcatagtccacgtacagttccacaccatttcaggatcacaatttaatcatgataaattattttgttttgaactcttgcgtgttagttgaaataag 46267573  T
Q  366 gtttttctctccttgtc-tttcaagtaaatccgatgagcaaagaaaaaagaaagataatttagaaa---accaatatatgtatgcag 448  Q
    |||||||||||| | || |||||| |||||| ||||||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  46267574 gtttttctctccctctcttttcaaataaatctgatgagcaaagaaaaaagaaagataatttagaaatttaccaatctatgtatgcag 46267660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 554 - 652
Target Start/End: Complemental strand, 42572803 - 42572705
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||||||| ||||   | | || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42572803 ccggctgcagttaactgtcgaggttttcctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 42572705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 27487678 - 27487614
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27487678 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 27487614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 29763231 - 29763167
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29763231 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 29763167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 14174923 - 14174859
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14174923 agttaactgccgaggatcttctgctaaaaatctggcagaagctctctcatccattattcatctca 14174859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 520 - 650
Target Start/End: Original strand, 19159615 - 19159750
Alignment:
Q  520 ttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttct--gctac-a 615  Q
    ||||||||||||||| ||||||| |||| | ||||||||||||||||||||||| || || || || | ||||||||||||||||||||||  ||||| |    
T  19159615 ttcttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccaaggaaaacctcggtagttaactgccgaggatcttctgcgctacaa 19159714  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||||||||    
T  19159715 aatctggcagaatctcctctcatccattattcatct 19159750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 523 - 603
Target Start/End: Original strand, 19161888 - 19161968
Alignment:
Q  523 ttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||||||    
T  19161888 ttcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 19161968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 587 - 650
Target Start/End: Complemental strand, 49927514 - 49927451
Alignment:
Q  587 gagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 650  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49927514 gagttaactaccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 49927451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 555 - 652
Target Start/End: Original strand, 6434776 - 6434873
Alignment:
Q  555 cggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||| ||||  || || ||||| | ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  6434776 cggctgcagttatctgctaaggaaaacttcggtagttaactgccaaggatcttctgctacaaatctggtagaagcactctcatccattattcatctca 6434873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 556 - 652
Target Start/End: Original strand, 13972091 - 13972187
Alignment:
Q  556 ggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||| |||||| || || || | | | ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13972091 ggctgcagttaacagccgaggaaaacctcggtattaaacagccgaggatcttctgctacaaatctggcagaagctctctcatctattattcatctca 13972187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 638
Target Start/End: Original strand, 49395574 - 49395714
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    ||||||||||||| || ||||   |||||| ||||||  |||||| ||| | | | ||||||||||||||||||| ||   | | || | ||||||||||    
T  49395574 acacgagtaatttgtccaaatacccttcggtagttaatagccgaattttgaaagaaccggctgcagttaactgcctaggttttcctcggtagttaactgc 49395673  T
Q  598 cgaggatcttctgctacaaatctggcagaagctctctcatc 638  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  49395674 cgaggatcttctgctacaaatctggcagaagctctctcatc 49395714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 597 - 652
Target Start/End: Complemental strand, 26637259 - 26637204
Alignment:
Q  597 ccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26637259 ccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 26637204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 477 - 601
Target Start/End: Original strand, 22524076 - 22524200
Alignment:
Q  477 cacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgaga 576  Q
    |||||| ||||||| | |||||||||||||||||| |||||||  | ||| ||||||| |||||||||||||| || ||||| |||||||||| |||||     
T  22524076 cacatttcataaggttgtgccacacgagtaatttacctaaatgcccctcgacagttaagtgccgaagttttagtaaaccggcggcagttaactcccgagg 22524175  T
Q  577 aatacttcaggagttaactgccgag 601  Q
    || || || | ||||||||||||||    
T  22524176 aaaacctcggtagttaactgccgag 22524200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 590 - 652
Target Start/End: Original strand, 49426750 - 49426813
Alignment:
Q  590 ttaactgccgaggatcttctgctacaaatctggcagaagct-ctctcatccattattcatctca 652  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  49426750 ttaactgccgaggatcttctgctacaaatctggcagaatctcctctcatccattattcatctca 49426813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 586716 - 586602
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||| |||   ||||   ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| | |    
T  586716 ggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggca 586617  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  586616 gtaaactaccgagga 586602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 462 - 603
Target Start/End: Complemental strand, 18610033 - 18609892
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  ||||||  |||||||| || ||||||| || |||| |||| ||  ||| ||||||||| |||||||||||||| || ||||| ||    
T  18610033 gagaattgttgtttacacatttgataaggctgtgtcacacgaatattttacctaattgccctttggcagttaactgccgaagttttagtaaaccggcggc 18609934  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||| ||||| || ||||| | ||||||||||||||||    
T  18609933 agttaactaccgaggaaaacttcggcagttaactgccgagga 18609892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 611
Target Start/End: Complemental strand, 13636203 - 13636111
Alignment:
Q  520 ttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgc 611  Q
    ||||||||||||||| ||||||| |||| | |||||||||||||||||||||||||| || || || | ||||||||||||||||||| ||||    
T  13636203 ttcttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctcctgc 13636111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 44596896 - 44596960
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||| ||| |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  44596896 agttaactgctgagtatcttctgctacaaatttggcagaaactctctcatccattattcatctca 44596960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 574
Target Start/End: Complemental strand, 48228404 - 48228328
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccga 574  Q
    |||||||||| |||   |||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  48228404 acacgagtaaattactcaaatgtccttcggcagttaactgccgaagttttagaaatctggctgcagttaactgccga 48228328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 463 - 574
Target Start/End: Complemental strand, 98060 - 97949
Alignment:
Q  463 agaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgca 562  Q
    ||||||| ||||  ||||||  |||||||| ||||||||||||| |||| ||||||| |||||  ||||||| |||||||||||||| ||  |||| |||    
T  98060 agaattgttgtttacacatttgataaggctgtgccacacgagtattttacctaaatgctcttcaacagttaactgccgaagttttagtaaatcggcggca 97961  T
Q  563 gttaactgccga 574  Q
    ||||||||||||    
T  97960 gttaactgccga 97949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 44598982 - 44598903
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||  || |||| |||||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  44598982 tcggcagttacctgtcgaaattttagtaatccggctgcagttaactgccgaggaaaacttcgggagttaactgccgagga 44598903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 501 - 600
Target Start/End: Complemental strand, 50344067 - 50343968
Alignment:
Q  501 cgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    ||||||||||| ||||||| || ||||||||||| ||||||||||||||||| ||||| |||||||||| ||||  | | | |||| |||||||||||||    
T  50344067 cgagtaatttacctaaatgctcatcggcagttaactgccgaagttttagaaaaccggcggcagttaactcccgaagatttcctcagcagttaactgccga 50343968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 603
Target Start/End: Original strand, 9618656 - 9618794
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  |||||||||||||||| || ||||||||||||||| | |||||||| | ||||||||| ||||||| || | |||  ||||||||    
T  9618656 gagaattgttgttgacacattgcataaggctgtgtcacacgagtaatttaccgaaatgttccttggcagttaactgccgaa-ttatggaa--ccggctgc 9618752  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||| ||||| || ||||| | ||| |||| |||||||    
T  9618753 agttaactaccgaggaaaacttcggcagtaaactcccgagga 9618794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 558 - 652
Target Start/End: Original strand, 13147527 - 13147621
Alignment:
Q  558 ctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||| ||||| || || ||   ||||||||| ||| ||||||||||||||||||||| | || ||||||||||||||||||||||||    
T  13147527 ctgcagttaactaccgaggaaaacctcgacagttaactgtcgatgatcttctgctacaaatctggtaaaaactctctcatccattattcatctca 13147621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 584
Target Start/End: Original strand, 30194416 - 30194478
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||    
T  30194416 cttcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttc 30194478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 546 - 603
Target Start/End: Original strand, 9710597 - 9710654
Alignment:
Q  546 ttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  9710597 ttagaaatccggctgcagttaactgccgaggaaaacttcgggagttaactgccgagga 9710654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 522 - 603
Target Start/End: Original strand, 29424375 - 29424456
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||| ||||||||||| | ||| |||||||||||||||| ||||| || ||||| | ||||||||||||||||    
T  29424375 cttcggcagttaattgccgaagtttaaaaaaaccggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 29424456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 498 - 575
Target Start/End: Complemental strand, 49429237 - 49429160
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||||| |||   ||||| |||||||||||||| |||||||||||||||||||||||||||||||  |||||||    
T  49429237 acacgagtaaattactcaaatgctcttcggcagttaactgccgaagttttagaaatccggctgcagttagttgccgag 49429160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 495 - 575
Target Start/End: Complemental strand, 49661838 - 49661758
Alignment:
Q  495 gccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||| ||||  |||||||| |||| | |||| || ||||||||||||||| |||||||||||||||||||||    
T  49661838 gccacacgagtaaattattcaaatgttcctcggtaattaattgtcgaagttttagaaatacggctgcagttaactgccgag 49661758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 592 - 652
Target Start/End: Original strand, 51269003 - 51269063
Alignment:
Q  592 aactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||| |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  51269003 aactaccgaggatcttctgctacaaatttagcagaagctctctcattcattattcatctca 51269063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 528 - 603
Target Start/End: Original strand, 4883234 - 4883309
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |||||||    
T  4883234 cagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaactaccgagga 4883309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 489 - 584
Target Start/End: Original strand, 19914428 - 19914523
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    |||| |||||||||||||| |||   |||||  | ||||||||||| | |||||||||||||||| ||||||||||||||||||||| || |||||    
T  19914428 ggctgtgccacacgagtaaattactcaaatgcccctcggcagttaacttccgaagttttagaaatacggctgcagttaactgccgaggaaaacttc 19914523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 29765605 - 29765554
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  29765605 tcggcagttaactgccgaagttttagaaatccggttgcagttaactgccgag 29765554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 44470087 - 44470008
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| |  || ||||||||||||||||||||||||||| || || || ||||||||||||||||||    
T  44470087 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 44470008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 46886463 - 46886385
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| ||||||| || || || | ||||||||||||||||    
T  46886463 tcggcagttaactgccgaagttttagaaatccggctgtagttaagtgccgaggaaaac-tcggtagttaactgccgagga 46886385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 599
Target Start/End: Complemental strand, 51271667 - 51271592
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccg 599  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || || |  |||||||||||    
T  51271667 tcggcagttaactgccgaagttttagaaatccggctgcagttaattgccgaggaaaacctcggtggttaactgccg 51271592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 575
Target Start/End: Original strand, 94404 - 94457
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||| |||||    
T  94404 cttcggcagttaactgccgaagttttagaaatccagctgcagttaactaccgag 94457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 575
Target Start/End: Original strand, 49426708 - 49426761
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  49426708 cttcggcagttaaccgccgaagttttagaaatccggctgcaattaactgccgag 49426761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 600 - 648
Target Start/End: Original strand, 4208454 - 4208502
Alignment:
Q  600 aggatcttctgctacaaatctggcagaagctctctcatccattattcat 648  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  4208454 aggatcttctgctacaaatctaccagaagctctctcatccattattcat 4208502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 29435034 - 29435097
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||| |||||| || |||||||||| ||||||||| |||||||||||||||||||||||    
T  29435034 agttaactgcagaggatttt-tgctacaaatttggcagaagttctctcatccattattcatctca 29435097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 523 - 603
Target Start/End: Complemental strand, 46217395 - 46217315
Alignment:
Q  523 ttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||| ||||||||||| | |||  ||||||||||||||| ||||| || ||||| | ||||||||||||||||    
T  46217395 ttcggcagttaattgccgaagtttgaaaaaatcggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 46217315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 497 - 569
Target Start/End: Complemental strand, 47505988 - 47505916
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaact 569  Q
    |||| ||||||||||||||||||    ||||||||||| |||||||||||||||||  |||||||||||||||    
T  47505988 cacaagagtaatttatctaaatgcctctcggcagttaattgccgaagttttagaaaatcggctgcagttaact 47505916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 571
Target Start/End: Complemental strand, 2425761 - 2425714
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgc 571  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  2425761 tcggcagttaactgccgaagttttggaaatccggctgcagttaactgc 2425714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 15047279 - 15047358
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| |  || ||||||||||||||||||||||||||| ||| | || | ||||||||||||||||    
T  15047279 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaattcctcggtagttaactgccgagga 15047358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 497 - 568
Target Start/End: Original strand, 21140995 - 21141066
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaac 568  Q
    ||||||||||||||| |||||||| ||||| || |||| ||||||||||||||||| ||| | |||||||||    
T  21140995 cacacgagtaatttacctaaatgtccttcgacaattaactgccgaagttttagaaaaccgacggcagttaac 21141066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 571
Target Start/End: Original strand, 44596858 - 44596905
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgc 571  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  44596858 tcggcagttaactgccgaagttttagaaatccggttgcagttaactgc 44596905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 652
Target Start/End: Original strand, 36908640 - 36908699
Alignment:
Q  597 ccgaggatcttctgctacaaatctggcagaagctctc----tcatccattattcatctca 652  Q
    ||||||| |||||||||||||||||||||||||||||    |||||||||||||||||||    
T  36908640 ccgaggagcttctgctacaaatctggcagaagctctctcattcatccattattcatctca 36908699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 603
Target Start/End: Complemental strand, 45977821 - 45977695
Alignment:
Q  477 cacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgaga 576  Q
    |||||| ||||||||| ||||| ||||||| ||||   ||||||  |||||||||||| |||||||||||||| || |||||   ||| ||||||||||     
T  45977821 cacattacataaggctgtgccatacgagtactttacgaaaatgtcattcggcagttaactgccgaagttttagtaaaccggcgaaagtaaactgccgagg 45977722  T
Q  577 aatacttcaggagttaactgccgagga 603  Q
    || |||||   |||||||||| |||||    
T  45977721 aaaacttcgatagttaactgcagagga 45977695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 461 - 578
Target Start/End: Original strand, 14985272 - 14985389
Alignment:
Q  461 ggagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctg 560  Q
    ||||||||| ||||  |||||| ||||||||| || ||||| |||| ||||   |||||  ||||| ||||||| |||||||||||||| ||  |||| |    
T  14985272 ggagaattgctgtttacacattacataaggctgtgtcacactagtactttacgaaaatgcccttcgacagttaactgccgaagttttagtaaatcggcgg 14985371  T
Q  561 cagttaactgccgagaaa 578  Q
    ||||||||| ||||||||    
T  14985372 cagttaactaccgagaaa 14985389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 645
Target Start/End: Complemental strand, 24364810 - 24364680
Alignment:
Q  515 aaatgttcttcggcagttaaatgccga--agttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgct 612  Q
    |||||||||||||||||||| ||||||  || |||| ||||| || ||||||||||| | ||| || || ||   ||||||||||||| |  ||  ||||    
T  24364810 aaatgttcttcggcagttaactgccgaggaggttta-aaatc-ggttgcagttaactactgaggaaaacctcgacagttaactgccgatgcgctcttgct 24364713  T
Q  613 acaaatctggcagaagctctctcatccattatt 645  Q
    ||||||||||||||||||||| |||||||||||    
T  24364712 acaaatctggcagaagctctcacatccattatt 24364680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 559 - 652
Target Start/End: Complemental strand, 29709352 - 29709259
Alignment:
Q  559 tgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||  |||||| |  |||  ||||||||| | | |||||| ||||| |||||| ||||||||||| |||||||||||||||||||    
T  29709352 tgcagttaactgatgagaaaaatctcaatagttaactgtcaaagatcttttgctataaatctagcagaagctctttcatccattattcatctca 29709259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 603
Target Start/End: Complemental strand, 9711724 - 9711648
Alignment:
Q  527 gcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||| |||||| |  ||||||||||||  |||||||||||||||| || || || ||||||||||||||||||    
T  9711724 gcagttaactgccgaggaattagaaatccggtcgcagttaactgccgaggaaaacctcgggagttaactgccgagga 9711648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 600
Target Start/End: Original strand, 52802127 - 52802203
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    ||||||||||| |||||| |  || ||||||||||||||||||||||||||| || || || | |||||||||||||    
T  52802127 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccga 52802203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 2365196 - 2365311
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaag-ttttagaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| | | |||||||  ||||||||||||| |||||||| |||||| || ||||| |||| ||||| ||||| ||| | |  |     
T  2365196 ggctgtgccacacgagtaaatgacctaaatgcccttcggcagttaactgccgaagtttttagtaaaccggcggcagctaactaccgaggaattccttggc 2365295  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  2365296 agttaactgccgagga 2365311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 6562237 - 6562158
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| |  || ||||||||||||||||||||||||||| ||  | || | ||||||||||||||||    
T  6562237 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgagga 6562158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 575
Target Start/End: Original strand, 22397778 - 22397868
Alignment:
Q  486 taaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgag 575  Q
    ||||||| ||||||||||||||  || | ||||   ||||||||||||| |||||||||||| || || ||||| ||||||||||||||||    
T  22397778 taaggctgtgccacacgagtaaaataccaaaatacccttcggcagttaactgccgaagttttgagtaaaccggcggcagttaactgccgag 22397868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 614 - 652
Target Start/End: Original strand, 41779766 - 41779804
Alignment:
Q  614 caaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  41779766 caaatctagcagaagctctctcatccattattcatctca 41779804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 603
Target Start/End: Complemental strand, 29425414 - 29425333
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||| || |||||||| | |||  ||| ||||||||||| ||||| || ||||| | ||||||||||||||||    
T  29425414 cttcggcagttaactgtcgaagtttgaaaaaatcggttgcagttaactaccgaggaaaacttcggtagttaactgccgagga 29425333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 542
Target Start/End: Original strand, 46908341 - 46908406
Alignment:
Q  477 cacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    |||||||||||||||| || | ||||||||||||| | ||||| || ||||||||||| |||||||    
T  46908341 cacattgcataaggctgtgtcgcacgagtaatttaccgaaatgctcatcggcagttaattgccgaa 46908406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 585616 - 585727
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| ||||||| |||||||||| | |||||  |||||||| |||| |||||||   |||  || |||||||||||||||||||||| || ||||| | |    
T  585616 ggctatgccacaggagtaatttacccaaatgcccttcggcaattaactgccgaa---ttatgaaaccggctgcagttaactgccgaggaaaacttcggca 585712  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  585713 gtaaactaccgagga 585727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 515 - 603
Target Start/End: Complemental strand, 31783800 - 31783712
Alignment:
Q  515 aaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| ||||| ||||||| || ||||||||||| ||   ||| | |||||||||||||| || || || ||||||||||||||||||    
T  31783800 aaatgtccttcgacagttaactgtcgaagttttagtaaattggcggtagttaactgccgaggaaaacctcgggagttaactgccgagga 31783712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 542
Target Start/End: Complemental strand, 6328965 - 6328922
Alignment:
Q  499 cacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    |||||||||||||||||||||||  ||||||||||| |||||||    
T  6328965 cacgagtaatttatctaaatgtttctcggcagttaactgccgaa 6328922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 603
Target Start/End: Complemental strand, 19928887 - 19928808
Alignment:
Q  525 cggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||| |||||||||||| || || ||||| |||||||| ||||||| || || || | ||||||||||||||||    
T  19928887 cggcagttaactgccgaagtttttaggaagccggcggcagttaagtgccgagtaaaacctcggtagttaactgccgagga 19928808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 603
Target Start/End: Complemental strand, 20353991 - 20353932
Alignment:
Q  544 ttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| || ||||| |||||||||||||||| || ||||| | ||||||||||||||||    
T  20353991 ttttaggaaaccggcggcagttaactgccgaggaaaacttcggtagttaactgccgagga 20353932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 23359425 - 23359346
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| |  || ||||||||||||||||||||| ||||| || || || | ||| ||||||||||||    
T  23359425 tcggcagttaattgccgaggaatttgaaatccggctgcagttaactaccgaggaaaacctcggtagtaaactgccgagga 23359346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 603
Target Start/End: Original strand, 38771646 - 38771705
Alignment:
Q  544 ttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| || ||||| |||||||||||||||| || || || ||||||||||||||||||    
T  38771646 ttttaggaaaccggcggcagttaactgccgaggaaaacctcgggagttaactgccgagga 38771705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 601
Target Start/End: Original strand, 44336268 - 44336323
Alignment:
Q  546 ttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    |||||||| ||||||||||||||||||||| || || || | ||||||||||||||    
T  44336268 ttagaaattcggctgcagttaactgccgaggaaaacctcggtagttaactgccgag 44336323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 507
Target Start/End: Original strand, 253027 - 253073
Alignment:
Q  461 ggagaattgatgttctcacattgcataaggctttgccacacgagtaa 507  Q
    ||||||||| ||||| |||||| ||||||||| ||||||||||||||    
T  253027 ggagaattgctgttcccacattacataaggctgtgccacacgagtaa 253073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 532
Target Start/End: Original strand, 640987 - 641057
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagtt 532  Q
    |||||||| ||||  |||||||||||||||| || ||||| ||||||||| | ||||| || |||||||||    
T  640987 gagaattgttgttgacacattgcataaggctgtgtcacactagtaatttaccgaaatgctcatcggcagtt 641057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 485 - 547
Target Start/End: Original strand, 19155972 - 19156034
Alignment:
Q  485 ataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt 547  Q
    |||||||| |||||||||||| ||||| ||||||| ||||||| |||||| ||  ||||||||    
T  19155972 ataaggctgtgccacacgagtcatttacctaaatgctcttcggtagttaactgttgaagtttt 19156034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 507
Target Start/End: Original strand, 20114538 - 20114584
Alignment:
Q  461 ggagaattgatgttctcacattgcataaggctttgccacacgagtaa 507  Q
    ||||||||| ||||| |||||| ||||||||| ||||||||||||||    
T  20114538 ggagaattgttgttcccacattacataaggctgtgccacacgagtaa 20114584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 524 - 578
Target Start/End: Original strand, 27485056 - 27485110
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaa 578  Q
    ||||||||||| |||| | |  ||| |||||||||||||||||||||||||||||    
T  27485056 tcggcagttaactgcctaggaattaaaaatccggctgcagttaactgccgagaaa 27485110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 578
Target Start/End: Complemental strand, 27650114 - 27650016
Alignment:
Q  477 cacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgaga 576  Q
    |||||||||||||||| || ||||| ||||||||| | |||||  | ||||||||||| ||||||| || | |||  || ||||||||||||| ||||||    
T  27650114 cacattgcataaggctgtgtcacactagtaatttaccgaaatgcccctcggcagttaactgccgaa-ttatggaa--ccagctgcagttaactaccgaga 27650018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 35527051 - 35526983
Alignment:
Q  588 agttaactgccgaggatcttctgctac--aaatctggcagaagctc--tctcatccattattcatctca 652  Q
    |||||||||  ||||||||||||||||  |||| |||||||| |||  |||||||||||||||||||||    
T  35527051 agttaactgtagaggatcttctgctacaaaaatatggcagaacctctatctcatccattattcatctca 35526983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 584
Target Start/End: Complemental strand, 51291723 - 51291602
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  ||||||||||||| || || ||||||||||||||||  |||||    ||||||||||| ||||||| | |  | ||| |||||||    
T  51291723 gagaattgttgttgacacattgcataagactatgtcacacgagtaatttattgaaatgcctctcggcagttaattgccgaattatatggaat-cggctgc 51291625  T
Q  562 agttaactgccgagaaatacttc 584  Q
    |||||||| ||||| || |||||    
T  51291624 agttaactaccgaggaaaacttc 51291602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 575
Target Start/End: Original strand, 4208367 - 4208444
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||   |||| | ||||||||||||| ||||||| ||| |   | ||||||||||||||||||||||    
T  4208367 acacgagtaatttactcaaatatccttcggcagttaactgccgaattttgaaggaaccggctgcagttaactgccgag 4208444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 524 - 601
Target Start/End: Original strand, 6557912 - 6557989
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    ||||||||||| |||||| |  || ||||| ||||||||||||||||||||| || |  || | ||||||||||||||    
T  6557912 tcggcagttaactgccgaggaatttgaaattcggctgcagttaactgccgaggaaaatctcggtagttaactgccgag 6557989  T

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Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 575
Target Start/End: Original strand, 12627210 - 12627287
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||||||||| | ||||   |||||| |||||| ||||||| ||||| | | |||| |||||||||||||||||    
T  12627210 acacgagtaatttacccaaatacccttcggtagttaattgccgaaattttaaagaaccgggtgcagttaactgccgag 12627287  T

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Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 26944413 - 26944458
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaa 507  Q
    |||||||| ||||| |||||| ||||||||| ||||||||||||||    
T  26944413 gagaattgttgttcccacattacataaggctgtgccacacgagtaa 26944458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 32161431 - 32161386
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaa 507  Q
    |||||||| ||||| |||||| ||||||||| ||||||||||||||    
T  32161431 gagaattgttgttcccacattacataaggctgtgccacacgagtaa 32161386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 579
Target Start/End: Original strand, 42290295 - 42290348
Alignment:
Q  526 ggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaat 579  Q
    ||||||||| ||||||| ||||| |||  |||||||||||||||| ||||||||    
T  42290295 ggcagttaactgccgaaattttaaaaaatcggctgcagttaactgtcgagaaat 42290348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 47653780 - 47653704
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||||   ||| ||| |||||||||||||||||||||| || ||||| | ||| |||| |||||||    
T  47653780 tcggcagttaactgccgaa---ttataaaaccggctgcagttaactgccgaggaaaacttcggcagtaaactaccgagga 47653704  T

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Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 550 - 603
Target Start/End: Complemental strand, 48751460 - 48751407
Alignment:
Q  550 aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||||||| ||||||| || || || | ||||||||||||||||    
T  48751460 aaatccggctgcagttaattgccgaggaaaacctcggtagttaactgccgagga 48751407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 602
Target Start/End: Original strand, 11183209 - 11183261
Alignment:
Q  550 aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagg 602  Q
    |||||||||||||||||||||||||| || || || | ||||||||| |||||    
T  11183209 aaatccggctgcagttaactgccgaggaaaacctcggtagttaactgtcgagg 11183261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 524 - 600
Target Start/End: Complemental strand, 13761120 - 13761044
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    ||||||||||| ||||  | ||||| | | |||||||||||||||||||||| || |||||   |||||||||||||    
T  13761120 tcggcagttaactgcctcaattttaaagaaccggctgcagttaactgccgaggaaaacttcgacagttaactgccga 13761044  T

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Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 501 - 601
Target Start/End: Original strand, 15695768 - 15695868
Alignment:
Q  501 cgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    ||||||||||| | ||||  ||||| ||||||||  || |||||||||||||  | |||| | ||||||| |||| || ||||| | |||||||||||||    
T  15695768 cgagtaatttacccaaattctcttctgcagttaaccgctgaagttttagaaaatcagctgtaattaactgtcgaggaaaacttcggcagttaactgccga 15695867  T
Q  601 g 601  Q
    |    
T  15695868 g 15695868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 578
Target Start/End: Original strand, 19495089 - 19495117
Alignment:
Q  550 aaatccggctgcagttaactgccgagaaa 578  Q
    |||||||||||||||||||||||||||||    
T  19495089 aaatccggctgcagttaactgccgagaaa 19495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 31945938 - 31945858
Alignment:
Q  524 tcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| ||||| || || ||||| |||||||||| ||||| ||| | || | ||||||||||||||||    
T  31945938 tcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaattcctcggtagttaactgccgagga 31945858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 602 - 650
Target Start/End: Complemental strand, 44338264 - 44338216
Alignment:
Q  602 gatcttctgctacaaatctggcagaagctctctcatccattattcatct 650  Q
    |||||||||||||||||||  || ||| ||||||||| |||||||||||    
T  44338264 gatcttctgctacaaatctatcataagttctctcatctattattcatct 44338216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 498 - 542
Target Start/End: Original strand, 49502075 - 49502119
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    |||||||||||||| ||||||| || ||||||||||| |||||||    
T  49502075 acacgagtaatttacctaaatgctcctcggcagttaactgccgaa 49502119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 210; Significance: 1e-114; HSPs: 104)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 66 - 307
Target Start/End: Original strand, 55859300 - 55859541
Alignment:
Q  66 aaaagatgtaagaggagtatgaatattagaaattggaaccaagaaaatatatcaatgttgataaaacctgtcacctagcactatggtttctaggcatctg 165  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  55859300 aaaagatgtaagaggagtatgaatatttgaaattggaaccaagaaaatatatcaatgttgatgaaacctgtcacctagcactatggtttctaggcacctg 55859399  T
Q  166 aattgaatatagatgatgaaatgttccctgccactatatgacaacacataagtttgagtcttgcagcttaattcctattgtgtgtaacagttttgaacca 265  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  55859400 aattgaatatagatgatgaaatgttccctgccactaaatgacaacatataagtttgagtcttgcagcttaattcttattgtgtgtaacagttttgagcca 55859499  T
Q  266 gactaccatagcccgcatacagttccacaccatttcaggatc 307  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  55859500 gactaccatagcccacatacagttccacaccatttcaggatc 55859541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 65 - 307
Target Start/End: Complemental strand, 35204335 - 35204085
Alignment:
Q  65 aaaaagatgtaagaggagtatgaatattagaaattggaaccaagaaaatatatca----atgttgataaaacctgt----cacctagcactatggtttct 156  Q
    ||||| |||||| ||||||||||||||| ||| |||||||||||||||||||| |     ||||||||||||||||    ||||||||| ||||||||||    
T  35204335 aaaaaaatgtaataggagtatgaatattggaagttggaaccaagaaaatatatgagtgtttgttgataaaacctgtcatgcacctagcattatggtttct 35204236  T
Q  157 aggcatctgaattgaatatagatgatgaaatgttccctgccactatatgacaacacataagtttgagtcttgcagcttaattcctattgtgtgtaacagt 256  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35204235 aggcacctgaattgaatatagatgatgaaatgttccctgccactaaatgacaacatataagtttgagtcttgcagcttaattcctattgtgtgtaacagt 35204136  T
Q  257 tttgaaccagactaccatagcccgcatacagttccacaccatttcaggatc 307  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||||||||    
T  35204135 tttgagccagactatcatagcccacatacagttccacaccatttcaggatc 35204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 304 - 448
Target Start/End: Complemental strand, 45148526 - 45148379
Alignment:
Q  304 gatcacaatttaatcatgataaattatattgttttgaactcttgcatgttagttgaaattaggtttttctctccttgtc-tttcaagtaaatccgatgag 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||| ||||||||||||     
T  45148526 gatcacaatttaatcatgataaattatattgttttgaactcttgcatgttagttgaaattaggtttttctctccctctcttttcaaataaatccgatgaa 45148427  T
Q  403 caaagaaaaaagaaagataatttagaaa---accaatatatgtatgcag 448  Q
    | ||||||||||||||||||||||||||   |||||| |||||||||||    
T  45148426 c-aagaaaaaagaaagataatttagaaatttaccaatctatgtatgcag 45148379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 550 - 652
Target Start/End: Original strand, 56138275 - 56138377
Alignment:
Q  550 aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatc 649  Q
    |||||||||||||||||||||||||| || || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56138275 aaatccggctgcagttaactgccgaggaaaacctcagtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatc 56138374  T
Q  650 tca 652  Q
    |||    
T  56138375 tca 56138377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 522 - 650
Target Start/End: Original strand, 28081453 - 28081582
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctg 621  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||| || |  ||   |||||| || ||||||||||||||||||||||||    
T  28081453 cttcggcagttaactgccgaagttttagaaatccgactgcagttaactgccgaggaaaatctcgttagttaagtgtcgaggatcttctgctacaaatctg 28081552  T
Q  622 gcagaagct-ctctcatccattattcatct 650  Q
    |||||| || ||||||||||||||||||||    
T  28081553 gcagaatctcctctcatccattattcatct 28081582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 465 - 575
Target Start/End: Complemental strand, 34530904 - 34530794
Alignment:
Q  465 aattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagt 564  Q
    ||||| ||||| ||||||||||||||||  ||||||||| ||||||| |||||||| ||||||||||||| || |||||||||||||||| |||||||||    
T  34530904 aattgttgttcccacattgcataaggctgggccacacgaataatttacctaaatgtccttcggcagttaactgtcgaagttttagaaatctggctgcagt 34530805  T
Q  565 taactgccgag 575  Q
    |||||||||||    
T  34530804 taactgccgag 34530794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 524 - 648
Target Start/End: Original strand, 1041932 - 1042056
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggc 623  Q
    ||||||||||| |||||| |  ||||||||||| ||||||||||||||||||||| |  || | |||||||||||||||||||||| |||||||||||||    
T  1041932 tcggcagttaactgccgaggaattagaaatccgactgcagttaactgccgagaaaaatctcggtagttaactgccgaggatcttctactacaaatctggc 1042031  T
Q  624 agaagctctctcatccattattcat 648  Q
    | |||||||||||| |||| |||||    
T  1042032 ataagctctctcattcattgttcat 1042056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 520 - 650
Target Start/End: Original strand, 55793912 - 55794047
Alignment:
Q  520 ttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| |||| | |||||||||||||||||||||||||| || || || |||||||||||||||||||||||||  |||| |    
T  55793912 ttcttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggatcttctgcactacaa 55794011  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||||||||    
T  55794012 aatctggcagaatctcctctcatccattattcatct 55794047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 554 - 652
Target Start/End: Complemental strand, 958640 - 958542
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||| ||||||||||||||||| || || || | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  958640 ccggttgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatccggcagaagctctctcatccattattcttctca 958542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 554 - 652
Target Start/End: Complemental strand, 44561376 - 44561278
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||| ||||| || |  || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44561376 ccggctgcagttaactaccgaggaaaatctcggtagttaactgccgaggatcgtctgctacaaatctggcagaagctctctcatccattattcatctca 44561278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 34530807 - 34530743
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34530807 agttaactgccgaggatcttctgctacaaatttggcagaagctctctcatccattattcatctca 34530743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 39588127 - 39588191
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39588127 agttaactgccgaggatcttctgctacaaatatggcagaagctctctcatccattattcatctca 39588191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 485 - 574
Target Start/End: Original strand, 3183939 - 3184028
Alignment:
Q  485 ataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccga 574  Q
    |||||||| ||||||||||||| ||||||||||||| ||||| ||||||| |||||||||||||| || ||||| |||||||||||||||    
T  3183939 ataaggctgtgccacacgagtattttatctaaatgtccttcgacagttaactgccgaagttttagtaaaccggcggcagttaactgccga 3184028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 462 - 603
Target Start/End: Complemental strand, 28235699 - 28235558
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  |||||| ||||||||| | ||||||||||| ||||   |||||  ||||||||||||| |||||||||||||| || ||||| ||    
T  28235699 gagaattgttgtttacacattacataaggctgtaccacacgagtattttacgaaaatgcccttcggcagttaactgccgaagttttagtaaaccggcggc 28235600  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||| || ||||| | |||||||| |||||||    
T  28235599 agttaactgccgaggaaaacttctgcagttaactcccgagga 28235558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 520 - 650
Target Start/End: Complemental strand, 6178191 - 6178056
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| ||||   |||||||||||||||||||||||||| || || || | |||||||||||||||||||||||  |||| |    
T  6178191 ttcttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaa 6178092  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  6178091 aatctggcagaatctcctctcatccattattgatct 6178056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 34154440 - 34154376
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34154440 agttaactgcagaggatcttctgctacaaatctggcagaagctctctcatctattattcatctca 34154376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 520 - 650
Target Start/End: Original strand, 49094076 - 49094211
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| ||||   |||||||||||||||||||||||||| || || || | |||||||||||||||||||||||  |||| |    
T  49094076 ttcttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaa 49094175  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  49094176 aatctggcagaatctcctctcatccattattgatct 49094211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 51429341 - 51429277
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  51429341 agttaactgtcgaggatcttctgctacaaatctggaagaagctctctcatccattattcatctca 51429277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 56304911 - 56304975
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  56304911 agttaattgccgaggattttctgctacaaatctggcagaagctctctcatccattattcatctca 56304975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 520 - 650
Target Start/End: Complemental strand, 21018085 - 21017951
Alignment:
Q  520 ttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttct--gctacaa 616  Q
    ||||||||||||||| ||| ||| |||| | ||||||||||||| |||||||||||| || || || | ||||||||||||| ||||||||  |||||||    
T  21018085 ttcttcggcagttaactgctgaaattttgaaaaatccggctgcaattaactgccgaggaaaacctcggcagttaactgccgatgatcttctgagctacaa 21017986  T
Q  617 atctggcagaagct-ctctcatccattattcatct 650  Q
    ||||||||||| || |||||||| |||||||||||    
T  21017985 atctggcagaatctcctctcatctattattcatct 21017951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 588 - 650
Target Start/End: Complemental strand, 6283479 - 6283417
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 650  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  6283479 agttaactgccgaggatcttctgcttcaaatctggccgaagctctctcatccattattcatct 6283417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 21022999 - 21022885
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||| |||   |||||  | ||||||||||| |||||||||||||||||| ||||||||||||||||||||| || || || | |    
T  21022999 ggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacctcggta 21022900  T
Q  589 gttaactgccgagga 603  Q
    |||||||||||||||    
T  21022899 gttaactgccgagga 21022885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 462 - 574
Target Start/End: Complemental strand, 3186202 - 3186090
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  ||||||  |||||||| ||||||||||||| |||| |||||||| ||||| ||||||| ||| |||||||||| || ||||| ||    
T  3186202 gagaattgctgtttacacatttgataaggctgtgccacacgagtattttacctaaatgtccttcgacagttaactgcagaagttttagtaaaccggcggc 3186103  T
Q  562 agttaactgccga 574  Q
    |||||||||||||    
T  3186102 agttaactgccga 3186090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 524 - 600
Target Start/End: Original strand, 16983519 - 16983595
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || || | |||||||||||||    
T  16983519 tcggcagttaactgccgaagttttagaaatccggctacagttaactgccgagaaaaacctcggtagttaactgccga 16983595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 554 - 634
Target Start/End: Complemental strand, 29700348 - 29700268
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctct 634  Q
    |||||||||||||||||||||| || || || | |||||| |||||| |||||||||||||||||||||||||||||||||    
T  29700348 ccggctgcagttaactgccgaggaaaacctcggtagttaattgccgatgatcttctgctacaaatctggcagaagctctct 29700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 463 - 603
Target Start/End: Original strand, 56565693 - 56565833
Alignment:
Q  463 agaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgca 562  Q
    ||||||| ||||  |||||| ||||||||| ||||||||||||| ||||   ||||  ||||| |||||||| || ||||||||||| || ||||| |||    
T  56565693 agaattgctgtttacacattacataaggctgtgccacacgagtagtttacgaaaattctcttcagcagttaactgtcgaagttttagtaaaccggcggca 56565792  T
Q  563 gttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||| || || || |||||||||| |||||||    
T  56565793 gttaactgccgaggaaaacctcgggagttaactaccgagga 56565833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 16984237 - 16984158
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| || || ||   ||||||||||||||||    
T  16984237 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgatagttaactgccgagga 16984158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 520 - 645
Target Start/End: Complemental strand, 41795437 - 41795307
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| ||||   |||||||||||||||||||||||||| || || ||   |||||||||||||||||||||||  |||| |    
T  41795437 ttcttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggaaaacctcgttagttaactgccgaggatcttctgcactacaa 41795338  T
Q  616 aatctggcagaagct-ctctcatccattatt 645  Q
    |||||||||||| || |||||||||||||||    
T  41795337 aatctggcagaatctcctctcatccattatt 41795307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 42885510 - 42885576
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaa--tctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  42885510 agttaactgccgatgatcttctgctacaaaaatctggcagaagctctctcatccattattcatctca 42885576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 7485772 - 7485658
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||||||| | |||||  | ||||||||||| || ||||||||||||||| |||||||| |||||||||||| || ||||| | |    
T  7485772 ggctatgccacacgagtaatttacccaaatgcccctcggcagttaactgtcgaagttttagaaatacggctgcaattaactgccgaggaagacttcggca 7485673  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  7485672 gtaaactaccgagga 7485658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 18884580 - 18884501
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  18884580 tcggcagttaactgccgaaattttgaaaaaccggctgcagttaactgccgagaaaaacttcggcagttaactgccgagga 18884501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 40833686 - 40833607
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |||||||    
T  40833686 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaactaccgagga 40833607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 489 - 584
Target Start/End: Complemental strand, 51037579 - 51037484
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    |||| |||||||||||||| |||   |||||| | ||||||||||| |||||||||||||||||| |||||||| |||||||||||| || |||||    
T  51037579 ggctgtgccacacgagtaaattactcaaatgtccctcggcagttaactgccgaagttttagaaatacggctgcaattaactgccgaggaaaacttc 51037484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 583 - 649
Target Start/End: Complemental strand, 243362 - 243296
Alignment:
Q  583 tcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatc 649  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  243362 tcagcagttaactgtcgaggatcttctgttacaaatctggcagaagctctctcactcattattcatc 243296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 601
Target Start/End: Original strand, 38368193 - 38368302
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||| |||||||   |||  || |||||||||||||||||||||| || ||||| | |    
T  38368193 ggctatgccacacgagtaatttatccaaatgtccttcggcagttaactgccgaa---ttatgaaaccggctgcagttaactgccgaggaaaacttcggta 38368289  T
Q  589 gttaactgccgag 601  Q
    || |||| |||||    
T  38368290 gtaaactaccgag 38368302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 584
Target Start/End: Complemental strand, 38369260 - 38369198
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||    
T  38369260 cttcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttc 38369198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 463 - 584
Target Start/End: Complemental strand, 16473817 - 16473696
Alignment:
Q  463 agaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgca 562  Q
    ||||||| ||||  |||||| ||||||| | ||||||||||||| ||||   |||||  ||||||||||||| |||||||||||||| || ||||| |||    
T  16473817 agaattgctgtttacacattacataaggttgtgccacacgagtactttacgaaaatgcccttcggcagttaactgccgaagttttagtaaaccggcggca 16473718  T
Q  563 gttaactgccgagaaatacttc 584  Q
    ||||||| ||||| || |||||    
T  16473717 gttaactaccgaggaaaacttc 16473696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 498 - 603
Target Start/End: Original strand, 48806456 - 48806561
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||||||||| ||||    |||||||||||| || |||| ||||| | | |||||||||||||||||||||| || | ||||| ||||||||||    
T  48806456 acacgagtaatttatccaaatacctttcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgccgaggaaaatttcagcagttaactgc 48806555  T
Q  598 cgagga 603  Q
    ||||||    
T  48806556 cgagga 48806561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 462 - 603
Target Start/End: Original strand, 51492006 - 51492147
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||| |||||| ||||||| | |||||||||||||| | |  |   || |  |||||| |||| || |||||||||||||||||||||||    
T  51492006 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgacgtttttgcttctcggcaattaactgtcgaagttttagaaatccggctgc 51492105  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| || || || || | ||||||||||||||||    
T  51492106 agttaactgcctaggaaaacctcggtagttaactgccgagga 51492147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 524 - 600
Target Start/End: Complemental strand, 39590644 - 39590568
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||||| || || || | |||||||||||||    
T  39590644 tcggcagttaactgccgaagttttagaaatacagctgcagttaactgccgaggaaaacctcggtagttaactgccga 39590568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 603
Target Start/End: Original strand, 50446996 - 50447084
Alignment:
Q  515 aaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||| |||||||||||||| ||||||||||||| |||| |||||||||||||||| |||| || ||||| | ||| |||| |||||||    
T  50446996 aaatgctcttcggcagttaactgccgaagttttaaaaatacggctgcagttaactgtcgaggaaaacttcggcagtaaactaccgagga 50447084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 14200558 - 14200637
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| || ||||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |||||||    
T  14200558 tcggcagttaactgtcgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaactaccgagga 14200637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 15995719 - 15995798
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||||||| |  || ||||||||||||||||||||||||||| || || || | ||||||||||||||||    
T  15995719 tcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 15995798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 19069184 - 19069263
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||||||| |  || ||||||||||||||||||||||||||| || || || | ||||||||||||||||    
T  19069184 tcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 19069263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 46254524 - 46254445
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |||||||    
T  46254524 tcggtagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaactaccgagga 46254445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 23220640 - 23220754
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||| |||   ||||   ||| ||||||||| |||||||||||||||||| ||||||||||||||||||||  || ||||| | |    
T  23220640 ggctgtgccacacgagtaaattactcaaataccctttggcagttaactgccgaagttttagaaatacggctgcagttaactgccgatgaaaacttcggca 23220739  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  23220740 gtaaactaccgagga 23220754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 497 - 575
Target Start/End: Complemental strand, 40061264 - 40061186
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||| |||||||  | |||||||||||  |||||||||||||||| |||| ||||||||||| |||||    
T  40061264 cacacgagtaatttacctaaatgcccatcggcagttaaccgccgaagttttagaaaaccggttgcagttaactaccgag 40061186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 502 - 600
Target Start/End: Complemental strand, 44680172 - 44680074
Alignment:
Q  502 gagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    |||||||||| |||||||| ||||| ||||||| |||||||||||||| || ||||| |||||||||| ||||| | | | || | |||||||||||||    
T  44680172 gagtaatttacctaaatgtccttcgacagttaactgccgaagttttagtaaaccggcggcagttaactaccgaggatttcctcggcagttaactgccga 44680074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 589 - 638
Target Start/End: Complemental strand, 4786345 - 4786296
Alignment:
Q  589 gttaactgccgaggatcttctgctacaaatctggcagaagctctctcatc 638  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  4786345 gttaactgccgatgatcttctgctacaaatctggtagaagctctctcatc 4786296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 575
Target Start/End: Complemental strand, 8111517 - 8111440
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||||||||||| | ||||||||||| || ||||||||  | || |||||||||||||||| |||||    
T  8111517 acacgagtaatttatctaaatgtccatcggcagttaattgtcgaagtttgtggaaaccggctgcagttaactaccgag 8111440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 603
Target Start/End: Complemental strand, 43176730 - 43176625
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||||||| ||||||   ||||| ||||||| ||||||| ||||| | | || ||||||||||||||||||| || ||||| | |||||||| |    
T  43176730 acacgagtaatttacctaaatacccttcgacagttaactgccgaaattttaaagaacctgctgcagttaactgccgaggaaaacttcggcagttaactac 43176631  T
Q  598 cgagga 603  Q
    ||||||    
T  43176630 cgagga 43176625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 598
Target Start/End: Original strand, 49889617 - 49889753
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgt-tcttcggcagttaaatgccgaagttttagaaatccggctg 560  Q
    ||||||||  |||| |||||||||||||| | || || |||||||||| || |   ||| || ||||||||||| || |||||||||||||||| || ||    
T  49889617 gagaattgtcgttcccacattgcataaggttgtggcatacgagtaattgatatttttgtctcctcggcagttaactgtcgaagttttagaaatctggttg 49889716  T
Q  561 cagttaactgccgagaaatacttcaggagttaactgcc 598  Q
    ||||||||||||||| || || || |||||||||||||    
T  49889717 cagttaactgccgaggaaaac-tcgggagttaactgcc 49889753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 524 - 604
Target Start/End: Original strand, 9889991 - 9890071
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggat 604  Q
    ||||||||||| |||||| |  || ||||||||||||||||||||||||||| || || || | |||||||||||||||||    
T  9889991 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggat 9890071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 23221778 - 23221667
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||||||||  |||||  ||||||||||||| |||||||   |||  || |||||||||||||||||||||| || ||||| | |    
T  23221778 ggctatgccacacgagtaatttattcaaatgcccttcggcagttaactgccgaa---ttatgaaaccggctgcagttaactgccgaggaaaacttcggta 23221682  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  23221681 gtaaactaccgagga 23221667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 524 - 600
Target Start/End: Complemental strand, 28084066 - 28083990
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||||||||||| | | | || | |||||||||||||    
T  28084066 tcggcagataactgccgaagttttagaaatccagctgcagttaactgccgaggatttcatcggtagttaactgccga 28083990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 498 - 598
Target Start/End: Complemental strand, 37856846 - 37856746
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||||||| |||||| | ||| ||||||||| ||||||| ||||| | | |||||||||||||  ||||||| || ||||||| |||||| |||    
T  37856846 acacgagtaatttacctaaatatcctttggcagttaactgccgaaattttaaagaaccggctgcagttaggtgccgaggaaaacttcagtagttaattgc 37856747  T
Q  598 c 598  Q
    |    
T  37856746 c 37856746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 484 - 603
Target Start/End: Original strand, 39773360 - 39773480
Alignment:
Q  484 cataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatact 582  Q
    |||| |||| |||||||||||||| |||   |||||| |||||| ||| || |||||||||||| || || ||||| |||||||||||||||| || ||     
T  39773360 catatggctgtgccacacgagtaagttacggaaatgtccttcggtagtaaactgccgaagtttttaggaaaccggcagcagttaactgccgaggaaaacc 39773459  T
Q  583 tcaggagttaactgccgagga 603  Q
    || | ||||||||||||||||    
T  39773460 tcggtagttaactgccgagga 39773480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 497 - 569
Target Start/End: Original strand, 50020087 - 50020159
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaact 569  Q
    |||||||||||||||||||||||  ||| || |||||| |||||||||||||||||  ||| |||||||||||    
T  50020087 cacacgagtaatttatctaaatgccctttggtagttaactgccgaagttttagaaaatcggttgcagttaact 50020159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 603
Target Start/End: Original strand, 12375938 - 12376061
Alignment:
Q  477 cacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgaga 576  Q
    |||||||||||| ||| || |||||||||||||| || |||||| | ||||||||||| ||||||| || | |||  |||||||||||||||| |||||     
T  12375938 cacattgcataaagctgtgtcacacgagtaatttttcaaaatgtacctcggcagttaactgccgaa-ttatggaa--ccggctgcagttaactaccgagg 12376034  T
Q  577 aatacttcaggagttaactgccgagga 603  Q
    || ||||| | ||| |||| |||||||    
T  12376035 aaaacttcggcagtaaactaccgagga 12376061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 550 - 601
Target Start/End: Complemental strand, 48256618 - 48256567
Alignment:
Q  550 aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  48256618 aaatccggctgcagttaactgccgaggaaaacttcagtagttaactgccgag 48256567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 498 - 603
Target Start/End: Complemental strand, 36480639 - 36480537
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||| ||||||||||| |||||||| ||||||||||| ||||||| || | |||  |||||||||||||||| ||||| || ||||| | |||||||| |    
T  36480639 acacaagtaatttatccaaatgttcctcggcagttaactgccgaa-ttatggaa--ccggctgcagttaactaccgaggaaaacttcggtagttaactac 36480543  T
Q  598 cgagga 603  Q
    ||||||    
T  36480542 cgagga 36480537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 50023650 - 50023580
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaa 567  Q
    ||||| |||||||||||||||||  | ||||||||||| |||| ||||||||||||  |||||||||||||    
T  50023650 cacacaagtaatttatctaaatgcccctcggcagttaactgccaaagttttagaaaatcggctgcagttaa 50023580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 567
Target Start/End: Complemental strand, 50030768 - 50030698
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaa 567  Q
    ||||| |||||||||||||||||  | ||||||||||| |||| ||||||||||||  |||||||||||||    
T  50030768 cacacaagtaatttatctaaatgcccctcggcagttaactgccaaagttttagaaaatcggctgcagttaa 50030698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 575
Target Start/End: Original strand, 44674163 - 44674212
Alignment:
Q  526 ggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  44674163 ggcagttaactgccgaagtttaagaaacccggctgcagttaactgccgag 44674212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 584
Target Start/End: Original strand, 55587320 - 55587412
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    |||| |||||||||||||||||| | |||||  ||||||||||||| |||||||   |||  || |||||||||||||||||||||| || |||||    
T  55587320 ggctatgccacacgagtaatttacccaaatgcccttcggcagttaactgccgaa---ttatgaaaccggctgcagttaactgccgaggaaaacttc 55587412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 584
Target Start/End: Complemental strand, 55588395 - 55588303
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    |||| |||||||||||||||||| | |||||  ||||||||||||| |||||||   |||  || |||||||||||||||||||||| || |||||    
T  55588395 ggctatgccacacgagtaatttacccaaatgcccttcggcagttaactgccgaa---ttatgaaaccggctgcagttaactgccgaggaaaacttc 55588303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 462 - 583
Target Start/End: Original strand, 7484665 - 7484782
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||||||||| ||||||   |  |||| |||||||||||||||||||| |||||  | ||||||||||| |||||||   |||  || ||||||||    
T  7484665 gagaattgatgttcccacatttggtttggctatgccacacgagtaatttatccaaatgcccctcggcagttaactgccgaa---ttatgaaaccggctgc 7484761  T
Q  562 agttaactgccgagaaatactt 583  Q
    || |||||||||||||| ||||    
T  7484762 ag-taactgccgagaaaaactt 7484782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 21015736 - 21015815
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| || ||||||||||||||| ||| ||||||||||||| |||  | || || | ||||||||||||||||    
T  21015736 tcggcagttaactgtcgaagttttagaaatacgggtgcagttaactgctgagggaaacctcggtagttaactgccgagga 21015815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 494 - 601
Target Start/End: Original strand, 28234383 - 28234490
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaa 593  Q
    ||||||||||||| ||||   |||||  ||||| ||||||| || ||||||||||| || ||||| |||||||| ||||||| || || || | ||||||    
T  28234383 tgccacacgagtactttacaaaaatgcccttcgacagttaattgtcgaagttttagtaaaccggcggcagttaaatgccgaggaaaacctcggtagttaa 28234482  T
Q  594 ctgccgag 601  Q
    ||||||||    
T  28234483 ctgccgag 28234490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 520 - 575
Target Start/End: Complemental strand, 40354656 - 40354601
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||| ||||||| ||||  |||||||||||||||||| |||||||    
T  40354656 ttcttcggcagttaactgccgaaattttgaaaatccggctgcagttaattgccgag 40354601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 49169209 - 49169094
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| ||||||||||||||  ||   |||||| |||||||||||   | |||||||||| || || ||||| |||||||||||||||| ||||| || |     
T  49169209 ggctgtgccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggaaaccggcggcagttaactgccgaggaatacctcggt 49169110  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  49169109 agttaactgccgagga 49169094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 50274757 - 50274808
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||| |||||| |  ||||||||||||||||||||||||||||||    
T  50274757 tcggcagttaactgccgaggaattagaaatccggctgcagttaactgccgag 50274808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 54634127 - 54634012
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| |||   |||||  |||||| ||| || |||||||||||| || || ||||| |||||||||||||||| || || || |     
T  54634127 ggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggt 54634028  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  54634027 agttaactgccgagga 54634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 494 - 575
Target Start/End: Original strand, 31242182 - 31242264
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaag-ttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||||||||| |||   |||||  ||||||||||||| |||||||| |||||| || ||||| ||||||||||||||||    
T  31242182 tgccacacgagtaaattactcaaatgcccttcggcagttaactgccgaagtttttagtaaaccggcggcagttaactgccgag 31242264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 603
Target Start/End: Complemental strand, 37563395 - 37563277
Alignment:
Q  486 taaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttc 584  Q
    ||||||| |||||||||||||| |||   |||||  |||||| ||| || || ||||||||| || || ||||| |||||||||||||||| || || ||    
T  37563395 taaggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgtcgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctc 37563296  T
Q  585 aggagttaactgccgagga 603  Q
     | ||||||||||||||||    
T  37563295 ggtagttaactgccgagga 37563277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 462 - 575
Target Start/End: Original strand, 46165680 - 46165790
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  ||||||| |||||||| || ||||| ||||||||| | |||||| ||||||||||||| || |||| || | |||  ||||||||    
T  46165680 gagaattgttgttgacacattgtataaggctgtgtcacactagtaatttaccgaaatgtccttcggcagttaactgtcgaa-ttatggaa--ccggctgc 46165776  T
Q  562 agttaactgccgag 575  Q
    |||||||| |||||    
T  46165777 agttaactaccgag 46165790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 575
Target Start/End: Original strand, 3403842 - 3403895
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||| |||||| |  || |||||||||||||||||||||||||||    
T  3403842 cttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgag 3403895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 497 - 574
Target Start/End: Complemental strand, 51494952 - 51494875
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccga 574  Q
    ||||||| ||||||| |||||||  ||||||||||||| ||| |||||||||| || | ||| |||| ||||||||||    
T  51494952 cacacgaataatttacctaaatgcccttcggcagttaactgcagaagttttagtaaactggcggcagctaactgccga 51494875  T

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Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 609 - 645
Target Start/End: Original strand, 11287557 - 11287593
Alignment:
Q  609 tgctacaaatctggcagaagctctctcatccattatt 645  Q
    |||||||||| ||||||||||||||||||||||||||    
T  11287557 tgctacaaatgtggcagaagctctctcatccattatt 11287593  T

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Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 578
Target Start/End: Original strand, 44794994 - 44795110
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  ||| || ||| ||||| ||| ||||||||| ||||   |||||   |||||||||||| |||||||||||||| || | ||| ||    
T  44794994 gagaattgctgtttacactttacatgaggctgtgctacacgagtactttacgaaaatgccattcggcagttaactgccgaagttttagtaaactggcggc 44795093  T
Q  562 agttaactgccgagaaa 578  Q
    ||| |||||||||||||    
T  44795094 agtaaactgccgagaaa 44795110  T

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Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 15999875 - 15999796
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| ||||||    || |||||||||||||| |||||||||||| || || || | ||||||||||||||||    
T  15999875 tcggcagttaactgccgagaaatttgaaatccggctgcaattaactgccgaggaaaacctcggtagttaactgccgagga 15999796  T

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Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 597
Target Start/End: Original strand, 20208481 - 20208580
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||| |||   |||||| | ||||||||||| |||||||||||   | | |||||||||||||||||||||| || || || | ||||||||||    
T  20208481 acacgagtaaattactcaaatgtccctcggcagttaactgccgaagtttactagaaccggctgcagttaactgccgaggaaaacctcggtagttaactgc 20208580  T

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Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 575
Target Start/End: Complemental strand, 26792356 - 26792269
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaag-ttttagaaatccggctgcagttaactgccgag 575  Q
    |||| |||||||||||||| |||   |||||  |||||||| |||| |||||||| |||||| || ||||| ||||||||||||||||    
T  26792356 ggctgtgccacacgagtaaattactcaaatgcccttcggcaattaactgccgaagtttttagtaaaccggcggcagttaactgccgag 26792269  T

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Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 603
Target Start/End: Original strand, 26932553 - 26932660
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaact 595  Q
    ||||||||||| |||   |||||| |||||| ||| || |||||||||||| ||| | ||||| | |||||||||||||| || || || | ||||||||    
T  26932553 cacacgagtaaattactcaaatgtccttcggtagtaaactgccgaagtttttagacaaccggcggtagttaactgccgaggaaaacctcggtagttaact 26932652  T
Q  596 gccgagga 603  Q
    ||||||||    
T  26932653 gccgagga 26932660  T

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Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 552
Target Start/End: Original strand, 40061071 - 40061126
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaa 552  Q
    ||||||||||||||| |||||||  | ||||||||||| || ||||||||||||||    
T  40061071 cacacgagtaatttacctaaatgcccctcggcagttaactgtcgaagttttagaaa 40061126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 597
Target Start/End: Complemental strand, 48807488 - 48807389
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||| |||   |||||| | ||||||||||| || |||| ||||| | | |||||||||||||||||| ||| || ||||| | ||||||||||    
T  48807488 acacgagtaaattactcaaatgtccctcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgctgaggaaaacttcggcagttaactgc 48807389  T

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Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 601
Target Start/End: Original strand, 17342170 - 17342216
Alignment:
Q  555 cggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    ||||||||||||||| |||||||| ||||| | ||||||||||||||    
T  17342170 cggctgcagttaactaccgagaaaaacttcggtagttaactgccgag 17342216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 534
Target Start/End: Complemental strand, 19682211 - 19682177
Alignment:
Q  500 acgagtaatttatctaaatgttcttcggcagttaa 534  Q
    ||||||||||||||||||| |||||||||||||||    
T  19682211 acgagtaatttatctaaatattcttcggcagttaa 19682177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 30726848 - 30726738
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagtta 592  Q
    ||||||||||||||  ||   |||||| |||||| ||| || ||||||| |||| || || ||||| |||||||||||||||| || || || | |||||    
T  30726848 tgccacacgagtaaaatacggaaatgtccttcggtagtaaactgccgaaatttttaggaaaccggcagcagttaactgccgaggaaaacctcggtagtta 30726749  T
Q  593 actgccgagga 603  Q
    |||||||||||    
T  30726748 actgccgagga 30726738  T

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Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 34503739 - 34503785
Alignment:
Q  557 gctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||| |||||||| ||||| | ||||||||||||||||    
T  34503739 gctgcagttaactaccgagaaaaacttcggtagttaactgccgagga 34503785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 478 - 568
Target Start/End: Original strand, 34528115 - 34528205
Alignment:
Q  478 acattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaac 568  Q
    ||||| ||||||||| ||| ||||||||| ||||   |||||  ||||| ||||||| || ||||||||||| || ||||| |||||||||    
T  34528115 acattacataaggctgtgctacacgagtactttacgaaaatgcccttcgacagttaactgtcgaagttttagtaaaccggcggcagttaac 34528205  T

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Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 600
Target Start/End: Original strand, 955820 - 955865
Alignment:
Q  555 cggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    |||||||||||||||||||||||| || || | |||||||||||||    
T  955820 cggctgcagttaactgccgagaaaaacctcggtagttaactgccga 955865  T

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Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 519
Target Start/End: Original strand, 28320493 - 28320550
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatg 519  Q
    |||||||| ||||  |||||||||||||| | || ||||||||||||||||| |||||    
T  28320493 gagaattgttgttgacacattgcataaggttgtgtcacacgagtaatttatcgaaatg 28320550  T

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Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 547 - 603
Target Start/End: Complemental strand, 33051706 - 33051649
Alignment:
Q  547 tagaaatccggctgcagttaactgccg-agaaatacttcaggagttaactgccgagga 603  Q
    |||||| |||||||||||||||||||| ||||| ||||| | | ||||||||||||||    
T  33051706 tagaaaaccggctgcagttaactgccgaagaaaaacttcggcaattaactgccgagga 33051649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 37855846 - 37855907
Alignment:
Q  514 taaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||| ||| ||||||||||| | ||||| ||||| | | ||||||||||||||||||||||    
T  37855846 taaatattcatcggcagttaacttccgaaattttaaagaaccggctgcagttaactgccgag 37855907  T

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Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 588 - 617
Target Start/End: Original strand, 37865203 - 37865232
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaa 617  Q
    ||||||||||||||||||||||||||||||    
T  37865203 agttaactgccgaggatcttctgctacaaa 37865232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 574
Target Start/End: Complemental strand, 50197013 - 50196936
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccga 574  Q
    ||||||| ||||||| |||||||  | ||||||||||| | |||||||||||||||   | |||||||||||| ||||    
T  50197013 cacacgaataatttacctaaatgcccctcggcagttaactaccgaagttttagaaaattgactgcagttaactaccga 50196936  T

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Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 575
Target Start/End: Complemental strand, 50278852 - 50278823
Alignment:
Q  546 ttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||||||||||||||||||    
T  50278852 ttagaaatccggctgcagttaactgccgag 50278823  T

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Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 575
Target Start/End: Original strand, 51036474 - 51036551
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||| ||||||||| | |||||  | ||| ||||||  || ||||||||||||||| |||||| ||||||||||||||    
T  51036474 acactagtaatttacccaaatgcccctcgacagttagctgtcgaagttttagaaatacggctgtagttaactgccgag 51036551  T

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Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 600
Target Start/End: Original strand, 51426565 - 51426610
Alignment:
Q  555 cggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    ||||||||||||| |||||||||| || |||| |||||||||||||    
T  51426565 cggctgcagttaattgccgagaaaaacctcagtagttaactgccga 51426610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 524 - 580
Target Start/End: Original strand, 4768675 - 4768731
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaata 580  Q
    ||||||||||| |||||| |  ||  ||||| |||||||||||||||||||||||||    
T  4768675 tcggcagttaactgccgaggaattcaaaatctggctgcagttaactgccgagaaata 4768731  T

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Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 497 - 569
Target Start/End: Complemental strand, 9013972 - 9013900
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaact 569  Q
    ||||||||||||||| ||||||   ||||||||||||| ||||||| |||  |  | ||||||||||||||||    
T  9013972 cacacgagtaatttacctaaattcccttcggcagttaactgccgaattttgtggcaaccggctgcagttaact 9013900  T

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Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 14201638 - 14201527
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||| |||   |||||  | ||||||||||| |||||||   |||  || |||||||||||||||||||||| || ||||| | |    
T  14201638 ggctatgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaa---ttatgaaaccggctgcagttaactgccgaggaaaacttcggca 14201542  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  14201541 gtaaactaccgagga 14201527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 602
Target Start/End: Complemental strand, 55407843 - 55407791
Alignment:
Q  550 aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagg 602  Q
    |||||||||||||||||||||||||| || |  || | |||||||||||||||    
T  55407843 aaatccggctgcagttaactgccgaggaaaatctcggtagttaactgccgagg 55407791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 78)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 66 - 307
Target Start/End: Complemental strand, 29275298 - 29275057
Alignment:
Q  66 aaaagatgtaagaggagtatgaatattagaaattggaaccaagaaaatatatcaatgttgataaaacctgtcacctagcactatggtttctaggcatctg 165  Q
    |||||||||||||||||| |||||||| |||||||||||||| |||| ||||| |||||||| |||||||||||||||||||||||||||||| || |||    
T  29275298 aaaagatgtaagaggagtgtgaatatttgaaattggaaccaaaaaaaaatatctatgttgatgaaacctgtcacctagcactatggtttctagtcacctg 29275199  T
Q  166 aattgaatatagatgatgaaatgttccctgccactatatgacaacacataagtttgagtcttgcagcttaattcctattgtgtgtaacagttttgaacca 265  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29275198 aattgaatatagatgatgaaatgttccttgccactaaatgacaacatataagtttgagtcttgcagcttaattcctattgtgtgtaacagttttgagcca 29275099  T
Q  266 gactaccatagcccgcatacagttccacaccatttcaggatc 307  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  29275098 gactaccatagcccacatacagttccacaccatttcaggatc 29275057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 550 - 650
Target Start/End: Complemental strand, 41500284 - 41500184
Alignment:
Q  550 aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatc 649  Q
    ||||||||||||||||||||||||||||| || || | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41500284 aaatccggctgcagttaactgccgagaaaaacctcggtagttaactgccgaggatcttctgctacaaatctggcataagctctctcatccattattcatc 41500185  T
Q  650 t 650  Q
    |    
T  41500184 t 41500184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 557 - 652
Target Start/End: Original strand, 24512197 - 24512292
Alignment:
Q  557 gctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||| |||||| ||| || || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24512197 gctgcagttaattgccgaaaaaaacctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 24512292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 603
Target Start/End: Complemental strand, 7190089 - 7189948
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||||||||| |||||| ||||||| | |||||||||||||| |||  |   ||  | ||||||||||| ||||||||||||||||||||||||||    
T  7190089 gagaattgatgttcccacattacataaggttgtgccacacgagtaaattacgtttttgcccctcggcagttaactgccgaagttttagaaatccggctgc 7189990  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||| || ||||| | ||||||||||||||||    
T  7189989 agttaactgccgaggaaaacttcggtagttaactgccgagga 7189948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 462 - 603
Target Start/End: Complemental strand, 3943330 - 3943189
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||| ||||||  |||||||| |||||||||||||| | |  |   || || ||||||||||| ||||||||||||||||||||||||||    
T  3943330 gagaattgttgttcccacattagataaggctatgccacacgagtaaatgacgtttttgctcctcggcagttaactgccgaagttttagaaatccggctgc 3943231  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||||||| || || | ||||||||||||||||    
T  3943230 agttaactgccgagaaaaacctcggtagttaactgccgagga 3943189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 2920528 - 2920464
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2920528 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 2920464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 520 - 652
Target Start/End: Original strand, 34638134 - 34638262
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatc 619  Q
    ||||||||||||||| |||||| |  |||||||| ||| | ||||||||||||||| || ||||| | |||||| || ||||||||||||||||||||||    
T  34638134 ttcttcggcagttaactgccgaggaattagaaattcggtt-cagttaactgccgaggaaaacttcggtagttaattgtcgaggatcttctgctacaaatc 34638232  T
Q  620 tggcagaagctctctcatccattattcatctca 652  Q
    |   |||||||||||||||||||||||||||||    
T  34638233 t---agaagctctctcatccattattcatctca 34638262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 536 - 652
Target Start/End: Original strand, 39393046 - 39393162
Alignment:
Q  536 tgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctc 635  Q
    |||||| || |||||||| ||| || ||||||||| ||||||| || || | ||||||||| |||||||||||| |||||||||||  ||||||||||||    
T  39393046 tgccgaggtattagaaattcggatgtagttaactgtcgagaaaaacctcggtagttaactgtcgaggatcttctactacaaatctgatagaagctctctc 39393145  T
Q  636 atccattattcatctca 652  Q
    |||||||||||||||||    
T  39393146 atccattattcatctca 39393162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 461 - 600
Target Start/End: Original strand, 28419341 - 28419480
Alignment:
Q  461 ggagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctg 560  Q
    ||||||||| ||||  ||||||  |||||||| ||||||||||||| |||| |||||||  ||||||||||||| |||||||||||||| || ||||| |    
T  28419341 ggagaattgctgtttacacatttgataaggctgtgccacacgagtattttacctaaatgcccttcggcagttaactgccgaagttttagtaaaccggcgg 28419440  T
Q  561 cagttaactgccgagaaatacttcaggagttaactgccga 600  Q
     |||||||| ||||| || ||||| | |||||||||||||    
T  28419441 tagttaactaccgaggaaaacttcggcagttaactgccga 28419480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 589 - 652
Target Start/End: Complemental strand, 40679608 - 40679545
Alignment:
Q  589 gttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  40679608 gttaactgccgaggatcttctgctacaaatctggaagaacctctctcatccattattcatctca 40679545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 522 - 650
Target Start/End: Original strand, 17424126 - 17424259
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaa-tccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-aaa 617  Q
    ||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||| || || || | |||||||||||||||||||||||  |||| |||    
T  17424126 cttcggcagttaactgccgaaattttggaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaaaa 17424225  T
Q  618 tctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||| || |||||||| |||||| ||||    
T  17424226 tctggcagaatctcctctcatcgattattgatct 17424259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 554 - 652
Target Start/End: Original strand, 43491136 - 43491234
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||| ||||||| |||| || || |  | |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  43491136 ccggctgcaattaactgtcgaggaaaaccttggtagttaactgccgagaatcttctgttataaatctggcagaagctctctcatccattattcatctca 43491234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 554 - 646
Target Start/End: Complemental strand, 10365838 - 10365746
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattc 646  Q
    ||||||| |||||||||||||| || || |  | |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  10365838 ccggctgtagttaactgccgaggaaaaccttggtagttaaatgccgaggatcttttgctacaaatctggcataagctctctcatccattattc 10365746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 558 - 652
Target Start/End: Complemental strand, 29093870 - 29093779
Alignment:
Q  558 ctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||| ||||||| || || |  | |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  29093870 ctgcagttaattgccgaggaaaaccttggcagttaactgccgaggatcttctgctacaaatctggcagaagctctctca---attattcatctca 29093779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 489 - 584
Target Start/End: Complemental strand, 30803129 - 30803034
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    |||| |||||||||||||| |||   |||||| | ||||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||    
T  30803129 ggctgtgccacacgagtaaattactcaaatgtccctcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttc 30803034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 562 - 652
Target Start/End: Original strand, 2648152 - 2648242
Alignment:
Q  562 agttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||| || |  || | |||||| |||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  2648152 agttaactgccgaggaaaatctcggtagttaattgccgatgatcttctgctacaaatctggcagaaactctctcatcaattattcatctca 2648242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 461 - 603
Target Start/End: Complemental strand, 23347467 - 23347325
Alignment:
Q  461 ggagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctg 560  Q
    ||||||||| ||||  ||||||  |||||||| |||||||||||||| | |  |   ||  ||||||||||||| |||||||||||||||||||||||||    
T  23347467 ggagaattgctgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttgcccttcggcagttaactgccgaagttttagaaatccggctg 23347368  T
Q  561 cagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||| ||||| || || || | || |||||||||||||    
T  23347367 cagttaactaccgaggaaaacctcggtagctaactgccgagga 23347325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 462 - 584
Target Start/End: Complemental strand, 41273386 - 41273264
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  |||||| |||| |||| ||||||||||||| |||||  |||||  ||||||||||||| |||||||||||||| ||  |||| ||    
T  41273386 gagaattgttgtttacacattacatatggctgtgccacacgagtactttatgaaaatgcccttcggcagttaactgccgaagttttagtaaatcggcggc 41273287  T
Q  562 agttaactgccgagaaatacttc 584  Q
    |||||||||||||| || |||||    
T  41273286 agttaactgccgaggaaaacttc 41273264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 462 - 575
Target Start/End: Complemental strand, 20951184 - 20951071
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||| |||||   |||||||| |||||||| ||||| ||| |||||||  ||||||||||||| |||||| |  || |||||||||||||    
T  20951184 gagaattgctgttcccacatgtgataaggctgtgccacaccagtaaattacctaaatgcccttcggcagttaactgccgaggaatttgaaatccggctgc 20951085  T
Q  562 agttaactgccgag 575  Q
    ||||||||||||||    
T  20951084 agttaactgccgag 20951071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 522 - 603
Target Start/End: Original strand, 23346775 - 23346856
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||| || || || || | ||||||||||||||||    
T  23346775 cttcggcagttaactgccgaagttttataaatccggctgcagttaactgccaaggaaaacctcggtagttaactgccgagga 23346856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 494 - 574
Target Start/End: Original strand, 3086003 - 3086083
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccga 574  Q
    |||||||||||||| |||   |||||||| ||||||||||| |||||||||||||||||| |||||| |||||||||||||    
T  3086003 tgccacacgagtaaattactcaaatgttcctcggcagttaactgccgaagttttagaaatacggctgtagttaactgccga 3086083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 650
Target Start/End: Complemental strand, 3937933 - 3937798
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| ||||   ||||||||||||||||||||||||||  | || || | |||||||||||||||| ||||||  |||| |    
T  3937933 ttcttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggtaaacctcggaagttaactgccgaggaacttctgcactacaa 3937834  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  3937833 aatctggcagaatctcctctcatccattattgatct 3937798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 650
Target Start/End: Original strand, 43982191 - 43982326
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| | ||||| ||||   |||||||||||||||||||||||||| || || || | |||||||||||||||| ||||||  |||| |    
T  43982191 ttcttcggcagttaactaccgaaattttctcaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaacttctgcactacaa 43982290  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  43982291 aatctggcagaatctcctctcatccattattgatct 43982326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 498 - 603
Target Start/End: Complemental strand, 10425921 - 10425816
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||| ||||||||| | ||||| || |||| |||||| || ||||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |    
T  10425921 acaccagtaatttacccaaatgctcctcggtagttaactgtcgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaactac 10425822  T
Q  598 cgagga 603  Q
    ||||||    
T  10425821 cgagga 10425816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 524 - 584
Target Start/End: Complemental strand, 36510932 - 36510872
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||    
T  36510932 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttc 36510872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 589 - 652
Target Start/End: Original strand, 26858175 - 26858238
Alignment:
Q  589 gttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||||||||||| || |||||  ||||||||| |||||||||||||    
T  26858175 gttaactgccgaggatcttctgctacaaatgtgacagaaattctctcatcaattattcatctca 26858238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 528 - 603
Target Start/End: Complemental strand, 28477139 - 28477064
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| || || || | ||||||||||| ||||    
T  28477139 cagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacctcggtagttaactgccaagga 28477064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 497 - 600
Target Start/End: Complemental strand, 29401708 - 29401605
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactg 596  Q
    |||||||||||||||  ||||||  | ||||||||||| || |||||||||||||| ||||| |||||||||| ||||||| | | || | |||||||||    
T  29401708 cacacgagtaatttacttaaatgcccctcggcagttaactgtcgaagttttagaaaaccggcggcagttaactcccgagaatttcctcggcagttaactg 29401609  T
Q  597 ccga 600  Q
    ||||    
T  29401608 ccga 29401605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 10424801 - 10424915
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||| |||   |||||  | || |||||||| |||||||||||||||||| ||||| ||||||||||||||| || ||||| | |    
T  10424801 ggctgtgccacacgagtaaattactcaaatgcccctcagcagttaactgccgaagttttagaaatacggctacagttaactgccgaggaaaacttcggca 10424900  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  10424901 gtaaactaccgagga 10424915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 575
Target Start/End: Original strand, 7184990 - 7185103
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  |||||| ||||||||| ||||| ||||||| |||||  |||||  ||||||||||||| ||||||| |||||| || |||||  |    
T  7184990 gagaattgctgtttacacattacataaggctgtgccaaacgagtactttatgaaaatgcccttcggcagttaactgccgaatttttagtaaaccggcgac 7185089  T
Q  562 agttaactgccgag 575  Q
    ||| ||||||||||    
T  7185090 agtaaactgccgag 7185103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 603
Target Start/End: Original strand, 33222587 - 33222692
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||| |||   ||||| || ||||||||||| | ||||| ||||| | | |||||||||||||||||||||| || ||||| | ||||||||||    
T  33222587 acacgagtaaattactcaaatgctcctcggcagttaactaccgaaattttaaagaaccggctgcagttaactgccgaggaaaacttcggcagttaactgc 33222686  T
Q  598 cgagga 603  Q
    ||||||    
T  33222687 cgagga 33222692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 575
Target Start/End: Original strand, 43976823 - 43976900
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||||||| | ||||||| || ||||||||||| ||||||| ||||| ||| ||||||| ||||||||||||||    
T  43976823 acacgagtaattaacctaaatgctcctcggcagttaactgccgaaattttaaaaaaccggctgtagttaactgccgag 43976900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 600 - 652
Target Start/End: Original strand, 16580559 - 16580611
Alignment:
Q  600 aggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  16580559 aggattttctgctacaaatctggcaaaagttctctcatccattattcatctca 16580611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 497 - 569
Target Start/End: Original strand, 36652876 - 36652948
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaact 569  Q
    |||||||||||||||  ||||||| | ||||||||||| || |||||||||||||| |||| |||||||||||    
T  36652876 cacacgagtaatttacttaaatgtccatcggcagttaactgtcgaagttttagaaaaccggatgcagttaact 36652948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 515 - 603
Target Start/End: Complemental strand, 43258818 - 43258730
Alignment:
Q  515 aaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| ||||||||||||| ||||||||||| | ||| |||||||||||||||| ||||  || ||||  | ||||||||||||||||    
T  43258818 aaatgtccttcggcagttaactgccgaagtttgaaaaaaccggctgcagttaactaccgaagaaaactttggtagttaactgccgagga 43258730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 524 - 584
Target Start/End: Complemental strand, 43870197 - 43870137
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| |||||||| || |||||    
T  43870197 tcggcagttaactgccgaagttttagaaatccgactgcagttagctgccgaggaaaacttc 43870137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 29947764 - 29947843
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||| || ||| || ||||| | |||||||| |||||||    
T  29947764 tcggcagttaactgccgaagttttagaaatacggctggagttaaccgctgaggaaaacttcggcagttaactaccgagga 29947843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 494 - 572
Target Start/End: Complemental strand, 29074109 - 29074031
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgcc 572  Q
    |||||||||||||| |||   |||||  | ||||||||||| |||||||||||||||||||| || |||||||||||||    
T  29074109 tgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatccagcggcagttaactgcc 29074031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 522 - 600
Target Start/End: Original strand, 29406967 - 29407045
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    ||||||||||||| ||||||| ||||| | | ||||||||| |||||||||||| || ||||| | |||||||||||||    
T  29406967 cttcggcagttaactgccgaaattttaaagaaccggctgcaattaactgccgaggaaaacttcggcagttaactgccga 29407045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 546 - 603
Target Start/End: Original strand, 29397929 - 29397986
Alignment:
Q  546 ttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||||||||||||||| || || || ||||||||||||||||||    
T  29397929 ttagaaatccgactgcagttaactgccgaggaaaacctcgggagttaactgccgagga 29397986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 542
Target Start/End: Original strand, 2528607 - 2528687
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    |||||||| ||||| |||||||||||||||| || ||||| ||||||||| |  ||||  ||||||||||||| |||||||    
T  2528607 gagaattgctgttcacacattgcataaggctgtgtcacactagtaatttaccgcaatgcccttcggcagttaactgccgaa 2528687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 601
Target Start/End: Original strand, 39489145 - 39489257
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||| |||   ||||   ||||||||||||| ||||||||||||| |||| || ||||||||||||| |||| || ||||| | |    
T  39489145 ggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttacaaatacgactgcagttaactgtcgaggaaaacttcggca 39489244  T
Q  589 gttaactgccgag 601  Q
    || |||| |||||    
T  39489245 gtaaactaccgag 39489257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 20937859 - 20937974
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaag-ttttagaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| ||| |||||||  ||||||||||||| |||||||| |||||| || ||||| |||| | ||| ||||| | | | || |     
T  20937859 ggctgtgccacacgagtaaattacctaaatgcccttcggcagttaactgccgaagtttttagtaaaccggcggcagcttactaccgaggatttcctcggc 20937958  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  20937959 agttaactgccgagga 20937974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 22003513 - 22003398
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| |||   |||||  |||||| ||| || |||||||||||| || || ||||| |||||||||||||||| || || || |     
T  22003513 ggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggt 22003414  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  22003413 agttaactgccgagga 22003398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 27276450 - 27276371
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| ||| || |  || ||||||||||||||||||||||||||| || || || |||||||| |||||||||    
T  27276450 tcggcagttaactgctgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaattgccgagga 27276371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 489 - 575
Target Start/End: Complemental strand, 43619254 - 43619167
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaag-ttttagaaatccggctgcagttaactgccgag 575  Q
    |||| |||||||||||||| |||   |||||  ||||||||||||| |||||||| |||||| || ||||| ||||||||||||||||    
T  43619254 ggctgtgccacacgagtaaattaatcaaatgcccttcggcagttaactgccgaagtttttagtaaaccggcggcagttaactgccgag 43619167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 497 - 575
Target Start/End: Original strand, 6637504 - 6637582
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||| ||||| || | |||| |||||| |||||||||||  | || |||||||||||||||| |||||    
T  6637504 cacacgagtaatttacctaaacgtccctcggtagttaactgccgaagtttgtggaaaccggctgcagttaactaccgag 6637582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 498 - 552
Target Start/End: Complemental strand, 29601247 - 29601193
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaa 552  Q
    |||||||||||||||| |||| | ||||||||||||| ||| |||||||||||||    
T  29601247 acacgagtaatttatccaaatatccttcggcagttaactgctgaagttttagaaa 29601193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 601
Target Start/End: Original strand, 10825215 - 10825292
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    |||| |||||| | |||||||||||||||||||||||||  |||||| |||| || || || | ||||||||||||||    
T  10825215 tcggtagttaactaccgaagttttagaaatccggctgcacctaactgtcgaggaaaacctcggcagttaactgccgag 10825292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 603
Target Start/End: Original strand, 16544342 - 16544447
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    ||||||||||||||||||||| | ||||| ||||||| ||||||| ||||| | | |||| |||| ||||||  ||||  | ||||| | || |||||||    
T  16544342 acacgagtaatttatctaaatatccttcgacagttaattgccgaaattttaaagaaccggttgcacttaactctcgagggaaacttcggcagctaactgc 16544441  T
Q  598 cgagga 603  Q
    ||||||    
T  16544442 cgagga 16544447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 603
Target Start/End: Original strand, 39947594 - 39947675
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| ||| || || ||||||||||| || ||||| |||||||||||||||| || ||||| | |||||||||| |||||    
T  39947594 cttcggtagtaaactgtcgaagttttagtaaaccggcggcagttaactgccgaggaaaacttcggtagttaactgcagagga 39947675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 603
Target Start/End: Original strand, 41004555 - 41004604
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||||||||||| ||| ||||| | ||||||||||||||||    
T  41004555 ccggctgcagttaactgccgaaaaaaacttcggtagttaactgccgagga 41004604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 24607641 - 24607593
Alignment:
Q  527 gcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||| |||||||| |||| ||| ||||||||||||||||||||||    
T  24607641 gcagttaactgccgaagatttaaaaaaccggctgcagttaactgccgag 24607593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 515 - 603
Target Start/End: Complemental strand, 29407972 - 29407884
Alignment:
Q  515 aaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| | ||||||||||| || |||| ||||| | | ||||||||||||||||  |||| || ||||| | ||||||||||||||||    
T  29407972 aaatgtccctcggcagttaactgtcgaaattttaaagaaccggctgcagttaactaacgaggaaaacttcggcagttaactgccgagga 29407884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 601
Target Start/End: Complemental strand, 34639453 - 34639313
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttct-tcggcagttaaatgccgaagttttagaaatccggctg 560  Q
    |||||||||||||| ||||||  |||||||| |||||||| |||||||||  |   ||  |  ||||||| ||| ||||||    ||| |||||||||||    
T  34639453 gagaattgatgttcccacatttgataaggctgtgccacactagtaatttacttttttgccccctcggcaggtaactgccgagaaattaaaaatccggctg 34639354  T
Q  561 cagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    ||||||||||| ||| || || || ||||||||||||||||    
T  34639353 cagttaactgctgaggaaaacatcgggagttaactgccgag 34639313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 515 - 575
Target Start/End: Original strand, 43257738 - 43257798
Alignment:
Q  515 aaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||| ||||||||||||| || |||||||| | ||| ||||| ||||||||||||||||    
T  43257738 aaatgtccttcggcagttaactgtcgaagtttgaaaaaaccggcagcagttaactgccgag 43257798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 3795334 - 3795413
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| || ||| |  || ||||||||||||||||||||||||||| || || |  | ||||||||||||||||    
T  3795334 tcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaaccttggaagttaactgccgagga 3795413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 3803619 - 3803568
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||| |||||| |  || |||||||||||||||||||||||||||    
T  3803619 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgag 3803568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 17420529 - 17420644
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| ||||||||||||||  || | |||||  |||||||||||   | |||||||||| || || ||||| |||||||||||||||||||  | || |     
T  17420529 ggctgtgccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggcggcagttaactgccgagaaaatcctcggt 17420628  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  17420629 agttaactgccgagga 17420644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 603
Target Start/End: Complemental strand, 17426441 - 17426362
Alignment:
Q  525 cggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||| |||||||||||| || |  ||||| |||||||| ||||||| || || |||| ||||||||||||||||    
T  17426441 cggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcagtagttaactgccgagga 17426362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 650
Target Start/End: Original strand, 28472148 - 28472214
Alignment:
Q  588 agttaactgccgaggatcttctg--ctac-aaatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||| ||||||||||||  |||| ||||||||||||| || ||||||||||||||||||||    
T  28472148 agttaactgctgaggatcttctgcactacaaaatctggcagaatctcctctcatccattattcatct 28472214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 38945759 - 38945810
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||| |||||| |  || |||||||||||||||||||||||||||    
T  38945759 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgag 38945810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 603
Target Start/End: Original strand, 40156400 - 40156475
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||| ||||||| ||||  ||| ||||||||||||||||| |||| || |||||   ||||||||||||||||    
T  40156400 cagttaattgccgaaattttgaaaaaccggctgcagttaactgacgaggaaaacttcgacagttaactgccgagga 40156475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 574
Target Start/End: Complemental strand, 15488281 - 15488172
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  |||||||||||||| | || ||||  ||||||||||| |||||| | ||| ||||||| || ||||   ||| ||| ||||||||    
T  15488281 gagaattgttgttgacacattgcataaggttgtgtcacattagtaatttatcgaaatgtccctcgacagttaattgtcgaa---ttataaaaccggctgc 15488185  T
Q  562 agttaactgccga 574  Q
    |||||||| ||||    
T  15488184 agttaactaccga 15488172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 603
Target Start/End: Original strand, 28138582 - 28138656
Alignment:
Q  529 agttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| ||||||| ||||| | | |||| |||| |||||||||||| || ||||| | ||||||||||||||||    
T  28138582 agttaactgccgaaattttaaagaaccggttgcaattaactgccgaggaaaacttcggcagttaactgccgagga 28138656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 575
Target Start/End: Complemental strand, 39211697 - 39211587
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||||||||  ||| |||||||||||| || ||||  ||||||||||| |||||  |||| |||||||| || |||| || | |||  ||||||||    
T  39211697 gagaattgatgttgacacgttgcataaggctgtgtcacattagtaatttatcgaaatgcccttcagcagttaactgtcgaa-ttatggaa--ccggctgc 39211601  T
Q  562 agttaactgccgag 575  Q
    |||||||| |||||    
T  39211600 agttaactaccgag 39211587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 547
Target Start/End: Original strand, 39793924 - 39793982
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt 547  Q
    |||| ||||||||||||||  |||| |||||  ||||||||||||| ||||||||||||    
T  39793924 ggctgtgccacacgagtaaaatatcaaaatgcccttcggcagttaactgccgaagtttt 39793982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 547
Target Start/End: Complemental strand, 39800764 - 39800706
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt 547  Q
    |||| ||||||||||||||  |||| |||||  ||||||||||||| ||||||||||||    
T  39800764 ggctgtgccacacgagtaaaatatcaaaatgcccttcggcagttaactgccgaagtttt 39800706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 575
Target Start/End: Original strand, 14002490 - 14002567
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||||| |||   |||||| | ||||||||||| ||| ||| ||||| | | ||||||||||||||||||||||    
T  14002490 acacgagtaaattactcaaatgtccctcggcagttaactgctgaaattttaaagaaccggctgcagttaactgccgag 14002567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 603
Target Start/End: Complemental strand, 25184876 - 25184827
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||||||||||| || || || | ||||||||||||||||    
T  25184876 ccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 25184827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 542
Target Start/End: Complemental strand, 33002409 - 33002364
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    ||||||||||||||||| |||||| |||||| |||||| |||||||    
T  33002409 cacacgagtaatttatcgaaatgtccttcggtagttaactgccgaa 33002364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 43870260 - 43870215
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaa 507  Q
    |||||||||||||| |||||| ||||||| | ||||||||||||||    
T  43870260 gagaattgatgttcccacattacataaggttgtgccacacgagtaa 43870215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 213529 - 213449
Alignment:
Q  524 tcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| ||||| || || ||||| |||||||||| ||||| ||| | || | ||||||||||||||||    
T  213529 tcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaattcctcggtagttaactgccgagga 213449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 515 - 575
Target Start/End: Complemental strand, 12252567 - 12252507
Alignment:
Q  515 aaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||| ||||||||||||| || |||| ||||| | | |||||||||||||||| |||||    
T  12252567 aaatgtccttcggcagttaactgtcgaaattttaaagaaccggctgcagttaacttccgag 12252507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 18003349 - 18003269
Alignment:
Q  524 tcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| ||||| || || ||||| |||||||||| ||||| ||| | || | ||||||||||||||||    
T  18003349 tcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaattcctcggtagttaactgccgagga 18003269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 520 - 571
Target Start/End: Original strand, 28472105 - 28472157
Alignment:
Q  520 ttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgc 571  Q
    |||||||| |||||| ||||||| |||| | ||||||||||||||||||||||    
T  28472105 ttcttcggtagttaactgccgaaattttgaaaaatccggctgcagttaactgc 28472157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 463 - 511
Target Start/End: Complemental strand, 29093971 - 29093923
Alignment:
Q  463 agaattgatgttctcacattgcataaggctttgccacacgagtaattta 511  Q
    ||||||| ||||| |||||| ||||||||| || |||||||||||||||    
T  29093971 agaattgttgttcccacattacataaggctgtggcacacgagtaattta 29093923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 39490074 - 39489963
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| ||||||||| |||| ||||  |||||| | ||||||||||| ||| |||   |||  || |||||||||||||||||||||| || ||||| | |    
T  39490074 ggctatgccacacgggtaaattattcaaatgtccctcggcagttaactgctgaa---ttatgaaaccggctgcagttaactgccgaggaaaacttcggca 39489978  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  39489977 gtaaactaccgagga 39489963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 8e-97; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 66 - 307
Target Start/End: Complemental strand, 3822727 - 3822484
Alignment:
Q  66 aaaagatgtaagaggagtatgaatattagaaattggaaccaagaaaatatatcaatgttgataaaacctgtcacctagcactatggtttctaggcatctg 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||    
T  3822727 aaaagatgtaagaggagtatgaatattagaaattggaaccaagaaaatatatcaatgttgatgaaacctgtcacctagcactatagtttctaggcacctg 3822628  T
Q  166 aattgaatatagatgatgaaatgttccctgccactatatgacaacacataagtttgagtcttgcagcttaatt-cctattgtgtgtaacagttttgaacc 264  Q
    ||||||||||||||||| | |||||||||||||||| |||||| || ||||||||||||| |||||||||||| |||||||||||||| |||||||| ||    
T  3822627 aattgaatatagatgataatatgttccctgccactaaatgacagcatataagtttgagtcatgcagcttaattccctattgtgtgtaatagttttgagcc 3822528  T
Q  265 agactaccatagcccgcatacag-ttccacaccatttcaggatc 307  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  3822527 agactaccatagcccacatacagtttccacaccatttcaggatc 3822484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 497 - 652
Target Start/End: Complemental strand, 542894 - 542738
Alignment:
Q  497 cacacgagtaatttatctaaatgttct-tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatact-tcaggagttaac 594  Q
    ||||||||||||||| ||||||||||  ||||||||||| || ||| |  |||||||||||||||||| ||||||||||| || ||| || | |||||||    
T  542894 cacacgagtaatttacctaaatgttccatcggcagttaactgtcgaggaattagaaatccggctgcagctaactgccgaggaa-actctcggtagttaac 542796  T
Q  595 tgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  542795 tgccgaggatcttctgctacaaatctggcagaagttctctcatccattattcatctca 542738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 528 - 652
Target Start/End: Original strand, 11346008 - 11346133
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaa 627  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||| || || || | ||||||||| ||||||||||||||||||||||||||||||    
T  11346008 cagttaactgccgaagttttagaaatccagctgcagttaactgccgaggaaaacctcggtagttaactgtcgaggatcttctgctacaaatctggcagaa 11346107  T
Q  628 gct-ctctcatccattattcatctca 652  Q
     || ||||||||||||||||||||||    
T  11346108 tctcctctcatccattattcatctca 11346133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 522 - 652
Target Start/End: Original strand, 18307249 - 18307379
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctg 621  Q
    ||||||||||||| || ||| |  ||| |||  |||||| |||||||||||||| || || || | ||||||||||||||||||||||||||||||||||    
T  18307249 cttcggcagttaactgtcgaggaattaaaaaatcggctgtagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatctg 18307348  T
Q  622 gcagaagctctctcatccattattcatctca 652  Q
    |||||||| ||||||||||||||||||||||    
T  18307349 gcagaagccctctcatccattattcatctca 18307379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 556 - 652
Target Start/End: Original strand, 25497540 - 25497636
Alignment:
Q  556 ggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||| || |  || | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25497540 ggctgcagttaactgccgaggaaaatctcggtagttaactgccgagaatcttctgctacaaatcaggcagaagctctctcatccattattcatctca 25497636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 498 - 652
Target Start/End: Original strand, 35564232 - 35564386
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    ||||||||||||||   |||| ||||||||||||||| ||||||| ||| |   | || ||||||||||| |||||||   | | || | ||||||||||    
T  35564232 acacgagtaatttactcaaatattcttcggcagttaactgccgaattttgaaggaaccagctgcagttaattgccgaggttttcctcggtagttaactgc 35564331  T
Q  598 cgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
     |||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  35564332 tgaggatcttctgctacaaatctggcataagctctctcatccattattcacctca 35564386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 462 - 603
Target Start/End: Complemental strand, 7762382 - 7762241
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||| |||||| ||||||||| |||||||||||||||| |  |   ||  | ||||||||||| |||||||||||||||||| ||| |||    
T  7762382 gagaattgctgttcccacattacataaggctgtgccacacgagtaattgacgtttttgcccctcggcagttaactgccgaagttttagaaattcggttgc 7762283  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||| |||| || || |||||||||||||||||||||    
T  7762282 agttaactgtcgaggaaaacctcaggagttaactgccgagga 7762241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 555 - 638
Target Start/End: Original strand, 20192381 - 20192464
Alignment:
Q  555 cggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatc 638  Q
    ||||||||||||||||||||| || |||||   |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20192381 cggctgcagttaactgccgaggaaaacttcgatagttaaatgccgaggatcttctgctacaaatctggcagaagctctctcatc 20192464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 588 - 650
Target Start/End: Complemental strand, 42865816 - 42865754
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 650  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42865816 agttaattgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 42865754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 520 - 650
Target Start/End: Complemental strand, 19037551 - 19037416
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| ||||   |||||||||||||||||||||||||| || || || | |||||||||||||||||||||||  |||| |    
T  19037551 ttcttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaa 19037452  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  19037451 aatctggcagaatctcctctcatccattattgatct 19037416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 520 - 650
Target Start/End: Original strand, 30708895 - 30709030
Alignment:
Q  520 ttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttct--gctac-a 615  Q
    ||||||||||||||| ||||||| |||| | ||||||||||||||||||||||||||  | || || |||||||||||||||||||||| |  ||||| |    
T  30708895 ttcttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgagggaaacctcgggagttaactgccgaggatcttatgcgctacaa 30708994  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  30708995 aatctggcagaatctcctctcatccattattgatct 30709030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 462 - 600
Target Start/End: Complemental strand, 42913016 - 42912878
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  ||||||  |||||||| ||||||||||||| ||||| ||||||  |||||| |||||| || ||||||||||| || ||||| ||    
T  42913016 gagaattgctgtttacacatttgataaggctgtgccacacgagtattttatttaaatgcccttcggtagttaattgtcgaagttttagtaaaccggcggc 42912917  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccga 600  Q
    |||||||| ||||| || ||||| | |||||||||||||    
T  42912916 agttaactaccgaggaaaacttcggcagttaactgccga 42912878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 462 - 575
Target Start/End: Complemental strand, 14801 - 14688
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  ||||||  |||||| | |||||||||||||| |||   |||||| ||||||||||||| |||||||||||||||||| ||||||     
T  14801 gagaattgctgtttacacatttgataaggttgtgccacacgagtaaattactcaaatgtccttcggcagttaactgccgaagttttagaaatacggctgt 14702  T
Q  562 agttaactgccgag 575  Q
    ||||||||||||||    
T  14701 agttaactgccgag 14688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 520 - 650
Target Start/End: Complemental strand, 8128 - 7994
Alignment:
Q  520 ttcttcggcagttaaatgccgaagt-tttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttct--gctacaa 616  Q
    ||||||||||| ||||||||||| | ||||||||| ||| ||||||||||||||||| || |  || | |||||||| |||||||||| ||  |||||||    
T  8128 ttcttcggcagctaaatgccgaaatatttagaaatacggttgcagttaactgccgaggaaaatctcggtagttaactaccgaggatctcctgcgctacaa 8029  T
Q  617 atctggcagaagct-ctctcatccattattcatct 650  Q
    ||||||||||| || ||| ||||||||||||||||    
T  8028 atctggcagaatctcctcacatccattattcatct 7994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 498 - 575
Target Start/End: Complemental strand, 11348577 - 11348500
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||||| |||   |||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  11348577 acacgagtaaattactcaaatgttcctcggcagttaactgccgaagttttagaaatccggatgcagttaactgccgag 11348500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 557 - 652
Target Start/End: Original strand, 3600367 - 3600462
Alignment:
Q  557 gctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||| || || || ||   ||||||| |||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||    
T  3600367 gctgcagttaactgccaaggaaaacctcgatagttaacagccgaggatcttctgctacaaatctgacagaagttctttcatgcattattcatctca 3600462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 528 - 603
Target Start/End: Original strand, 7757326 - 7757401
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| || || ||   ||||||||||||||||    
T  7757326 cagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgctagttaactgccgagga 7757401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 8539592 - 8539541
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8539592 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgag 8539541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 8537226 - 8537291
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagct-ctctcatccattattcatctca 652  Q
    ||||||||||||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||    
T  8537226 agttaactgccgaggatgttctgctacaaatctgccagaatctcctctcatccattattcatctca 8537291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 3891480 - 3891531
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  3891480 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgag 3891531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 497 - 600
Target Start/End: Complemental strand, 38408570 - 38408467
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactg 596  Q
    ||||||||||||||| |||||||  |||||||| |||| ||||||||||||||||| ||| | |||||||||| ||||| | | | || | |||||||||    
T  38408570 cacacgagtaatttacctaaatgcccttcggcaattaactgccgaagttttagaaaaccgacggcagttaactcccgaggatttcctcggcagttaactg 38408471  T
Q  597 ccga 600  Q
    ||||    
T  38408470 ccga 38408467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 43094648 - 43094601
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43094648 cagttaactgccgaagttttagaaatccggctgcagttaactgccgag 43094601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 497 - 575
Target Start/End: Complemental strand, 5200459 - 5200381
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||| ||||||||| |||||||||| |||| |||||| || ||||||||||||||  ||||||||||||||| |||||    
T  5200459 cacacaagtaatttacctaaatgttcatcggtagttaactgtcgaagttttagaaaatcggctgcagttaactcccgag 5200381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 498 - 600
Target Start/End: Complemental strand, 18512753 - 18512652
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||| ||| ||||||| |||||||||||||| |||||||||||   ||| |||||||||||||||||||||| || |  |||| || |||||||    
T  18512753 acacgagtaaatta-ctaaatgctcttcggcagttaactgccgaagtttagtaaaaccggctgcagttaactgccgaggaaaatctcagcagctaactgc 18512655  T
Q  598 cga 600  Q
    |||    
T  18512654 cga 18512652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 575
Target Start/End: Original strand, 30705071 - 30705185
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaag-ttttagaaatccggctg 560  Q
    |||||||| ||||  |||||| ||||||||| |||||||||||| |||||  ||||||  |||| |||||||| |||||||| |||||| || ||||| |    
T  30705071 gagaattgttgtttacacatttcataaggctgtgccacacgagtcatttacgtaaatgcccttcagcagttaactgccgaagtttttagtaaaccggcgg 30705170  T
Q  561 cagttaactgccgag 575  Q
    ||||||||| |||||    
T  30705171 cagttaactaccgag 30705185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 603
Target Start/End: Original strand, 30192487 - 30192568
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||| ||||||| ||||| | | ||||||||||||||||| |||| || ||||| | ||||||||||||||||    
T  30192487 cttcggcagttaactgccgaaattttaaagaaccggctgcagttaactgtcgaggaaaacttcggcagttaactgccgagga 30192568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 603
Target Start/End: Original strand, 35671053 - 35671158
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||| |||  ||||||||| |||||| |||| || |||| ||||| | | |||||||||||||||||||||| || ||||  | ||||||||||    
T  35671053 acacgagtaaattacttaaatgttcctcggcaattaactgtcgaaattttaaagaaccggctgcagttaactgccgaggaaaactttggcagttaactgc 35671152  T
Q  598 cgagga 603  Q
    ||||||    
T  35671153 cgagga 35671158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 462 - 542
Target Start/End: Complemental strand, 8680381 - 8680301
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    |||||||| ||||  |||||||||||||||| || ||||||||||||||| | |||||  ||||||||||||| |||||||    
T  8680381 gagaattgttgttgacacattgcataaggctgtgtcacacgagtaatttacccaaatgcccttcggcagttaactgccgaa 8680301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 498 - 578
Target Start/End: Original strand, 18512202 - 18512282
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaa 578  Q
    |||||||||| ||||  ||||| || ||||||||||| |||||||||||   ||| |||||||||||||||||||||||||    
T  18512202 acacgagtaaattattcaaatgctcatcggcagttaactgccgaagtttagtaaaaccggctgcagttaactgccgagaaa 18512282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 13837685 - 13837800
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| ||||||||||||| ||||   |||||  |||||||||| || |||||||||||| || || ||||| |||||||||||||||| || || || |     
T  13837685 ggctgtgccacacgagtactttacaaaaatgcccttcggcagtaaactgccgaagtttttagtaaaccggcggcagttaactgccgaggaaaacctcggt 13837784  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  13837785 agttaactgccgagga 13837800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 524 - 598
Target Start/End: Original strand, 5773 - 5847
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgcc 598  Q
    ||||||||||| |||||||||||||||||| || |||||||||| ||||||| || || || | |||||||||||    
T  5773 tcggcagttaactgccgaagttttagaaatacgactgcagttaattgccgaggaaaacctcggtagttaactgcc 5847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 524 - 644
Target Start/End: Original strand, 28880318 - 28880443
Alignment:
Q  524 tcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-aaatc 619  Q
    ||||||||||| ||||||| |||| | ||||||||||||||  |||||||||| || || || | | |||||||||||||||||| ||  |||| |||||    
T  28880318 tcggcagttaactgccgaaattttgaaaaatccggctgcagcaaactgccgaggaaaacctcggtaattaactgccgaggatcttatgccctacaaaatc 28880417  T
Q  620 tggcagaagct-ctctcatccattat 644  Q
    |||||||| || ||||||||||||||    
T  28880418 tggcagaatctcctctcatccattat 28880443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 547
Target Start/End: Complemental strand, 27673791 - 27673706
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt 547  Q
    |||||||| ||||  ||||||  |||||||| |||||||||||| |||||  |||||| |||| ||||||||| ||||||||||||    
T  27673791 gagaattgttgtttacacatttgataaggctatgccacacgagtcatttacgtaaatgctctttggcagttaactgccgaagtttt 27673706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 522 - 603
Target Start/End: Original strand, 34122519 - 34122600
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||| |||||| |  || ||||||||||||||||||||||||||| || |  || | ||||||||||||||||    
T  34122519 cttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaagctcggtagttaactgccgagga 34122600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 652
Target Start/End: Complemental strand, 1401428 - 1401388
Alignment:
Q  612 tacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  1401428 tacaaatctagcagaagctctctcatccattattcatctca 1401388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 528 - 572
Target Start/End: Original strand, 43094009 - 43094053
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgcc 572  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||    
T  43094009 cagttaactgccgaaattttagaaatccggctgcagttaactgcc 43094053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 498 - 548
Target Start/End: Original strand, 510993 - 511043
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttta 548  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||||    
T  510993 acacgagtaatttatctaaatgttcttcgatagttaactgccgaattttta 511043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 11699259 - 11699305
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaat 508  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||    
T  11699259 gagaattgatgttctcacattacataaggttgtgccacacgagtaat 11699305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 572
Target Start/End: Complemental strand, 8577025 - 8576972
Alignment:
Q  520 ttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgcc 572  Q
    ||||||||||||||| ||||||| |||| | |||||||||||||||||||||||    
T  8577025 ttcttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgcc 8576972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 603
Target Start/End: Original strand, 25877617 - 25877697
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||| ||||||||||| |  || |||| ||||||||| |||||||||||| || ||||| | ||||||||||||||||    
T  25877617 cttcggcaattaaatgccgaggaattcgaaa-ccggctgcaattaactgccgaggaaaacttcggtagttaactgccgagga 25877697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 497 - 574
Target Start/End: Complemental strand, 38971726 - 38971649
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccga 574  Q
    ||||||| ||||||| |||||||  ||||||||||||| | ||||| |||  | || |||||||||||||||||||||    
T  38971726 cacacgactaatttacctaaatgcccttcggcagttaactcccgaattttgtggaaaccggctgcagttaactgccga 38971649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 601
Target Start/End: Complemental strand, 18538381 - 18538334
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    |||||||||||||||||||||| || ||||| | ||||||||||||||    
T  18538381 ccggctgcagttaactgccgaggaaaacttcggtagttaactgccgag 18538334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 20744069 - 20744018
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||| ||||||||||||| | |  |||||||||||||||||||||    
T  20744069 tcggcagttaactgccgaagttttaaagaatcggctgcagttaactgccgag 20744018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 41798815 - 41798894
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| ||| ||||  || ||||||||||||||||||||||||||  || || || | ||||| ||||||||||    
T  41798815 tcggcagttaactgctgaagaatttgaaatccggctgcagttaactgccgaagaaaacctcggtagttatctgccgagga 41798894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 524 - 574
Target Start/End: Complemental strand, 1397426 - 1397376
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccga 574  Q
    ||||||||||| ||| || |  |||||||||||||||||||||||||||||    
T  1397426 tcggcagttaactgctgaggaattagaaatccggctgcagttaactgccga 1397376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 596
Target Start/End: Complemental strand, 41623126 - 41623052
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactg 596  Q
    ||||||||||||| ||||||| ||||| | | ||||||||||| |||||||||| |  ||||| | |||||||||    
T  41623126 cttcggcagttaactgccgaaattttaaagaaccggctgcagtaaactgccgaggacaacttcggcagttaactg 41623052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 524 - 574
Target Start/End: Original strand, 42937189 - 42937239
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccga 574  Q
    ||||| ||||| ||||||||||| ||||| ||||| |||||||||||||||    
T  42937189 tcggcggttaactgccgaagtttaagaaaaccggcggcagttaactgccga 42937239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 2532640 - 2532595
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaa 507  Q
    |||||||| ||||| |||||| ||||||||| ||||||||||||||    
T  2532640 gagaattgctgttcccacattacataaggctgtgccacacgagtaa 2532595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 588 - 645
Target Start/End: Original strand, 16462035 - 16462092
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattatt 645  Q
    ||||||||||||| |  || ||| |||| ||||||||||| |||||||||||||||||    
T  16462035 agttaactgccgatgcgctcctggtacagatctggcagaaactctctcatccattatt 16462092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 19041229 - 19041114
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttta--gaaatccggctgcagttaactgccgagaaatacttcag 586  Q
    |||| ||||||||||||||  || | ||||||||||||||||||   | |||||||||||  ||||| |||| ||||||| |||||||  || || || |    
T  19041229 ggctgtgccacacgagtaaaataccaaaatgttcttcggcagtttgctaccgaagttttaacgaaat-cggcggcagttagctgccgaagaaaacctcgg 19041131  T
Q  587 gagttaactgccgagga 603  Q
     ||||||||||||||||    
T  19041130 tagttaactgccgagga 19041114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 575
Target Start/End: Complemental strand, 30887414 - 30887385
Alignment:
Q  546 ttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||||||||||||||||||    
T  30887414 ttagaaatccggctgcagttaactgccgag 30887385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 549 - 602
Target Start/End: Complemental strand, 34123986 - 34123933
Alignment:
Q  549 gaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagg 602  Q
    |||||||||||||||||||||||| || || || || | |||||||||||||||    
T  34123986 gaaatccggctgcagttaactgccaaggaaaacctcggtagttaactgccgagg 34123933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 42942525 - 42942476
Alignment:
Q  526 ggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||| ||||||||||||||||| || || ||| ||||||||||||    
T  42942525 ggcagttaactgccgaagttttagaaaaccagcggcaattaactgccgag 42942476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 494 - 584
Target Start/End: Complemental strand, 3892543 - 3892456
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    |||||||||||||| |||   |||||| | ||||||||||| |||||||   |||  || |||||||||||||||||||||| || |||||    
T  3892543 tgccacacgagtaaattactcaaatgtccctcggcagttaactgccgaa---ttatgaaaccggctgcagttaactgccgaggaaaacttc 3892456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 5197014 - 5197058
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccga 541  Q
    |||||||||||||||||||||||  | ||||||||||| ||||||    
T  5197014 cacacgagtaatttatctaaatgcccctcggcagttaactgccga 5197058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 524 - 600
Target Start/End: Complemental strand, 28388595 - 28388519
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    ||||||||||  |||||| |  || ||||||| ||||||||||||||||||| || || || | |||||||||||||    
T  28388595 tcggcagttagctgccgaggaatttgaaatccagctgcagttaactgccgaggaaaacctcggtagttaactgccga 28388519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 38855788 - 38855708
Alignment:
Q  524 tcggcagttaaatgccgaagtttta-gaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| ||||||||||| | | || ||||| |||||||||||||||| || || || | ||||||||||| ||||    
T  38855788 tcggcagttaactgccgaagtttgaaggaaaccggcggcagttaactgccgaggaaaacctcggtagttaactgccaagga 38855708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 602
Target Start/End: Original strand, 38968118 - 38968170
Alignment:
Q  550 aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagg 602  Q
    |||||||||||||||||||||||||| || || ||   |||||||||||||||    
T  38968118 aaatccggctgcagttaactgccgaggaaaacctcgatagttaactgccgagg 38968170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 498 - 542
Target Start/End: Complemental strand, 40788828 - 40788784
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    |||||||||||||||| ||||| || ||||||||||| |||||||    
T  40788828 acacgagtaatttatccaaatgctcctcggcagttaactgccgaa 40788784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 555 - 603
Target Start/End: Complemental strand, 40789252 - 40789204
Alignment:
Q  555 cggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||||||||||| || | || || ||||||||||||||||    
T  40789252 cggctgcagttaactgccgaggaaaattttagcagttaactgccgagga 40789204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 4e-49; HSPs: 106)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 462 - 652
Target Start/End: Complemental strand, 34694573 - 34694382
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttct-tcggcagttaaatgccgaagttttagaaatccggctg 560  Q
    |||||||| ||||| ||||||  |||||| | |  ||||||||||||||| |||||||  |  ||||||||||| || ||| |  |||||||||||||||    
T  34694573 gagaattgttgttcccacatttgataaggttataacacacgagtaatttacctaaatgccccctcggcagttaactgtcgaggaattagaaatccggctg 34694474  T
Q  561 cagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||| ||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34694473 cagtaaactgccgagaaaaacctcgggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 34694382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 524 - 652
Target Start/End: Original strand, 55385134 - 55385262
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggc 623  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| || || || | ||||||||| ||||||||||||||||||||||||||    
T  55385134 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgtcgaggatcttctgctacaaatctggc 55385233  T
Q  624 agaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||| ||||||    
T  55385234 agaagctctctcatccattattaatctca 55385262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 524 - 652
Target Start/End: Original strand, 43476188 - 43476317
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaa-tccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctgg 622  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||||||||| || || || | |||||||||||||||||||| |||||||||||||     
T  43476188 tcggaagttaactgccgaagttttagaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttttgctacaaatctga 43476287  T
Q  623 cagaagctctctcatccattattcatctca 652  Q
    ||||||||||||||||||||||||||||||    
T  43476288 cagaagctctctcatccattattcatctca 43476317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 522 - 652
Target Start/End: Complemental strand, 2271391 - 2271260
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctg 621  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||  |  | || ||||||||||||||||||||||||||||||||||||    
T  2271391 cttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgccgagggaatcctcgggagttaactgccgaggatcttctgctacaaatctg 2271292  T
Q  622 gcagaagct-ctctcatccattattcatctca 652  Q
    |||||| || ||||||||||| ||||||||||    
T  2271291 gcagaatctcctctcatccataattcatctca 2271260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 522 - 652
Target Start/End: Complemental strand, 4004881 - 4004750
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctg 621  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||| || || || | | |||||||||||||||||||||||||||| |||    
T  4004881 cttcggtagttaattgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcggtacttaactgccgaggatcttctgctacaaacctg 4004782  T
Q  622 gcagaagct-ctctcatccattattcatctca 652  Q
    |||||| || ||||||||||||||||||||||    
T  4004781 gcagaatctcctctcatccattattcatctca 4004750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 522 - 652
Target Start/End: Original strand, 36134318 - 36134449
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctg 621  Q
    |||||| |||||| | ||||||||||||||||||| |||||||||||||||||| || || || ||||||||||||||||||||||||||||||||||||    
T  36134318 cttcggaagttaactaccgaagttttagaaatccgtctgcagttaactgccgaggaaaacctcgggagttaactgccgaggatcttctgctacaaatctg 36134417  T
Q  622 gcagaagct-ctctcatccattattcatctca 652  Q
    |||||| || |||| |||||||||||||||||    
T  36134418 gcagaatctcctcttatccattattcatctca 36134449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 524 - 641
Target Start/End: Complemental strand, 24703491 - 24703374
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggc 623  Q
    ||||||||||| | |||||||||||||||| ||| ||||||||||||||||| ||  | |||||||||||||||||| ||||||||||||||||||||||    
T  24703491 tcggcagttaactaccgaagttttagaaattcggatgcagttaactgccgaggaaatcctcaggagttaactgccgatgatcttctgctacaaatctggc 24703392  T
Q  624 agaagctctctcatccat 641  Q
    ||||||||||||||||||    
T  24703391 agaagctctctcatccat 24703374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 524 - 650
Target Start/End: Original strand, 41802995 - 41803121
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggc 623  Q
    ||||||||||| ||||||||  ||  ||| |||||||||||||||||||||| || || || | |||||||||||||||||||| |||||||||||||||    
T  41802995 tcggcagttaactgccgaagaatttaaaaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttttgctacaaatctggc 41803094  T
Q  624 agaagctctctcatccattattcatct 650  Q
    |||||||||||||||||||||||||||    
T  41803095 agaagctctctcatccattattcatct 41803121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 524 - 652
Target Start/End: Complemental strand, 52570642 - 52570514
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggc 623  Q
    ||||||||||| ||||||||  ||  ||| ||| |||||||||||| |||||||| || || | |||||||||||||||||||||| |||||||||||||    
T  52570642 tcggcagttaactgccgaagaattcaaaaaccgactgcagttaactaccgagaaaaacctcggtagttaactgccgaggatcttctactacaaatctggc 52570543  T
Q  624 agaagctctctcatccattattcatctca 652  Q
    |||| ||||||||| ||||||||||||||    
T  52570542 agaaactctctcattcattattcatctca 52570514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 524 - 650
Target Start/End: Complemental strand, 55207739 - 55207613
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggc 623  Q
    ||||||||||| ||||||||  ||  ||| |||| |||||||||||||| || |  || |  | ||||||||||||||||||||||||||||||||||||    
T  55207739 tcggcagttaactgccgaagaattcaaaaaccggttgcagttaactgcctaggacaaccttggtagttaactgccgaggatcttctgctacaaatctggc 55207640  T
Q  624 agaagctctctcatccattattcatct 650  Q
    |||||||||||||||||||||||||||    
T  55207639 agaagctctctcatccattattcatct 55207613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 524 - 652
Target Start/End: Complemental strand, 49219867 - 49219739
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggc 623  Q
    |||| |||||| |||||| |  |||||||||||||||||||||||||||||| || || |  | ||||||||  ||||||||||||||||||||| || |    
T  49219867 tcggtagttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaaaccttggtagttaactatcgaggatcttctgctacaaatttgac 49219768  T
Q  624 agaagctctctcatccattattcatctca 652  Q
    |||||||||| ||||||||||||||||||    
T  49219767 agaagctctcccatccattattcatctca 49219739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 554 - 652
Target Start/End: Complemental strand, 45101894 - 45101796
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||||||||||||   | |||  | ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  45101894 ccggctgcagttaactgccgaggttttctttggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatatattattcatctca 45101796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 559 - 652
Target Start/End: Original strand, 41577107 - 41577200
Alignment:
Q  559 tgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||| ||| ||| ||||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  41577107 tgcagttaactgtcgacaaaaacttcggtagtaaactgccgaggatcttctgctacaaatcttgcagaagctctctcatccattatccatctca 41577200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 462 - 603
Target Start/End: Complemental strand, 42166548 - 42166407
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||||||||  |||||| ||||||| | ||||||||||||| ||||   ||||||  |||||||||||| |||||||||||||| || ||||| ||    
T  42166548 gagaattgatgtttacacattacataaggttgtgccacacgagtactttacaaaaatgtcattcggcagttaactgccgaagttttagtaaaccggcggc 42166449  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||| |||||||||| || ||||| | ||||||||||||||||    
T  42166448 agtaaactgccgaggaaaacttcggtagttaactgccgagga 42166407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 556 - 652
Target Start/End: Complemental strand, 13896920 - 13896824
Alignment:
Q  556 ggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||||| |||| || || || | ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  13896920 ggctgcagttaactgtcgaggaaaacctcggtagttaactgccgaagattttctactacaaatctggcagaagctctctcatccattattcatctca 13896824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 19454363 - 19454299
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19454363 agttaactgccgaggatcttctactacaaatctggcagaagctctctcatccattattcatctca 19454299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 562 - 650
Target Start/End: Complemental strand, 51402436 - 51402348
Alignment:
Q  562 agttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 650  Q
    ||||||||| |||| || || || | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  51402436 agttaactgtcgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatctgtcagaagctctctcatccattattcatct 51402348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 51696586 - 51696522
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  51696586 agttaactgccgaggatcttctgctgcaaatctggcagaagctctctcatccattattcatctca 51696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 462 - 603
Target Start/End: Complemental strand, 43478969 - 43478827
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttct-tcggcagttaaatgccgaagttttagaaatccggctg 560  Q
    |||||||| ||||| |||||| ||||||| | |||||||||||||| | || |   ||| |  ||||||||||| ||| |||||||||||||||||||||    
T  43478969 gagaattgttgttcccacattacataaggttgtgccacacgagtaaatgatgtttttgtcccctcggcagttaactgctgaagttttagaaatccggctg 43478870  T
Q  561 cagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||||| || ||||| | ||||||||||||||||    
T  43478869 cagttaactgccgaggaaaacttcggtagttaactgccgagga 43478827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 520 - 650
Target Start/End: Complemental strand, 2647780 - 2647648
Alignment:
Q  520 ttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctac-aaa 617  Q
    ||||||||||||||| ||||||| |||| | |||||||||||||||||||||||||| || || || | ||||||||||||||||||| || |||| |||    
T  2647780 ttcttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctgct-ctacaaaa 2647682  T
Q  618 tctggcagaagct-ctctcatccattattcatct 650  Q
    ||||||||||  | ||||||||||||||||||||    
T  2647681 tctggcagaatttcctctcatccattattcatct 2647648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 549 - 652
Target Start/End: Original strand, 49609405 - 49609508
Alignment:
Q  549 gaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcat 648  Q
    ||||| |||| |||||||| || ||||||| || || | |||||||||||||||| |||||||||||||||||||| ||||||||| || ||||||||||    
T  49609405 gaaattcggccgcagttaattgtcgagaaaaacctcggtagttaactgccgaggaacttctgctacaaatctggcataagctctcttattcattattcat 49609504  T
Q  649 ctca 652  Q
    ||||    
T  49609505 ctca 49609508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 461 - 603
Target Start/End: Complemental strand, 4015268 - 4015126
Alignment:
Q  461 ggagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctg 560  Q
    ||||||||| ||||  |||||| ||||||||| || |||||||||| ||||   |||||  ||||||||||||| |||||||||||||| || ||||| |    
T  4015268 ggagaattgctgtttacacattacataaggctgtgtcacacgagtactttacgaaaatgcccttcggcagttaactgccgaagttttagtaaaccggcgg 4015169  T
Q  561 cagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
     |||||||||||||| || || || | ||||||||||||||||    
T  4015168 gagttaactgccgaggaaaacctcggaagttaactgccgagga 4015126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 590 - 652
Target Start/End: Original strand, 7245155 - 7245217
Alignment:
Q  590 ttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7245155 ttaactgccgagtatcttctgctacaaatctgacagaagctctctcatccattattcatctca 7245217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 527 - 648
Target Start/End: Original strand, 41137718 - 41137829
Alignment:
Q  527 gcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcaga 626  Q
    |||||||| |||||| |  || ||||||||||||||||||||||||||| || ||          |||| ||||||||||||||||||||||||||||||    
T  41137718 gcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac----------aactaccgaggatcttctgctacaaatctggcaga 41137807  T
Q  627 agctctctcatccattattcat 648  Q
    ||||||||||||||||||||||    
T  41137808 agctctctcatccattattcat 41137829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 500 - 601
Target Start/End: Original strand, 2062359 - 2062460
Alignment:
Q  500 acgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccg 599  Q
    |||||||||||||| ||||   ||||||||||||| ||||||||||||||||| | ||||||||||||||| |||| || ||||| | ||||||||||||    
T  2062359 acgagtaatttatccaaatacccttcggcagttaactgccgaagttttagaaaactggctgcagttaactgtcgaggaaaacttcggcagttaactgccg 2062458  T
Q  600 ag 601  Q
    ||    
T  2062459 ag 2062460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 462 - 603
Target Start/End: Original strand, 8475761 - 8475902
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  || ||| ||||||| | ||||||||||||| ||||   |||||| ||||||||||||| |||||||||||||| || ||||| ||    
T  8475761 gagaattgctgtttacatattacataaggttgtgccacacgagtactttacgaaaatgtccttcggcagttaactgccgaagttttagtaaaccggcggc 8475860  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||| || || || | |||||||||| |||||    
T  8475861 agttaactgccgaggaaaacctcggtagttaactgctgagga 8475902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 43568927 - 43568991
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  43568927 agttaactgctgaggatcttctgttacaaatctgacagaagctctctcatccattattcatctca 43568991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 520 - 650
Target Start/End: Complemental strand, 49140928 - 49140793
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| |||    |||||||||||||||||||||||||| || || |||| |||||||||||||||| ||||||  |||| |    
T  49140928 ttcttcggcagttaattgccgaaatttgctcaaatccggctgcagttaactgccgaggaaaacctcagtagttaactgccgaggaacttctgcactacaa 49140829  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  49140828 aatctggcagaatctcctctcatccattattgatct 49140793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 520 - 650
Target Start/End: Original strand, 54389787 - 54389922
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| ||||   |||||||||||||||||||||||||| || || || | |||||||||||||||| ||||||  |||| |    
T  54389787 ttcttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaacttctgcactacaa 54389886  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  54389887 aatctggcagaatctcctctcatccattattgatct 54389922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 498 - 601
Target Start/End: Complemental strand, 14044000 - 14043897
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||||||| | ||||   ||||||||||||| || ||||||||||||||  ||||||||||||||||||||| || ||||| | ||||||||||    
T  14044000 acacgagtaatttacccaaatacccttcggcagttaactgtcgaagttttagaaaatcggctgcagttaactgccgaggaaaacttcggcagttaactgc 14043901  T
Q  598 cgag 601  Q
    ||||    
T  14043900 cgag 14043897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 462 - 584
Target Start/End: Complemental strand, 4331958 - 4331836
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  |||||| ||||||||| ||||||||||||| ||||   |||| | ||||||||||||| |||||||||||||| || ||||| ||    
T  4331958 gagaattgctgtttacacattacataaggctgtgccacacgagtactttacgaaaatatccttcggcagttaactgccgaagttttagtaaaccggcggc 4331859  T
Q  562 agttaactgccgagaaatacttc 584  Q
    |||||||||| ||| || |||||    
T  4331858 agttaactgctgaggaaaacttc 4331836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 462 - 584
Target Start/End: Original strand, 19988394 - 19988516
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||||||||||   |  |||| |||||||||||||| |||   |||||  | ||||||||||| |||||||||||||||||| |||||||    
T  19988394 gagaattgctgttctcacatttggtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggctgc 19988493  T
Q  562 agttaactgccgagaaatacttc 584  Q
    |||| |||||||||||| |||||    
T  19988494 agttgactgccgagaaaaacttc 19988516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 27739678 - 27739564
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||| |||   ||||   ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| | |    
T  27739678 ggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggca 27739579  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  27739578 gtaaactaccgagga 27739564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 34543247 - 34543133
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| ||||||| |||||| |||   |||||| | ||||||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| | |    
T  34543247 ggctgtgccacatgagtaaattactcaaatgtccctcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggca 34543148  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  34543147 gtaaactaccgagga 34543133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 3493550 - 3493665
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt--agaaatccggctgcagttaactgccgagaaatacttcag 586  Q
    |||| |||||||||||||| |||  ||||||||| ||| ||||||| ||||||||||||  ||||| ||||| |||||||||||| |||||| || || |    
T  3493550 ggctgtgccacacgagtaaattacttaaatgttcctcgacagttaactgccgaagtttttaagaaa-ccggcggcagttaactgcagagaaaaacctcgg 3493648  T
Q  587 gagttaactgccgagga 603  Q
    |||||||||||||||||    
T  3493649 gagttaactgccgagga 3493665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 3497244 - 3497359
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt--agaaatccggctgcagttaactgccgagaaatacttcag 586  Q
    |||| |||||||||||||| |||  ||||||||| ||| ||||||| ||||||||||||  ||||| ||||| |||||||||||| |||||| || || |    
T  3497244 ggctgtgccacacgagtaaattacttaaatgttcctcgacagttaactgccgaagtttttaagaaa-ccggcggcagttaactgcagagaaaaacctcgg 3497342  T
Q  587 gagttaactgccgagga 603  Q
    |||||||||||||||||    
T  3497343 gagttaactgccgagga 3497359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 498 - 603
Target Start/End: Original strand, 7941081 - 7941186
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||||||| ||||||   ||||||||||||| ||||||| ||||| | | |||||||||||||||||| ||| || ||||| | ||||||||||    
T  7941081 acacgagtaatttacctaaatacccttcggcagttaactgccgaaattttaaagaaccggctgcagttaactgctgaggaaaacttcggcagttaactgc 7941180  T
Q  598 cgagga 603  Q
    ||||||    
T  7941181 cgagga 7941186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 650
Target Start/End: Original strand, 34049072 - 34049207
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| |||    |||||||||||||||||||||||||| || || || | |||||||||||||||| ||||||  |||| |    
T  34049072 ttcttcggcagttaactgccgaaatttgctcaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaacttctgcactacaa 34049171  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  34049172 aatctggcagaatctcctctcatccattattgatct 34049207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 16484532 - 16484453
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||  || |||| |||||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  16484532 tcggcagttacctgtcgaaattttagtaatccggctgcagttaactgccgaggaaaacttcgggagttaactgccgagga 16484453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 48246409 - 48246488
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| || || || | ||||||||||||||||    
T  48246409 tcggcagttaactgctgaagttttagaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 48246488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 4008429 - 4008320
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaa 593  Q
    ||||||||||||| ||||   |||||  |||||||||| || ||||||| |||||| || ||||| ||||||||||| ||||||| || || ||||||||    
T  4008429 tgccacacgagtattttacaaaaatgcccttcggcagtaaactgccgaaattttagtaaaccggcggcagttaactgtcgagaaaaacctcgggagttaa 4008330  T
Q  594 ctgccgagga 603  Q
    ||||||||||    
T  4008329 ctgccgagga 4008320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 554 - 652
Target Start/End: Complemental strand, 34648250 - 34648150
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaa--tctggcagaagctctctcatccattattcatctc 651  Q
    |||||||||||||||  ||||| || || || | ||| || ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  34648250 ccggctgcagttaacgaccgaggaaaacctcggcagtaaattgctgaggatcttatgctacaaaattctggcagaagctctctcatccattattcatctc 34648151  T
Q  652 a 652  Q
    |    
T  34648150 a 34648150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 462 - 603
Target Start/End: Original strand, 42165098 - 42165239
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  ||||||  |||||||| ||||||||||||| ||||   |||||  ||||||||||||  ||| |||||||||| || ||||| ||    
T  42165098 gagaattgttgtttacacatttgataaggctgtgccacacgagtattttacgaaaatgcccttcggcagttagctgctgaagttttagtaaaccggcggc 42165197  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| ||||||| || || || | ||||||||||||||||    
T  42165198 agttaattgccgaggaaaacctcggtagttaactgccgagga 42165239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 489 - 574
Target Start/End: Complemental strand, 50998791 - 50998706
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccga 574  Q
    |||| |||||||||||||| |||   |||||  | ||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  50998791 ggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttataaatccggctgcagttaactgccga 50998706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 527 - 603
Target Start/End: Original strand, 12897824 - 12897900
Alignment:
Q  527 gcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |||||||    
T  12897824 gcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaactaccgagga 12897900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 502 - 574
Target Start/End: Original strand, 16611075 - 16611147
Alignment:
Q  502 gagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccga 574  Q
    |||||||||| |||||||  ||||||||||||| | ||||||||||||||| ||||| |||||||||||||||    
T  16611075 gagtaatttacctaaatgcccttcggcagttaactaccgaagttttagaaaaccggcggcagttaactgccga 16611147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 502 - 574
Target Start/End: Complemental strand, 22048178 - 22048106
Alignment:
Q  502 gagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccga 574  Q
    |||||||||| |||||||  ||||||||||||| | ||||||||||||||| ||||| |||||||||||||||    
T  22048178 gagtaatttacctaaatgcccttcggcagttaactaccgaagttttagaaaaccggcggcagttaactgccga 22048106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 500 - 603
Target Start/End: Complemental strand, 45076350 - 45076246
Alignment:
Q  500 acgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag-aaatacttcaggagttaactgcc 598  Q
    |||||||||||| | |||| | ||||||||||||| ||||||| ||||| | | ||||||| |||||||||||||| ||| ||||| | |||||||||||    
T  45076350 acgagtaatttacccaaatatccttcggcagttaactgccgaaattttaaagaaccggctgtagttaactgccgagaaaaaacttcggcagttaactgcc 45076251  T
Q  599 gagga 603  Q
    |||||    
T  45076250 gagga 45076246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 2743395 - 2743474
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| |  || ||||||||||||||||||||||||||| || || || ||||||||||||||||||    
T  2743395 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 2743474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 4002737 - 4002788
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  4002737 tcggcatttaattgccgaagttttagaaatccggctgcagttaactgccgag 4002788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 16647223 - 16647172
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  16647223 tcggcagttaactgccgatgttttagaaatccggctgcagttaactgccgag 16647172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 19341670 - 19341591
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| |  |||||||||||||||||||||||| ||||| || ||||| | ||||||||||||||||    
T  19341670 tcggcagttaactgccgaggaattagaaatccggctgcagttaactaccgaggaaaacttcggcagttaactgccgagga 19341591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 28817077 - 28816998
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |||||||    
T  28817077 tcggcagttaactgccaaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaactaccgagga 28816998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 11249635 - 11249521
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||| |||   ||||   ||||||||||||| ||| ||||||||||||||  |||||||||||||||||||| || ||||| | |    
T  11249635 ggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgctgaagttttagaaatatggctgcagttaactgccgaggaaaacttcggca 11249536  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  11249535 gtaaactaccgagga 11249521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 497 - 575
Target Start/End: Original strand, 17561729 - 17561807
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||| |||||||| | | | ||||||| ||||||| ||||||||| |||||||||||||||| |||||    
T  17561729 cacacgagtaatttacctaaatgtcccttgacagttaactgccgaaattttagaaaaccggctgcagttaactcccgag 17561807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 555 - 649
Target Start/End: Complemental strand, 46347766 - 46347672
Alignment:
Q  555 cggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatc 649  Q
    ||||||||||||||||||||| || || ||   | ||||||| ||| |||||||||||||||||| || |||| |||||||||||||| ||||||    
T  46347766 cggctgcagttaactgccgaggaaaacctcgataattaactgtcgaagatcttctgctacaaatcagggagaaactctctcatccattgttcatc 46347672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 20350594 - 20350667
Alignment:
Q  503 agtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgaga 576  Q
    |||||||||| ||||||||| ||||||||||| || ||||||||||||||   |||||||||||||| ||||||    
T  20350594 agtaatttatttaaatgttcatcggcagttaattgtcgaagttttagaaaattggctgcagttaactaccgaga 20350667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 515 - 603
Target Start/End: Original strand, 6143659 - 6143747
Alignment:
Q  515 aaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| ||||||||||||| ||| ||| ||| | | | |||||||||||||||||||||| || ||||| | ||||||||||||||||    
T  6143659 aaatgtccttcggcagttaattgctgaaatttaaaagaaccggctgcagttaactgccgaggaaaacttcggcagttaactgccgagga 6143747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 603
Target Start/End: Complemental strand, 600616 - 600541
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||| |||||||||||| |||||||||| ||||||||||| |||| || || || | ||||||||||||||||    
T  600616 cagttaactgccgaagttttggaaatccggccgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 600541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 19750039 - 19750090
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  19750039 tcggcagttaactgccgaaattttagaaatacggctgcagttaactgccgag 19750090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 602 - 652
Target Start/End: Original strand, 2426559 - 2426609
Alignment:
Q  602 gatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  2426559 gatcttctgctataaatttggcagaagctctctcattcattattcatctca 2426609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 603
Target Start/End: Complemental strand, 4002556 - 4002502
Alignment:
Q  549 gaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||||||||||||||||| || || || ||||||||||||||||||    
T  4002556 gaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 4002502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 575
Target Start/End: Original strand, 16861099 - 16861177
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||| |||||||  | ||| ||||||| || |||||||||||||| |||| ||||||||||| |||||    
T  16861099 cacacgagtaatttacctaaatgcccctcgacagttaactgtcgaagttttagaaaaccggatgcagttaactaccgag 16861177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 603
Target Start/End: Original strand, 10491962 - 10492103
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||||||||| ||| ||  ||  |||| ||||| | |||||| |||   |||||| | |||| |||||| || ||||||||||||||| |||||||    
T  10491962 gagaattgatgttcccacgtttgatttggctgtgccatatgagtaaattactcaaatgtccatcggtagttaactgtcgaagttttagaaatacggctgc 10492061  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||| |||| || ||||| | ||| |||| |||||||    
T  10492062 agttaactgacgaggaaaacttcggcagtaaactaccgagga 10492103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 603
Target Start/End: Complemental strand, 32593210 - 32593109
Alignment:
Q  502 gagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    |||||||||||| |||| |  |||||||||||| || |||| ||||| | | |||||||||||||||| ||||| || |||||   ||||||||||||||    
T  32593210 gagtaatttatccaaatatctttcggcagttaactgtcgaaattttaaagaaccggctgcagttaacttccgaggaaaacttcgatagttaactgccgag 32593111  T
Q  602 ga 603  Q
    ||    
T  32593110 ga 32593109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 462 - 569
Target Start/End: Complemental strand, 2275054 - 2274947
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  ||||||  |||| ||| || ||||||||||||||| ||||||||  || ||||||||| |||| ||||||||| || ||||| ||    
T  2275054 gagaattgctgtttacacatttgataaagctgtgtcacacgagtaatttacctaaatgtcattgggcagttaactgccaaagttttagtaaaccggcggc 2274955  T
Q  562 agttaact 569  Q
     |||||||    
T  2274954 cgttaact 2274947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 498 - 601
Target Start/End: Complemental strand, 11270386 - 11270283
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||| ||||  ||||||  |||| ||||||| ||||||| ||| | | | ||||||||||||||||||| || || ||||| | ||||||||||    
T  11270386 acacgagtaaattattcaaatgtctttcgacagttaactgccgaaatttaaaagaaccggctgcagttaactgccaaggaaaacttcggcagttaactgc 11270287  T
Q  598 cgag 601  Q
    ||||    
T  11270286 cgag 11270283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 557 - 648
Target Start/End: Original strand, 20366222 - 20366313
Alignment:
Q  557 gctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcat 648  Q
    |||||||||||||||  | ||| || || | |||||| || |||||||||||| ||||||||||  |||||||| |||||| ||||||||||    
T  20366222 gctgcagttaactgctaaaaaaaacctcggtagttaattgtcgaggatcttctactacaaatctaccagaagctttctcattcattattcat 20366313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 575
Target Start/End: Original strand, 34542132 - 34542201
Alignment:
Q  503 agtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||| |||||||||||||||||||||| ||| |||   |||  || ||||||||||||||||||||||    
T  34542132 agtaatttacctaaatgttcttcggcagttaactgctgaa---ttatgaaaccggctgcagttaactgccgag 34542201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 603
Target Start/End: Original strand, 10658798 - 10658899
Alignment:
Q  502 gagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    |||||| ||||  |||||| ||||||| ||||| ||||||| ||| | | | |||||||||| ||||||||||| || ||||  | ||||||||||||||    
T  10658798 gagtaaattatgcaaatgtccttcggctgttaactgccgaaatttaaaagaaccggctgcagctaactgccgaggaaaactttggcagttaactgccgag 10658897  T
Q  602 ga 603  Q
    ||    
T  10658898 ga 10658899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 601
Target Start/End: Complemental strand, 48250945 - 48250868
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    ||||||||||| ||| || |  || ||| ||||||||||||||||||||||| || || || ||||||||||||||||    
T  48250945 tcggcagttaactgctgaggaatttgaattccggctgcagttaactgccgaggaaaacctcgggagttaactgccgag 48250868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 575
Target Start/End: Original strand, 46402374 - 46402430
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||| ||||||| ||||   ||||||||||||||||||||||||||    
T  46402374 ttcttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgag 46402430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 601
Target Start/End: Original strand, 47070402 - 47070542
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttct-tcggcagttaaatgccgaagttttagaaatccggctg 560  Q
    |||||||| ||||| ||||||||||||| || || ||||||||||||| |  |   ||  || |||||| |||| |||| || |||||||||| ||||||    
T  47070402 gagaattgttgttcccacattgcataagactgtggcacacgagtaattgacgtttttgccctatcggcaattaactgccaaatttttagaaattcggctg 47070501  T
Q  561 cagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
     |||||||| ||||| || || || | ||||||||||||||    
T  47070502 tagttaacttccgaggaaaacatccgtagttaactgccgag 47070542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 578
Target Start/End: Complemental strand, 50216928 - 50216876
Alignment:
Q  526 ggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaa 578  Q
    ||||||||| |||||| |  ||| |||||||||||||||||||||||||||||    
T  50216928 ggcagttaactgccgaggaattaaaaatccggctgcagttaactgccgagaaa 50216876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 574
Target Start/End: Original strand, 52387719 - 52387831
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  |||||| ||||||| | ||||||| ||||| ||||   |||||  ||||||||||||| || ||||||||||| || ||||  ||    
T  52387719 gagaattgctgtttgcacattacataaggttgtgccacatgagtattttacgaaaatgcccttcggcagttaactgtcgaagttttagtaaaccggtggc 52387818  T
Q  562 agttaactgccga 574  Q
    |||||||| ||||    
T  52387819 agttaactaccga 52387831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 596781 - 596832
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||| |||| ||||||||||||  |||| |||||||||||||||||||||    
T  596781 tcggcaattaactgccgaagttttgtaaattcggctgcagttaactgccgag 596832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 2267031 - 2267078
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||| || |||||||||||| |||||||||||||||||| |||||    
T  2267031 cagttaattgtcgaagttttagatatccggctgcagttaactaccgag 2267078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 2645417 - 2645532
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaag-ttttagaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||| ||||| |||   |||||| | ||||||||||| |||||||| |||||| || ||||| ||||||||| |||||| || || || |     
T  2645417 ggctatgccacacaagtaaattacacaaatgtccctcggcagttaactgccgaagtttttaggaaaccggcggcagttaacagccgaggaaaacctcggc 2645516  T
Q  588 agttaactgccgagga 603  Q
    |||||||| |||||||    
T  2645517 agttaactaccgagga 2645532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 602
Target Start/End: Original strand, 3948725 - 3948804
Alignment:
Q  524 tcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagg 602  Q
    ||||||||||| |||||| ||||| || || ||||| |||||||||| ||||| ||| | |||| |||||||||||||||    
T  3948725 tcggcagttaactgccgaggtttttaggaaaccggcggcagttaactaccgaggaattcctcagtagttaactgccgagg 3948804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 603
Target Start/End: Complemental strand, 3953271 - 3953212
Alignment:
Q  544 ttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| || ||||| |||||||||||||||| || || || ||||||||||||||||||    
T  3953271 ttttaggaaaccggcggcagttaactgccgaggaaaacctcgggagttaactgccgagga 3953212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 603
Target Start/End: Original strand, 11248492 - 11248630
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||||||||| ||||||   |  |||| ||||| |||||||| ||||  ||||| || ||||||||||| || ||||   |||  || ||||||||    
T  11248492 gagaattgatgttcccacatttggtttggctatgccatacgagtaaattattcaaatgctcctcggcagttaactgtcgaa---ttatgaaaccggctgc 11248588  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||| || ||||| | ||| |||| |||||||    
T  11248589 agttaactgccgaggaaaacttcggcagtaaactaccgagga 11248630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Original strand, 13743290 - 13743341
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||| |||||| |  || |||||||||||||||||||||||||||    
T  13743290 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgag 13743341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 13747794 - 13747716
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| |  || ||||||||||||||||||||||| ||| || || || | ||||||||||||||||    
T  13747794 tcggcagttaactgccgatgaatttgaaatccggctgcagttaactgctgaggaaaacctc-gtagttaactgccgagga 13747716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 614 - 645
Target Start/End: Original strand, 18436766 - 18436797
Alignment:
Q  614 caaatctggcagaagctctctcatccattatt 645  Q
    ||||||||||||||||||||||||||||||||    
T  18436766 caaatctggcagaagctctctcatccattatt 18436797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 34691622 - 34691701
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| |   || ||||||||||||||||||||| |||| || || || | ||||||||||||||||    
T  34691622 tcggcagttaactgccgaggaaataaaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 34691701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 600
Target Start/End: Original strand, 41612338 - 41612441
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactg 596  Q
    |||||||||||||||  |||||||   | ||||||||| || ||||||||||||||  |||| |||||||||| ||||| | | | || | |||||||||    
T  41612338 cacacgagtaatttacataaatgtctattggcagttaactgtcgaagttttagaaaatcggcggcagttaactaccgaggatttcctcggcagttaactg 41612437  T
Q  597 ccga 600  Q
    ||||    
T  41612438 ccga 41612441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 41844476 - 41844361
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| |||   |||||   ||||| ||| || |||||||||||| || || ||||| |||||||||||||||| || || || |     
T  41844476 ggctgtgccacacgagtaagttacggaaatgcctttcggtagtaaattgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggt 41844377  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  41844376 agttaactgccgagga 41844361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 650
Target Start/End: Original strand, 46402417 - 46402483
Alignment:
Q  588 agttaactgccgaggatcttctg--ctac-aaatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||||||||||||||  |||| ||||||||||||| || ||||||||||||||| ||||    
T  46402417 agttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattattgatct 46402483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 575
Target Start/End: Original strand, 49265789 - 49265836
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||| ||||||||||||||||| ||||||| |||||||| |||||    
T  49265789 cagttaattgccgaagttttagaaaaccggctgtagttaacttccgag 49265836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 584
Target Start/End: Original strand, 11094107 - 11094168
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    |||||| |||||  |||||||||||||||||| | ||||||||||||||||||| || |||||    
T  11094107 cttcggtagttatctgccgaagttttagaaatac-gctgcagttaactgccgaggaaaacttc 11094168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 600
Target Start/End: Original strand, 34645533 - 34645635
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||||||| |||||| | ||||||||||||| ||||||  || |  ||| ||| ||||||||||||  |||| || || || | ||||||||||    
T  34645533 acacgagtaatttacctaaatatccttcggcagttaactgccgagtttcttcaaaaccgactgcagttaactctcgaggaaaacctcggcagttaactgc 34645632  T
Q  598 cga 600  Q
    |||    
T  34645633 cga 34645635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 574
Target Start/End: Original strand, 42900138 - 42900224
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccga 574  Q
    |||| ||||||||||||||  || | |||||  ||||||||||||| ||| |||||||| || || ||||| |||||||||||||||    
T  42900138 ggctgtgccacacgagtaaaataccaaaatgcccttcggcagttaactgctgaagttttgagtaaaccggcggcagttaactgccga 42900224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 507
Target Start/End: Original strand, 43476124 - 43476170
Alignment:
Q  461 ggagaattgatgttctcacattgcataaggctttgccacacgagtaa 507  Q
    ||||||||| |||||||||||| ||||||| | ||||||||||||||    
T  43476124 ggagaattgttgttctcacattacataaggttgtgccacacgagtaa 43476170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 603
Target Start/End: Complemental strand, 10492919 - 10492870
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||| |||||||||||| || ||||| | ||||||||||||||||    
T  10492919 ccggctgcaattaactgccgaggaaaacttcggcagttaactgccgagga 10492870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 550
Target Start/End: Complemental strand, 17568063 - 17568010
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttaga 550  Q
    |||||| ||||||||||||||||| | ||||||||||| || |||| |||||||    
T  17568063 cacacgggtaatttatctaaatgtccctcggcagttaactgtcgaaattttaga 17568010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 522 - 599
Target Start/End: Original strand, 19842499 - 19842576
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccg 599  Q
    ||||||||||||| ||||||| ||||| | |  ||||||||||||||||| ||| || |||||   ||||||||||||    
T  19842499 cttcggcagttaactgccgaaattttaaagaatcggctgcagttaactgctgaggaaaacttcgacagttaactgccg 19842576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 612 - 645
Target Start/End: Complemental strand, 20378757 - 20378724
Alignment:
Q  612 tacaaatctggcagaagctctctcatccattatt 645  Q
    |||||||||||||||| |||||||||||||||||    
T  20378757 tacaaatctggcagaaactctctcatccattatt 20378724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 603
Target Start/End: Original strand, 24700692 - 24700797
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||| |||   ||||| || ||||||||||| || ||| |  |||||||||||| ||||||||||| ||||| ||  | || | ||||||||||    
T  24700692 acacgagtaaattactcaaatgctcatcggcagttaactgtcgaggaattagaaatccggttgcagttaactcccgaggaaatcctcggtagttaactgc 24700791  T
Q  598 cgagga 603  Q
    ||||||    
T  24700792 cgagga 24700797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 12898798 - 12898687
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||||||| | |||||  | ||| ||||||| |||||||   |||  || |||||||||||||| ||||||| || ||||| | |    
T  12898798 ggctatgccacacgagtaatttacccaaatgcccctcgacagttaactgccgaa---ttatgaaaccggctgcagttaattgccgaggaaaacttcggta 12898702  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  12898701 gtaaactaccgagga 12898687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 524 - 600
Target Start/End: Original strand, 19440253 - 19440329
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    ||||||||||| ||||||||  ||   || |||||||||||||||||||||| || || || | |||||||||||||    
T  19440253 tcggcagttaactgccgaagaattcataaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccga 19440329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 602
Target Start/End: Complemental strand, 20918061 - 20918009
Alignment:
Q  550 aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagg 602  Q
    |||||||||| ||||||||||||||| || || || | |||||||||||||||    
T  20918061 aaatccggctacagttaactgccgaggaaaacctcggtagttaactgccgagg 20918009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 602
Target Start/End: Complemental strand, 20927023 - 20926971
Alignment:
Q  550 aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagg 602  Q
    |||||||||| ||||||||||||||| || || || | |||||||||||||||    
T  20927023 aaatccggctacagttaactgccgaggaaaacctcggtagttaactgccgagg 20926971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 524 - 576
Target Start/End: Complemental strand, 23443182 - 23443130
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgaga 576  Q
    ||||||||||| |||||| |  || ||| ||||||||||||||||||||||||    
T  23443182 tcggcagttaactgccgaggaatttgaattccggctgcagttaactgccgaga 23443130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 515 - 575
Target Start/End: Original strand, 32743195 - 32743255
Alignment:
Q  515 aaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||| | ||||||||||| ||||||| ||||| | | || |||||||||||||||||||    
T  32743195 aaatgtccatcggcagttaattgccgaaattttaaagaaccagctgcagttaactgccgag 32743255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 515 - 603
Target Start/End: Original strand, 45075334 - 45075422
Alignment:
Q  515 aaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||| || |||| |||||| ||||||| ||||| | |  |||||| |||||||||||||| || ||||  | ||||||||||||||||    
T  45075334 aaatgctcctcggtagttaactgccgaaattttaaagaatcggctggagttaactgccgaggaaaactttggcagttaactgccgagga 45075422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 500 - 544
Target Start/End: Complemental strand, 48566498 - 48566454
Alignment:
Q  500 acgagtaatttatctaaatgttcttcggcagttaaatgccgaagt 544  Q
    ||||||||||||||||| || |||||||||||||| || ||||||    
T  48566498 acgagtaatttatctaagtgctcttcggcagttaactgtcgaagt 48566454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 92; Significance: 3e-44; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 522 - 652
Target Start/End: Complemental strand, 12466 - 12335
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctg 621  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||  || || || | ||||||||||||||||||||||||||||||||||    
T  12466 cttcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgatgaaaacctcggtagttaactgccgaggatcttctgctacaaatctg 12367  T
Q  622 gcagaagct-ctctcatccattattcatctca 652  Q
    |||||| || ||||||||||||||||||||||    
T  12366 gcagaatctactctcatccattattcatctca 12335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 497 - 604
Target Start/End: Original strand, 10622 - 10729
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactg 596  Q
    ||||||||||| |||  ||||||  |||||||| |||| |||||||||||||| || ||||| ||||||||||||||||  | || || | |||||||||    
T  10622 cacacgagtaaattacttaaatgcccttcggcaattaactgccgaagttttagtaaaccggcggcagttaactgccgagggaaacctcggtagttaactg 10721  T
Q  597 ccgaggat 604  Q
    ||||||||    
T  10722 ccgaggat 10729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 86)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 462 - 603
Target Start/End: Complemental strand, 22551003 - 22550862
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  ||||||  |||||||| |||||||||||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  22551003 gagaattgttgtttacacatttgataaggctgtgccacacgagtaatttacctaaatgcccttcggcagttaactgccgaagttttagaaatccggctgc 22550904  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||| || || || | ||||||||||||||||    
T  22550903 agttaactgccgaggaaaacctcggtagttaactgccgagga 22550862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 524 - 650
Target Start/End: Complemental strand, 41858197 - 41858073
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggc 623  Q
    ||||||||||| || |||||  ||  ||| |||||||||||||||||||||| ||  | || ||||||||||| ||||||||||||||||||||||||||    
T  41858197 tcggcagttaactggcgaagaattcaaaaaccggctgcagttaactgccgaggaa--cctcgggagttaactgtcgaggatcttctgctacaaatctggc 41858100  T
Q  624 agaagctctctcatccattattcatct 650  Q
    |||||||||||||||||||||||||||    
T  41858099 agaagctctctcatccattattcatct 41858073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 562 - 652
Target Start/End: Complemental strand, 18441479 - 18441389
Alignment:
Q  562 agttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||||||| || || | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18441479 agttaactgccgagaaaaacctcggcagttaactgccgaggatcttctgctacaaatctggcagaaactctctcatccattattcatctca 18441389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 546 - 648
Target Start/End: Original strand, 26451499 - 26451601
Alignment:
Q  546 ttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattatt 645  Q
    |||||||| |||||| |||||||||||||| || || || | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26451499 ttagaaattcggctgtagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatctattatt 26451598  T
Q  646 cat 648  Q
    |||    
T  26451599 cat 26451601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 524 - 650
Target Start/End: Original strand, 42602457 - 42602583
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggc 623  Q
    ||||||||||| ||||||||  ||  ||| |||| ||||||||||||||||| || || || | ||||||||||||||||||||||| |||||||||| |    
T  42602457 tcggcagttaactgccgaagaattcaaaaaccggatgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgatacaaatctgac 42602556  T
Q  624 agaagctctctcatccattattcatct 650  Q
    | ||| | |||||||||||||||||||    
T  42602557 ataagttgtctcatccattattcatct 42602583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 3395927 - 3395991
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  3395927 agttaactgccgaggatcttctgctacaaatatggcagaaactctctcatccattattcatctca 3395991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 528 - 603
Target Start/End: Original strand, 39601705 - 39601780
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||||||    
T  39601705 cagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 39601780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 494 - 575
Target Start/End: Original strand, 22547436 - 22547517
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||| |||||||||  |||||||  ||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  22547436 tgccacatgagtaatttgcctaaatgcccttcggcagttaactgccgaagttttagaaatccggctgcagttaactaccgag 22547517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 22547504 - 22547568
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  22547504 agttaactaccgaggatcttctactacaaatctggcagaagctctctcatcaattattcatctca 22547568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 41274653 - 41274717
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  41274653 agttaactgccgagaatcttctactataaatctggcagaagctctctcatccattattcatctca 41274717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 462 - 569
Target Start/End: Original strand, 20854552 - 20854659
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||| ||||||  ||||||||  |  |||||||||||||||||| |||| | ||||||||||| ||||||||||||||||| ||||| ||    
T  20854552 gagaattgttgttcacacatttgataaggctgagaaacacgagtaatttatctacatgtccctcggcagttaactgccgaagttttagaaaaccggcggc 20854651  T
Q  562 agttaact 569  Q
    ||||||||    
T  20854652 agttaact 20854659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 461 - 600
Target Start/End: Original strand, 34366845 - 34366984
Alignment:
Q  461 ggagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctg 560  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||||||   | ||   ||  | ||| ||||||| ||||||||||||| |||||||||||    
T  34366845 ggagaattgatgttcccacattacataaggctgtgccacacgagtaaaagacctttttgcccctcgtcagttaactgccgaagttttataaatccggctg 34366944  T
Q  561 cagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    ||||||||| ||||| || || || | |||||||||||||    
T  34366945 cagttaacttccgaggaaaacctcggtagttaactgccga 34366984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 460 - 575
Target Start/End: Original strand, 45409804 - 45409919
Alignment:
Q  460 gggagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggct 559  Q
    |||||||||| ||||  |||||| ||||||||| ||||||||||||| ||||   |||||  ||||||||||||| |||||||||||||| ||  ||||     
T  45409804 gggagaattgctgtttacacattacataaggctgtgccacacgagtactttacgaaaatgcccttcggcagttaactgccgaagttttagtaaatcggcg 45409903  T
Q  560 gcagttaactgccgag 575  Q
    ||||||||||||||||    
T  45409904 gcagttaactgccgag 45409919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 498 - 604
Target Start/End: Original strand, 40740877 - 40740983
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||||||| | |||| | ||||| ||||||| ||||||| ||||| | | |||||||||||||||||||||| || ||||| | ||||||||||    
T  40740877 acacgagtaatttacccaaatatccttcgacagttaactgccgaaattttaaagaaccggctgcagttaactgccgaggaaaacttcggcagttaactgc 40740976  T
Q  598 cgaggat 604  Q
    |||||||    
T  40740977 cgaggat 40740983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 44933826 - 44933935
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaa 593  Q
    |||||||||||||| |||   |||||  | ||||||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| | ||| ||    
T  44933826 tgccacacgagtaaattactcaaatgcccctcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttccgcagtaaa 44933925  T
Q  594 ctgccgagga 603  Q
    || |||||||    
T  44933926 ctaccgagga 44933935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 489 - 584
Target Start/End: Original strand, 28617530 - 28617625
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    |||| |||||||||||||| |||   ||||   ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||    
T  28617530 ggctgtgccacacgagtaaattactcaaatacccttcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttc 28617625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 2335259 - 2335145
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||| |||   |||||  | ||||||||||| | |||||||||||||||| ||||||||||||||||||||| || ||||| | |    
T  2335259 ggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactaccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggta 2335160  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  2335159 gtaaactaccgagga 2335145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 462 - 603
Target Start/End: Complemental strand, 10749812 - 10749671
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  |||||| ||||||| | ||||||||||| | ||||   |||||  ||||||||||||| |||||||||||||| || || || ||    
T  10749812 gagaattgctgtttacacattacataaggttgtgccacacgagaactttacgaaaatgcccttcggcagttaactgccgaagttttagtaaaccagcggc 10749713  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||| || ||||| | ||| |||| |||||||    
T  10749712 agttaactgccgaggaaaacttctgcagtaaactaccgagga 10749671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 514 - 603
Target Start/End: Complemental strand, 36596032 - 36595943
Alignment:
Q  514 taaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||| |||||||||||| || |||| ||||| | | |||||||||||||||||||||| || |||| || ||||||||||||||||    
T  36596032 taaatgtttttcggcagttaattgtcgaaattttaaagaaccggctgcagttaactgccgaggaaaacttaagcagttaactgccgagga 36595943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 462 - 574
Target Start/End: Complemental strand, 34371984 - 34371872
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  ||||||  |||||| | | |||||| |||||||||||||||||  |||| |||||||| |||||||||||||| || ||||| ||    
T  34371984 gagaattgttgtttacacatttgataaggttcttccacacaagtaatttatctaaatgcccttcagcagttaactgccgaagttttagtaaaccggcggc 34371885  T
Q  562 agttaactgccga 574  Q
    ||| |||||||||    
T  34371884 agtaaactgccga 34371872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 528 - 650
Target Start/End: Complemental strand, 15033220 - 15033095
Alignment:
Q  528 cagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctacaaatctggca 624  Q
    ||||||| ||||||| |||| | |||| |||||||| ||||||||||||  | || || | ||||||||||||||||||| |||  ||||||||||||||    
T  15033220 cagttaactgccgaaattttgaaaaattcggctgcaattaactgccgagggaaacctcggtagttaactgccgaggatct-ctgacctacaaatctggca 15033122  T
Q  625 gaagctc-tctcatccattattcatct 650  Q
    ||| ||| |||||||||||||||||||    
T  15033121 gaatctcctctcatccattattcatct 15033095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 27501597 - 27501676
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| | |||||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |||||||    
T  27501597 tcggcagttaactaccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaactaccgagga 27501676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 528 - 603
Target Start/End: Complemental strand, 38604320 - 38604245
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |||||||    
T  38604320 cagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaactaccgagga 38604245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 527 - 601
Target Start/End: Complemental strand, 5533098 - 5533024
Alignment:
Q  527 gcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |||||    
T  5533098 gcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaactaccgag 5533024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 588 - 638
Target Start/End: Original strand, 38871834 - 38871884
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatc 638  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  38871834 agttaactgccaaggatcttctgctacaaatctggcaggagctctctcatc 38871884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 583
Target Start/End: Original strand, 7120871 - 7120956
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatactt 583  Q
    ||||||||||||||||||||| | ||||||||||||| ||| ||| ||| |  || ||||||||||||| ||||||||||| ||||    
T  7120871 acacgagtaatttatctaaatatccttcggcagttaactgctgaattttaaagaaaccggctgcagttagctgccgagaaaaactt 7120956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 603
Target Start/End: Complemental strand, 43520878 - 43520773
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||| ||||  |||||||| ||||||||||| ||||||| ||||| | |  ||||||||||||||||| ||| || ||||| | |||||||| |    
T  43520878 acacgagtaaattattcaaatgttcatcggcagttaactgccgaaattttaaagaatcggctgcagttaactgctgaggaaaacttcggcagttaactac 43520779  T
Q  598 cgagga 603  Q
    ||||||    
T  43520778 cgagga 43520773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 527 - 584
Target Start/End: Complemental strand, 44841947 - 44841890
Alignment:
Q  527 gcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||||||||| |||||    
T  44841947 gcagttaactgccgaagttttagaaatacggttgcagttaactgccgagaaaaacttc 44841890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 579
Target Start/End: Original strand, 44885686 - 44885767
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaat 579  Q
    ||||||||||||||| ||||| |  |||||||||||| ||  |||||||||||||  ||| |||||||||||||||||||||    
T  44885686 acacgagtaatttatttaaatatctttcggcagttaactgttgaagttttagaaaatcggttgcagttaactgccgagaaat 44885767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 520 - 650
Target Start/End: Complemental strand, 486131 - 485996
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| | ||||| ||||   |||||||||||||||||||| |||||   ||| || | |||||||||||||||| ||||||  |||| |    
T  486131 ttcttcggcagttaactaccgaaattttctcaaatccggctgcagttaactaccgaggtttacctcggtagttaactgccgaggaacttctgcactacaa 486032  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  486031 aatctggcagaatctcctctcatccattattgatct 485996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 497 - 569
Target Start/End: Original strand, 39831126 - 39831198
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaact 569  Q
    ||||||||||||||| |||||||  | |||| |||||| ||||||| ||||||||| ||||||||||||||||    
T  39831126 cacacgagtaatttacctaaatgcccctcggtagttaactgccgaaattttagaaaaccggctgcagttaact 39831198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 15030845 - 15030960
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| |||   |||||  |||||| ||| || |||||||||||| || || ||||| |||||||||||||||| || || || ||    
T  15030845 ggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggg 15030944  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  15030945 agttaactgccgagga 15030960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 593 - 652
Target Start/End: Original strand, 24860448 - 24860507
Alignment:
Q  593 actgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||| ||||||||||||||| |||| || |||||||||||||||| |||||||||||||    
T  24860448 actgcggaggatcttctgctataaatttgacagaagctctctcatctattattcatctca 24860507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 32584049 - 32584128
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||| |||||| || ||||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |||||||    
T  32584049 tcggtagttaactgtcgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaacttccgagga 32584128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 588 - 650
Target Start/End: Original strand, 37779713 - 37779773
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 650  Q
    ||||||||| ||||||| |||||||||||||||| ||||||  ||||||||||||||||||||    
T  37779713 agttaactgtcgaggatattctgctacaaatctgacagaag--ctctcatccattattcatct 37779773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 603
Target Start/End: Original strand, 41016415 - 41016490
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||| | ||||||||||||||||||  |||||||||||||||||| || || || | ||||||||||||||||    
T  41016415 cagttaactaccgaagttttagaaatccaactgcagttaactgccgaggaaaacctcggtagttaactgccgagga 41016490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 571
Target Start/End: Original strand, 36127342 - 36127416
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgc 571  Q
    ||||||||||||||| ||||| ||   ||||||||||| || |||||||||||||| ||||||| ||||||||||    
T  36127342 cacacgagtaatttacctaaacgtctctcggcagttaactgacgaagttttagaaaaccggctgaagttaactgc 36127416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 603
Target Start/End: Original strand, 13782206 - 13782311
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||| |||  ||||||| | ||||||||||| |||| || ||||| | | ||| ||||| |||||||||||| || ||||| | ||||||||||    
T  13782206 acacgagtaaattacttaaatgtccctcggcagttaactgccaaaattttaaagaaccgactgcaattaactgccgaggaaaacttcggcagttaactgc 13782305  T
Q  598 cgagga 603  Q
    ||||||    
T  13782306 cgagga 13782311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 575
Target Start/End: Complemental strand, 41250210 - 41250097
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||| |||||||||||||| | || ||||||||||||| |  |   ||  | |||| |||||| || |||||||||||||||||| ||||    
T  41250210 gagaattgttgttcccacattgcataaggttgtggcacacgagtaattgacgtttttgcccctcggtagttaactgtcgaagttttagaaatccgactgc 41250111  T
Q  562 agttaactgccgag 575  Q
    |||| |||||||||    
T  41250110 agtttactgccgag 41250097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 528 - 572
Target Start/End: Complemental strand, 39939287 - 39939243
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgcc 572  Q
    ||||||| || ||||||||||||||||||||||||||||||||||    
T  39939287 cagttaattgtcgaagttttagaaatccggctgcagttaactgcc 39939243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 584
Target Start/End: Complemental strand, 43363336 - 43363276
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    |||||| |||| |||||||||||||||||| ||||||||||||||| ||||| || |||||    
T  43363336 tcggcacttaactgccgaagttttagaaatacggctgcagttaactaccgaggaaaacttc 43363276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 184664 - 184549
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| |||   |||||  |||||| ||| || |||||||||||| || || ||||| |||||||||||||||| || || || |     
T  184664 ggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggt 184565  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  184564 agttaactgccgagga 184549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 7121862 - 7121783
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| || |||| ||||| | | |||||||||||||||||| ||| || ||||| | ||||||||||||||||    
T  7121862 tcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgctgaggaaaacttcggcagttaactgccgagga 7121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 498 - 593
Target Start/End: Original strand, 16939351 - 16939446
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaa 593  Q
    |||||||||||||| | ||||    |||||||||||| ||| ||| ||||| | | |||||||||||||||||||||| || ||||||| ||||||    
T  16939351 acacgagtaatttacccaaatacctttcggcagttaactgctgaaattttaaagaaccggctgcagttaactgccgaggaagacttcagtagttaa 16939446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 571
Target Start/End: Complemental strand, 34235199 - 34235152
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgc 571  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  34235199 tcggcagttaactgccgaagttttagaaattcggctacagttaactgc 34235152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 35962304 - 35962383
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| || ||| |  || ||||||||||| ||||||||||||||| || || || ||||||||||||||||||    
T  35962304 tcggcagttaactgtcgaggaatttgaaatccggctacagttaactgccgaggaaaacctcgggagttaactgccgagga 35962383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 603
Target Start/End: Original strand, 43262443 - 43262497
Alignment:
Q  549 gaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||| ||||||||||||||||||| || ||||| | ||||||||||||||||    
T  43262443 gaaatccagctgcagttaactgccgaggaaaacttcggtagttaactgccgagga 43262497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 603
Target Start/End: Complemental strand, 546499 - 546418
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||| || |||| |||||||||||||||||| |||||   ||||||||||||| || || || |||||||||||| |||||    
T  546499 cttcgacaattaactgccgaagttttagaaattcggctattgttaactgccgaggaaaacctcgggagttaactgctgagga 546418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 542
Target Start/End: Complemental strand, 3696193 - 3696128
Alignment:
Q  477 cacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    |||||||||||||| | || ||||||||||||||||| |||||  | ||||||||||| |||||||    
T  3696193 cacattgcataaggttgtgtcacacgagtaatttatcgaaatgcccctcggcagttaactgccgaa 3696128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 596
Target Start/End: Complemental strand, 13783185 - 13783112
Alignment:
Q  523 ttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactg 596  Q
    |||||||||||| || |||| ||||| | | |||||||||||||||||||||| || ||||| | |||||||||    
T  13783185 ttcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgccgaggaaaacttcggcagttaactg 13783112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 575
Target Start/End: Original strand, 28694049 - 28694126
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||||| |||   |||||| | ||||||||||| |||||||||||   ||| ||||||||||||||||||||||    
T  28694049 acacgagtaaattactcaaatgtccctcggcagttaactgccgaagtttagtaaaaccggctgcagttaactgccgag 28694126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 43262359 - 43262404
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaa 507  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||||    
T  43262359 gagaattgttgttctcacattacataaggctgtgccacacgagtaa 43262404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 28618547 - 28618436
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||| ||||||||| | |||||  ||||||||||||| |||||||   |||  || |||||||||||||| ||||||| || ||||| | |    
T  28618547 ggctatgccacacaagtaatttacccaaatgcccttcggcagttaactgccgaa---ttatgaaaccggctgcagttaaatgccgaggaaaacttcggta 28618451  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  28618450 gtaaactaccgagga 28618436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 603
Target Start/End: Complemental strand, 7344613 - 7344554
Alignment:
Q  544 ttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| || ||||| |||||||||||||||| || || || ||||||||||||||||||    
T  7344613 ttttaggaaaccggcggcagttaactgccgaggaaaacctcgggagttaactgccgagga 7344554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 603
Target Start/End: Complemental strand, 17924339 - 17924280
Alignment:
Q  544 ttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| || ||||| ||||||||||||||||||| || || | ||||||||||||||||    
T  17924339 ttttaggaaaccggcggcagttaactgccgagaaaaacctcggtagttaactgccgagga 17924280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 569
Target Start/End: Original strand, 31745153 - 31745224
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaact 569  Q
    |||||||||||||| | ||||   |||||| |||||| |||||||||||||||||  | |||||||||||||    
T  31745153 acacgagtaatttacccaaatacccttcggtagttaactgccgaagttttagaaaaacagctgcagttaact 31745224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 36678041 - 36677926
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| |||   |||||  |||||| ||| || |||||||||||| || || ||||| |||||||||||||||| || || || |     
T  36678041 ggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggt 36677942  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||| ||||    
T  36677941 agttaactgccaagga 36677926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 603
Target Start/End: Original strand, 42481558 - 42481637
Alignment:
Q  525 cggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||| |||||||||||| || |||||||| |||||||  ||||||| || || || | ||||||||||||||||    
T  42481558 cggcagttaattgccgaagtttttaggaatccggcggcagttaggtgccgagtaaaacctcggtagttaactgccgagga 42481637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 509
Target Start/End: Original strand, 44050749 - 44050796
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatt 509  Q
    |||||||| ||||| |||||||||||||||| || |||||||||||||    
T  44050749 gagaattgctgttcccacattgcataaggctgtggcacacgagtaatt 44050796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 45066473 - 45066358
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| |||   |||||  |||||| ||| || |||||||||||| || || ||||| |||||||||||||||| || || || |     
T  45066473 ggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggt 45066374  T
Q  588 agttaactgccgagga 603  Q
    | ||||||||||||||    
T  45066373 aattaactgccgagga 45066358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 547
Target Start/End: Complemental strand, 25646 - 25588
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt 547  Q
    |||| ||||||||||||||  |||| |||||  ||||||||||||| ||||||||||||    
T  25646 ggctgtgccacacgagtaaaatatcaaaatgcccttcggcagttaactgccgaagtttt 25588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 524 - 602
Target Start/End: Original strand, 1114740 - 1114818
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagg 602  Q
    ||||||||||| ||||||    || ||||||||||||||||||||||||||| ||  | || | |||||||||||||||    
T  1114740 tcggcagttaactgccgagaaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgagg 1114818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 524 - 578
Target Start/End: Complemental strand, 1116264 - 1116210
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaa 578  Q
    ||||||||||| || ||| |  || ||||||||||||||||||||||||||||||    
T  1116264 tcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgagaaa 1116210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 461 - 507
Target Start/End: Complemental strand, 7577728 - 7577682
Alignment:
Q  461 ggagaattgatgttctcacattgcataaggctttgccacacgagtaa 507  Q
    ||||||||| ||||| |||||| ||||||||| ||||||||||||||    
T  7577728 ggagaattgctgttcccacattacataaggctgtgccacacgagtaa 7577682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 603
Target Start/End: Complemental strand, 16940378 - 16940273
Alignment:
Q  498 acacgagtaatttatctaaatgt-tcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactg 596  Q
    |||||||||| |||  ||||||| |||| ||||||||| ||||||| ||||| | | |||| |||||||||||| |||| || | ||| | |||||||||    
T  16940378 acacgagtaaattacttaaatgtctctt-ggcagttaagtgccgaaattttaaagaaccggttgcagttaactgtcgaggaaaatttcggcagttaactg 16940280  T
Q  597 ccgagga 603  Q
    |||||||    
T  16940279 ccgagga 16940273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 554 - 600
Target Start/End: Original strand, 18438661 - 18438707
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    |||||||||||||||||||||| || || || |||||||||||||||    
T  18438661 ccggctgcagttaactgccgaggaaaacctcgggagttaactgccga 18438707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 575
Target Start/End: Complemental strand, 20859707 - 20859629
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||| |||||| |||||||| | ||| ||||||| |||||||||||  | || ||||||||| |||||| |||||    
T  20859707 cacacgaggaatttacctaaatgtccctcgacagttaactgccgaagtttgtggaaaccggctgcatttaactcccgag 20859629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 575
Target Start/End: Complemental strand, 34503197 - 34503087
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  |||||||||||||| | || ||||||||||||||| | ||||   | ||||||||||| ||||||| || | |||  ||||||||    
T  34503197 gagaattgttgttgacacattgcataagggtgtgtcacacgagtaatttaccgaaatacccctcggcagttaactgccgaa-ttatggaa--ccggctgc 34503101  T
Q  562 agttaactgccgag 575  Q
    |||||||| |||||    
T  34503100 agttaactaccgag 34503087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 547
Target Start/End: Complemental strand, 42485650 - 42485592
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt 547  Q
    |||| ||||||||||||||  |||| |||||| ||||||||||||| || |||||||||    
T  42485650 ggctgtgccacacgagtaaaatatcaaaatgtccttcggcagttaactgtcgaagtttt 42485592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 511
Target Start/End: Original strand, 3641580 - 3641629
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaattta 511  Q
    |||||||||||||| ||||||  |||||||| || |||||||||||||||    
T  3641580 gagaattgatgttcccacatttgataaggctatggcacacgagtaattta 3641629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 4528220 - 4528277
Alignment:
Q  477 cacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaa 534  Q
    |||||||||||| | | || ||||| ||||||||||| |||||| |||||||||||||    
T  4528220 cacattgcataaagttgtgtcacactagtaatttatcaaaatgtccttcggcagttaa 4528277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 5532423 - 5532476
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    |||| |||||||||||||||||| | |||||  ||||||||||||| |||||||    
T  5532423 ggctatgccacacgagtaatttacccaaatgcccttcggcagttaactgccgaa 5532476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 603
Target Start/End: Original strand, 21406294 - 21406343
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||||| ||||| || ||||| | ||||||||||||||||    
T  21406294 ccggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 21406343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 603
Target Start/End: Original strand, 21800786 - 21800835
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||||| ||||| || ||||| | ||||||||||||||||    
T  21800786 ccggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 21800835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 522 - 603
Target Start/End: Complemental strand, 34892887 - 34892806
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| | |  |||| ||||| | | ||| |||||||||||||||||| || ||||| | ||||||||||||||||    
T  34892887 cttcggcagttgactttcgaaattttaaagaaccgactgcagttaactgccgaggaaaacttcggcagttaactgccgagga 34892806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 575
Target Start/End: Complemental strand, 36346007 - 36345930
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||||| |||   |||||||||||| ||||||| ||||||| ||| | |   ||||||||||||||||||||||    
T  36346007 acacgagtaaattactcaaatgttcttcgacagttaactgccgaaatttaaaagcaccggctgcagttaactgccgag 36345930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 542
Target Start/End: Original strand, 45252006 - 45252051
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    ||||| ||||||||||| |||||||| ||||||||||| |||||||    
T  45252006 cacactagtaatttatcaaaatgttcatcggcagttaactgccgaa 45252051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 515 - 575
Target Start/End: Original strand, 3085529 - 3085589
Alignment:
Q  515 aaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||| |||| |||||| | ||||| ||||| | | ||||||||||||||||||||||    
T  3085529 aaatgttcctcggtagttaactaccgaaattttaaagaaccggctgcagttaactgccgag 3085589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 478 - 542
Target Start/End: Original strand, 6268936 - 6269000
Alignment:
Q  478 acattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    ||||||||||||| | || ||||||||||||||||| |||||| | ||| | ||||| |||||||    
T  6268936 acattgcataaggttgtgtcacacgagtaatttatcgaaatgtccctcgacggttaactgccgaa 6269000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 494 - 542
Target Start/End: Original strand, 38603280 - 38603328
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    |||||||||||||| |||  ||||||||| ||||||||||| |||||||    
T  38603280 tgccacacgagtaaattacttaaatgttcctcggcagttaactgccgaa 38603328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 497 - 576
Target Start/End: Original strand, 39491077 - 39491156
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttt-tagaaatccggctgcagttaactgccgaga 576  Q
    |||||||||||||||  |||||||  |||||||||||| || |||| ||| |||||| |||||| ||||||||| ||||||    
T  39491077 cacacgagtaatttacataaatgtctttcggcagttaactgtcgaattttatagaaa-ccggctacagttaacttccgaga 39491156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 602
Target Start/End: Complemental strand, 40077300 - 40077248
Alignment:
Q  550 aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagg 602  Q
    ||||||| |||||||||||||||||| || || || | |||||||||||||||    
T  40077300 aaatccgactgcagttaactgccgaggaaaacctcggtagttaactgccgagg 40077248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 498 - 542
Target Start/End: Complemental strand, 40745383 - 40745339
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    |||||||||||||||| |||||| | ||||||||||| |||||||    
T  40745383 acacgagtaatttatccaaatgtccctcggcagttaactgccgaa 40745339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 546 - 578
Target Start/End: Complemental strand, 41276914 - 41276882
Alignment:
Q  546 ttagaaatccggctgcagttaactgccgagaaa 578  Q
    |||||||| ||||||||||||||||||||||||    
T  41276914 ttagaaattcggctgcagttaactgccgagaaa 41276882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 515 - 595
Target Start/End: Complemental strand, 44727589 - 44727510
Alignment:
Q  515 aaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaact 595  Q
    |||||| |||||||| |||| ||||||||||| | ||| | |||||||||||||| ||||| || ||||| | ||||||||    
T  44727589 aaatgtccttcggcaattaactgccgaagtttgaaaaaac-ggctgcagttaactaccgaggaaaacttcggtagttaact 44727510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 524 - 580
Target Start/End: Original strand, 45454403 - 45454459
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaata 580  Q
    ||||||||||| |||||| |  || ||||||||| ||||||||||||||||| ||||    
T  45454403 tcggcagttaactgccgaggaatttgaaatccggatgcagttaactgccgaggaata 45454459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 4e-37; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 522 - 652
Target Start/End: Original strand, 17838645 - 17838776
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctg 621  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| ||||| || || ||   ||||||||||||| ||||||||||||||||||||    
T  17838645 cttcggcagttaactgccgaagttttagaaatccggctgcagtaaactaccgaggaaaacctcgatagttaactgccgacgatcttctgctacaaatctg 17838744  T
Q  622 gcagaagct-ctctcatccattattcatctca 652  Q
    |||||| || ||||||||||||||||||||||    
T  17838745 gcagaatctcctctcatccattattcatctca 17838776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 462 - 603
Target Start/End: Original strand, 17834422 - 17834563
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||||||||  |||||| ||||||||| |||||||||||||||||||  |||||  ||||||||||||| |||||||||||||| || ||||| ||    
T  17834422 gagaattgatgtttacacattacataaggctgtgccacacgagtaatttatgaaaatgcccttcggcagttaactgccgaagttttagtaaaccggcggc 17834521  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||| || ||||| | ||||||||||||||||    
T  17834522 agttaactgccgaggaaaacttcggtagttaactgccgagga 17834563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 555 - 650
Target Start/End: Complemental strand, 30355284 - 30355189
Alignment:
Q  555 cggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 650  Q
    ||||||||||||||||||||| || || || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30355284 cggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 30355189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 546 - 652
Target Start/End: Original strand, 40587680 - 40587786
Alignment:
Q  546 ttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattatt 645  Q
    ||||||||||| ||||||||||||| |||| || || |||| |||||||||||||||||||| ||||| |||||||  ||||||||||||||||||||||    
T  40587680 ttagaaatccgactgcagttaactgtcgaggaaaacctcagtagttaactgccgaggatcttatgctataaatctgaaagaagctctctcatccattatt 40587779  T
Q  646 catctca 652  Q
    |||||||    
T  40587780 catctca 40587786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 562 - 652
Target Start/End: Original strand, 41047812 - 41047902
Alignment:
Q  562 agttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  41047812 agttaactgccgaggaaaacttcggtagttaactgccgaggatcttctgctacaaatctggaggaagctctctcatccattattcatctca 41047902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 21188438 - 21188374
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21188438 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 21188374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 17841001 - 17840887
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||| |||   |||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| || || || | |    
T  17841001 ggctgtgccacacgagtaaattactcaaatgttcatcggcagttaactgccgaagttttagaaatccgactgcagttaactgccgaggaaaacctcggta 17840902  T
Q  589 gttaactgccgagga 603  Q
    |||||||||||||||    
T  17840901 gttaactgccgagga 17840887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 557 - 652
Target Start/End: Original strand, 42682024 - 42682119
Alignment:
Q  557 gctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||||||||| || || || | | ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  42682024 gctgcagttaactgccgaggaaaacctcggtaattaactgccgaggatcttctgctacaaatctagcataagttctctcatccattattcatctca 42682119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 552 - 649
Target Start/End: Complemental strand, 28980221 - 28980123
Alignment:
Q  552 atccggctgcagttaactgccga-gaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatc 649  Q
    |||||| |||||||||||||||| | || || || | ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  28980221 atccggatgcagttaactgccgaaggaaaacctcggtagttaactgccgaggattttctgctacaaatctgacagaagctctctcatccattattcatc 28980123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 46863356 - 46863292
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46863356 agttaactgccgaagatcttctgctacaaatctggcagaagctctttcatccattattcatctca 46863292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 558 - 652
Target Start/End: Complemental strand, 36394980 - 36394886
Alignment:
Q  558 ctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||| |||| ||||||| || || || | |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  36394980 ctgcaattaagtgccgaggaaaacctcggtagttaactaccgaggatcttctgctacaaatctggcagaagctctctcatccgttattaatctca 36394886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 34139932 - 34139996
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||    
T  34139932 agttaactgccgaggatcttcctctacaaatctggcagaagctctcttatccattattcatctca 34139996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 524 - 578
Target Start/End: Original strand, 46738799 - 46738853
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaa 578  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  46738799 tcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgagaaa 46738853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 650
Target Start/End: Complemental strand, 9367805 - 9367670
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| |||    |||||||||||||||||||||||||| || || || | |||||||||||||||| ||||||  |||| |    
T  9367805 ttcttcggcagttaactgccgaaatttgctcaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaacttctgcactacaa 9367706  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  9367705 aatctggcagaatctcctctcatccattattgatct 9367670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 7031 - 7145
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||| |||   |||||  | ||||||||||| | |||||||||||||||| ||||||||||||||||||||| || ||||| | |    
T  7031 ggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactaccgaagttttagaaatacggctgcagttaactgccgaggaaaacttcggca 7130  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  7131 gtaaactaccgagga 7145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 494 - 575
Target Start/End: Original strand, 27657005 - 27657086
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||||||||| ||||  |||||  | ||||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  27657005 tgccacacgagtaaattattcaaatgcccctcggcagttaactgccaaagttttagaaatacggctgcagttaactgccgag 27657086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 583 - 648
Target Start/End: Complemental strand, 43686924 - 43686859
Alignment:
Q  583 tcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcat 648  Q
    |||| |||||||||||||| || |||||||||||||||| || |||||||||||||||||||||||    
T  43686924 tcagtagttaactgccgagaattttctgctacaaatctgacataagctctctcatccattattcat 43686859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 28115544 - 28115480
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||  |||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  28115544 agttaactgttgagggtcttctgctacaaatctagcataagctctctcatccattattcatctca 28115480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 596 - 652
Target Start/End: Original strand, 48269710 - 48269766
Alignment:
Q  596 gccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  48269710 gccgaggatcttctgctacaaatctgacaaaagttctctcatccattattcatctca 48269766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 12210666 - 12210587
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||||||||| || ||||| | ||| |||| |||||||    
T  12210666 tcggcagttaactgccgaagttttagaaatacggccgcagttaactgccgaggaaaacttcggcagtaaactaccgagga 12210587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 593 - 652
Target Start/End: Complemental strand, 45364227 - 45364168
Alignment:
Q  593 actgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||| ||||||||||||| ||||||||||| ||| |||||||||||||    
T  45364227 actgccgaggatcttcggctacaaatctggtagaagctctcttatctattattcatctca 45364168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 494 - 572
Target Start/End: Complemental strand, 13921370 - 13921292
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgcc 572  Q
    |||||||||||||| |||   ||||| || ||||||||||| |||||||||||||||||||| || |||||||||||||    
T  13921370 tgccacacgagtaaattactcaaatgctcctcggcagttaactgccgaagttttagaaatccagcggcagttaactgcc 13921292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 498 - 600
Target Start/End: Complemental strand, 38555515 - 38555413
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    ||||||||||||||   |||| | ||||||||||||| ||||||| ||||| | | || ||||||||||||||||||| || ||||| | ||||||||||    
T  38555515 acacgagtaatttactcaaatatccttcggcagttaactgccgaaattttaaagaaccagctgcagttaactgccgaggaaaacttcggcagttaactgc 38555416  T
Q  598 cga 600  Q
    |||    
T  38555415 cga 38555413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 463 - 569
Target Start/End: Original strand, 45256923 - 45257029
Alignment:
Q  463 agaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgca 562  Q
    ||||||| ||||  ||||||  ||||| || ||||||| |||||||||| |||||||| ||||||||||||| || ||||||||||| || ||||| |||    
T  45256923 agaattgctgtttacacatttgataagactgtgccacatgagtaatttacctaaatgtccttcggcagttaattgtcgaagttttagtaaaccggcggca 45257022  T
Q  563 gttaact 569  Q
    | |||||    
T  45257023 gctaact 45257029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 575
Target Start/End: Complemental strand, 46908584 - 46908498
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||| |||||||||||||| |||| |||||     ||||||||||| || ||||||||||||||| |||||||||||||||||||||    
T  46908584 ggctgtgccacacgagtaaattatttaaatacctctcggcagttaactgtcgaagttttagaaatacggctgcagttaactgccgag 46908498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 575
Target Start/End: Complemental strand, 45258142 - 45258029
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||||||||||  ||  |||| |||||||||||||| |||   |||||  | ||||||||||| |||  || |||||||||| |||||||    
T  45258142 gagaattgttgttctcacatttgatttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactgcataaattttagaaatacggctgc 45258043  T
Q  562 agttaactgccgag 575  Q
    ||||||||||||||    
T  45258042 agttaactgccgag 45258029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 8123 - 8044
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| | | |||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |||||||    
T  8123 tcggcagttaactacagaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaactaccgagga 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 497 - 600
Target Start/End: Complemental strand, 5541646 - 5541543
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactg 596  Q
    ||||||||||||||| |||||||  ||| ||||||||| || | |||||||||||| ||||| |||||||||| ||||| | | | || | |||||||||    
T  5541646 cacacgagtaatttacctaaatgccctttggcagttaactgtcaaagttttagaaaaccggcggcagttaactcccgaggatttcctcggcagttaactg 5541547  T
Q  597 ccga 600  Q
    ||||    
T  5541546 ccga 5541543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 10098229 - 10098114
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| |||   |||||  |||||| ||| || |||||||||||| || || |||||||||||||||||||||| || || || ||    
T  10098229 ggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggctgcagttaactgccgaggaaaacctcggg 10098130  T
Q  588 agttaactgccgagga 603  Q
    ||||||||| ||||||    
T  10098129 agttaactgacgagga 10098114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 42583136 - 42583057
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| ||  |||||||||||||| ||||||||||||||||||||| || ||||| | ||| |||| |||||||    
T  42583136 tcggcagttaactgtagaagttttagaaatacggctgcagttaactgccgaggaaaacttcggcagtaaactaccgagga 42583057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 489 - 575
Target Start/End: Original strand, 10516981 - 10517067
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||| ||||||||||||| ||||   |||||||||| ||||||||| || ||||||||||| || ||||| ||||||||||| ||||    
T  10516981 ggctgtgccacacgagtactttacgaaaatgttctttggcagttaactgtcgaagttttagtaaaccggcagcagttaactgtcgag 10517067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 575
Target Start/End: Complemental strand, 19804592 - 19804514
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||| |||||||  | |||| |||||| |||||||||||  | || ||||||||||||||||||||||    
T  19804592 cacacgagtaatttacctaaatgcccctcggtagttaactgccgaagtttgtggaaaccggctgcagttaactgccgag 19804514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 574
Target Start/End: Complemental strand, 26833609 - 26833500
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||  |||||| ||||||||| ||| |||| ||||||||||| |||||  | ||||||||||| ||||||| || |||||  ||||||||    
T  26833609 gagaattgttgttgacacattacataaggctgtgctacactagtaatttatcgaaatgcccatcggcagttaactgccgaa-ttatagaa--ccggctgc 26833513  T
Q  562 agttaactgccga 574  Q
    |||||||| ||||    
T  26833512 agttaactaccga 26833500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 594
Target Start/End: Original strand, 13644392 - 13644488
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaac 594  Q
    |||||||||||||| | |||| | || |||||||||| ||||||| ||||| | | |||||||||||||| ||||||| || ||||| | |||||||    
T  13644392 acacgagtaatttacccaaatatcctacggcagttaactgccgaaattttaaagaaccggctgcagttaaatgccgaggaaaacttcggcagttaac 13644488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 494 - 575
Target Start/End: Complemental strand, 7975716 - 7975634
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaag-ttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||| ||||   |||||| |||||||||| || |||||||| |||||| || ||||| ||||||||||||||||    
T  7975716 tgccacacgagtactttacgaaaatgtccttcggcagtaaactgccgaagtttttagtaaaccggcggcagttaactgccgag 7975634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 524 - 602
Target Start/End: Complemental strand, 9494882 - 9494804
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagg 602  Q
    ||||||||||| |||||| |  ||| ||| |||||||||||||||||||||| || || || ||||||||||| |||||    
T  9494882 tcggcagttaactgccgaggaattaaaaaaccggctgcagttaactgccgaggaaaacctcgggagttaactgtcgagg 9494804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 522 - 604
Target Start/End: Original strand, 42499404 - 42499486
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggat 604  Q
    ||||| ||||||| |||||| |  || |||||||| |||||||||||||||||| || || || | |||||||||||||||||    
T  42499404 cttcgacagttaattgccgaggaatttgaaatccgactgcagttaactgccgaggaaaacctcggtagttaactgccgaggat 42499486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 603
Target Start/End: Original strand, 18105360 - 18105449
Alignment:
Q  515 aaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| |||||| ||| || |||||||||||| || || ||||| |||||||||||||||| || || || | ||||||||||||||||    
T  18105360 aaatgtccttcggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 18105449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 575
Target Start/End: Original strand, 34139892 - 34139945
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||| | |||| ||||||||  ||||||||||||||||||||||||||||||    
T  34139892 cttcggtaattaactgccgaagaattagaaatccggctgcagttaactgccgag 34139945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 559
Target Start/End: Original strand, 47521388 - 47521449
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggct 559  Q
    |||||||||||||| |||||||    ||||||||||| ||||||||||||||||| ||||||    
T  47521388 acacgagtaatttacctaaatgcctctcggcagttaactgccgaagttttagaaaaccggct 47521449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 46907501 - 46907612
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcagga 588  Q
    |||| |||||||||||||| |||   |||||  ||||||||||||| |||||||   |||  || |||||||||||||||||||||| || ||||| | |    
T  46907501 ggctatgccacacgagtaaattactcaaatgcccttcggcagttaactgccgaa---ttatgaaaccggctgcagttaactgccgaggaaaacttcggca 46907597  T
Q  589 gttaactgccgagga 603  Q
    || |||| |||||||    
T  46907598 gtaaactaccgagga 46907612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 614 - 650
Target Start/End: Complemental strand, 48316295 - 48316259
Alignment:
Q  614 caaatctggcagaagctctctcatccattattcatct 650  Q
    |||||||||||||||||||||||||||||||| ||||    
T  48316295 caaatctggcagaagctctctcatccattattaatct 48316259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 618801 - 618750
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||| |||||| |  || |||||||||||||||||||||||||||    
T  618801 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgag 618750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 603
Target Start/End: Complemental strand, 14102420 - 14102345
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||| ||||||| ||||| | |  |||||||| |||||||||||| || ||||| | ||||||||||||||||    
T  14102420 cagttaactgccgaaattttaaagaatcggctgcaattaactgccgaggaaaacttcggcagttaactgccgagga 14102345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 603
Target Start/End: Complemental strand, 14412437 - 14412362
Alignment:
Q  528 cagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||| ||||||| ||||| | |  |||||||| |||||||||||| || ||||| | ||||||||||||||||    
T  14412437 cagttaactgccgaaattttaaagaatcggctgcaattaactgccgaggaaaacttcggcagttaactgccgagga 14412362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 575
Target Start/End: Complemental strand, 27453670 - 27453619
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||| |||||| |  ||| ||||||||||||||||||||||||||    
T  27453670 tcggcagttaactgccgaggaattaaaaatccggctgcagttaactgccgag 27453619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 576
Target Start/End: Complemental strand, 37345206 - 37345127
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgaga 576  Q
    ||||||||||||||| |||||||| ||||||||||||| || |||| |||  | |  ||| |||||||||||| ||||||    
T  37345206 cacacgagtaatttacctaaatgtccttcggcagttaactgtcgaattttatggataccgactgcagttaactcccgaga 37345127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 603
Target Start/End: Complemental strand, 41884238 - 41884123
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| ||||||||||||||  ||   |||||| |||||||||||   | |||||||||| || || ||||| |||||||||||||||| || || || |     
T  41884238 ggctgtgccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcgga 41884139  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  41884138 agttaactgccgagga 41884123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 603
Target Start/End: Complemental strand, 48407363 - 48407284
Alignment:
Q  525 cggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||| |||||||||||| |  ||||||||||||||||  ||||||| || || || | ||||||||||||||||    
T  48407363 cggcagttaactgccgaagtttttatgaatccggctgcagttaggtgccgagtaaaacctcggtagttaactgccgagga 48407284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 555 - 601
Target Start/End: Original strand, 10705276 - 10705322
Alignment:
Q  555 cggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    |||||||||||||||||||||||| || |  ||||||||||||||||    
T  10705276 cggctgcagttaactgccgagaaaaaccttgggagttaactgccgag 10705322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 542
Target Start/End: Original strand, 12080394 - 12080436
Alignment:
Q  500 acgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    |||||||||||||| ||||||||||||| |||||| |||||||    
T  12080394 acgagtaatttatccaaatgttcttcggtagttaactgccgaa 12080436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 524 - 578
Target Start/End: Original strand, 45361646 - 45361700
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaa 578  Q
    ||||||||||| || ||| |  ||| |||||||||||||||||||||||||||||    
T  45361646 tcggcagttaactgacgaggaattaaaaatccggctgcagttaactgccgagaaa 45361700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 603
Target Start/End: Complemental strand, 11886986 - 11886882
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||||||||||||| | |||| | |||| ||| |||| ||||||| | ||| | | |||||||||||||||||| ||| || ||||| | |||||| |||    
T  11886986 acacgagtaatttacccaaatatccttcagcaattaactgccgaaatcttaaagaaccggctgcagttaactgctgaggaaaacttcggaagttaa-tgc 11886888  T
Q  598 cgagga 603  Q
    ||||||    
T  11886887 cgagga 11886882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 603
Target Start/End: Original strand, 29112400 - 29112449
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||||||||||| || ||||| | |||||||||| |||||    
T  29112400 ccggctgcagttaactgccgaggaaaacttcggcagttaactgctgagga 29112449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 603
Target Start/End: Original strand, 34738383 - 34738440
Alignment:
Q  546 ttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||| |||||||||||| ||||||| || || || | ||||||||||||||||    
T  34738383 ttagaaatctggctgcagttaaatgccgaggaaaacctcggtagttaactgccgagga 34738440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 498 - 542
Target Start/End: Complemental strand, 12081295 - 12081251
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaa 542  Q
    |||||||||||||||| |||||  ||||||||||||| |||||||    
T  12081295 acacgagtaatttatccaaatgcccttcggcagttaattgccgaa 12081251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 520 - 575
Target Start/End: Original strand, 20564191 - 20564247
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||| ||||||| ||||   ||||||||| ||||||||||||||||    
T  20564191 ttcttcggcagttaactgccgaaattttctcaaatccggcagcagttaactgccgag 20564247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 554 - 602
Target Start/End: Original strand, 37340329 - 37340377
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgagg 602  Q
    |||| |||||||||||||||||||| || || | |||||||||||||||    
T  37340329 ccggttgcagttaactgccgagaaaaacctcggtagttaactgccgagg 37340377  T

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Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 554 - 652
Target Start/End: Complemental strand, 12784003 - 12783905
Alignment:
Q  554 ccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||| ||| |||| || || |||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  12784003 ccggctgcagttagctgtcgaggaaaacctcagtagttaactgccgaggatcttctgctacaaatctggaaaaagctctctcatccattattcatctca 12783905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 520 - 650
Target Start/End: Original strand, 6204819 - 6204954
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| ||||   |||||||||||||||||||||||||| || || || | |||||||||||||||||||||||  |||| |    
T  6204819 ttcttcggcagttaactgccgaaattttctcaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaa 6204918  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  6204919 aatctggcagaatctcctctcatccattattgatct 6204954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 29061331 - 29061395
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29061331 agttaacttccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 29061395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 590 - 652
Target Start/End: Original strand, 29065791 - 29065853
Alignment:
Q  590 ttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29065791 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29065853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 590 - 652
Target Start/End: Original strand, 29074804 - 29074866
Alignment:
Q  590 ttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29074804 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29074866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 590 - 652
Target Start/End: Original strand, 29079568 - 29079630
Alignment:
Q  590 ttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29079568 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29079630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 590 - 652
Target Start/End: Original strand, 29107377 - 29107439
Alignment:
Q  590 ttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29107377 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29107439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 520 - 650
Target Start/End: Original strand, 11691786 - 11691921
Alignment:
Q  520 ttcttcggcagttaaatgccgaagttttag-aaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| |||    |||||||||||||||||||||||||| || || || | |||||||||||||||||||||||  |||| |    
T  11691786 ttcttcggcagttaactgccgaaatttgctcaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaa 11691885  T
Q  616 aatctggcagaagct-ctctcatccattattcatct 650  Q
    |||||||||||| || ||||||||||||||| ||||    
T  11691886 aatctggcagaatctcctctcatccattattgatct 11691921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 13401547 - 13401611
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  13401547 agttaactaccgaggatcttctgctacaaatatgacagaagctctctcatccattattcatctca 13401611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 481 - 600
Target Start/End: Complemental strand, 29097948 - 29097828
Alignment:
Q  481 ttgcataaggctttgccacacgagtaatttatctaaatgttct-tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaat 579  Q
    |||||||||| |||| ||||||||||||| |  ||  |||||| |||||| |||| || |||| |||||||||||||||||||||||||||| ||||||     
T  29097948 ttgcataaggatttggcacacgagtaattgacgtatttgttctctcggcaattaactgtcgaaattttagaaatccggctgcagttaactgctgagaaaa 29097849  T
Q  580 acttcaggagttaactgccga 600  Q
    ||||| | |||||||||||||    
T  29097848 acttcggtagttaactgccga 29097828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 462 - 603
Target Start/End: Complemental strand, 14012513 - 14012372
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgc 561  Q
    |||||||| ||||| ||||||  |||||||| |||||||||||||| | |  |   ||  |||| |||||||| |||||||||||||||||||||||| |    
T  14012513 gagaattgttgttcccacatttaataaggctgtgccacacgagtaaatgacgtttttgcccttcagcagttaactgccgaagttttagaaatccggcttc 14012414  T
Q  562 agttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||| || || || | |||||||| |||||||    
T  14012413 agttaactgccgaggaaaacatcggcagttaactaccgagga 14012372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 522 - 603
Target Start/End: Complemental strand, 29076401 - 29076320
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||| ||| || || || | ||||||||||||||||    
T  29076401 cttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgctgaggaaaacctcggtagttaactgccgagga 29076320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 522 - 603
Target Start/End: Complemental strand, 29109934 - 29109853
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||| ||| || || || | ||||||||||||||||    
T  29109934 cttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgctgaggaaaacctcggtagttaactgccgagga 29109853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 522 - 603
Target Start/End: Complemental strand, 29111374 - 29111293
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||| ||| || || || | ||||||||||||||||    
T  29111374 cttcggcagttaactgtcgaagttttagaaatccggctgcagttaactgctgaggaaaacctcggtagttaactgccgagga 29111293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 611
Target Start/End: Original strand, 22305100 - 22305192
Alignment:
Q  520 ttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgc 611  Q
    ||||||||||||||| ||||||| |||| | |||||||||||||||||||||||||| || || || | ||||||||||||||||||| ||||    
T  22305100 ttcttcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctcctgc 22305192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 479 - 603
Target Start/End: Complemental strand, 26351217 - 26351093
Alignment:
Q  479 cattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaa 578  Q
    |||| |||||| || ||||||||||||| ||||   ||||||  |||| ||||||| || ||||||||||| || ||||| |||||||||||||||| ||    
T  26351217 cattacataagactgtgccacacgagtactttacgaaaatgtcattcgacagttaactgtcgaagttttagtaaaccggcggcagttaactgccgaggaa 26351118  T
Q  579 tacttcaggagttaactgccgagga 603  Q
     || || ||||||||||||||||||    
T  26351117 aacctcgggagttaactgccgagga 26351093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 32034404 - 32034340
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  32034404 agttaactgccgatgatcttctgctacaaatctggcagaagatctcttatccattattcgtctca 32034340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 603
Target Start/End: Complemental strand, 11840389 - 11840247
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttct-tcggcagttaaatgccgaagttttagaaatccggctg 560  Q
    |||||||| ||||| |||||||||||||||| || ||||||||||||| || |   ||  |  | || |||||| |||||||||||||||||| ||||||    
T  11840389 gagaattgttgttcccacattgcataaggctgtgacacacgagtaattgatgtttttgcccccttggtagttaactgccgaagttttagaaattcggctg 11840290  T
Q  561 cagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||| |||| || || || | ||||||||||||||||    
T  11840289 cagttaactgtcgaggaaaacctcggtagttaactgccgagga 11840247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 8983562 - 8983493
Alignment:
Q  308 acaatttaatcatgataaattatattgttttgaactcttgcatgttagttgaaattaggtttttctctcc 377  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||| |||| |||| ||||||||||||    
T  8983562 acaatttaatcatgataagttatatcgttttgaattcttgcatgttacttgagattaagtttttctctcc 8983493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 522 - 603
Target Start/End: Original strand, 9048070 - 9048151
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||| ||||||||||| | ||| |||||||||||||||| ||||| || ||||| | ||||||||||||||||    
T  9048070 cttcggcagttaactgccgaagtttgaaaaaaccggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 9048151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 524 - 584
Target Start/End: Original strand, 2109514 - 2109574
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||    
T  2109514 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgccgaggaaaacttc 2109574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 522 - 601
Target Start/End: Complemental strand, 15888878 - 15888799
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    ||||||||||||| | ||||||||||||||| |||||||||||||||||||||| || ||| | | |||| |||||||||    
T  15888878 cttcggcagttaactaccgaagttttagaaaaccggctgcagttaactgccgaggaaaactgcggtagtttactgccgag 15888799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 603
Target Start/End: Original strand, 26349928 - 26350050
Alignment:
Q  480 attgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaat 579  Q
    ||||||||||| | || |||||||||| ||||   ||||| |||||||||||||| |||||||| ||||| || ||||| |||||||||||||||| ||     
T  26349928 attgcataaggttgtgtcacacgagtattttacgaaaatgctcttcggcagttaactgccgaag-tttagtaaaccggcggcagttaactgccgaggaaa 26350026  T
Q  580 acttcaggagttaactgccgagga 603  Q
    ||||| | ||| |||| |||||||    
T  26350027 acttctgcagtaaactaccgagga 26350050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 461 - 575
Target Start/End: Original strand, 3501085 - 3501199
Alignment:
Q  461 ggagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctg 560  Q
    ||||||||| ||||  ||||||  |||||||| ||||||||||||| ||||  ||||||  ||||||||||||| || ||||||||||| || || || |    
T  3501085 ggagaattgctgtttacacatttgataaggctctgccacacgagtattttacgtaaatgcccttcggcagttaactgtcgaagttttagtaaaccagcgg 3501184  T
Q  561 cagttaactgccgag 575  Q
    ||||||||| |||||    
T  3501185 cagttaactaccgag 3501199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 608
Target Start/End: Complemental strand, 9049162 - 9049076
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttc 608  Q
    ||||| ||||||| ||||||||||| | ||| |||||||||||||||| ||||| || ||||| | |||||||||||||||| ||||    
T  9049162 cttcgacagttaactgccgaagtttgaaaaaaccggctgcagttaactaccgaggaaaacttcggtagttaactgccgaggaacttc 9049076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 459 - 603
Target Start/End: Complemental strand, 6761013 - 6760869
Alignment:
Q  459 ggggagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggc 558  Q
    ||||||||||| ||||| ||||||   |  |||| |||||||||||||| |||   |||||  | | || |||||| |||||||||||||||||| ||||    
T  6761013 ggggagaattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgccccttggtagttaactgccgaagttttagaaatacggc 6760914  T
Q  559 tgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||| ||||||| || ||||| | ||| |||| |||||||    
T  6760913 tgcagttaattgccgaggaaaacttcggcagtaaactaccgagga 6760869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 496 - 603
Target Start/End: Complemental strand, 17597629 - 17597521
Alignment:
Q  496 ccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaac 594  Q
    |||||||||||| |||   ||||||||||||| ||||   || ||||||||| || || ||||| |||||||||||||||| || ||||| |||||||||    
T  17597629 ccacacgagtaaattactcaaatgttcttcggtagtttgctgtcgaagtttttaggaaaccggcggcagttaactgccgaggaaaacttcgggagttaac 17597530  T
Q  595 tgccgagga 603  Q
    |||||||||    
T  17597529 tgccgagga 17597521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 524 - 572
Target Start/End: Original strand, 25554702 - 25554750
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgcc 572  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  25554702 tcggcagttaactgccgaagttttagaaatacggctgcagttaactgcc 25554750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 561 - 645
Target Start/End: Original strand, 26855929 - 26856013
Alignment:
Q  561 cagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattatt 645  Q
    ||||||||||||||| | | ||||   ||||||||||||| |   | ||||||||||||||||||||||||||||||||||||||    
T  26855929 cagttaactgccgaggatttcttcgcaagttaactgccgatgcgatcctgctacaaatctggcagaagctctctcatccattatt 26856013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 28249846 - 28249961
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaag-ttttagaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| |||   ||||| || ||| |||||||||||||||| ||||||  | ||||| |||||||||||||||| || || || |     
T  28249846 ggctgtgccacacgagtaaattactcaaatgctcctcgacagttaaatgccgaagtttttagggaaccggcggcagttaactgccgaggaaaacctcggt 28249945  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  28249946 agttaactgccgagga 28249961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 588 - 652
Target Start/End: Complemental strand, 17596831 - 17596764
Alignment:
Q  588 agttaactgccgaggatcttctgctac---aaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||| || ||||||||||||||| |   |||||||||||||||| |||||||||||||||||||||    
T  17596831 agttaattgtcgaggatcttctgctgctataaatctggcagaagctatctcatccattattcatctca 17596764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 603
Target Start/End: Complemental strand, 32223615 - 32223510
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgc 597  Q
    |||| |||| |||||  ||||||  |||||||||||| ||||||||||| | |||  ||||||||||||||  ||||| || ||||| | ||||||||||    
T  32223615 acactagtactttatgaaaatgtcattcggcagttaactgccgaagtttgaaaaaatcggctgcagttaaccaccgaggaaaacttcggtagttaactgc 32223516  T
Q  598 cgagga 603  Q
    ||||||    
T  32223515 cgagga 32223510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 650
Target Start/End: Complemental strand, 30258358 - 30258263
Alignment:
Q  557 gctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctac--aaatctggcagaagctctctcatccattattcatct 650  Q
    |||||||||||||| |||| || |  || | |||||||||||||  |||||| |||||  |||||||  |||||||||||||||||||||||||||    
T  30258358 gctgcagttaactgtcgaggaaaatctcggcagttaactgccgataatcttcagctacgaaaatctgagagaagctctctcatccattattcatct 30258263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 13382590 - 13382705
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| |||   |||||| |||||| ||| || || ||||||||| || || ||||| |||||||||||||||| || || || |     
T  13382590 ggctgtgccacacgagtaaattactcaaatgtccttcggtagtaaactgacgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggt 13382689  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  13382690 agttaactgccgagga 13382705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 497 - 567
Target Start/End: Original strand, 24719911 - 24719981
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttt-tagaaatccggctgcagttaa 567  Q
    ||||||| ||||||| |||||||| ||||||||||||| ||||||||||| | ||||| |||||||||||||    
T  24719911 cacacgactaatttacctaaatgtccttcggcagttaactgccgaagtttgtggaaat-cggctgcagttaa 24719981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 31768750 - 31768829
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| |  ||| |||||||||||||||||| ||||||| || || || | ||||||||||||||||    
T  31768750 tcggcagttaactgccgaggaattaaaaatccggctgcagttaattgccgaggaaaacctcggtagttaactgccgagga 31768829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 600
Target Start/End: Complemental strand, 18351755 - 18351643
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaag-ttttagaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| ||||||||||||||  || | ||||||||||||||||||   | |||||| |||||| || ||||  |||||||||||||||| || || || |     
T  18351755 ggctgtgccacacgagtaaaataccaaaatgttcttcggcagtttgctaccgaagattttaggaaaccggtggcagttaactgccgaggaaaacctcggt 18351656  T
Q  588 agttaactgccga 600  Q
    |||||||||||||    
T  18351655 agttaactgccga 18351643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 603
Target Start/End: Original strand, 31146373 - 31146449
Alignment:
Q  527 gcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||| |||||| |  || |||||||||||||||||||||| |||| || || || | ||||||||||||||||    
T  31146373 gcagttaactgccgaggaatttgaaatccggctgcagttaactgtcgaggaaaacatcggtagttaactgccgagga 31146449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 572
Target Start/End: Complemental strand, 31151114 - 31151066
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgcc 572  Q
    ||||||||||| || |||| |||| ||||||||||||||||||||||||    
T  31151114 tcggcagttaactgtcgaaatttttgaaatccggctgcagttaactgcc 31151066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 575
Target Start/End: Original strand, 29061229 - 29061344
Alignment:
Q  461 ggagaattgatgttctcacattgcataaggctttgccacacgagtaatttatctaaatg-ttcttcggcagttaaatgccgaagttttagaaatccggct 559  Q
    ||||||||| ||||| |||||| ||||||||| || |||||||||||||||  |   ||   | ||||||||||| |||||| |  |||||||| |||||    
T  29061229 ggagaattggtgttcccacattacataaggctgtggcacacgagtaatttacttttttgccccctcggcagttaactgccgaggaattagaaattcggct 29061328  T
Q  560 gcagttaactgccgag 575  Q
    |||||||||| |||||    
T  29061329 gcagttaacttccgag 29061344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 526 - 600
Target Start/End: Original strand, 19757271 - 19757345
Alignment:
Q  526 ggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccga 600  Q
    |||| |||| || |||||||||||||||||  ||||||||||||  ||||||| ||||| | |||||||| ||||    
T  19757271 ggcaattaactgtcgaagttttagaaatccaactgcagttaactatcgagaaaaacttcggtagttaactaccga 19757345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 511
Target Start/End: Original strand, 7361125 - 7361174
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaattta 511  Q
    |||||||| ||||  |||||||||||||||| || |||||||||||||||    
T  7361125 gagaattgctgttgacacattgcataaggctgtggcacacgagtaattta 7361174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 11688031 - 11687986
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaa 507  Q
    |||||||| ||||| |||||| ||||||||| ||||||||||||||    
T  11688031 gagaattgctgttcccacattacataaggctgtgccacacgagtaa 11687986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 524 - 569
Target Start/End: Original strand, 29065737 - 29065782
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaact 569  Q
    ||||||||||| |||||| |  ||||||||||||||||||||||||    
T  29065737 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 29065782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 524 - 569
Target Start/End: Original strand, 29074750 - 29074795
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaact 569  Q
    ||||||||||| |||||| |  ||||||||||||||||||||||||    
T  29074750 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 29074795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 524 - 569
Target Start/End: Original strand, 29079514 - 29079559
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaact 569  Q
    ||||||||||| |||||| |  ||||||||||||||||||||||||    
T  29079514 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 29079559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 524 - 569
Target Start/End: Original strand, 29107323 - 29107368
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaact 569  Q
    ||||||||||| |||||| |  ||||||||||||||||||||||||    
T  29107323 tcggcagttaactgccgaggaattagaaatccggctgcagttaact 29107368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 575
Target Start/End: Complemental strand, 31771795 - 31771766
Alignment:
Q  546 ttagaaatccggctgcagttaactgccgag 575  Q
    ||||||||||||||||||||||||||||||    
T  31771795 ttagaaatccggctgcagttaactgccgag 31771766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 555 - 603
Target Start/End: Complemental strand, 8193254 - 8193206
Alignment:
Q  555 cggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||||||||||| || |||||   ||||||||||||||||    
T  8193254 cggctgcagttaactgccgaggaaaacttcgacagttaactgccgagga 8193206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 555 - 603
Target Start/End: Original strand, 11157738 - 11157786
Alignment:
Q  555 cggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||||||||| ||| || ||||||| ||||||||| ||||||    
T  11157738 cggctgcagttaactgctgaggaaaacttcagtagttaactgtcgagga 11157786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 488 - 603
Target Start/End: Original strand, 26712008 - 26712124
Alignment:
Q  488 aggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcag 586  Q
    ||||| ||||| |||||||| |||   |||||  |||||| ||| || |||||||||||| || ||  |||| |||||||||||||||| || || || |    
T  26712008 aggctgtgccaaacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaatcggcggcagttaactgccgaggaaaacctcgg 26712107  T
Q  587 gagttaactgccgagga 603  Q
     ||||||||||||||||    
T  26712108 tagttaactgccgagga 26712124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 28362804 - 28362756
Alignment:
Q  527 gcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||| |||||| |  || |||||||||||||||||||||||||||    
T  28362804 gcagttaactgccgaggaatttgaaatccggctgcagttaactgccgag 28362756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 616 - 652
Target Start/End: Original strand, 34634281 - 34634317
Alignment:
Q  616 aatctggcagaagctctctcatccattattcatctca 652  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  34634281 aatctagcagaagctctctcatccattatttatctca 34634317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 559 - 652
Target Start/End: Complemental strand, 18940 - 18847
Alignment:
Q  559 tgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||   | | || | ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18940 tgcagttaactgccgaggctttcctcggtagttaactgtcgaggatcttctgctacaaatctggcagaagctttctcatccattattcatctca 18847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 53; Significance: 5e-21; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 588 - 652
Target Start/End: Original strand, 857 - 921
Alignment:
Q  588 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 652  Q
    |||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||    
T  857 agttaactgccgaggatcttcctctacaaatctggcagaagctctcttatccattattcatctca 921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 575
Target Start/End: Original strand, 817 - 870
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||| | |||| ||||||||  ||||||||||||||||||||||||||||||    
T  817 cttcggtaattaactgccgaagaattagaaatccggctgcagttaactgccgag 870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 520 - 644
Target Start/End: Complemental strand, 36615 - 36486
Alignment:
Q  520 ttcttcggcagttaaatgccgaagtttt-agaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgaggatcttctg--ctac-a 615  Q
    ||||||||||||||| ||||||| |||| | ||||||||||||| |||||||||||| || || || | ||||||||||||||||||| |||  |||| |    
T  36615 ttcttcggcagttaactgccgaaattttgaaaaatccggctgcaattaactgccgaggaaaacctcggtagttaactgccgaggatctcctgccctacaa 36516  T
Q  616 aatctggcagaagct-ctctcatccattat 644  Q
    |||||||||||| || ||||||||||||||    
T  36515 aatctggcagaatctcctctcatccattat 36486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 603
Target Start/End: Complemental strand, 41078 - 41019
Alignment:
Q  544 ttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||| || ||||| |||||||||||||||| || || || ||||||||||||||||||    
T  41078 ttttaggaaaccggcggcagttaactgccgaggaaaacctcgggagttaactgccgagga 41019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 494 - 601
Target Start/End: Complemental strand, 15728 - 15621
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaa 593  Q
    ||||||||||||| ||||   |||||| ||||||||||||| || ||||||||||| || ||||| |||||||||||||||| || || |  | ||||||    
T  15728 tgccacacgagtactttacgaaaatgtccttcggcagttaactgtcgaagttttagtaaaccggcggcagttaactgccgaggaaaaccttggtagttaa 15629  T
Q  594 ctgccgag 601  Q
    ||||||||    
T  15628 ctgccgag 15621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 498 - 579
Target Start/End: Complemental strand, 1715 - 1634
Alignment:
Q  498 acacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaat 579  Q
    ||||||||||||||| ||||| |  |||||||||||| ||  |||||||||||||  ||| |||||||||||||||||||||    
T  1715 acacgagtaatttatttaaatatctttcggcagttaactgttgaagttttagaaaatcggttgcagttaactgccgagaaat 1634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 50008 - 50123
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaag-ttttagaaatccggctgcagttaactgccgagaaatacttcagg 587  Q
    |||| |||||||||||||| |||   ||||| || ||| |||||||||||||||| ||||||  | ||||| |||||||||||||||| || || || |     
T  50008 ggctgtgccacacgagtaaattactcaaatgctcctcgacagttaaatgccgaagtttttagggaaccggcggcagttaactgccgaggaaaacctcggt 50107  T
Q  588 agttaactgccgagga 603  Q
    ||||||||||||||||    
T  50108 agttaactgccgagga 50123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 12349 - 12458
Alignment:
Q  494 tgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaa 593  Q
    ||||||||||||| ||||   |||||  ||||||||||||| || |||| |||||| || ||||| ||| |||||||||||| || || || ||||||||    
T  12349 tgccacacgagtactttacaaaaatgcccttcggcagttaactgtcgaaattttagtaaaccggcggcaattaactgccgaggaaaacctcgggagttaa 12448  T
Q  594 ctgccgagga 603  Q
    || |||||||    
T  12449 ctcccgagga 12458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 510 - 431
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| ||||||||  |||  |||||||||||||||||||| |||| || || || |||||||||| |||||||    
T  510 tcggcagttaactgccgaagaattaataatccggctgcagttaactgtcgaggaaaacctcgggagttaactaccgagga 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 17427 - 17348
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| |  || ||||||||||||||||||||||||||| ||  | || | ||||||||||||||||    
T  17427 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgagga 17348  T

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Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 522 - 601
Target Start/End: Complemental strand, 18371 - 18292
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||| |||| |||  || || || | ||||||||||||||    
T  18371 cttcggcggttaactgccgaagttttagaaatccgactgcagtttactgtcgaagaaaacctcggtagttaactgccgag 18292  T

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Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 522 - 601
Target Start/End: Original strand, 54473 - 54552
Alignment:
Q  522 cttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgag 601  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||| |||| |||  || || || | ||||||||||||||    
T  54473 cttcggcggttaactgccgaagttttagaaatccgactgcagtttactgtcgaagaaaacctcggtagttaactgccgag 54552  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 69297 - 69218
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||||||||||||||| ||| |||||||||||| |||  || ||||| | ||| |||| |||||||    
T  69297 tcggcagttaactgccgaagttttagaaatacggatgcagttaactgtcgaagaaaacttcggcagtaaactaccgagga 69218  T

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Target: scaffold0494 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 489 - 547
Target Start/End: Complemental strand, 11565 - 11507
Alignment:
Q  489 ggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagtttt 547  Q
    |||| |||||||||||||| ||| |||||||  ||||||||||||| ||||||||||||    
T  11565 ggctgtgccacacgagtaaattacctaaatgcccttcggcagttaactgccgaagtttt 11507  T

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Target: scaffold0494; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 603
Target Start/End: Original strand, 5327 - 5407
Alignment:
Q  524 tcggcagttaaatgccgaagtttta-gaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| ||||||||||| | | || ||||| |||||||||||||||| || || || | ||||||||||||||||    
T  5327 tcggcagttaactgccgaagtttgaaggaaaccggcggcagttaactgccgaggaaaacctcggtagttaactgccgagga 5407  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 485 - 575
Target Start/End: Complemental strand, 236375 - 236285
Alignment:
Q  485 ataaggctttgccacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgag 575  Q
    |||||||| ||||||||||||| ||||   |||||  ||||||| ||||| |||||||||||||| || | ||| ||||| ||||||||||    
T  236375 ataaggctgtgccacacgagtactttacgaaaatgcccttcggcggttaactgccgaagttttagtaaactggcggcagtaaactgccgag 236285  T

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Target: scaffold0268 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 572
Target Start/End: Complemental strand, 15489 - 15441
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgcc 572  Q
    ||||||||||| ||| ||||| ||||||||||||| |||||||||||||    
T  15489 tcggcagttaactgctgaagtattagaaatccggcggcagttaactgcc 15441  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 603
Target Start/End: Original strand, 65314 - 65394
Alignment:
Q  523 ttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||| ||||||| ||| | | |  |||||||||||||||| |||| || ||||| | ||||||||||||||||    
T  65314 ttcggcagttaactgccgaaatttaaaagaatcggctgcagttaactgtcgaggaaaacttcggcagttaactgccgagga 65394  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 603
Target Start/End: Complemental strand, 16031 - 15952
Alignment:
Q  524 tcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    ||||||||||| |||||| |  || ||||||| ||||||||||||||||||| || || || | |||||||| |||||||    
T  16031 tcggcagttaactgccgaggaatttgaaatccagctgcagttaactgccgaggaaaacctcggtagttaacttccgagga 15952  T

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Target: scaffold0181 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 608 - 642
Target Start/End: Original strand, 21171 - 21205
Alignment:
Q  608 ctgctacaaatctggcagaagctctctcatccatt 642  Q
    ||||||||||||| |||||||||||||||||||||    
T  21171 ctgctacaaatcttgcagaagctctctcatccatt 21205  T

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Target: scaffold0219 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 511
Target Start/End: Complemental strand, 20252 - 20203
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaattta 511  Q
    |||||||||||||  ||||||||||||||||  | |||||||||||||||    
T  20252 gagaattgatgtttacacattgcataaggctgagacacacgagtaattta 20203  T

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Target: scaffold0169 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 511
Target Start/End: Complemental strand, 1784 - 1735
Alignment:
Q  462 gagaattgatgttctcacattgcataaggctttgccacacgagtaattta 511  Q
    |||||||||||||  ||||||||||||||||  | |||||||||||||||    
T  1784 gagaattgatgttgacacattgcataaggctgaggcacacgagtaattta 1735  T

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Target: scaffold0388 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 555 - 603
Target Start/End: Complemental strand, 13954 - 13906
Alignment:
Q  555 cggctgcagttaactgccgagaaatacttcaggagttaactgccgagga 603  Q
    |||||||||||||||||||||||| || || | |||||||| |||||||    
T  13954 cggctgcagttaactgccgagaaaaacatcggcagttaactaccgagga 13906  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 497 - 584
Target Start/End: Complemental strand, 134414 - 134330
Alignment:
Q  497 cacacgagtaatttatctaaatgttcttcggcagttaaatgccgaagttttagaaatccggctgcagttaactgccgagaaatacttc 584  Q
    ||||| ||||||||| | ||||| || ||||||||||| ||||||| || |||||  |||||||||||||||| ||||| || |||||    
T  134414 cacactagtaatttaccgaaatgctcctcggcagttaactgccgaa-ttatagaa--ccggctgcagttaactaccgaggaaaacttc 134330  T

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