View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0498_high_4 (Length: 491)

Name: NF0498_high_4
Description: NF0498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0498_high_4
NF0498_high_4
[»] chr4 (68 HSPs)
chr4 (110-420)||(10246245-10246556)
chr4 (202-301)||(25483326-25483425)
chr4 (182-301)||(52884858-52884976)
chr4 (190-301)||(39404376-39404487)
chr4 (182-293)||(49076523-49076634)
chr4 (182-289)||(3244530-3244634)
chr4 (202-301)||(4955384-4955483)
chr4 (209-301)||(54017662-54017754)
chr4 (202-301)||(10245910-10246008)
chr4 (208-301)||(2740696-2740789)
chr4 (182-287)||(3341098-3341203)
chr4 (212-301)||(41370357-41370446)
chr4 (110-170)||(10246179-10246239)
chr4 (182-290)||(44620630-44620738)
chr4 (202-301)||(1731714-1731813)
chr4 (202-301)||(22183331-22183430)
chr4 (202-293)||(50002416-50002507)
chr4 (182-301)||(54108888-54109002)
chr4 (200-301)||(36572007-36572108)
chr4 (190-290)||(43174484-43174585)
chr4 (182-278)||(45489421-45489518)
chr4 (208-301)||(52884691-52884784)
chr4 (212-301)||(55933191-55933280)
chr4 (182-289)||(22028040-22028147)
chr4 (184-301)||(36629212-36629326)
chr4 (215-293)||(50459724-50459802)
chr4 (208-286)||(54741260-54741338)
chr4 (208-301)||(3340803-3340896)
chr4 (182-301)||(20826190-20826306)
chr4 (212-301)||(49880160-49880249)
chr4 (212-301)||(50630822-50630911)
chr4 (182-278)||(44621396-44621492)
chr4 (202-301)||(34646716-34646815)
chr4 (202-293)||(36608736-36608827)
chr4 (210-301)||(49302902-49302995)
chr4 (182-301)||(2741044-2741160)
chr4 (212-293)||(6975531-6975612)
chr4 (213-290)||(16889614-16889691)
chr4 (208-301)||(20825832-20825925)
chr4 (208-289)||(41707543-41707624)
chr4 (202-280)||(4390189-4390267)
chr4 (192-289)||(16888895-16888993)
chr4 (208-273)||(3700361-3700426)
chr4 (208-289)||(34004663-34004743)
chr4 (208-301)||(39404014-39404107)
chr4 (208-301)||(49076898-49076990)
chr4 (202-286)||(54017784-54017870)
chr4 (202-301)||(54936190-54936285)
chr4 (212-301)||(32941190-32941279)
chr4 (194-278)||(44620926-44621011)
chr4 (222-283)||(54343086-54343147)
chr4 (237-301)||(18932816-18932880)
chr4 (221-301)||(44620362-44620442)
chr4 (208-260)||(45050597-45050649)
chr4 (203-289)||(51768139-51768225)
chr4 (200-302)||(22028435-22028539)
chr4 (208-301)||(39792927-39793020)
chr4 (212-288)||(54108538-54108612)
chr4 (202-278)||(44620286-44620362)
chr4 (212-263)||(50788088-50788139)
chr4 (227-289)||(45496820-45496882)
chr4 (202-263)||(19504695-19504756)
chr4 (208-289)||(28034225-28034306)
chr4 (237-289)||(44621027-44621079)
chr4 (218-290)||(45489792-45489864)
chr4 (235-288)||(39699026-39699079)
chr4 (217-301)||(760194-760278)
chr4 (202-286)||(11348410-11348494)
[»] scaffold0734 (2 HSPs)
scaffold0734 (182-301)||(5747-5866)
scaffold0734 (202-289)||(5386-5473)
[»] chr7 (48 HSPs)
chr7 (182-301)||(7553995-7554114)
chr7 (191-301)||(22566731-22566841)
chr7 (183-301)||(30244241-30244359)
chr7 (202-301)||(7517570-7517669)
chr7 (182-301)||(37533079-37533196)
chr7 (190-301)||(30245055-30245166)
chr7 (182-285)||(30255309-30255412)
chr7 (200-301)||(1085685-1085786)
chr7 (182-282)||(30244671-30244771)
chr7 (202-293)||(40094851-40094942)
chr7 (201-293)||(47129084-47129176)
chr7 (202-301)||(16569186-16569285)
chr7 (202-301)||(16596377-16596476)
chr7 (202-301)||(24177425-24177524)
chr7 (190-285)||(30245472-30245567)
chr7 (208-301)||(40230360-40230453)
chr7 (208-300)||(28301613-28301705)
chr7 (202-301)||(22567108-22567206)
chr7 (210-301)||(36939802-36939893)
chr7 (202-293)||(41910671-41910762)
chr7 (195-289)||(45434619-45434713)
chr7 (208-301)||(8128510-8128603)
chr7 (203-280)||(36109007-36109084)
chr7 (182-293)||(14681482-14681591)
chr7 (202-301)||(23446-23545)
chr7 (183-301)||(1085317-1085436)
chr7 (214-301)||(6054562-6054649)
chr7 (202-293)||(34218111-34218202)
chr7 (202-301)||(45754706-45754804)
chr7 (212-301)||(29157565-29157654)
chr7 (208-301)||(36622956-36623049)
chr7 (202-301)||(45433231-45433330)
chr7 (219-301)||(11845198-11845280)
chr7 (202-290)||(36534864-36534952)
chr7 (202-293)||(118378-118469)
chr7 (202-289)||(43241485-43241572)
chr7 (202-291)||(24838780-24838870)
chr7 (220-301)||(19122740-19122820)
chr7 (217-301)||(30032572-30032656)
chr7 (217-300)||(44361534-44361616)
chr7 (215-289)||(9901648-9901720)
chr7 (215-301)||(37533433-37533519)
chr7 (208-262)||(40094502-40094556)
chr7 (202-255)||(36967344-36967397)
chr7 (208-272)||(41854631-41854694)
chr7 (215-301)||(20599317-20599403)
chr7 (133-179)||(37533213-37533259)
chr7 (185-229)||(48243218-48243262)
[»] chr1 (58 HSPs)
chr1 (182-301)||(34364895-34365014)
chr1 (182-301)||(44290527-44290644)
chr1 (182-301)||(37556081-37556200)
chr1 (182-301)||(26661591-26661710)
chr1 (182-301)||(22077564-22077680)
chr1 (182-299)||(41157345-41157462)
chr1 (201-301)||(34364496-34364596)
chr1 (202-301)||(41184494-41184593)
chr1 (182-291)||(3537226-3537333)
chr1 (208-301)||(17294573-17294666)
chr1 (212-301)||(44290894-44290983)
chr1 (183-290)||(11977251-11977358)
chr1 (210-301)||(41142370-41142461)
chr1 (208-298)||(22077900-22077990)
chr1 (202-294)||(21378117-21378209)
chr1 (202-289)||(41156981-41157068)
chr1 (215-290)||(50052103-50052178)
chr1 (213-301)||(3550721-3550809)
chr1 (202-301)||(26661967-26662066)
chr1 (202-301)||(29798189-29798288)
chr1 (208-287)||(45084378-45084457)
chr1 (208-301)||(3875400-3875493)
chr1 (212-301)||(5320034-5320123)
chr1 (202-290)||(31767241-31767329)
chr1 (202-290)||(37850680-37850768)
chr1 (182-301)||(48588557-48588674)
chr1 (182-301)||(66156-66274)
chr1 (222-289)||(5528835-5528902)
chr1 (214-301)||(38804424-38804511)
chr1 (208-289)||(66553-66634)
chr1 (208-289)||(24600395-24600476)
chr1 (212-289)||(32594797-32594874)
chr1 (212-301)||(41759483-41759572)
chr1 (214-290)||(34649440-34649516)
chr1 (208-302)||(44685452-44685547)
chr1 (182-301)||(30630707-30630823)
chr1 (203-280)||(40082398-40082475)
chr1 (217-293)||(3537676-3537752)
chr1 (218-301)||(5575110-5575193)
chr1 (201-288)||(39066282-39066369)
chr1 (202-259)||(35154150-35154207)
chr1 (208-289)||(1187445-1187526)
chr1 (220-301)||(14318875-14318956)
chr1 (208-293)||(22793274-22793359)
chr1 (212-301)||(24132054-24132143)
chr1 (110-159)||(26661748-26661797)
chr1 (216-301)||(9955911-9955998)
chr1 (208-278)||(4878799-4878869)
chr1 (239-289)||(4956218-4956268)
chr1 (235-289)||(22077191-22077245)
chr1 (208-289)||(1188669-1188750)
chr1 (212-301)||(45494043-45494137)
chr1 (192-263)||(50469188-50469256)
chr1 (190-244)||(22077248-22077299)
chr1 (215-282)||(37555733-37555800)
chr1 (182-244)||(50051777-50051837)
chr1 (208-301)||(19283524-19283617)
chr1 (249-293)||(44043849-44043893)
[»] scaffold0171 (1 HSPs)
scaffold0171 (182-301)||(17525-17644)
[»] chr6 (39 HSPs)
chr6 (182-301)||(2578512-2578630)
chr6 (182-301)||(16108033-16108152)
chr6 (182-293)||(29518892-29519001)
chr6 (202-301)||(2579941-2580040)
chr6 (182-299)||(3409632-3409747)
chr6 (212-301)||(35210204-35210293)
chr6 (214-301)||(2377756-2377843)
chr6 (195-293)||(2378111-2378207)
chr6 (191-301)||(16454886-16454996)
chr6 (212-293)||(29518503-29518584)
chr6 (212-293)||(32741179-32741260)
chr6 (202-290)||(593789-593877)
chr6 (182-294)||(2579185-2579293)
chr6 (202-301)||(16107668-16107767)
chr6 (212-301)||(3409259-3409348)
chr6 (190-301)||(10074060-10074168)
chr6 (182-301)||(10074432-10074548)
chr6 (212-301)||(26544049-26544138)
chr6 (202-301)||(16454565-16454664)
chr6 (212-301)||(1846748-1846837)
chr6 (212-301)||(3058226-3058315)
chr6 (212-289)||(14748419-14748496)
chr6 (217-301)||(32460649-32460733)
chr6 (218-289)||(9062430-9062501)
chr6 (214-288)||(5832108-5832182)
chr6 (215-288)||(1950267-1950340)
chr6 (216-301)||(3415462-3415547)
chr6 (212-293)||(1127360-1127441)
chr6 (208-289)||(10073697-10073776)
chr6 (212-301)||(10911565-10911655)
chr6 (218-301)||(2843560-2843644)
chr6 (209-289)||(5958684-5958764)
chr6 (215-289)||(6999877-6999951)
chr6 (182-301)||(2579561-2579677)
chr6 (182-301)||(8481898-8482015)
chr6 (185-289)||(2578916-2579016)
chr6 (208-301)||(6071128-6071221)
chr6 (249-290)||(14789284-14789325)
chr6 (237-285)||(35210503-35210551)
[»] chr5 (56 HSPs)
chr5 (182-301)||(26074582-26074701)
chr5 (202-301)||(26075231-26075330)
chr5 (182-290)||(26074862-26074970)
chr5 (202-301)||(15370089-15370188)
chr5 (202-299)||(40296386-40296483)
chr5 (182-299)||(3295086-3295204)
chr5 (182-290)||(13415840-13415947)
chr5 (183-301)||(26074215-26074330)
chr5 (202-301)||(299479-299578)
chr5 (202-301)||(6224186-6224285)
chr5 (218-301)||(41170640-41170723)
chr5 (208-292)||(41632778-41632862)
chr5 (214-301)||(18603189-18603276)
chr5 (202-289)||(36492298-36492385)
chr5 (212-301)||(9498723-9498812)
chr5 (212-301)||(32487394-32487482)
chr5 (182-301)||(6500795-6500911)
chr5 (185-299)||(624171-624283)
chr5 (202-293)||(12662729-12662820)
chr5 (212-301)||(6500451-6500539)
chr5 (212-301)||(27502105-27502194)
chr5 (208-293)||(35150003-35150087)
chr5 (208-301)||(36568636-36568729)
chr5 (202-301)||(11417046-11417143)
chr5 (208-301)||(1028586-1028679)
chr5 (208-301)||(3295413-3295505)
chr5 (202-290)||(25327925-25328013)
chr5 (202-293)||(35914839-35914930)
chr5 (182-301)||(15370384-15370491)
chr5 (182-299)||(31509594-31509710)
chr5 (208-301)||(42508608-42508701)
chr5 (202-290)||(42405676-42405764)
chr5 (182-301)||(24489275-24489389)
chr5 (214-292)||(26074320-26074398)
chr5 (202-288)||(35167920-35168006)
chr5 (212-301)||(623818-623907)
chr5 (217-285)||(38427553-38427620)
chr5 (202-301)||(34753094-34753193)
chr5 (208-294)||(39309680-39309765)
chr5 (214-287)||(7768852-7768925)
chr5 (212-289)||(29549336-29549413)
chr5 (201-254)||(35150736-35150789)
chr5 (201-254)||(35151027-35151080)
chr5 (191-293)||(36522314-36522413)
chr5 (182-247)||(13785732-13785794)
chr5 (202-293)||(41635268-41635359)
chr5 (214-293)||(42524719-42524797)
chr5 (208-278)||(300955-301025)
chr5 (182-301)||(36521965-36522081)
chr5 (212-285)||(5723876-5723949)
chr5 (224-301)||(33747783-33747860)
chr5 (215-289)||(2411010-2411084)
chr5 (111-164)||(795196-795249)
chr5 (215-272)||(6225047-6225104)
chr5 (110-159)||(9498507-9498556)
chr5 (212-288)||(26590992-26591068)
[»] chr8 (67 HSPs)
chr8 (182-301)||(9309325-9309444)
chr8 (182-301)||(30359579-30359698)
chr8 (202-301)||(30359261-30359360)
chr8 (190-301)||(34835187-34835298)
chr8 (182-290)||(8918844-8918952)
chr8 (201-290)||(8794100-8794189)
chr8 (190-298)||(9482676-9482782)
chr8 (208-289)||(45122138-45122219)
chr8 (190-290)||(45122984-45123082)
chr8 (182-301)||(34835444-34835564)
chr8 (182-301)||(34835710-34835830)
chr8 (202-301)||(147441-147540)
chr8 (182-300)||(1013941-1014057)
chr8 (202-301)||(3038359-3038458)
chr8 (182-284)||(18372342-18372442)
chr8 (182-301)||(45121725-45121843)
chr8 (219-301)||(70343-70425)
chr8 (208-301)||(1513984-1514077)
chr8 (182-290)||(3670032-3670138)
chr8 (208-293)||(9608741-9608826)
chr8 (208-293)||(41972154-41972239)
chr8 (214-289)||(25561897-25561972)
chr8 (202-301)||(33113436-33113535)
chr8 (182-263)||(147799-147880)
chr8 (212-301)||(3669687-3669776)
chr8 (212-301)||(5420651-5420740)
chr8 (208-298)||(9308973-9309065)
chr8 (233-293)||(9483264-9483324)
chr8 (182-292)||(40518555-40518662)
chr8 (202-290)||(43274859-43274947)
chr8 (210-301)||(45121979-45122070)
chr8 (210-284)||(18372785-18372859)
chr8 (212-301)||(20870642-20870733)
chr8 (201-301)||(34834865-34834965)
chr8 (214-289)||(40579587-40579662)
chr8 (219-290)||(41416251-41416322)
chr8 (201-286)||(6876946-6877032)
chr8 (212-289)||(1014326-1014403)
chr8 (212-301)||(30441081-30441174)
chr8 (182-293)||(18371737-18371842)
chr8 (182-289)||(18373012-18373118)
chr8 (217-300)||(20130454-20130536)
chr8 (222-285)||(25561729-25561792)
chr8 (214-293)||(37544567-37544646)
chr8 (215-301)||(32640601-32640682)
chr8 (249-302)||(9609122-9609175)
chr8 (208-301)||(9620745-9620838)
chr8 (182-261)||(6731876-6731953)
chr8 (237-289)||(45122649-45122701)
chr8 (182-256)||(18372485-18372557)
chr8 (214-293)||(18372680-18372758)
chr8 (110-159)||(3669945-3669994)
chr8 (208-289)||(4154747-4154828)
chr8 (216-292)||(18380095-18380171)
chr8 (208-301)||(40518065-40518160)
chr8 (216-280)||(43398161-43398225)
chr8 (208-263)||(20995508-20995563)
chr8 (238-293)||(32305503-32305558)
chr8 (219-261)||(6651510-6651552)
chr8 (215-293)||(3037785-3037865)
chr8 (182-303)||(4154348-4154467)
chr8 (208-293)||(9507773-9507863)
chr8 (208-244)||(18645713-18645749)
chr8 (242-289)||(18372075-18372122)
chr8 (110-159)||(1014095-1014144)
chr8 (208-273)||(12283869-12283934)
chr8 (182-235)||(43274702-43274755)
[»] chr3 (57 HSPs)
chr3 (110-301)||(4823541-4823744)
chr3 (182-301)||(15773162-15773281)
chr3 (182-290)||(54017896-54018004)
chr3 (182-301)||(22304541-22304658)
chr3 (202-286)||(31190007-31190091)
chr3 (202-293)||(29644979-29645070)
chr3 (182-301)||(37990708-37990827)
chr3 (195-293)||(29644658-29644756)
chr3 (208-301)||(35946518-35946611)
chr3 (209-289)||(15772851-15772931)
chr3 (201-301)||(37991046-37991146)
chr3 (202-289)||(25739506-25739593)
chr3 (202-293)||(42342465-42342556)
chr3 (202-301)||(49336756-49336855)
chr3 (182-301)||(41359834-41359949)
chr3 (208-289)||(8327900-8327981)
chr3 (182-301)||(21832412-21832528)
chr3 (182-290)||(32462638-32462747)
chr3 (208-293)||(33803329-33803414)
chr3 (202-303)||(39914242-39914343)
chr3 (212-289)||(51886561-51886638)
chr3 (201-293)||(25755383-25755475)
chr3 (201-301)||(43346860-43346960)
chr3 (122-301)||(11661846-11662040)
chr3 (202-293)||(12114639-12114730)
chr3 (182-301)||(42342159-42342278)
chr3 (202-301)||(52634666-52634764)
chr3 (221-301)||(39935024-39935104)
chr3 (210-290)||(54018278-54018358)
chr3 (202-301)||(32589694-32589792)
chr3 (202-301)||(53118044-53118142)
chr3 (202-289)||(53577354-53577441)
chr3 (182-263)||(22304218-22304297)
chr3 (201-301)||(32462969-32463070)
chr3 (212-293)||(39389070-39389151)
chr3 (201-301)||(45901702-45901803)
chr3 (202-293)||(1634391-1634483)
chr3 (212-288)||(50612534-50612610)
chr3 (208-287)||(33175747-33175826)
chr3 (208-302)||(45395721-45395815)
chr3 (182-293)||(9240122-9240230)
chr3 (202-279)||(11661525-11661602)
chr3 (182-301)||(22304024-22304136)
chr3 (212-285)||(37726504-37726577)
chr3 (202-268)||(43346640-43346706)
chr3 (219-292)||(3135151-3135224)
chr3 (212-293)||(44160621-44160702)
chr3 (222-290)||(42584902-42584970)
chr3 (215-293)||(33362370-33362451)
chr3 (110-179)||(22303783-22303853)
chr3 (208-293)||(7767391-7767476)
chr3 (202-269)||(3135562-3135629)
chr3 (208-289)||(39336310-39336391)
chr3 (208-301)||(47964984-47965077)
chr3 (209-289)||(3384347-3384427)
chr3 (208-301)||(47964587-47964680)
chr3 (208-244)||(12747878-12747914)
[»] chr2 (60 HSPs)
chr2 (182-301)||(15880233-15880352)
chr2 (182-293)||(37106160-37106269)
chr2 (182-290)||(38796298-38796406)
chr2 (182-301)||(5542694-5542811)
chr2 (190-301)||(31468819-31468926)
chr2 (212-301)||(36178674-36178763)
chr2 (182-287)||(7598581-7598684)
chr2 (212-301)||(14745736-14745825)
chr2 (182-301)||(28531383-28531499)
chr2 (182-301)||(40679698-40679814)
chr2 (212-301)||(41283544-41283633)
chr2 (182-301)||(29676873-29676997)
chr2 (182-290)||(40733487-40733595)
chr2 (209-296)||(1769889-1769976)
chr2 (196-299)||(6421369-6421472)
chr2 (202-301)||(28254306-28254405)
chr2 (182-269)||(36785664-36785751)
chr2 (200-290)||(6712964-6713054)
chr2 (212-293)||(962598-962679)
chr2 (202-290)||(38796700-38796788)
chr2 (202-300)||(31899496-31899594)
chr2 (208-294)||(37632673-37632759)
chr2 (212-301)||(5543067-5543156)
chr2 (208-301)||(35580793-35580885)
chr2 (212-301)||(37105924-37106013)
chr2 (182-279)||(40733853-40733950)
chr2 (212-301)||(42514649-42514738)
chr2 (202-293)||(15511572-15511661)
chr2 (201-301)||(16542438-16542538)
chr2 (217-301)||(33731653-33731737)
chr2 (182-293)||(36178346-36178455)
chr2 (196-301)||(14745363-14745466)
chr2 (202-301)||(36005949-36006047)
chr2 (202-290)||(31259696-31259787)
chr2 (197-260)||(6421289-6421352)
chr2 (220-299)||(29676543-29676622)
chr2 (182-301)||(30313149-30313266)
chr2 (182-247)||(3673055-3673120)
chr2 (208-301)||(5367451-5367544)
chr2 (228-301)||(6422126-6422199)
chr2 (208-301)||(9231245-9231338)
chr2 (209-301)||(7598225-7598317)
chr2 (208-301)||(23346231-23346325)
chr2 (237-301)||(36178240-36178304)
chr2 (182-301)||(30323435-30323553)
chr2 (203-301)||(12529097-12529195)
chr2 (205-301)||(29874092-29874188)
chr2 (182-301)||(29873606-29873724)
chr2 (223-290)||(40163453-40163520)
chr2 (228-289)||(28254193-28254254)
chr2 (208-289)||(33561532-33561613)
chr2 (191-290)||(33953851-33953947)
chr2 (182-290)||(41678447-41678554)
chr2 (208-301)||(16590884-16590972)
chr2 (185-232)||(40734251-40734298)
chr2 (110-168)||(29676787-29676844)
chr2 (110-159)||(14745517-14745566)
chr2 (208-301)||(37894761-37894854)
chr2 (208-301)||(37895130-37895223)
chr2 (213-301)||(31385738-31385826)
[»] scaffold0078 (2 HSPs)
scaffold0078 (182-301)||(5327-5446)
scaffold0078 (202-300)||(4972-5070)
[»] scaffold0391 (3 HSPs)
scaffold0391 (182-301)||(1175-1294)
scaffold0391 (182-264)||(3091-3173)
scaffold0391 (259-301)||(1760-1802)
[»] scaffold0702 (2 HSPs)
scaffold0702 (214-301)||(583-670)
scaffold0702 (195-282)||(230-315)
[»] scaffold0504 (1 HSPs)
scaffold0504 (214-289)||(10192-10267)
[»] scaffold0027 (1 HSPs)
scaffold0027 (202-301)||(47350-47449)


Alignment Details
Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 110 - 420
Target Start/End: Original strand, 10246245 - 10246556
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccactctaggggagcgactcacgcttgagggggagtgttgctg 209  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  10246245 acaagcaacaagtggcttcttgtgcagcaatggctatacatgcaaagtaaaaagcttccactctaggggagcgactcacgcttgagggggagtgctgttg 10246344  T
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaatactgtcc 309  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10246345 tgtgcaagtgtctgttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaatactgtcc 10246444  T
Q  310 tttttgcaaatttag-ccccccgaaaccaattttgaccaattcaaccatgaagtggatgtcacgtgtgtaatgctttaattattttagttttagatagat 408  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10246445 tttttgcatatttagcccccccgaaaccaattttaaccaattcaacgatgacgtggatgtcacgtgtgtaatgctttaattattttagttttagatagat 10246544  T
Q  409 acagagagagag 420  Q
    ||||||||||||    
T  10246545 acagagagagag 10246556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 25483326 - 25483425
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| |||||||    
T  25483326 tgttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagaggatccataaacccattgccttaa 25483425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 52884858 - 52884976
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||     
T  52884858 gactcacacttgagggg-agtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggat 52884956  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||||||| |||||||    
T  52884957 ccataaacccattgccttaa 52884976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 39404376 - 39404487
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||| || ||| ||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  39404376 cttgaggaggagtgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagaggacccataaac 39404475  T
Q  290 ccatagccttaa 301  Q
    | ||||||||||    
T  39404476 ctatagccttaa 39404487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 49076634 - 49076523
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||||  || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  49076634 gactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacaccttataagtaagaggac 49076535  T
Q  282 ccataaacccat 293  Q
    | ||||||||||    
T  49076534 ctataaacccat 49076523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 3244634 - 3244530
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||||||| |||| ||||||||   |||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||| |||||||    
T  3244634 gactcacgcttaagggagagtgttg---tgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagaggac 3244538  T
Q  282 ccataaac 289  Q
    ||||||||    
T  3244537 ccataaac 3244530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 4955483 - 4955384
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||| ||||||| ||||||||||| |||||||    
T  4955483 tgttgttgtgtgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagaggactcataaacccattgccttaa 4955384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 54017754 - 54017662
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||||||||| ||  || ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  54017754 gtgtgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaa 54017662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 10245910 - 10246008
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||||||||||||| | || ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||||    
T  10245910 tgttgttgtgtgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaagagga-ccataaacccaaagccttaa 10246008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 2740696 - 2740789
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||| |||||||| ||||||||| ||||||||    
T  2740696 tgtgtgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctataaacccagagccttaa 2740789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 3341098 - 3341203
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||  |||||||| ||||||||||||||||||||||||| || || ||||||||||||||||||| ||||  |||||||| |||||||    
T  3341098 gactcacacttgaggcagagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactttataagtaagaggac 3341197  T
Q  282 ccataa 287  Q
    ||||||    
T  3341198 ccataa 3341203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 41370357 - 41370446
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||| | ||||||||| ||||||||||||||||||| |||||||    
T  41370357 tgcaagtgtgagttatatgtcccaaatcggataaaatagtaaatgttgaaaaccttataagtaagaggacccataaacccattgccttaa 41370446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 10246179 - 10246239
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccac 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10246179 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccac 10246239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 44620630 - 44620738
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||| ||||||| | ||||||||||||||||||||||||| || ||||||| ||| |||| ||||||||||  |||||||| |||||||    
T  44620630 gactcacacttgaggtggagtgtcgttgtgtgcaagtgtgagttatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagaggac 44620729  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  44620730 ccataaacc 44620738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 1731813 - 1731714
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||| ||||||||||||||| || ||| ||||||| ||||||||||||||||||||||| | |||||||||||||||| || |||||||    
T  1731813 tgttgttgtgtgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaaccaattgccttaa 1731714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 22183430 - 22183331
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| |||||||||||||||||||||| || || |||||||||||||||||| ||||||||  |||||||| | ||||||||||||||||| |||||||    
T  22183430 tgttgttgtgtgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaacccattgccttaa 22183331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 50002416 - 50002507
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  || ||||| |||||||||||||| ||||    
T  50002416 tgttgttgtttgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccat 50002507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 54108888 - 54109002
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| |||||||||||||   ||||||||||| ||||||  ||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  54108888 gactcacacttaagggggagtgttg---tgtgcaagtgtcagttat--gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 54108982  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||||||| |||||||    
T  54108983 ccataaacccattgccttaa 54109002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 36572007 - 36572108
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctt 299  Q
    ||||||| ||||| ||||||||||||||||||| || |||| ||||||||||||| |||||||| ||||||||| ||| |||||||||| |||| |||||    
T  36572007 agtgttgttgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaatccattgcctt 36572106  T
Q  300 aa 301  Q
    ||    
T  36572107 aa 36572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 190 - 290
Target Start/End: Original strand, 43174484 - 43174585
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaa-gagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||||||| ||||| ||||||||||||||||| | || ||| ||||||| |||||||||||||||| ||||||||| ||||||| ||||||    
T  43174484 cttgagggggagtgttgttgtgtacaagtgtgagttatatgccacacatcagataaaaagagtaaaggttgaacaccttataagtaagaggacacataaa 43174583  T
Q  289 cc 290  Q
    ||    
T  43174584 cc 43174585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 45489518 - 45489421
Alignment:
Q  182 gactcacgcttgaggggg-agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||||| |||||||||| ||||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| | ||||||| ||||    
T  45489518 gactcacacttgaggggggagtgttgttgtgtacaagtgtgaattatatgtctcacatcggataaaagagtaaaggttgaacaccatataagtaagag 45489421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 52884691 - 52884784
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||| || | |||||||||| |||||||    
T  52884691 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagatgatcgataaacccattgccttaa 52884784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 55933280 - 55933191
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||||||  | ||||||||||| ||||| ||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  55933280 tgcaagtgtgagttatatgtcctacatcggataaaatagtaagggttgaacaccttataagtaagaggacccataaacccattgccttaa 55933191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 22028147 - 22028040
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||| || |||||| ||||||||||||||| ||||||||| || ||||||||||| |  |||||||||||| ||||||||| |||||||    
T  22028147 gactcacacttaaggaggggtgttgttgtgtgcaagtgtgacttatatgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagaggac 22028048  T
Q  282 ccataaac 289  Q
    ||||||||    
T  22028047 ccataaac 22028040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 36629212 - 36629326
Alignment:
Q  184 ctcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccc 283  Q
    ||||| |||||||||||||||||   ||| ||||||||||||||||||| || |||||||| || |||||| ||| |||| ||||||||| |||||||||    
T  36629212 ctcacacttgagggggagtgttg---tgttcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaagaggaccc 36629308  T
Q  284 ataaacccatagccttaa 301  Q
    |||||| ||| |||||||    
T  36629309 ataaactcattgccttaa 36629326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 50459724 - 50459802
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||  || ||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  50459724 aagtgtgagttatatgttccacatcggttaaaagagtaaaggttgaacatcttataagtaagaggactcataaacccat 50459802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 54741338 - 54741260
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    ||||||||||||||| |||||||||||| |||||||| || ||||||||||||||| ||||||||| ||||||||||||    
T  54741338 tgtgtgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccata 54741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 3340803 - 3340896
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||||| |  ||| ||| |||||||||||||||| || ||||||||| ||||||||||||||||||  |||||||    
T  3340803 tgtgtgcaagtgtgagttatatgtcccgcatcagatgaaagagtaaaggttgagcaccttataagtaagaggacccataaacccactgccttaa 3340896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 20826190 - 20826306
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||    |||  || ||||||||||||||| || ||||||||||| |||||| ||||||||  |||||||| |||| ||    
T  20826190 gactcacacttgagggggagtgtta---tgtagaaatgtgagttatatgtcccacatcggataaaatagtaaaagttgaacacgttataagtaagagaac 20826286  T
Q  282 ccataaacccatagccttaa 301  Q
    ||||||||||||||||||||    
T  20826287 ccataaacccatagccttaa 20826306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 49880160 - 49880249
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || || | |||||| ||||||||||||||| ||||||||| ||||||||||||||||||  |||||||    
T  49880160 tgcaagtgtgagttatatgtcccacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccactgccttaa 49880249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 50630911 - 50630822
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||| ||||||||||||||  | ||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||| |||||||    
T  50630911 tgcaagcgtgagttatatgtcctacatcggataaaatagtaaaggttgaacacattataagtaagaggacccataaacccattgccttaa 50630822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 44621396 - 44621492
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||||||  | || |||||||| |||||||||| |||| ||||||||| ||||    
T  44621396 gactcacacttgagggggagtgtcgttgtgtgcaagtgtgagttatatgtccaacatgggataaaacagtaaaggttaaacaccttataagtaagag 44621492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 34646815 - 34646716
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||| |||||||| ||||||| | ||||||| ||||||| ||| |||||||    
T  34646815 tgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaactcattgccttaa 34646716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 36608827 - 36608736
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||||||||||||||||  | |||||||||||||||||| |||||||| || |||||| |||||| ||||||| ||||    
T  36608827 tgttgttgtgtgcaagtgtgagttatatgtccaacatcggataaaagagtaaaagttgaacacctcataagtaagaggatccataaatccat 36608736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 301
Target Start/End: Original strand, 49302902 - 49302995
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttat--aagttagaggacccataaacccatagccttaa 301  Q
    |||| |||||||||||||||||| || |||  |||||| |||||||||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  49302902 tgtgtaagtgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaacatcttataaaagtaagaggacccataaacccattgccttaa 49302995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 2741044 - 2741160
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||| ||||||||||    ||||||||||||||||||||||| || ||| |||| || ||||||||||||| | ||||||||| |||||||    
T  2741044 gactcacacttgaaggggagtgtta---tgtgcaagtgtgagttatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagaggac 2741140  T
Q  282 ccataaacccatagccttaa 301  Q
    ||||||  |||| |||||||    
T  2741141 ccataactccattgccttaa 2741160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 6975612 - 6975531
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||| ||||||| |||||| ||||    
T  6975612 tgcaaatgtgagttatatgtctcacatccgataaaatagtaaaggttgaatatcttataagtaagaggactcataaatccat 6975531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 16889691 - 16889614
Alignment:
Q  213 gcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| | ||||||||| ||||||  ||||||||    
T  16889691 gcaagtgtgagttatatgtctcaaatcggatagaaaagtaaaggttgaataccttataagtaagaggattcataaacc 16889614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 20825832 - 20825925
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||| ||||||||||||||  || ||||||||||||||||||||||||||| ||||||| | |||| |||||||||||  |||||||||    
T  20825832 tgtgtacaaatgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataaataagagcacccataaacctttagccttaa 20825925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 41707624 - 41707543
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||| | || ||||||||||    
T  41707624 tgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccatataagtaaaagaacccataaac 41707543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 4390267 - 4390189
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||| ||||||||||||||||||| || || || ||| ||||||||||||||||||||||| ||||||||| ||||||    
T  4390267 tgttgttgtgtgcaagtgtgagttacatatcccacatcagataaaagagtaaaggttgaacaccttataagtaagagga 4390189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 16888993 - 16888895
Alignment:
Q  192 tgagggggagtgttgctgtgtg-caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||| ||||||| |||||| ||||||||||||||||||| || |||||||| || ||||||||||||| | ||||||||| |||| ||| ||||||    
T  16888993 tgaggggaagtgttgttgtgtggcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaacctataaac 16888895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 3700361 - 3700426
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagt 273  Q
    |||||||||||||||||||||||||  | |||||||||||||||||| |||||||| |||||||||    
T  3700361 tgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagt 3700426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 34004743 - 34004663
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || ||  ||||||| | ||||||||||||| ||||||||| |||||||||||||||    
T  34004743 tgtgtgcaagtgtgagttatatgtcacacatatgataaaa-actaaaggttgaacaacttataagtaagaggacccataaac 34004663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 39404014 - 39404107
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| |||||||||||||||||||  | || | ||||||||||||||||||||||  |||||||| ||||||| ||||||| |||||| ||||    
T  39404014 tgtgtacaagtgtgagttatatgtcctacattgaataaaagagtaaaggttgaacactttataagtaagaggactcataaactcatagcattaa 39404107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 49076990 - 49076898
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||||  || || || ||||| ||||||||||||||| ||||| ||| |||| ||||||||||||||| ||||||    
T  49076990 tgtgtgcaagtgtgagttatatgttccatattggctaaaatagtaaaggttgaacaccttat-agtaagagaacccataaacccataaccttaa 49076898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 54017870 - 54017784
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctc--aaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    ||||| ||||||||| |||||||||||| | ||  | ||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  54017870 tgttgttgtgtgcaaatgtgagttatatatatcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccata 54017784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 54936190 - 54936285
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| ||||||||||||||    | || ||| ||||||| ||||||||||||||| ||| ||||| ||||||||||||||||||| |||||||    
T  54936190 tgttgttgtgtacaagtgtgagttat----cccacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccattgccttaa 54936285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 32941279 - 32941190
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||||||| | |||||| | || ||||||||||||||| ||||||| | ||||| | ||||||| ||| |||||||    
T  32941279 tgcaagtgtgagttatatgtcttacatcggaaagaacagtaaaggttgaacaccttataaataagagggctcataaactcattgccttaa 32941190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 44620926 - 44621011
Alignment:
Q  194 agggggagtgttgctgtgtgcaagtgtgagttatatgtctcaa-atcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||||||||||| ||||  ||||||||||||| ||||| ||| |||||||||||  |||||||||||||| ||||||||| ||||    
T  44620926 agggggagtgttgttgtggacaagtgtgagttagatgtcccaacatcggataaaactgtaaaggttgaacaccttataagtaagag 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 54343147 - 54343086
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccc 283  Q
    ||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  54343147 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccc 54343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 18932880 - 18932816
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||| ||||||||||||| | ||||||| | ||||||||||||||||||| |||||||    
T  18932880 atcggataaaatagtaaaggttgaataccttataaataagaggacccataaacccattgccttaa 18932816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 221 - 301
Target Start/End: Original strand, 44620362 - 44620442
Alignment:
Q  221 gagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||  || ||||||||||| ||||||||||||||| ||||||| | ||||  ||||||||||||| |||||||    
T  44620362 gagttatatgttccacatcggataaaacagtaaaggttgaacaccttataaataagagagcccataaacccattgccttaa 44620442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 45050597 - 45050649
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttga 260  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  45050597 tgtgtgcaagtgtgagttatatgtctcacatcaaataaaagagtaaaggttga 45050649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 51768225 - 51768139
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||| ||||||||| |||||||||||||||  | |||| ||| ||||||||| |||||||| ||||||| | ||||||| |||||||    
T  51768225 gttgttgtgtgcaaatgtgagttatatgtcctatatcgaatataagagtaaatgttgaacaccttataaataagaggactcataaac 51768139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 302
Target Start/End: Complemental strand, 22028539 - 22028435
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagag--taaaggttgaacatcttataagttagaggacccataaacccatagcc 297  Q
    ||||||| ||||||||||||| | |||||||||  | ||||||||||| |   ||||||||||||| ||||| ||| ||||||||||||||| ||| | |    
T  22028539 agtgttgttgtgtgcaagtgttacttatatgtcctacatcggataaaaaaaaataaaggttgaacaccttattagtaagaggacccataaactcattgtc 22028440  T
Q  298 ttaat 302  Q
    |||||    
T  22028439 ttaat 22028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 39793020 - 39792927
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||||||||| || ||| |||| || |||||| |||||||| ||||||||  |||||| || ||||| ||| |||||||    
T  39793020 tgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataagaaagaggaaccgtaaactcattgccttaa 39792927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 54108538 - 54108612
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||||||  ||| || || |||||||| ||||||||||||||| ||||||||| | ||||||||||||    
T  54108538 tgcaagtgtgagttat--gtcccatataggataaaatagtaaaggttgaacaccttataagtaaaaggacccataaa 54108612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 44620286 - 44620362
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||| ||||| ||| | ||||||||||||| || || |||||||| ||||||||||||||| ||||||||| ||||    
T  44620286 tgttgttgtgtacaaatatgagttatatgtcccacatgggataaaatagtaaaggttgaacaccttataagtaagag 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 50788139 - 50788088
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||||| ||||||||||| || ||||||||||| |||||||||||||||    
T  50788139 tgcaagtgtaagttatatgtcccacatcggataaaatagtaaaggttgaaca 50788088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 45496820 - 45496882
Alignment:
Q  227 tatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| || |||||||||||  |||||||||||||| ||||||||| |||||||| ||||||    
T  45496820 tatgtcccacatcggataaaatcgtaaaggttgaacaccttataagtaagaggacctataaac 45496882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 19504695 - 19504756
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||| ||||| ||||| ||||||||||||| || ||||||||||| |||||| ||||||||    
T  19504695 tgttgttgtgtacaagtatgagttatatgtcccatatcggataaaatagtaaaagttgaaca 19504756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 28034225 - 28034306
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||| ||||||||| |  |||||||| || |||  ||||||||||  |||||||| |||| ||||||||||    
T  28034225 tgtgtgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataagtgagagaacccataaac 28034306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 44621027 - 44621079
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||| | |||||||    
T  44621027 atcggataaaacagtaaaggttgaacaccttataagtaagagggcacataaac 44621079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 45489864 - 45489792
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||| ||| || |||||||||||||||| ||||| ||| ||||||| ||| || || ||||||    
T  45489864 tgtgagttatatgtatcacattggataaaagagtaaagattgaatatcatataagtaagatgatccttaaacc 45489792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 39699079 - 39699026
Alignment:
Q  235 aaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    |||||||||| || |||||||||||||||| || ||||| |||||| |||||||    
T  39699079 aaatcggatataaaagtaaaggttgaacatattctaagtaagaggatccataaa 39699026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 760194 - 760278
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||| || |||| ||| || | | ||||||||  |  |||||||| ||||||||||||||| ||| |||||||    
T  760194 gtgtgagttatatgtcccacatcgaatagaaaaatgaaggttgagaactttataagtgagaggacccataaactcattgccttaa 760278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 11348494 - 11348410
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    ||||| ||||||||| ||||||||||||||   | ||| ||||||| |||  ||||||||||  |||||||| |||||| |||||    
T  11348494 tgttgttgtgtgcaattgtgagttatatgttctacatcagataaaatagtggaggttgaacactttataagtgagaggatccata 11348410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 88; Significance: 4e-42; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 5747 - 5866
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  5747 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 5846  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||||||| |||||||    
T  5847 ccataaacccattgccttaa 5866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 5386 - 5473
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||||||||||||||||||||||  | ||||||||||| ||||||||||||||| ||||||||| ||||| |||||||||    
T  5386 tgttgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagggcccataaac 5473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 4e-42; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 7553995 - 7554114
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||     
T  7553995 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggat 7554094  T
Q  282 ccataaacccatagccttaa 301  Q
    ||||||||||||||||||||    
T  7554095 ccataaacccatagccttaa 7554114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 191 - 301
Target Start/End: Complemental strand, 22566841 - 22566731
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||||| ||| ||||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  22566841 ttgagggggagtgttgttgtatgcaagtgtgagtaatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacc 22566742  T
Q  291 catagccttaa 301  Q
    ||| |||||||    
T  22566741 cattgccttaa 22566731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 183 - 301
Target Start/End: Original strand, 30244241 - 30244359
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||| | ||||||||| |||||||     
T  30244241 actcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagaggact 30244340  T
Q  283 cataaacccatagccttaa 301  Q
    ||||||||||| |||||||    
T  30244341 cataaacccattgccttaa 30244359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 7517570 - 7517669
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  7517570 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 7517669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 37533196 - 37533079
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||| || || |||||||| ||||||||||||||| ||||||||| |||||||    
T  37533196 gactcacgcttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggac 37533099  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||| ||| |||||||    
T  37533098 ccataaactcattgccttaa 37533079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 30245055 - 30245166
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||| ||||| ||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  30245055 cttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagacgacccataaac 30245154  T
Q  290 ccatagccttaa 301  Q
     ||| |||||||    
T  30245155 tcattgccttaa 30245166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 30255309 - 30255412
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||||||| || ||||||||||||||||||||||||||| ||||||||| ||||| |    
T  30255309 gactcacacttgagggggagtgttgttgtgtgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagggc 30255408  T
Q  282 ccat 285  Q
    ||||    
T  30255409 ccat 30255412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 1085786 - 1085685
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctt 299  Q
    ||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||| |||||    
T  1085786 agtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgcctt 1085687  T
Q  300 aa 301  Q
    ||    
T  1085686 aa 1085685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 30244671 - 30244771
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||| | |||||||    
T  30244671 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataaataagaggac 30244770  T
Q  282 c 282  Q
    |    
T  30244771 c 30244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 40094942 - 40094851
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  40094942 tgttgttgtgtgcaagtgtgagttatatgtctcacatcgaataaaagagtaaaggttcaacaccttataagtaagaggacccataaacccat 40094851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 201 - 293
Target Start/End: Original strand, 47129084 - 47129176
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  47129084 gtgttgttgtgcacaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagaggacccataaacccat 47129176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 16569186 - 16569285
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||| |||||||||||||||||||||||| |||||||| || ||||||||||||| | ||||||||| ||||||||||||||||||| |||||||    
T  16569186 tgttgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaa 16569285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 16596476 - 16596377
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||| |||||||||||||||||||||||| |||||||| || ||||||||||||| | ||||||||| ||||||||||||||||||| |||||||    
T  16596476 tgttgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaa 16596377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 24177425 - 24177524
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||| ||||||||||||| || |||||||||||||||||||| |||||| ||||||||| || |||||||||||||||| |||||||    
T  24177425 tgttgttgtgtgcaagtatgagttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagtaagcggacccataaacccattgccttaa 24177524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 190 - 285
Target Start/End: Original strand, 30245472 - 30245567
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||| ||||| |||||    
T  30245472 cttgagggggactgttgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttgaacaccttataagtaagagggcccat 30245567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 40230453 - 40230360
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||| ||||||||||| || |||| |||||| |||||| |||||||||||||||||| ||||||||||||||||||||| |||||    
T  40230453 tgtgtgcaagtgtaagttatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagaggacccataaacccatagtcttaa 40230360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 28301705 - 28301613
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctta 300  Q
    |||||||||||||||||||||||||||| |||||||| || |||||| | |||||| ||||||||| ||||||||||||||||||| ||||||    
T  28301705 tgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaagctgaacaccttataagtaagaggacccataaacccattgcctta 28301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 22567206 - 22567108
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||| ||||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  22567206 tgttgttgtatgcaagtgtgagtaatatgtc-cacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaa 22567108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 210 - 301
Target Start/End: Complemental strand, 36939893 - 36939802
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||| ||||||||| |||||||||||||| |||| |||||||    
T  36939893 tgtgcaagtgtgagttatatgtcccaaatcgtataaaatagtaaaagttgaacaccttataagtaagaggacccataaatccattgccttaa 36939802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 41910762 - 41910671
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||    
T  41910762 tgttgttgtgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagaggacccataaacccat 41910671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 195 - 289
Target Start/End: Original strand, 45434619 - 45434713
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||| ||||| ||||||| ||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  45434619 gggggggtgttgttgtgtacaagtgtaagttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagaggacccataaac 45434713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 8128603 - 8128510
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||||| || |||||||| || | ||||||||||||| |||||| || |||||||||||||||||||| ||||||    
T  8128603 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaaataaaggttgaacaccttatatgtaagaggacccataaacccataaccttaa 8128510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 36109084 - 36109007
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  36109084 gttgttgtgtgcaagtgtgagttatatttctcacatcggataaaagagtaaaggttgaacaccttataagtaagagga 36109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 14681482 - 14681591
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||| ||||||||||| || ||| ||||||| ||||||||||||||| ||| ||||| ||||| |    
T  14681482 gactcacacttgagggggagtgttg--gtttgcaagtgtaagttatatgtcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagagggc 14681579  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  14681580 ccataaacccat 14681591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 23545 - 23446
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||| ||||||||||||||  || |||||||| || ||||||||||||||| ||||||||| |||||||||||||||| || |||||||    
T  23545 tgttgttgtgtgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaa 23446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 183 - 301
Target Start/End: Complemental strand, 1085436 - 1085317
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttat-atgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| | ||||| || ||||||||||| |||||| |||||||| || |||||| |||| ||    
T  1085436 actcacacttgaaggggagtgttgttgtgtgcaagtgtgagtttttatgtcccatatcggataaaatagtaaaagttgaacaactcataagtaagagaac 1085337  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||| ||| |||||||    
T  1085336 ccataaactcattgccttaa 1085317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 214 - 301
Target Start/End: Original strand, 6054562 - 6054649
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||| |||||||||||||| ||||||||||| |||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  6054562 caagtgttagttatatgtctcacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaacacattgccttaa 6054649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 34218202 - 34218111
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||| ||| |||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||| ||||||| |||||||||||    
T  34218202 tgttgttgtgtacaaatgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaacccat 34218111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 45754706 - 45754804
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||| |||||||| ||||||||| ||| ||| |||||||||||||||||||    
T  45754706 tgttgttgtgtacaagtgtgagttatatgtc-cacatcggataaaatagtaaatgttgaacaccttataagtaagatgactcataaacccatagccttaa 45754804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 29157565 - 29157654
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || | ||||||||| ||||||||||||||| ||||||||| ||| |||||||||| |||| |||||||    
T  29157565 tgcaagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagtaagacgacccataaatccattgccttaa 29157654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 36622956 - 36623049
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||| ||||||||  ||||| ||||||| |||| |||||||    
T  36622956 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataagtaggaggatccataaatccattgccttaa 36623049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 45433231 - 45433330
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| |||||||||||||||||   || ||||||||||||||||||||||||||| ||||||||| |||| || |||||||| || |||||||    
T  45433231 tgttgttgtgtacaagtgtgagttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaacctattgccttaa 45433330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 219 - 301
Target Start/End: Original strand, 11845198 - 11845280
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||  || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||| |||| |||||||    
T  11845198 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaa 11845280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 36534952 - 36534864
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||||||||||| | ||||||||| ||  |||||||||| |||| |||||||||| ||||||||| ||||||||||||||||    
T  36534952 tgttgttgtgtgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaacc 36534864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 118469 - 118378
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||| ||||||||||| || ||| |||| || ||||||||||||||| || |||||| |||||| ||||||||||||    
T  118469 tgttgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaagaggatccataaacccat 118378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 43241485 - 43241572
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||||||||  || ||||||||||| | ||||||||||||| ||||||||| | ||||| |||||||    
T  43241485 tgttgttgtgtgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataagtaaaaggactcataaac 43241572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 24838870 - 24838780
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttag-aggacccataaaccc 291  Q
    ||||| |||||  |||||| |||||||||||||| |||| |||||||||||||||||||||| ||||||||| || |||| ||||||||||    
T  24838870 tgttgttgtgtataagtgtaagttatatgtctcacatcgaataaaagagtaaaggttgaacaccttataagtaagaaggatccataaaccc 24838780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 19122740 - 19122820
Alignment:
Q  220 tgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||| |||||| |||| |||||||    
T  19122740 tgagttatatgtc-cacatcggataaaatagtaaaggttgaacaccttataagtaagaggactcataaatccattgccttaa 19122820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 30032572 - 30032656
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||| || |||| ||||||||||||  |||||||| ||||||||| |||| | ||||||||| ||||||||||    
T  30032572 gtgtgagttatatgtcccacatcgaataaaagagtaagtgttgaacaccttataagtaagagtatccataaacctatagccttaa 30032656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 44361616 - 44361534
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctta 300  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||| ||| ||||| ||| || ||||||||||||| |||||    
T  44361616 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaacacctt-taagtaagatgatccataaacccataacctta 44361534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 9901648 - 9901720
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||||||||| | ||||||| ||||||||    
T  9901648 aagtgtgagttatatgtc-cacatcggataaaacagtaaaggttgaacatcttatacg-tagaggatccataaac 9901720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 37533519 - 37533433
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||   | || | |||||| ||||||||||||||| ||||||||| |||||||||||||| |||| |||||||    
T  37533519 aagtgtgagttatatgttctacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaa 37533433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 40094556 - 40094502
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaac 262  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||||||||||||    
T  40094556 tgtgtgcaagtgtgagttatatgtccaacatcagataaaagagtaaaggttgaac 40094502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 36967397 - 36967344
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaag 255  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  36967397 tgttgttgtgtacaagtgtgagttatatgtctcacatcggataaaaaagtaaag 36967344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 41854631 - 41854694
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataag 272  Q
    ||||||||||| ||||||||||||| || ||| | ||||||||||||||||||||| ||||||||    
T  41854631 tgtgtgcaagtatgagttatatgtcccacatcag-taaaagagtaaaggttgaacaccttataag 41854694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 20599317 - 20599403
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||| || ||||||||||| |||||||| | ||||  |||||| | |||||||  |||||| ||| |||||||    
T  20599317 aagtgtgagttatatgtcccatatcggataaaaaagtaaaggataaacactttataaataagaggacatataaactcattgccttaa 20599403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 37533259 - 37533213
Alignment:
Q  133 gcagcaacggctatacatgcaaagtaaaaagcttccactctagggga 179  Q
    ||||||||||| |||||  ||||||||||||||||| ||||||||||    
T  37533259 gcagcaacggcgatacagacaaagtaaaaagcttccgctctagggga 37533213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 48243262 - 48243218
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatat 229  Q
    |||| ||||||||||||||||| ||||| ||||| ||||||||||    
T  48243262 tcacacttgagggggagtgttgttgtgtacaagtctgagttatat 48243218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 4e-42; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 34364895 - 34365014
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| | ||||||||||||| ||||||||| |||||||    
T  34364895 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaataataaaggttgaacaccttataagtaagaggac 34364994  T
Q  282 ccataaacccatagccttaa 301  Q
    ||||||||||||||||||||    
T  34364995 ccataaacccatagccttaa 34365014  T

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Target: chr1; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 44290644 - 44290527
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| |||||||    
T  44290644 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggac 44290547  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||||||| |||||||    
T  44290546 ccataaacccattgccttaa 44290527  T

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Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 37556081 - 37556200
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggat-aaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||| ||||||    
T  37556081 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaagagga 37556180  T
Q  281 cccataaacccatagccttaa 301  Q
     ||||||||||||||||||||    
T  37556181 -ccataaacccatagccttaa 37556200  T

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Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 26661710 - 26661591
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||||||||||| ||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||| |||||||    
T  26661710 gactcacacttaagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggac 26661611  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||| ||| |||||||    
T  26661610 ccataaactcattgccttaa 26661591  T

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Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 22077680 - 22077564
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||   |||||||||||||||||||||||||| |||||||| || ||||||||||||||| ||||||||| |||||||    
T  22077680 gactcacacttgagggggagtgttg---tgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggac 22077584  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||| | |||||||||    
T  22077583 ccataaactcgtagccttaa 22077564  T

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Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 41157345 - 41157462
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||||||| ||| ||||||||||||||||||||||||| || ||| |||||||||||||| |||||||| ||||||||| |||||||    
T  41157345 gactcacacttaagggggagtattgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagaggac 41157444  T
Q  282 ccataaacccatagcctt 299  Q
    |||||||||||| |||||    
T  41157445 ccataaacccattgcctt 41157462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 34364496 - 34364596
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctta 300  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||| || ||||||||||||||||    
T  34364496 gtgttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccgtaaacccatagcctta 34364595  T
Q  301 a 301  Q
    |    
T  34364596 a 34364596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 41184593 - 41184494
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||| |||||||    
T  41184593 tgttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaa 41184494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 3537333 - 3537226
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  3537333 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 3537236  T
Q  282 ccataaaccc 291  Q
    ||||||||||    
T  3537235 ccataaaccc 3537226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 17294573 - 17294666
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||||    
T  17294573 tgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaa 17294666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 44290983 - 44290894
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  44290983 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 44290894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 183 - 290
Target Start/End: Original strand, 11977251 - 11977358
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||| |||||| |||||||| ||||||||| |||| ||     
T  11977251 actcacacttgagggggagtgttgctgtgtacaagtgtgagttatatgtcccacatcgggtaaaacagtaaatgttgaacaccttataagtaagagcact 11977350  T
Q  283 cataaacc 290  Q
    ||||||||    
T  11977351 cataaacc 11977358  T

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Target: chr1; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 210 - 301
Target Start/End: Original strand, 41142370 - 41142461
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| | ||||||||||||||||| |||||||    
T  41142370 tgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaacccattgccttaa 41142461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 22077990 - 22077900
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcct 298  Q
    |||||||||||||||||||||||| | |||||||||| || | ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  22077990 tgtgtgcaagtgtgagttatatgttttaaatcggatagaaaaataaaggttgaacatcttataagtaagaggacccataaactcatagcct 22077900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 21378209 - 21378117
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccata 294  Q
    ||||| ||||||||||||| ||||||||||| || |||||||| || ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  21378209 tgttgttgtgtgcaagtgtcagttatatgtcccagatcggatagaacagtaaaggttgaatatcttataagtaagaggacccataaacccata 21378117  T

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Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 41156981 - 41157068
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||| ||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  41156981 tgttgttgtgtgcaagtgtgaattatatgtcccataacggataaaagagtaaaggttgaacaccttataagtaagaggacccataaac 41157068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 215 - 290
Target Start/End: Complemental strand, 50052178 - 50052103
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  50052178 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacc 50052103  T

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Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 3550721 - 3550809
Alignment:
Q  213 gcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||    
T  3550721 gcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaa 3550809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 26662066 - 26661967
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| |||||||||||||||| || || ||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||| || |||||||    
T  26662066 tgttgttgtgtacaagtgtgagttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaaccgattgccttaa 26661967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 29798189 - 29798288
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||| |||||||||||||||||||||  | || |||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||    
T  29798189 tgttgttgtatgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaa 29798288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 45084378 - 45084457
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataa 287  Q
    |||||||||||||||||||||| || || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  45084378 tgtgtgcaagtgtgagttatatctcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataa 45084457  T

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Target: chr1; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 3875493 - 3875400
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||| || ||||||||||| || ||||||||||| ||||||||||| ||| ||||||||| ||||||| ||||||||||| |||||||    
T  3875493 tgtgtgcaagagtcagttatatgtcacacatcggataaaaaagtaaaggttgtacaccttataagtaagaggactcataaacccattgccttaa 3875400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 5320123 - 5320034
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||  || |||||||| || |||||| |||||||| ||||||||| ||||||||||||||| |||||||||||    
T  5320123 tgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaa 5320034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 31767329 - 31767241
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| |||||||||||||| |||||||||  || ||||||||||| ||||||||||||||| ||||||||| ||||||||||| ||||    
T  31767329 tgttgttgtgtgcaagtgtgggttatatgttccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccattaacc 31767241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 37850768 - 37850680
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||||||||||||||||||||||| || |||| |||||| |||| |||||||||| ||||||||| |||| |||||||||||    
T  37850768 tgttgttgtgtgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaacccataaacc 37850680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 48588674 - 48588557
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || |||||||||||||| ||||||  | ||||||||||| ||||||||||||||| ||||||||| ||| |||    
T  48588674 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttctatgtccgacatcggataaaatagtaaaggttgaacaccttataagtaagaagac 48588577  T
Q  282 ccataaacccatagccttaa 301  Q
    || ||||  ||| |||||||    
T  48588576 ccgtaaattcattgccttaa 48588557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 66274 - 66156
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttat-atgtctcaaatcggataaaagagtaaaggtt-gaacatcttataagttagagg 279  Q
    ||||||| ||||||||| |||||||   ||||||||||||||| || |||||||| |||||||| || |||||||||| ||||| ||||||||| |||||    
T  66274 gactcacacttgaggggaagtgttg---tgtgcaagtgtgagtaatcatgtctcacatcggatagaaaagtaaaggtttgaacaccttataagtaagagg 66178  T
Q  280 acccataaacccatagccttaa 301  Q
    ||||||||||| || |||||||    
T  66177 acccataaacctatggccttaa 66156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 5528902 - 5528835
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||    
T  5528902 agttatatgtctcacatcggataaaagagtaaaggttgaacatcttataaataagaggactcataaac 5528835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 38804511 - 38804424
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||| ||| || |||| ||||||||||||||||||||||  |||||||| |||||| ||||||||||||| ||||||    
T  38804511 caagtgtgagttatacgtcccacatcgaataaaagagtaaaggttgaacacattataagtaagaggatccataaacccataaccttaa 38804424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 66634 - 66553
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||  || |||||||| || ||||||||||||||| ||||||||| |||||| ||||||||    
T  66634 tgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaagaggatccataaac 66553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 24600476 - 24600395
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || |||||||| || |||||||||||||||| |||||||| |||| || |||||||    
T  24600476 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaactcataaac 24600395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 32594874 - 32594797
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||  | ||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  32594874 tgcaagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 32594797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 41759483 - 41759572
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| |||||| |||||||| ||||||||| ||| || ||||||| |||| |||||||    
T  41759483 tgcaagtgtgagttatatgtcacacatcggataaaatagtaaaagttgaacaccttataagtaagatgatccataaatccattgccttaa 41759572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 34649440 - 34649516
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||   || |||||||||||    
T  34649440 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtgcaagaacccataaacc 34649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 302
Target Start/End: Original strand, 44685452 - 44685547
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaagg-ttgaacatcttataagttagaggacccataaacccatagccttaat 302  Q
    ||||||||||||||||||||||||| || |||||||| || |||||||| ||||| | ||||||||| |||||||| |||||| ||| ||||||||    
T  44685452 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaat 44685547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 30630823 - 30630707
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||| |||||||||    ||||||||||||| |||||||||||| ||||||||||| | ||||||||  |||  |||||||| |||| ||    
T  30630823 gactcacacttgagagggagtgtta---tgtgcaagtgtgatttatatgtctcacatcggataaaaaattaaaggtttgacactttataagtaagagaac 30630727  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||| ||| |||||||    
T  30630726 ccataaacacattgccttaa 30630707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 40082398 - 40082475
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    |||| |||| ||||||||||||||||||||  | ||||||||||| ||||||||||||||| ||||||||| ||||||    
T  40082398 gttgttgtgcgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagga 40082475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 3537752 - 3537676
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||| ||||||||||| || ||||||||||| ||||||||||||||| ||||| ||| |||||||| ||||||||||    
T  3537752 gtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttatgagtaagaggacctataaacccat 3537676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 5575110 - 5575193
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||| ||  ||||||| |||||||||||||||||| ||||||||| |||||||| ||||| ||||||| ||||    
T  5575110 tgtgaattatatgtcccacgtcggatagaagagtaaaggttgaacaccttataagtaagaggacctataaatccatagctttaa 5575193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 39066369 - 39066282
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    |||||| |||||||||||||||||||||| |  || |||||||| || ||||||||||||||| ||||||| | ||| ||||||||||    
T  39066369 gtgttgttgtgtgcaagtgtgagttatatattccacatcggatagaaaagtaaaggttgaacaccttataactaagatgacccataaa 39066282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 35154207 - 35154150
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttg 259  Q
    ||||| ||||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  35154207 tgttgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttg 35154150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 1187526 - 1187445
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||| |||||||||||| |||| ||| || |||  ||||| ||||| |||||||| ||| |||||||||||    
T  1187526 tgtgtgcaagtgtgaattatatgtctcacatcgaatataaaagtggaggttaaacattttataagtgagaagacccataaac 1187445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 14318875 - 14318956
Alignment:
Q  220 tgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||  ||  |||||||||| ||||||||||||||| ||||||||| ||| |||||||||| | || |||||||    
T  14318875 tgagttatatgttccacgtcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaatctattgccttaa 14318956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 22793274 - 22793359
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||| |||||||||||||||||||| || |||| ||| || |||| |||||||| |  |||||||| |||||| ||||||||||||    
T  22793274 tgtgagcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagaggatccataaacccat 22793359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 24132143 - 24132054
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||||| |  |||||||| || ||||||||||||||| ||||||| | || ||| |||||||| ||| |||||||    
T  24132143 tgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaacaccttataaataaggggatccataaactcattgccttaa 24132054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 26661797 - 26661748
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  26661797 acaagcaacaagtggctccttgtgcagcaacgacgatacatgcaaagtaa 26661748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 301
Target Start/End: Original strand, 9955911 - 9955998
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaaga-gtaaaggttgaacatcttataagttagaggaccca-taaacccatagccttaa 301  Q
    ||||||||||||||||| || ||| ||||||| | ||||||||||||||  |||||||| |||||||||| |||||| || |||||||    
T  9955911 agtgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagaggacccattaaaccaattgccttaa 9955998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 4878799 - 4878869
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||||||| ||||||||||||||  || ||||||||||| ||| ||| |||||||| |||||||| ||||    
T  4878799 tgtgtgcaattgtgagttatatgttccacatcggataaaatagtgaagcttgaacattttataagtgagag 4878869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 4956218 - 4956268
Alignment:
Q  239 cggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| || ||||||||||||||||||||||||| |||||| ||||||||    
T  4956218 cggatagaaaagtaaaggttgaacatcttataagtaagaggatccataaac 4956268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 22077245 - 22077191
Alignment:
Q  235 aaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||| || ||||||||||||| | ||||||||| |||||||||||||||    
T  22077245 aaatcggatagaaaagtaaaggttgaataccttataagtaagaggacccataaac 22077191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 1188750 - 1188669
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||  || |||||||| || |||  |||||||| || |||||||| ||| ||| |||||||    
T  1188750 tgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgagaagactcataaac 1188669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 45494137 - 45494043
Alignment:
Q  212 tgcaagtgtgagtt-atatgtctcaaatcggataaaagagtaaaggttgaacatc----ttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||| ||||||| || ||||||||||| ||||||||||||||| |     ||||||| ||| || |||||||||||| |||||||    
T  45494137 tgcaagtgtgagtttatatgtcccacatcggataaaatagtaaaggttgaacaccatatatataagtaagatgatccataaacccattgccttaa 45494043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 50469256 - 50469188
Alignment:
Q  192 tgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||||   |||||||||||||||||||||||  | ||| ||||| | |||||||||||||||    
T  50469256 tgagggggagtgttg---tgtgcaagtgtgagttatatgtcctacatcagataataaagtaaaggttgaaca 50469188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 22077299 - 22077248
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    |||||||||||||||||   ||||||||||||||||||||||| || ||||||||    
T  22077299 cttgagggggagtgttg---tgtgcaagtgtgagttatatgtcccacatcggata 22077248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 37555733 - 37555800
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    |||||||||||||| ||| || ||||||||||| ||| ||||||||| |  |||||||| ||||||||    
T  37555733 aagtgtgagttataagtcccacatcggataaaatagtgaaggttgaatacattataagtaagaggacc 37555800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 50051837 - 50051777
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||| || ||||||||    
T  50051837 gactcacacttgagggggaatgttg--gtttgcaagtgtgagttatatgtcccacatcggata 50051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 19283617 - 19283524
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||||| || | |||||| || |||  ||||||| ||  || ||| | ||||||| ||||||| ||| |||||||    
T  19283617 tgtgtgcaagtgtgagttatatgtcccacaccggatagaaaagtggaggttgagcactttgtaaatgagaggacacataaactcatcgccttaa 19283524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 44043893 - 44043849
Alignment:
Q  249 agtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||| |||||||| ||||||||| ||| |||||||||||||||    
T  44043893 agtaaatgttgaacaccttataagtaagatgacccataaacccat 44043849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 17644 - 17525
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||| ||||| |||||||    
T  17644 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggac 17545  T
Q  282 ccataaacccatagccttaa 301  Q
    ||||||||||||||||||||    
T  17544 ccataaacccatagccttaa 17525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 3e-37; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 2578630 - 2578512
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || | |||||||||||||||||||||||||  |||||||| |||||||    
T  2578630 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacactttataagtaagaggac 2578532  T
Q  282 ccataaacccatagccttaa 301  Q
    ||||||||||||||||||||    
T  2578531 ccataaacccatagccttaa 2578512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 16108033 - 16108152
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||  || ||| |||||||||||||| |||||||| ||||||||| |||||||    
T  16108033 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcagataaaagagtaaatgttgaacaccttataagtaagaggac 16108132  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||||||| |||||||    
T  16108133 ccataaacccattgccttaa 16108152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 29518892 - 29519001
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  29518892 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 29518989  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  29518990 ccataaacccat 29519001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 2580040 - 2579941
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||| |||||||||||||||||| ||||||||    
T  2580040 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaacccacagccttaa 2579941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 3409632 - 3409747
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||  || ||| ||||||| |||||| |||||||||||||||||| |||||||    
T  3409632 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtaccacatcagataaaatagtaaaagttgaacatcttataagtaagaggac 3409729  T
Q  282 ccataaacccatagcctt 299  Q
    |||||||||||| |||||    
T  3409730 ccataaacccattgcctt 3409747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 35210204 - 35210293
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||||||||||| |||| |||||||    
T  35210204 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaaccattgccttaa 35210293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 214 - 301
Target Start/End: Original strand, 2377756 - 2377843
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  2377756 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 2377843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 195 - 293
Target Start/End: Original strand, 2378111 - 2378207
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  2378111 gggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 2378207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 191 - 301
Target Start/End: Original strand, 16454886 - 16454996
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||||| ||||| ||| |||||||||| |||| || ||| ||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  16454886 ttgagggggagtgttgttgtgtacaaatgtgagttatgtgtcccacatcagataaaagagtaaaggttgaacaccttataagtaataggacccataaacc 16454985  T
Q  291 catagccttaa 301  Q
     || |||||||    
T  16454986 tattgccttaa 16454996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 29518503 - 29518584
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  29518503 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 29518584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 32741179 - 32741260
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  32741179 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 32741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 593877 - 593789
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||| ||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  593877 tgttgctgagtgcaagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaacc 593789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 2579293 - 2579185
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||| ||||||||||| || |||||||||||||||||| |||||||| ||||||    ||||||     
T  2579293 gactcacacttgagggggagtgttgttgtgtacaagtgttagttatatgtcccacatcggataaaagagtaaaagttgaacaccttata----agaggaa 2579198  T
Q  282 ccataaacccata 294  Q
    |||||||||||||    
T  2579197 ccataaacccata 2579185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 16107668 - 16107767
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| |||||||||||||||||| ||| ||||||||||| |||||||||| |||| ||||||||| ||||||| ||||||||||| |||||||    
T  16107668 tgttgttgtgtacaagtgtgagttatatgtgtcacatcggataaaaaagtaaaggttaaacaccttataagtaagaggactcataaacccattgccttaa 16107767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 3409259 - 3409348
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  3409259 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaa 3409348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 10074168 - 10074060
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||   |||||||| ||||||||||| || || |||||||| || |||||| |||||||| ||||||||| |||||||||||||||    
T  10074168 cttgagggggagtgttg---tgtgcaagggtgagttatatatcccacatcggatagaaaagtaaacgttgaacaccttataagtaagaggacccataaac 10074072  T
Q  290 ccatagccttaa 301  Q
    |||| |||||||    
T  10074071 ccattgccttaa 10074060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 10074548 - 10074432
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| |||||||||||||   ||||||||||||||||| | ||| || |||||||| || ||||||||||||||| ||||||||| |||||||    
T  10074548 gactcacacttaagggggagtgttg---tgtgcaagtgtgagttagaggtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggac 10074452  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||| ||| |||||||    
T  10074451 ccataaactcattgccttaa 10074432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 26544049 - 26544138
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||  |||||||    
T  26544049 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaacccaccgccttaa 26544138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 16454565 - 16454664
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| |||||||||||||| |||| || ||| ||||||||| |||| |||||||| ||||||||| ||||||||||||||||||| |||||||    
T  16454565 tgttgttgtgtacaagtgtgagttatgtgtcccacatcagataaaagaataaaagttgaacaccttataagtaagaggacccataaacccattgccttaa 16454664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 1846748 - 1846837
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||| || ||||||||| ||||||||||| ||||||||||||||| ||||||||| |||| ||||||||| |||| |||||||    
T  1846748 tgcaagtgtgaattctatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagcacccataaatccattgccttaa 1846837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 3058226 - 3058315
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||| ||||||||||| || ||||||||||| ||||||||||||||| |||||||||  ||||| |||||||||||| |||||||    
T  3058226 tgcaagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtatgaggatccataaacccattgccttaa 3058315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 14748496 - 14748419
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| | |||||||||||||||    
T  14748496 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaac 14748419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 301
Target Start/End: Complemental strand, 32460733 - 32460649
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||| || |||| |||||| ||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||    
T  32460733 gtgtgagttatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaa 32460649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 9062501 - 9062430
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||| |||||||    
T  9062501 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggactcataaac 9062430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 5832182 - 5832108
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||| ||||||||||| || || |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  5832182 caagtgtaagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 5832108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 1950340 - 1950267
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| |||| |||| |||||| |||||||    
T  1950340 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaagaggagccataaa 1950267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 301
Target Start/End: Original strand, 3415462 - 3415547
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||| || |||  |||||| ||||||||||||||| | ||||||| ||||||||||||||||||| |||||||    
T  3415462 agtgtgagttatatgtcccacatcacataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgccttaa 3415547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 1127360 - 1127441
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||| || || ||||| ||||| ||||||||||||||| ||||||||| ||||||| |||||||||||    
T  1127360 tgcaactgtgagttatatatcccacatcgggtaaaatagtaaaggttgaacaccttataagtaagaggactcataaacccat 1127441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 10073776 - 10073697
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||| ||||||||||| || |||||| |||||  ||||||||||||| ||||||||| |||||| ||||||||    
T  10073776 tgtgtgcaagtgttagttatatgtcccacatcggagaaaag--taaaggttgaacaccttataagtaagaggatccataaac 10073697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 10911565 - 10911655
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaaga-gtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||||||  | ||| ||||||| | |||||||||||||| ||||||||| ||||||| ||||||| ||| |||||||    
T  10911565 tgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaa 10911655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 2843560 - 2843644
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga-cccataaacccatagccttaa 301  Q
    |||||||||||||| ||| ||||||||||| | |||| |||||||| ||||||||| |||||| ||||||||| ||| |||||||    
T  2843560 tgtgagttatatgtttcacatcggataaaataataaaagttgaacaccttataagtaagaggaccccataaactcattgccttaa 2843644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 5958764 - 5958684
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||| |||||||||||||| | | ||||||||||| ||||||||||||||| ||||||| | |||| || |||||||    
T  5958764 gtgtgcaattgtgagttatatgtgttacatcggataaaacagtaaaggttgaacaccttataaataagagaactcataaac 5958684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 6999951 - 6999877
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||  | ||||||||||| |||||| |||||||| |||||| || |||||| ||||||||    
T  6999951 aagtgtgagttatatgtcctacatcggataaaaaagtaaaagttgaacaccttatatgtaagaggatccataaac 6999877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 2579677 - 2579561
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||| |||||||| |    ||| |||||||||||||||| || |||||| |||| ||||||||| | | | ||||||||| ||||| |    
T  2579677 gactcacacttgagggagagtgttgtta---gcaggtgtgagttatatgtcccacatcggacaaaaaagtaaaggtcggataccttataagtaagagggc 2579581  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||| ||| |||||||    
T  2579580 ccataaactcattgccttaa 2579561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 8481898 - 8482015
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||  ||| ||||||||||||||||||||||||| || ||| |||| || |||  ||||||||||  |||||| | ||| |||    
T  8481898 gactcacacttgagggggaga-ttgttgtgtgcaagtgtgagttatatgtc-cacatcagatataaaagtggaggttgaacactttataaatgagatgac 8481995  T
Q  282 ccataaacccatagccttaa 301  Q
     ||||||| ||| |||||||    
T  8481996 tcataaactcattgccttaa 8482015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 2579016 - 2578916
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccca 284  Q
    |||| |||||||||||||||||   || |||||||||| ||||||||| |  ||||||||||| |||||| |||||| | ||||||| | |||||| |||    
T  2579016 tcacacttgagggggagtgttg---tgagcaagtgtgatttatatgtccctcatcggataaaa-agtaaatgttgaataccttataaataagaggatcca 2578921  T
Q  285 taaac 289  Q
    |||||    
T  2578920 taaac 2578916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 6071128 - 6071221
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||||| || || | ||| || |||  ||||||||||  |||||||| ||| || |||||||| ||| |||||||    
T  6071128 tgtgtgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacactttataagtgagatgatccataaactcattgccttaa 6071221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 14789325 - 14789284
Alignment:
Q  249 agtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||||||| |||| |||| ||||||||||||||||    
T  14789325 agtaaaggttgaacaccttacaagtaagaggacccataaacc 14789284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 35210503 - 35210551
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||| ||||||||||||| | ||| ||||| |||||||||||    
T  35210503 atcggataaaatagtaaaggttgaataccttgtaagtaagaggacccat 35210551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 3e-37; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 26074582 - 26074701
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||| |||||||    
T  26074582 gactcacacttgagggggagtgtttttgtgtacaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtaagaggac 26074681  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||||||| |||||||    
T  26074682 ccataaacccattgccttaa 26074701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 26075330 - 26075231
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  26075330 tgttgttgtgtacaagtgtgatttatatgtctcacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 26075231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 26074970 - 26074862
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||   |||||||  ||||||    
T  26074970 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacaatataagtaggaggac 26074871  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  26074870 ccataaacc 26074862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 15370089 - 15370188
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  15370089 tgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaatccacagccttaa 15370188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 202 - 299
Target Start/End: Complemental strand, 40296483 - 40296386
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctt 299  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| || |||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  40296483 tgttggtgtgtgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaacccattgcctt 40296386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 3295204 - 3295086
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtg--caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagg 279  Q
    ||||||| ||||||||||||||||| ||||||  ||||||||||| ||||||| || ||||||||||| ||||||||||||||| ||||||||| ||| |    
T  3295204 gactcacacttgagggggagtgttgttgtgtgtgcaagtgtgagt-atatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaag 3295106  T
Q  280 acccataaacccatagcctt 299  Q
    |||||||||||||| |||||    
T  3295105 acccataaacccattgcctt 3295086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 13415947 - 13415840
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||| |||| || ||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| ||||||||| |||||||    
T  13415947 gactcacacttgagggg-agtgctgttgtgtgcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagaggac 13415849  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  13415848 ccataaacc 13415840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 183 - 301
Target Start/End: Complemental strand, 26074330 - 26074215
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    |||||| |||||||||||||||||   ||||||||||||||||||||||| || ||||||||||| ||||||||||||||| || ||| || ||||||||    
T  26074330 actcacacttgagggggagtgttg---tgtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaacacctcatatgtaagaggacc 26074234  T
Q  283 cataaacccatagccttaa 301  Q
    ||| ||||||| |||||||    
T  26074233 catgaacccattgccttaa 26074215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 299479 - 299578
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| |||| |||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||| |||||||||||    
T  299479 tgttgttgtgcgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaactcatagccttaa 299578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 6224186 - 6224285
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  6224186 tgttgttgtgtacaagtgtgagttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcatcgccttaa 6224285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 41170640 - 41170723
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  41170640 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaa 41170723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 208 - 292
Target Start/End: Original strand, 41632778 - 41632862
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    ||||||||||||| |||||||||||||| |||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||    
T  41632778 tgtgtgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaaccca 41632862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 18603276 - 18603189
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  18603276 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 18603189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 36492385 - 36492298
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  36492385 tgttgttgtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccaataaac 36492298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 9498812 - 9498723
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| |||||||||||||||||| ||| |||| || ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  9498812 tgcaaatgtgagttatatgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 9498723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 32487394 - 32487482
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| | ||||||| ||||||||||||||||||| |||||||    
T  32487394 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca-cctataagtaagaggacccataaacccattgccttaa 32487482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 6500795 - 6500911
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||| |||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| | | |||||    
T  6500795 gactcacacttgatggggagtgttg--gtttgcaagtgtgagttatatgtc-cacatcggataaaatagtaaaggttgaacaccttataaataaaaggac 6500891  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||| ||| |||||||    
T  6500892 ccataaactcattgccttaa 6500911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 185 - 299
Target Start/End: Original strand, 624171 - 624283
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccca 284  Q
    |||| ||||||||| |||||||  || ||||||||||||||||||||| || || | |||||| |||||||||||||||  |||||||| ||| ||||||    
T  624171 tcacacttgaggggaagtgttg--gtttgcaagtgtgagttatatgtcccacattgtataaaatagtaaaggttgaacacgttataagtaagatgaccca 624268  T
Q  285 taaacccatagcctt 299  Q
    |||||||||||||||    
T  624269 taaacccatagcctt 624283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 12662820 - 12662729
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||| |||  ||||||||| ||||    
T  12662820 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaatccat 12662729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 6500451 - 6500539
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||  ||||||||| |||||||    
T  6500451 tgcaagtgtgagttatatgtc-cacatcggataaaatagtaaaggttgaacaccttataagtaagaggacctttaaacccattgccttaa 6500539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 27502194 - 27502105
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || || |||||||| |||||||||| |||| ||||||||| |||||||||||||||| || |||||||    
T  27502194 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagaggacccataaacctattgccttaa 27502105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 35150003 - 35150087
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||| ||| |||||||||| ||||    
T  35150003 tgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaaga-gacccataaatccat 35150087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 36568729 - 36568636
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||||| || |||||||| || |||||| |||||||| ||||||||| ||| ||||| ||||||||| |||||||    
T  36568729 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacccgtaaacccattgccttaa 36568636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 11417143 - 11417046
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||  ||||||||||  || ||||||||||| ||||||||||||||| ||||||||| |||||| |||||||||||| |||||||    
T  11417143 tgttgttgtgtgcaagtg--agttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaa 11417046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 1028679 - 1028586
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||||||||| || |||||||| || |||||||| ||||||  |||||||| |||||||||||||||| ||| ||||||    
T  1028679 tgtgtacaagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaacctataaccttaa 1028586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 3295505 - 3295413
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||| |||||||||| ||||||  || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||| || |||||||    
T  3295505 tgtgtggaagtgtgagt-atatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccaattgccttaa 3295413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 202 - 290
Target Start/End: Original strand, 25327925 - 25328013
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| |||||  ||||||||||||||||||  | ||||||||||| |||||| |||||||| ||||||||| ||||||||||||||||    
T  25327925 tgttgttgtgtctaagtgtgagttatatgtcctacatcggataaaacagtaaaagttgaacaccttataagtaagaggacccataaacc 25328013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 35914839 - 35914930
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||  |||| ||||||||||||| || |||||||||||||||||||||||||||| |||||||| ||| ||||| |||| ||||    
T  35914839 tgttgttgtgtataagtatgagttatatgtcacacatcggataaaagagtaaaggttgaacattttataagtaagaagacccgtaaatccat 35914930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 15370384 - 15370491
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| |||||||||||||||||             |||||| ||| |||||| |||||||| ||||||||| |||||||    
T  15370384 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagtg------------tcggatgaaacagtaaatgttgaacaccttataagtaagaggac 15370471  T
Q  282 ccataaacccatagccttaa 301  Q
    ||||||||||||||||||||    
T  15370472 ccataaacccatagccttaa 15370491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 31509594 - 31509710
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||| |||  ||| |||||||||||||||||||||||||||| |||||||| || |||  ||||||| ||  |||||||| |||||||    
T  31509594 gactcacacttgagggagaga-ttgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggac 31509692  T
Q  282 ccataaacccatagcctt 299  Q
     ||||||| ||| |||||    
T  31509693 tcataaactcattgcctt 31509710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 42508608 - 42508701
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||| |||||| || || |||||||| || |||||||||| ||||||| |||||| ||||||| ||||||||||| |||||||    
T  42508608 tgtgtacaagtgtgaattatatatcccacatcggatagaaaagtaaaggttaaacatctaataagtaagaggactcataaacccattgccttaa 42508701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 42405764 - 42405676
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||| |||||||||||||||||||  | ||||||||||| ||||||||||||||| |||| |||| | ||||| ||||||||    
T  42405764 tgttgttgtgtacaagtgtgagttatatgtccaacatcggataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaacc 42405676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 24489389 - 24489275
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||   ||| ||||||||||||||||||| || ||| |||| || || ||||||| |||| ||||| ||| |||  ||    
T  24489389 gactcacacttgagggggagtgttg---tgttcaagtgtgagttatatgtcccacatcagatagaaaagaaaaggttaaacaccttattagtaaga--ac 24489295  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||||||| |||||||    
T  24489294 ccataaacccattgccttaa 24489275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 292
Target Start/End: Original strand, 26074320 - 26074398
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    ||||||||||||||||||| || ||| |||| || | ||||| ||||||| ||||||||| ||||||||||||||||||    
T  26074320 caagtgtgagttatatgtcccacatcagatagaaaactaaagattgaacaccttataagtaagaggacccataaaccca 26074398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 35168006 - 35167920
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||| ||||| ||||| |||||||| | ||||| ||| ||||||||||||||||||||||| |||||||||  || ||||||||||    
T  35168006 tgttgttgtgtacaagtatgagttatgtatctcacatcagataaaagagtaaaggttgaacaccttataagtaggatgacccataaa 35167920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 623818 - 623907
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||  ||| |||| ||  || ||||||||  ||||||||||    
T  623818 tgcaagtgtgagttatatgtctcacatcggatataatagtaaaggttgaacactttacaagtaagttgagccataaacttatagccttaa 623907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 38427553 - 38427620
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    |||||||||||||||| || || ||||| || |||||||||||||||||||||||| ||||||||||||    
T  38427553 gtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacatcttataag-tagaggacccat 38427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 34753193 - 34753094
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| ||| ||| ||||||||||| || || ||||| || |||||| |||||||| ||||||||| ||| |||||||||||| || |||||||    
T  34753193 tgttgttgtgtacaaatgtaagttatatgtcccacattggatagaaaagtaaaagttgaacaccttataagtaagaagacccataaaccgattgccttaa 34753094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 39309680 - 39309765
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccata 294  Q
    ||||| ||||| ||||||||||||| || |||||||||||| ||||| ||||||||  |||||| | |||||| |||||||||||||    
T  39309680 tgtgtacaagtatgagttatatgtcccacatcggataaaagggtaaatgttgaacacattataaataagagga-ccataaacccata 39309765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 7768852 - 7768925
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataa 287  Q
    |||||||||||||||| ||  | ||||||||||| | ||||||||||||| ||||||||| | |||||||||||    
T  7768852 caagtgtgagttatatatcctacatcggataaaataataaaggttgaacaccttataagtaaaaggacccataa 7768925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 29549413 - 29549336
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||  || ||| ||||||| |||||||| |||||| | ||||||| ||| |||||||||||    
T  29549413 tgcaagtgtgagttatatgttccatatcagataaaatagtaaaggatgaacaccatataagtaagaagacccataaac 29549336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 35150736 - 35150789
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaa 254  Q
    |||||| ||||||||||||||||||||||||| || |||| |||||||||||||    
T  35150736 gtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 35151027 - 35151080
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaa 254  Q
    |||||| ||||||||||||||||||||||||| || |||| |||||||||||||    
T  35151027 gtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35151080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 36522413 - 36522314
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||||||||   | || ||||||||||||||||||||| || ||||| || | |  | ||||||||| |||||||| |||||||| |||||||    
T  36522413 ttgagggggagtgttg---tatgaaagtgtgagttatatgtctcacattggatagaaaaatggaagttgaacattttataagtgagaggaccaataaacc 36522317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 13785794 - 13785732
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaa 247  Q
    |||||||  ||||||||||||||||   |||| |||||||||||||||||| ||||||||||||||    
T  13785794 gactcacatttgagggggagtgttg---tgtggaagtgtgagttatatgtcccaaatcggataaaa 13785732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 41635359 - 41635268
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||  |||| |||||||||||| ||  ||| |||||||||||||| |||||||| ||||||| | |||||| ||||||| ||||    
T  41635359 tgttgttgtgtataagtatgagttatatgtttcccatcagataaaagagtaaatgttgaacaccttataaataagaggatccataaatccat 41635268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 42524719 - 42524797
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||| |||||||||||| |||||||| || |||||| |||||||||||||| | | ||||||| |||||| ||||    
T  42524719 caagtgtgaattatatgtctcacatcggatagaaaagtaaa-gttgaacatcttatgaataagaggactcataaatccat 42524797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 300955 - 301025
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||| |||||||| |||||||||| || ||| ||||||| ||||||||||||| | ||||||||| ||||    
T  300955 tgtgtacaagtgtgggttatatgtcccacatcagataaaacagtaaaggttgaataccttataagtaagag 301025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 36522081 - 36521965
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca-tcttataagttagagga 280  Q
    ||||||| |||||||| ||||||||   || |||||||||||||||||||| || ||| |||| || |||  |||||||||| |||| ||| | ||||||    
T  36522081 gactcacacttgagggagagtgttg---tgcgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttgaacactctt-taaatgagagga 36521986  T
Q  281 cccataaacccatagccttaa 301  Q
    |||||||||| || |||||||    
T  36521985 cccataaaccaattgccttaa 36521965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 5723949 - 5723876
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||||||||||||| || ||||||||||| | |||| ||||||||  ||||| || |||| ||||||    
T  5723949 tgcaagtgtgagttatatgtcccacatcggataaaataataaaagttgaacacattatatgtaagagaacccat 5723876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 33747783 - 33747860
Alignment:
Q  224 ttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||| || ||||||||||| |||||||||| || |  |||||||| |||||| |||||||| ||| |||||||    
T  33747783 ttatatgtcccacatcggataaaatagtaaaggttaaatactttataagtaagaggatccataaactcattgccttaa 33747860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 2411010 - 2411084
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||  | || ||||| |  |||||| |||||||||||| ||||| |||| ||||||||||    
T  2411010 aagtgtgagttatatgtcctacattggatagagaagtaaaagttgaacatcttgtaagtaagagaacccataaac 2411084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 795249 - 795196
Alignment:
Q  111 caagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagc 164  Q
    |||||| ||||||||| |||||||||||||||  |||||  |||||||||||||    
T  795249 caagcagcaagtggctccttgtgcagcaacggtgatacagacaaagtaaaaagc 795196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 6225047 - 6225104
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataag 272  Q
    |||| |||||||||| || || ||| ||||||||| ||||||||||||| ||||||||    
T  6225047 aagtctgagttatatatcccacatcagataaaagaataaaggttgaacaccttataag 6225104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 9498556 - 9498507
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||| ||||||||| ||||||||| |||||  |||||||||||||||    
T  9498556 acaagcagcaagtggctccttgtgcaggaacggtgatacatgcaaagtaa 9498507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 26591068 - 26590992
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||| ||| ||||  || |||| ||  || ||||||||||||||| ||||||||| |||||| |||||||    
T  26591068 tgcaagtgtgatttaaatgttccatatcgaatcgaaaagtaaaggttgaacaccttataagtaagaggatccataaa 26590992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 6e-35; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 9309325 - 9309444
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| |||||||    
T  9309325 gactcacaattgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagaggac 9309424  T
Q  282 ccataaacccatagccttaa 301  Q
    || ||||| ||| |||||||    
T  9309425 ccttaaactcattgccttaa 9309444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 30359579 - 30359698
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||| |||||||    
T  30359579 gactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagaggac 30359678  T
Q  282 ccataaacccatagccttaa 301  Q
     |||||||||||| ||||||    
T  30359679 tcataaacccataaccttaa 30359698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 30359261 - 30359360
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||    
T  30359261 tgttgttgtgtacaagtgtgagttatatgtctcacatcggataaaagagtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaa 30359360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 34835187 - 34835298
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||| |||| |||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  34835187 cttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 34835286  T
Q  290 ccatagccttaa 301  Q
     ||| |||||||    
T  34835287 tcattgccttaa 34835298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 8918952 - 8918844
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| || ||| ||||  |||||||||||||||||  |||||||| |||||||    
T  8918952 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggac 8918853  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  8918852 ccataaacc 8918844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 8794100 - 8794189
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||||| ||||||||    
T  8794100 gtgttgttgtgtacaagtgtgagttatatgtctcacatcggataaaagaataaatgttgaacatcttataagtaagaggactcataaacc 8794189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 298
Target Start/End: Complemental strand, 9482782 - 9482676
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||| ||||| ||||||  ||||||||||  || || |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9482782 cttgagggggagtgttgttgtgtacaagtg--agttatatgttccacatgggataaaagagtaaaggttgaacaccttataagtaagaggacccataaac 9482685  T
Q  290 ccatagcct 298  Q
    |||| ||||    
T  9482684 ccattgcct 9482676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 45122219 - 45122138
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  45122219 tgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaacccataaac 45122138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 290
Target Start/End: Original strand, 45122984 - 45123082
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| |||| ||  ||||| ||| |||||||||||    
T  45122984 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacacct--taagtaagatgacccataaac 45123081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 34835444 - 34835564
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaat-cggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||  | | ||||||| |||||||||| |||| ||||||||| ||||||    
T  34835444 gactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagagga 34835543  T
Q  281 cccataaacccatagccttaa 301  Q
    ||||||||| ||| |||||||    
T  34835544 cccataaactcattgccttaa 34835564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 34835710 - 34835830
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaat-cggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||  | | ||||||| |||||||||| |||| ||||||||| ||||||    
T  34835710 gactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagagga 34835809  T
Q  281 cccataaacccatagccttaa 301  Q
    ||||||||| ||| |||||||    
T  34835810 cccataaactcattgccttaa 34835830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 147441 - 147540
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| || ||| |||||||||||||||||| || ||||||||||||||||||||||||||| ||||||| | |||||||||||||||| || |||||||    
T  147441 tgttgttgcgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaacctattgccttaa 147540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 1014057 - 1013941
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||  || ||||||||||| |||||| |||||||| | ||||||| |||||||    
T  1014057 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgttccacatcggataaaatagtaaaagttgaacaccctataagtaagaggac 1013960  T
Q  282 ccataaacccatagcctta 300  Q
    | |||||||||| ||||||    
T  1013959 caataaacccattgcctta 1013941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 3038458 - 3038359
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| | ||||||||||||||||| |||||||    
T  3038458 tgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaacccattgccttaa 3038359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 284
Target Start/End: Complemental strand, 18372442 - 18372342
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||   ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| ||| |||    
T  18372442 gactcacacttgagggggagtgttgttgtga--aagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaagac 18372345  T
Q  282 cca 284  Q
    |||    
T  18372344 cca 18372342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 45121843 - 45121725
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||||||||||| ||||| |||||||||||| | |||| || |||||||||||||||||||||||| || ||||||||| ||||||     
T  45121843 gactcacacttaagggggagtgttgttgtgtacaagtgtgagttgt-tgtcccacatcggataaaagagtaaaggttgatcaccttataagtaagaggat 45121745  T
Q  282 ccataaacccatagccttaa 301  Q
    ||||||||| | ||||||||    
T  45121744 ccataaacctacagccttaa 45121725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 219 - 301
Target Start/End: Complemental strand, 70425 - 70343
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||| || |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||  |||||||    
T  70425 gtgagttatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagaggacccataaacccactgccttaa 70343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 1514077 - 1513984
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| |||||||||| || || ||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||    
T  1514077 tgtgtacaagtatgagttatatatcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccttaaacccataaccttaa 1513984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 3670032 - 3670138
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||| || ||||||||||| |||||||||| |||| |||||||||  ||||||    
T  3670032 gactcacacttgagggggactgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtttaacaccttataagtatgaggac 3670129  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  3670130 ccataaacc 3670138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 9608741 - 9608826
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||| ||| |||||||||||||||    
T  9608741 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccataaacccat 9608826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 41972154 - 41972239
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||| | |||||||||||||||||    
T  41972154 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgataggacccataaacccat 41972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 25561972 - 25561897
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  25561972 caagtgtgagttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaac 25561897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 33113535 - 33113436
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| ||||| |||||||||||||  | ||||||||||| |||||||||||||| |||||||||| ||||||||||||||| ||| |||||||    
T  33113535 tgttgttgtgtacaagtttgagttatatgtcctacatcggataaaatagtaaaggttgaacgtcttataagtaagaggacccataaactcattgccttaa 33113436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 147799 - 147880
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||||| |||||| ||||||||    
T  147799 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatctgataaaaaagtaaatgttgaaca 147880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 3669687 - 3669776
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| ||||||| ||||||| ||| |||||||    
T  3669687 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaa 3669776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 5420651 - 5420740
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||  ||||||||| || |||||||| || ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  5420651 tgcaagtgtgtattatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaacccattgccttaa 5420740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 9308973 - 9309065
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtct--caaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcct 298  Q
    |||||||||||||||||||||||||   || ||| |||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||    
T  9308973 tgtgtgcaagtgtgagttatatgtcctacacatcagataaaagagtaaaagttgaacatgttataagtaagaggacccataaacccattgcct 9309065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 9483324 - 9483264
Alignment:
Q  233 tcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  9483324 tcaaatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccat 9483264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 292
Target Start/End: Original strand, 40518555 - 40518662
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||| |||   ||| ||||||||||||||||||| || ||| |||| || ||||||||||||||| ||||||| | |||||||    
T  40518555 gactcacacttgagggggagtattg---tgttcaagtgtgagttatatgtcccacatcagatagaaaagtaaaggttgaacaccttataaataagaggac 40518651  T
Q  282 ccataaaccca 292  Q
    |||||||||||    
T  40518652 ccataaaccca 40518662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 43274947 - 43274859
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| |||||  ||||||||||||||||| ||| ||| ||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  43274947 tgttgttgtgtataagtgtgagttatatgtttcacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaacc 43274859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 301
Target Start/End: Complemental strand, 45122070 - 45121979
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||| || |||| |||||| |||||||||||||||  |||||||| ||||||| ||||||| ||| |||||||    
T  45122070 tgtgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaactcattgccttaa 45121979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 210 - 284
Target Start/End: Complemental strand, 18372859 - 18372785
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccca 284  Q
    |||| |||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  18372859 tgtgaaagtgtgagttatatgtcacacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccca 18372785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 20870733 - 20870642
Alignment:
Q  212 tgcaagtgtgagttatatgtct--caaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||| | |  || ||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  20870733 tgcaagtgtgagttatatatgttccacatcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccactgccttaa 20870642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 34834865 - 34834965
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctta 300  Q
    |||||| ||||| ||||||||||||||||||| || || |||||||| |||||||||| |||| ||||||||| ||| ||| ||||||| ||| ||||||    
T  34834865 gtgttgttgtgtacaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagatgactcataaactcattgcctta 34834964  T
Q  301 a 301  Q
    |    
T  34834965 a 34834965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 40579662 - 40579587
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||| |||||||| ||| || |||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  40579662 caagtgtgaattatatgtttcatattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 40579587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 41416322 - 41416251
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||| |||||||||    
T  41416322 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacc 41416251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 6877032 - 6876946
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatat-gtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    |||||| |||||||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||||||| | ||| ||||||||    
T  6877032 gtgttgttgtgtgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaacaccttataaataagatgacccata 6876946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 1014403 - 1014326
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||  | ||| ||||||| ||||||||||||||| ||||||||| ||||||||| |||||    
T  1014403 tgcaagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccgtaaac 1014326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 30441081 - 30441174
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatc----ttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || ||||| ||||| ||||||||||||||| |    |||||||| ||||| ||||||||||||| |||||||    
T  30441081 tgcaagtgtgagttatatgtcccacatcggctaaaatagtaaaggttgaacaccttaattataagtaagagggcccataaacccattgccttaa 30441174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 18371842 - 18371737
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||| || |||||  |||||  ||||||||||| || ||||||||||| ||||||||||||||||    ||||| ||| |||    
T  18371842 gactcacacttgagggggagtgctgttgtgtagaagtg--agttatatgtcacacatcggataaaatagtaaaggttgaacat----taagtaagaagac 18371749  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  18371748 ccataaacccat 18371737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 18373118 - 18373012
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||  ||||||||| ||||| || |||||| ||||||||| ||  |||||||||| ||||||||||||||| ||||||| | |||||||    
T  18373118 gactcacacttgagatggagtgttgttgtgtaca-gtgtgatttatatgtcccacttcggataaaatagtaaaggttgaacaccttataaataagaggac 18373020  T
Q  282 ccataaac 289  Q
     |||||||    
T  18373019 tcataaac 18373012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 20130454 - 20130536
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctta 300  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||| ||| ||||| ||| || ||||||||||||| |||||    
T  20130454 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaacacctt-taagtaagatgatccataaacccataacctta 20130536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 25561792 - 25561729
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  25561792 agttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagtacccat 25561729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 37544646 - 37544567
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||| ||| || ||||||||||| |||||||||||||||  |||||||  |||||||||||||| ||||    
T  37544646 caagtgtgagttataagtcgcacatcggataaaatagtaaaggttgaacacattataagaaagaggacccataaatccat 37544567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 32640682 - 32640601
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||     ||| || |||||||| |||||||||| |||||||    
T  32640682 aagtgtgagttatctgtctcacatcggataaaagagtaaaggttgaac-----ataggtaagaggaccgataaacccattgccttaa 32640601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 9609122 - 9609175
Alignment:
Q  249 agtaaaggttgaacatcttataagttagaggacccataaacccatagccttaat 302  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  9609122 agtaaaggttgaacatcttataagtaagatgacccataaacccatcgccttaat 9609175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 9620838 - 9620745
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||||||||||||| | | |||| || |||| | ||||| ||  |||||||| ||||||||||||||| ||| |||||||    
T  9620838 tgtgtgcaagtgtgagttatatgtctcacaacagatagaaaagtagaagttgatcactttataagtgagaggacccataaactcattgccttaa 9620745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 6731876 - 6731953
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaa 261  Q
    |||||||  |||||||||||||||| | ||  ||||||||||||||||||| || ||||||||||| |||||||||||||    
T  6731876 gactcacatttgagggggagtgttgttttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 6731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 45122649 - 45122701
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  45122649 atcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 45122701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 18372557 - 18372485
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaagg 256  Q
    ||||||| ||||||||||||||||| ||||   |||||||||||||||||| || ||||||||||| ||||||||    
T  18372557 gactcacacttgagggggagtgttgttgtga--aagtgtgagttatatgtcccacatcggataaaatagtaaagg 18372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 18372758 - 18372680
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||| ||||||||  ||  |||||||||| ||||||||||||||| ||||||||| ||||||| |||||||||||    
T  18372758 caagtgtgatttatatgttccatttcggataaaatagtaaaggttgaaca-cttataagtaagaggactcataaacccat 18372680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 3669945 - 3669994
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  3669945 acaagcaacaagtggctccttgtgcaggaacggcgatacatgcaaagtaa 3669994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 4154828 - 4154747
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || ||| |||| || |||  ||||||||||  |||||||| | |||||||||||||    
T  4154828 tgtgtgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataagtgaaaggacccataaac 4154747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 18380171 - 18380095
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    |||||||||||||| || || |||| |||||| ||||||||||||||| ||||||||| || || || |||||||||    
T  18380171 agtgtgagttatatatcccacatcgaataaaatagtaaaggttgaacaccttataagtaagggggcctataaaccca 18380095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 40518065 - 40518160
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaaga--gtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||||||||  || || |||||||| |  |||||||||||||| ||||||||| |  |||||||||||||||  |||||||    
T  40518065 tgtgttcaagtgtgagttatatgttccacattggataaaaaaaagtaaaggttgaacaccttataagtaaatggacccataaacccaatgccttaa 40518160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 43398225 - 43398161
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    |||||||||||||| ||||| |||||||| || ||||||||||||||| ||||||| | ||||||    
T  43398225 agtgtgagttatatatctcatatcggatagaaaagtaaaggttgaacaccttataaataagagga 43398161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 20995563 - 20995508
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||  ||||||||||    
T  20995563 tgtgtgcaagtgtgagttatatgtctcacatcagataaaaaagtggaggttgaaca 20995508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 32305503 - 32305558
Alignment:
Q  238 tcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||| ||||||||||||||| ||||||||| ||| |||| ||||||||||    
T  32305503 tcggataaaatagtaaaggttgaacaccttataagtaagaagacctataaacccat 32305558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 6651510 - 6651552
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaa 261  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  6651510 gtgagttatatgtctcacatcggataaaatagtaaaggttgaa 6651552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 3037865 - 3037785
Alignment:
Q  215 aagtgtgagttatatgtct--caaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||| | |  || ||||||| ||| |||||| |||||||| ||||||||| ||||||| |||||||||||    
T  3037865 aagtgtgagttatatatgttccacatcggatgaaatagtaaatgttgaacaccttataagtaagaggactcataaacccat 3037785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 303
Target Start/End: Complemental strand, 4154467 - 4154348
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||   ||| ||||||||| |||||||||||||||  | ||| |||| || |||  ||||||||||  |||||||| ||| |||    
T  4154467 gactcacacttgagggggaaa-ttgttgtgtgcaaatgtgagttatatgtcctacatcagatagaaaagtggaggttgaacactttataagtgaga-gac 4154370  T
Q  282 ccataaacccatagccttaata 303  Q
    |||||||| ||| |||||||||    
T  4154369 ccataaactcattgccttaata 4154348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 9507773 - 9507863
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtct--caaatcggataaaag---agtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||||||| ||   || || |||||||||   ||||||||||||| | ||||||||| ||||||| |||||||||||    
T  9507773 tgtgtgcaagtgtgagttatatctcctccatattggataaaagtacagtaaaggttgaataccttataagtaagaggactcataaacccat 9507863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 18645749 - 18645713
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    |||||||||||||||||||||||||||| ||||||||    
T  18645749 tgtgtgcaagtgtgagttatatgtctcacatcggata 18645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 18372122 - 18372075
Alignment:
Q  242 ataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| ||||||||||||||| ||||||||| |||||| ||||||||    
T  18372122 ataaaatagtaaaggttgaacaccttataagtaagaggatccataaac 18372075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 1014144 - 1014095
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||| ||||||||| ||||||||| |||| | |||||||||||||||    
T  1014144 acaagcagcaagtggctccttgtgcaggaacgacgatacatgcaaagtaa 1014095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 12283869 - 12283934
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagt 273  Q
    ||||||||||||| ||||||||||| ||  || ||||||| |||||| |||||| |||||| ||||    
T  12283869 tgtgtgcaagtgtaagttatatgtcccacgtcagataaaaaagtaaatgttgaatatcttaaaagt 12283934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 43274755 - 43274702
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctca 235  Q
    ||||||| ||||||||  ||||||| ||||| |||||||||||||||| |||||    
T  43274755 gactcacacttgagggacagtgttgttgtgtacaagtgtgagttatatatctca 43274702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 6e-35; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 110 - 301
Target Start/End: Original strand, 4823541 - 4823744
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccactctaggggagc--------------gactcacgcttgag 195  Q
    ||||||||||||||||| ||||||||| || ||| |||||||||||||||||||||||| ||||||||||||              ||||||| |||||     
T  4823541 acaagcaacaagtggctccttgtgcaggaatggcgatacatgcaaagtaaaaagcttccgctctaggggagcacgttaaagtgatggactcacacttgaa 4823640  T
Q  196 ggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatag 295  Q
    |||||||||||  || ||||||||||||||||| |||||| ||||||||||| |||||| ||| |||| |||||||||  |||||||||||||| ||| |    
T  4823641 ggggagtgttg--gtttgcaagtgtgagttataagtctcacatcggataaaatagtaaaagttaaacaccttataagtaggaggacccataaactcattg 4823738  T
Q  296 ccttaa 301  Q
    ||||||    
T  4823739 ccttaa 4823744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 15773162 - 15773281
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||||||| |||||||    
T  15773162 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagaggac 15773261  T
Q  282 ccataaacccatagccttaa 301  Q
     ||||| | ||| |||||||    
T  15773262 tcataagctcattgccttaa 15773281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 54018004 - 54017896
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||||  | ||||||||||||||||||||||||||| ||||||||| |||||||    
T  54018004 gactcacacttgagggggagtattgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggac 54017905  T
Q  282 ccataaacc 290  Q
     ||||||||    
T  54017904 tcataaacc 54017896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 22304541 - 22304658
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || |||||||||||| |||||||| || ||||||||||| ||||||||||||| | ||||||||| |||||||    
T  22304541 gactcacacttgagggggagtgttg--gtttgcaagtgtgagctatatgtcccacatcggataaaatagtaaaggttgaataccttataagtaagaggac 22304638  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||| ||| |||||||    
T  22304639 ccataaacacattgccttaa 22304658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 31190007 - 31190091
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    ||||| ||||||||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31190007 tgttgttgtgtgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggacccata 31190091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 29645070 - 29644979
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||| ||||||||||| || |||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  29645070 tgttgttgtgtgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaacccat 29644979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 37990827 - 37990708
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||||  |||||||||||||||| ||||| ||||||||||||||||||  || ||||||||||| |||||| |||||||| ||||||||| |||||||    
T  37990827 gactcacagttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggac 37990728  T
Q  282 ccataaacccatagccttaa 301  Q
     ||||||| ||| |||||||    
T  37990727 tcataaactcattgccttaa 37990708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 29644756 - 29644658
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||| ||||  ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  29644756 gggggaatgtttttgtgtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaacccataaacccat 29644658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 35946518 - 35946611
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| | |||||||    
T  35946518 tgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaacccgttgccttaa 35946611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 15772851 - 15772931
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  15772851 gtgtgcaagtgtgagttatatgtcccatatcggataaaagagtaaatgttgaacaccttataagtaagaggacccataaac 15772931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 37991146 - 37991046
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctta 300  Q
    |||||| ||||| |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||| |||||||| |||||| ||| ||||||    
T  37991146 gtgttgttgtgtacaagtgtgagttatatgtctcacattggataaaatagtaaaggttgaacaccttataagtaagaggacctataaactcatcgcctta 37991047  T
Q  301 a 301  Q
    |    
T  37991046 a 37991046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 25739593 - 25739506
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||||| |||||||||||||||    
T  25739593 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaac 25739506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 42342556 - 42342465
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||||||||||||||| || ||| |||||||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  42342556 tgttgttgtgtgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaatccat 42342465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 49336855 - 49336756
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| ||||||||||||| |||||||| |||||||| || |||||||||||| || ||||||||| ||||||||||||||||||||| |||||    
T  49336855 tgttgttgtgtacaagtgtgagttacatgtctcacatcggatagaaaagtaaaggttgaccaccttataagtaagaggacccataaacccatagtcttaa 49336756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 41359949 - 41359834
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||||    | || |||||||| || ||||||||||||| | ||||||||| |||||||    
T  41359949 gactcacacttaagggggagtgttgttgtgtgcaagtgtgagttat----cccacatcggatacaatagtaaaggttgaataccttataagtaagaggac 41359854  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||||||| |||||||    
T  41359853 ccataaacccattgccttaa 41359834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 8327900 - 8327981
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||||||||||| |||| ||||||||||    
T  8327900 tgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaacccataaac 8327981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 21832528 - 21832412
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||| ||||||||    ||||||||||||||||||||||| || || ||||| || ||||||||||||||| ||||||||| |||||||    
T  21832528 gactcacacttgaggcggagtgtta---tgtgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagaggac 21832432  T
Q  282 ccataaacccatagccttaa 301  Q
     ||||||| |||||||||||    
T  21832431 tcataaactcatagccttaa 21832412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 32462747 - 32462638
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagt-aaaggttgaacatcttataagttagagga 280  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || |||| || ||||||| |||||||||||| ||||||||| ||| ||    
T  32462747 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcgaatgaaagagtaaaaggttgaacaccttataagtaagatga 32462648  T
Q  281 cccataaacc 290  Q
     |||||||||    
T  32462647 tccataaacc 32462638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 33803414 - 33803329
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||| ||||||||||||||| || ||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||    
T  33803414 tgtgtgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccat 33803329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 39914242 - 39914343
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||| |||| |||||||||| ||||||| | |||||||||||||||| |  |||||||    
T  39914242 tgttgttgtgtgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaacaccttataaataagaggacccataaacctaatgccttaa 39914341  T
Q  302 ta 303  Q
    ||    
T  39914342 ta 39914343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 51886561 - 51886638
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  51886561 tgcaagtgtgagttatatgtctcacatcgaataaaatagtaaaggttgaacatcatataagtaagaggacccataaac 51886638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 201 - 293
Target Start/End: Original strand, 25755383 - 25755475
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||| ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||||| ||||||| |||||| ||||    
T  25755383 gtgttgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaatccat 25755475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 43346960 - 43346860
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctta 300  Q
    |||||| ||||| ||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||| ||| ||||||    
T  43346960 gtgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattgcctta 43346861  T
Q  301 a 301  Q
    |    
T  43346860 a 43346860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 122 - 301
Target Start/End: Original strand, 11661846 - 11662040
Alignment:
Q  122 tggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccactctagg-ggagc--------------gactcacgcttgagggggagtgttg 206  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||              ||||||| |||  ||||||||||||    
T  11661846 tggctccttgtgcagcaacggcgatacatgcaaagtaaaaagcttccgctctaggaggagcacgataaagtgatggactcacacttttgggggagtgttg 11661945  T
Q  207 ctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
     ||| || |||||||||||| ||| | || || |||||||||||||||||||||||| |||| |||| ||||| | |||||||| || |||||||    
T  11661946 ttgtatgtaagtgtgagttaaatgccccacattggataaaagagtaaaggttgaacaccttaaaagtgagaggcctcataaaccaattgccttaa 11662040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 12114730 - 12114639
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||| |||||||| || || |||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||    
T  12114730 tgttgttgtgtgcaagtgtaagttatatatcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccat 12114639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 42342278 - 42342159
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||| | ||||||  || |||||||||||||||||| ||| ||   ||||||||| |||||||    
T  42342278 gactcacacttgagggggagtgttgttgtgtgcaagtgtgattcatatgttccacatcggataaaagagtaaatgttcaatgccttataagtaagaggac 42342179  T
Q  282 ccataaacccatagccttaa 301  Q
     ||||||| ||| |||||||    
T  42342178 tcataaactcattgccttaa 42342159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 52634666 - 52634764
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||  ||||||||| ||| ||||||||||||||| |||||||    
T  52634666 tgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaaga-gacccataaacccattgccttaa 52634764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 221 - 301
Target Start/End: Complemental strand, 39935104 - 39935024
Alignment:
Q  221 gagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||  | ||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||||    
T  39935104 gagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaa 39935024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 54018358 - 54018278
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||||||||||||    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  54018358 tgtgcaagtgtgagttatatgtcctgcatcggataaaagagtaaagattgaacaccttataagtaagaggacccataaacc 54018278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 32589694 - 32589792
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||||||| ||||||| || ||  ||||||| | ||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  32589694 tgttgttgtgtgcaagtgtgagt-atatgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 32589792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 53118142 - 53118044
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| |||| |||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||| ||||||  || |||||||| |||||||    
T  53118142 tgttgttgtgggcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtgagaggattca-aaacccattgccttaa 53118044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 53577354 - 53577441
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| || | || ||| ||||||||    
T  53577354 tgttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaacatcttaaaaataagtggatccataaac 53577441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 22304218 - 22304297
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  22304218 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 22304297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 32463070 - 32462969
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagt-aaaggttgaacatcttataagttagaggacccataaacccatagcctt 299  Q
    |||||| ||||| ||||||||||||||||||| || |||||||| |||||| |||||||||| | ||||||||| ||| ||| ||||||||||| |||||    
T  32463070 gtgttgttgtgtacaagtgtgagttatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaacccattgcctt 32462971  T
Q  300 aa 301  Q
    ||    
T  32462970 aa 32462969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 39389070 - 39389151
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||||||  | ||||||||||| ||||||||||||||| |||| || | |||||||||||||||||||    
T  39389070 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttaaaactaagaggacccataaacccat 39389151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 45901702 - 45901803
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaag-agtaaaggttgaacatcttataagttagaggacccataaacccatagcctt 299  Q
    |||||| ||||| ||||||||||||||||||| || |||||||||||| |  |||||||||||| ||||||||| ||||||| ||||||| ||| |||||    
T  45901702 gtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaagaggacgcataaactcatggcctt 45901801  T
Q  300 aa 301  Q
    ||    
T  45901802 aa 45901803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 1634483 - 1634391
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggata-aaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||| |  ||||||| ||||  |||||||| |||||||||||||||||||    
T  1634483 tgttgctgtgtgcaagtgtgagttatatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaacccat 1634391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 50612610 - 50612534
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| ||||||| ||||||| ||||||||| ||||||| ||||||    
T  50612610 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataaa 50612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 33175826 - 33175747
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataa 287  Q
    ||||| |||||||||||||||||||||| ||| |||| || ||||||||||||||| ||||||||| |||| ||||||||    
T  33175826 tgtgtacaagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataagtaagagaacccataa 33175747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 302
Target Start/End: Complemental strand, 45395815 - 45395721
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaat 302  Q
    ||||||||||||| |||||||| || || |||| ||||||||||||||||| ||||  |||||||| |||||| |||||||||||| | ||||||    
T  45395815 tgtgtgcaagtgtaagttatatatcccacatcgaataaaagagtaaaggttaaacacgttataagtaagaggatccataaacccattgtcttaat 45395721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 9240122 - 9240230
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||| |||||||||   ||||||||||||||||||||||  || |||||||| |  |||||| | |||||| ||||||||| |||||||    
T  9240122 gactcacacttgaggaggagtgttg---tgtgcaagtgtgagttatatgttccacatcggatagagaagtaaaagctgaacaccttataagtaagaggac 9240218  T
Q  282 ccataaacccat 293  Q
    ||||||| ||||    
T  9240219 ccataaatccat 9240230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 11661525 - 11661602
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagg 279  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| ||||| |||| |||||||||||||| |||||    
T  11661525 tgttggtgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaacggttaaacatcttataagtaagagg 11661602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 22304136 - 22304024
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||| || ||||| ||||| ||||||||||||||||||| || ||| ||||||| ||||||||       |||||||||| || ||||    
T  22304136 gactcacacttgagggagaatgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaagg-------tcttataagtaagcggac 22304044  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||||||| |||||||    
T  22304043 ccataaacccattgccttaa 22304024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 37726504 - 37726577
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||| | ||||||||| |||||| ||||    
T  37726504 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaatgttgaataccttataagtaagaggatccat 37726577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 43346640 - 43346706
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatctta 268  Q
    ||||| |||||||||||||||||| |||||| || ||||||||||| ||||||||||||||| ||||    
T  43346640 tgttgttgtgtgcaagtgtgagttgtatgtcccacatcggataaaatagtaaaggttgaacacctta 43346706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 3135224 - 3135151
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    |||||||||||||| || ||||||||||| |||||| |||||||| ||||||||| | || |||||||||||||    
T  3135224 gtgagttatatgtcccacatcggataaaatagtaaatgttgaacaccttataagtaaaagaacccataaaccca 3135151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 44160702 - 44160621
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||| |||||||||| ||| || |||||||| | ||||||||||||| ||||||| | |||||| ||||||||||||    
T  44160702 tgcaagtgtcagttatatgtttcatattggataaaacaataaaggttgaacaccttataaataagaggatccataaacccat 44160621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 42584970 - 42584902
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||| || |||||||| |||||||||| ||||||| ||||||||| |||||| |||||||||    
T  42584970 agttatatgtcccacatcggatagaagagtaaagattgaacaccttataagtaagaggatccataaacc 42584902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 33362451 - 33362370
Alignment:
Q  215 aagtgtgagttatatg---tctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||   |||||  |||||||||| | ||||||||||| | ||||||||| |||||||||||||||||||    
T  33362451 aagtgtgagttatatgatatctcatgtcggataaaataataaaggttgaataccttataagtaagaggacccataaacccat 33362370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 22303853 - 22303783
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgc-aaagtaaaaagcttccactctagggga 179  Q
    ||||||| |||||||||||||||||||||||||| || || || |||||||||||||||| || |||||||    
T  22303853 acaagcagcaagtggcttcttgtgcagcaacggcgattcaggcaaaagtaaaaagcttccgctttagggga 22303783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 7767476 - 7767391
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||| |||| ||||||||||||| || |||||||| || ||||||||||| |||  |||||| | ||||||| |||||||||||    
T  7767476 tgtgtgtaagtctgagttatatgtcccacatcggatagaaaagtaaaggttggacactttataactaagaggactcataaacccat 7767391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 3135629 - 3135562
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttat 269  Q
    ||||| ||||| ||||||||||||||||||| ||  || |||||||||||||| |||||||| |||||    
T  3135629 tgttgttgtgtacaagtgtgagttatatgtcccacctcagataaaagagtaaaagttgaacaccttat 3135562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 39336391 - 39336310
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || |||||||| ||   |  ||||||||||  |||||||| |||||| ||||||||    
T  39336391 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaagttggaggttgaacactttataagtgagaggatccataaac 39336310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 47965077 - 47964984
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||||||||| | | |||||||| || |||  ||||| |||||  ||||||| ||||| | ||||| ||||| |||||||    
T  47965077 tgtgtgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaacattatataagtgagagggctcataagcccattgccttaa 47964984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 3384427 - 3384347
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||| |||||||||||||| || ||  ||||||| |||| ||||| ||||  |||||||  |||||||||||||||    
T  3384427 gtgtgcaagcgtgagttatatgtcccacatatgataaaacagtataggttaaacactttataaggaagaggacccataaac 3384347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 47964680 - 47964587
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||| |||||| |  |||||||| ||  ||  |||||||||    ||||||| |||||||||||||||| || |||||||    
T  47964680 tgtgtgcaagtgtgagttgtatgtcccgcatcggatagaaatgtggaggttgaacgctatataagtgagaggacccataaacctattgccttaa 47964587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 12747914 - 12747878
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    ||||||||||||||||||||||||| || ||||||||    
T  12747914 tgtgtgcaagtgtgagttatatgtcccacatcggata 12747878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 6e-35; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 15880233 - 15880352
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||| ||||||| ||||| ||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||| |||||||    
T  15880233 gactcacacttaaggggaagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagaggac 15880332  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||||||| |||||||    
T  15880333 ccataaacccattgccttaa 15880352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 37106160 - 37106269
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  37106160 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 37106257  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  37106258 ccataaacccat 37106269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 38796406 - 38796298
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||| |||||||| ||||||||| |||||||    
T  38796406 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataagtaagaggac 38796307  T
Q  282 ccataaacc 290  Q
    | |||||||    
T  38796306 ctataaacc 38796298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 5542811 - 5542694
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || |||| |||||| ||||||||||||||| ||||||||| |||||||    
T  5542811 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccatatcgaataaaatagtaaaggttgaacaccttataagtaagaggac 5542714  T
Q  282 ccataaacccatagccttaa 301  Q
    ||||||||| || |||||||    
T  5542713 ccataaacctattgccttaa 5542694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 31468926 - 31468819
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||||||    |||||||||||||||    
T  31468926 cttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaatatcttata----agaggacccataaac 31468831  T
Q  290 ccatagccttaa 301  Q
     ||| |||||||    
T  31468830 tcattgccttaa 31468819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 36178763 - 36178674
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  36178763 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 36178674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 7598581 - 7598684
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||| ||||||||||  |||||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||||||    
T  7598581 gactcacacttgagagggagtgttg--gtgtgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggac 7598678  T
Q  282 ccataa 287  Q
    ||||||    
T  7598679 ccataa 7598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 14745825 - 14745736
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || || |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  14745825 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 14745736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 28531499 - 28531383
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||   ||||||||||||||||||||||| || |||||||| || || |||||||||||| ||||||||| ||||| |    
T  28531499 gactcacacttgagggggagtgttg---tgtgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagaggtc 28531403  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||| ||| |||||||    
T  28531402 ccataaactcattgccttaa 28531383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 40679814 - 40679698
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||   ||||||| ||||||||||||||| || |||||||| || ||||| ||||||||| ||||||||| |||| ||    
T  40679814 gactcacacttgagggggagtgttg---tgtgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacaccttataagtaagagaac 40679718  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||||||| |||||||    
T  40679717 ccataaacccatcgccttaa 40679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 41283633 - 41283544
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  41283633 tgcaagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaa 41283544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 29676873 - 29676997
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag--- 278  Q
    ||||||| |||||||||| |||||| |||||||| |||||||||||||||| || |||||||||||||||||||||| |||| |||||| || ||||       
T  29676873 gactcacacttgagggggtgtgttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggtttaacaccttataggtgagaggag 29676972  T
Q  279 --gacccataaacccatagccttaa 301  Q
      ||||||||||||||| |||||||    
T  29676973 aagacccataaacccattgccttaa 29676997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 40733487 - 40733595
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||| ||||||  ||||| ||||||||||||||||||| || ||| ||||||| |||||| |||||||| ||||||||| |||||||    
T  40733487 gactcacacttgaggggaagtgttattgtgtacaagtgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagaggac 40733586  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  40733587 ccataaacc 40733595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 209 - 296
Target Start/End: Original strand, 1769889 - 1769976
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagc 296  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| ||||||| ||||||| ||||||    
T  1769889 gtgtgcaagtgtgagttatatgtcacacatcggataaaagagtaaaagttgaacaccttataagtaagaggactcataaactcatagc 1769976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 299
Target Start/End: Original strand, 6421369 - 6421472
Alignment:
Q  196 ggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatag 295  Q
    |||| |||||| ||||  ||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| ||| |    
T  6421369 ggggggtgttgttgtgcacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaactcattg 6421468  T
Q  296 cctt 299  Q
    ||||    
T  6421469 cctt 6421472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 28254405 - 28254306
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||| ||||||| ||||||||| || |||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  28254405 tgttgttgtgtgccagtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaa 28254306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 269
Target Start/End: Complemental strand, 36785751 - 36785664
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttat 269  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||    
T  36785751 gactcacactttagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttat 36785664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 200 - 290
Target Start/End: Original strand, 6712964 - 6713054
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||| ||| | |||||||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||| ||||||||||||||||    
T  6712964 agtgttgttgtatacaagtgtgagttatatgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaacc 6713054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 962598 - 962679
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||    
T  962598 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaacccat 962679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 38796788 - 38796700
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||||||||||||||||||||||| || ||| ||||||| | ||||||||||||| ||||||||| ||||||||||||||||    
T  38796788 tgttgttgtgtgcaagtgtgagttatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagaggacccataaacc 38796700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 31899594 - 31899496
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctta 300  Q
    ||||| |||||| |||||||||||||||||  || ||||||||||| |||||| |||||||| ||||||||| ||||||||||||||| ||| ||||||    
T  31899594 tgttgttgtgtgaaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaactcattgcctta 31899496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 37632759 - 37632673
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccata 294  Q
    |||||||||||||||||||||||||  | ||||||||||| ||||||||||  |||| |||||||| ||||||||||||||||||||    
T  37632759 tgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagaggacccataaacccata 37632673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 5543156 - 5543067
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||||| ||||||||| || |||||||    
T  5543156 tgcaagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggatccataaacctattgccttaa 5543067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 35580885 - 35580793
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||||| || ||||||||||| | |||| |||||||| ||||||||| |||||| |||||||||||| |||||||    
T  35580885 tgtgtgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagagga-ccataaacccattgccttaa 35580793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 37105924 - 37106013
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||| || |||| |||||| ||||||||||||||| ||||||||| || |||||||||||| ||| |||||||    
T  37105924 tgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaactcattgccttaa 37106013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 40733853 - 40733950
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagg 279  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||||||| || |||| |||||||||||||| || |||| ||||||||| |||||    
T  40733853 gactcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaagatttaacaccttataagtaagagg 40733950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 42514649 - 42514738
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||||||||||  | ||| |||| || ||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  42514649 tgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccatcgccttaa 42514738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 15511661 - 15511572
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||  ||||||||||| || | |||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  15511661 tgttgttgtgtgcaagtg--agttatatgtcacacaacggataaaagagtaaaggttgaacacgttataagtaagaggacccataaacccat 15511572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 16542438 - 16542538
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctta 300  Q
    |||||| ||||||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||||||| | |||||||  |||||| ||| ||||||    
T  16542438 gtgttgttgtgtgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacttataaactcattgcctta 16542537  T
Q  301 a 301  Q
    |    
T  16542538 a 16542538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 33731653 - 33731737
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||| |||||| ||||||||| || |||||||    
T  33731653 gtgtgagttatatatctcacatcggataaaagagtaaaggttgagcaccttataagtaagaggatccataaacctattgccttaa 33731737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 36178455 - 36178346
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||| ||  |||||||||| ||||||||| ||||| ||||||||| || ||||    
T  36178455 gactcacacttgagggggactgttg--gtttgcaagtgtgagttatatgtcccacttcggataaaatagtaaaggtggaacaccttataagtaaggggac 36178358  T
Q  282 ccataaacccat 293  Q
     |||||||||||    
T  36178357 tcataaacccat 36178346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 196 - 301
Target Start/End: Complemental strand, 14745466 - 14745363
Alignment:
Q  196 ggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatag 295  Q
    |||||||||||  || ||||| ||||||||||||||| || |||| |||||| ||||| ||||||||||||| |||||  |||||||||||||||||| |    
T  14745466 ggggagtgttg--gtttgcaactgtgagttatatgtcccacatcgaataaaatagtaatggttgaacatcttgtaagtatgaggacccataaacccattg 14745369  T
Q  296 ccttaa 301  Q
    ||||||    
T  14745368 ccttaa 14745363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 36006047 - 36005949
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| || |||| ||| || |||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  36006047 tgttgttgtgtacaagtgtgagttatatgtcccacatcgaatagaa-agtaaaagttgaacaccttataagtaagaggacccataaactcattgccttaa 36005949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 31259787 - 31259696
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatc---ggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| |||||| ||||| ||||||||||||||| |||   ||||||||||||||||||| |||| ||||||||| ||| ||||||||||||    
T  31259787 tgttgttgtgtgtaagtgcgagttatatgtctcacatcatcggataaaagagtaaaggttcaacaccttataagtaagatgacccataaacc 31259696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 6421289 - 6421352
Alignment:
Q  197 gggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttga 260  Q
    |||||||||| ||||| ||||||| ||||||||||| || ||||||||||||||||||||||||    
T  6421289 gggagtgttgttgtgtacaagtgtaagttatatgtcccacatcggataaaagagtaaaggttga 6421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 29676543 - 29676622
Alignment:
Q  220 tgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctt 299  Q
    |||||||||||||||| || |||||||||||||||| |||||||  |||||||| |||| |||||||||| ||| |||||    
T  29676543 tgagttatatgtctcacattggataaaagagtaaagattgaacacattataagtgagagaacccataaactcattgcctt 29676622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 30313149 - 30313266
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||| ||  ||| |||||||||| ||| ||||||||||||| |||||||| || |||  |||||||||| ||||||||| |||||||    
T  30313149 gactcacacttgaggggaaga-ttgttgtgtgcaagcgtgtgttatatgtctcacatcggatagaaaagtggaggttgaaca-cttataagtgagaggac 30313246  T
Q  282 ccataaacccatagccttaa 301  Q
    ||| |||| ||| |||||||    
T  30313247 ccaaaaactcattgccttaa 30313266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 3673055 - 3673120
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaa 247  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||||| || || ||||||||    
T  3673055 gactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaa 3673120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 5367451 - 5367544
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| |||||||||  |||||||| || |||||||||||||| |||||||||||| ||||||||| ||| || |||| ||| |||| ||||||    
T  5367451 tgtgtacaagtgtgatatatatgtcccagatcggataaaagagcaaaggttgaacaccttataagtaagatgatccatgaacacataaccttaa 5367544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 6422126 - 6422199
Alignment:
Q  228 atgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| || ||| ||||||| |||||||||||||||  |||||| | |||||||||||||||||||||||||||    
T  6422126 atgtcccacatcagataaaaaagtaaaggttgaacacattataattaagaggacccataaacccatagccttaa 6422199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 9231245 - 9231338
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||| |||| |||||||||||||||| ||| |||| || |||||||||||||||| |||||| | |||||| |||| ||||||  |||||||    
T  9231245 tgtgtgtaagtatgagttatatgtctcatatcagatagaaaagtaaaggttgaacatattataaataagaggatccatcaacccaccgccttaa 9231338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 7598225 - 7598317
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||| ||||||||   | |||| ||| || |||||||||| |||| ||||||| | ||||||||||||||| |||||||||||    
T  7598225 gtgtgcaagtgtgaattatatgttctacatcgaatagaaaagtaaaggttcaacaccttataaataagaggacccataaactcatagccttaa 7598317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 23346231 - 23346325
Alignment:
Q  208 tgtgtgcaagtgtgagttata--tgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||| |||||||||||||  ||||||| |||| ||| || |||||||||| |||| ||||||| | ||||| |||||||||||||||||||||    
T  23346231 tgtgtgcgagtgtgagttatatatgtctcacatcgtatagaaaagtaaaggttaaacaccttataa-taagagggcccataaacccatagccttaa 23346325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 36178304 - 36178240
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||| ||||||||||||||| ||||||||| || | |||||||||||||| |||||||    
T  36178304 atcggataaaatagtaaaggttgaacaccttataagtaagggaacccataaacccattgccttaa 36178240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 30323435 - 30323553
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||  ||| |||||||||||||| |||||||||| |||||| |||| || | |  ||||||||||  ||| |||| |||||||    
T  30323435 gactcacacttgagggggaga-ttgttgtgtgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacactttagaagtgagaggac 30323533  T
Q  282 ccataaacccatagccttaa 301  Q
    | |||||| ||| |||||||    
T  30323534 ctataaactcattgccttaa 30323553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 12529195 - 12529097
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||| ||| |||||||||||||||||||||  | |||  |||||| ||||||| ||||||| | ||||||| ||||||| ||||||| ||| |||||||    
T  12529195 gttgttgtatgcaagtgtgagttatatgtcctacatcaaataaaacagtaaagattgaacaccgtataagtaagaggactcataaactcattgccttaa 12529097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 29874188 - 29874092
Alignment:
Q  205 tgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||| |||||||| |||||||||| || ||| |||| || |||  ||||||||||  |||||| |  |||||||||||||||||| |||||||    
T  29874188 tgctgtgtacaagtgtgtgttatatgtcccacatcagatagaaaagtggaggttgaacactttataattgggaggacccataaacccattgccttaa 29874092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 29873724 - 29873606
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||  ||| |||||||||| ||| |||| ||||| || ||| |||| || |||  ||||||||||| ||||||||  ||||||    
T  29873724 gactcacacttgagggggaga-ttgttgtgtgcaagggtgtgttacatgtcccacatcagatagaaaagtggaggttgaacattttataagtgggaggac 29873626  T
Q  282 ccataaacccatagccttaa 301  Q
     ||||||| ||| |||||||    
T  29873625 tcataaactcattgccttaa 29873606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 40163520 - 40163453
Alignment:
Q  223 gttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||| || |||||||| || ||||||||||||||| ||||||||| ||| ||||||| ||||    
T  40163520 gttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccattaacc 40163453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 28254254 - 28254193
Alignment:
Q  228 atgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||| |||||||| || |||||||||||||||  |||||||| ||||||| |||||||    
T  28254254 atgtctcacatcggatagaaaagtaaaggttgaacactttataagtaagaggactcataaac 28254193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 33561613 - 33561532
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||  || ||| |||| || |||  ||||| ||||  |||||||| |||||||||||||||    
T  33561613 tgtgtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagaggacccataaac 33561532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 33953947 - 33953851
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||||||||   ||||||| ||||||||||| ||| || ||| |||| || |||  ||||||||||   ||||||| ||||||||||||||||    
T  33953947 ttgagggggagtgttg---tgtgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacactatataagtgagaggacccataaacc 33953851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 41678554 - 41678447
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatat--gtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagg 279  Q
    ||||||| ||||| |||||||||||   ||||||||||||||||||||  |||||| ||| |||| || ||   ||||| ||||  |||||||| |||||    
T  41678554 gactcacacttgaaggggagtgttg---tgtgcaagtgtgagttatatatgtctcacatcagatagaaaaggggaggttaaacactttataagtgagagg 41678458  T
Q  280 acccataaacc 290  Q
    |||||||||||    
T  41678457 acccataaacc 41678447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 16590884 - 16590972
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggat-aaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||||||||| || |||  || |||| |||||||||||||||      |||| ||||||||||||||| ||| |||||||    
T  16590884 tgtgtgcaagtgtgagttatatgtcccacatcaaataaaaaaagtaaaggttgaaca------aagtaagaggacccataaacacattgccttaa 16590972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 40734251 - 40734298
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtc 232  Q
    |||| ||||||||||||||||  ||||| |||||||||||||||||||    
T  40734251 tcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtc 40734298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 29676787 - 29676844
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttcc 168  Q
    ||||||| ||||||||| |||||||||||||||  ||||| || |||||||||||||||    
T  29676787 acaagcagcaagtggctccttgtgcagcaacggaaatacaagc-aagtaaaaagcttcc 29676844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 14745566 - 14745517
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||||||||||||| ||||||||| |||||| |||||  ||||||||    
T  14745566 acaagcaacaagtggctccttgtgcaggaacggcgatacagacaaagtaa 14745517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 37894854 - 37894761
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||| ||||||||||||||| || || | ||| || |||||||| | || | ||||||||| ||| ||| |||||| |||| |||||||    
T  37894854 tgtgtgcaaatgtgagttatatgtcccacattgaatagaaaagtaaaggctaaaaaccttataagtaagaagactcataaatccattgccttaa 37894761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 37895223 - 37895130
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||| ||| ||||||||||||| || |||||||| || | |||| |||||| | |||| |||| | || || ||||||||||| |||||||    
T  37895223 tgtgtgcgagtttgagttatatgtcccacatcggatagaaaaataaaagttgaaaaccttaaaagtaaaagaacacataaacccattgccttaa 37895130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 31385738 - 31385826
Alignment:
Q  213 gcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    |||||||||||||| | |||| | ||||| || || | |  ||||||| || ||||||||| | ||||||||||||||||| |||||||    
T  31385738 gcaagtgtgagttagaagtctgacatcggttagaaaaatggaggttgagcaccttataagtgaaaggacccataaacccattgccttaa 31385826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 5327 - 5446
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||| |||| ||| ||||||||||||||||||||||||  || |||||||| || ||||||||||||||| ||||||||| |||||||    
T  5327 gactcacacttgagggagagttttgttgtgtgcaagtgtgagttatatgttccacatcggatagaacagtaaaggttgaacaccttataagtaagaggac 5426  T
Q  282 ccataaacccatagccttaa 301  Q
    |||||||||||| |||||||    
T  5427 ccataaacccattgccttaa 5446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 300
Target Start/End: Original strand, 4972 - 5070
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctta 300  Q
    ||||| ||||||||||||||| |||||||||||| |||||| | || |||||||||| || ||||||||||| | | ||||||||||| ||| ||||||    
T  4972 tgttgttgtgtgcaagtgtgaattatatgtctcacatcggagagaacagtaaaggtttaatatcttataagtaaaaagacccataaactcattgcctta 5070  T

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Target: scaffold0391 (Bit Score: 68; Significance: 4e-30; HSPs: 3)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 1294 - 1175
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| || || |||||||||||||||||||||||| ||||||||  | |||||    
T  1294 gactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagaaaaaggac 1195  T
Q  282 ccataaacccatagccttaa 301  Q
     ||||||||||| |||||||    
T  1194 tcataaacccattgccttaa 1175  T

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Target: scaffold0391; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 3173 - 3091
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacat 264  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||||||    
T  3173 gactcacacttgagggggagtgttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacat 3091  T

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Target: scaffold0391; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 301
Target Start/End: Complemental strand, 1802 - 1760
Alignment:
Q  259 gaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||    
T  1802 gaacaccttataagtgagaggacccataaacccattgccttaa 1760  T

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Target: scaffold0702 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 670 - 583
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  670 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 583  T

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Target: scaffold0702; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 315 - 230
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    ||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  315 gggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 230  T

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Target: scaffold0504 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 10267 - 10192
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||| ||||||||| |||||||||||||||    
T  10267 caagtgtgagttatatgtctcacatcggataaaatggtaaaagttgaacaccttataagtaagaggacccataaac 10192  T

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Target: scaffold0027 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 47350 - 47449
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 301  Q
    ||||| ||||||||||||||| ||| |||||||| ||| ||||||| ||||||| ||||||| ||||||||| |||| | |||||||||||| |||||||    
T  47350 tgttgatgtgtgcaagtgtgaattaaatgtctcacatccgataaaatagtaaagtttgaacaccttataagtaagagaatccataaacccattgccttaa 47449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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