View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0498_low_19 (Length: 318)

Name: NF0498_low_19
Description: NF0498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0498_low_19
NF0498_low_19
[»] chr4 (67 HSPs)
chr4 (110-317)||(10246245-10246452)
chr4 (202-293)||(25483326-25483417)
chr4 (182-293)||(49076523-49076634)
chr4 (182-293)||(52884858-52884968)
chr4 (182-289)||(3244530-3244634)
chr4 (190-301)||(39404376-39404487)
chr4 (202-293)||(4955392-4955483)
chr4 (182-287)||(3341098-3341203)
chr4 (110-170)||(10246179-10246239)
chr4 (182-290)||(44620630-44620738)
chr4 (209-293)||(54017670-54017754)
chr4 (202-301)||(10245910-10246008)
chr4 (202-293)||(50002416-50002507)
chr4 (208-301)||(2740696-2740789)
chr4 (212-293)||(41370357-41370438)
chr4 (190-290)||(43174484-43174585)
chr4 (182-278)||(45489421-45489518)
chr4 (202-290)||(1731725-1731813)
chr4 (182-289)||(22028040-22028147)
chr4 (202-293)||(22183339-22183430)
chr4 (215-293)||(50459724-50459802)
chr4 (182-293)||(54108888-54108994)
chr4 (208-286)||(54741260-54741338)
chr4 (200-293)||(36572007-36572100)
chr4 (208-293)||(52884691-52884776)
chr4 (212-293)||(55933199-55933280)
chr4 (208-292)||(3340803-3340887)
chr4 (182-278)||(44621396-44621492)
chr4 (212-292)||(49880160-49880240)
chr4 (202-293)||(36608736-36608827)
chr4 (184-289)||(36629212-36629314)
chr4 (212-293)||(6975531-6975612)
chr4 (213-290)||(16889614-16889691)
chr4 (182-301)||(20826190-20826306)
chr4 (208-289)||(41707543-41707624)
chr4 (212-293)||(50630830-50630911)
chr4 (182-287)||(2741044-2741146)
chr4 (202-289)||(34646728-34646815)
chr4 (202-280)||(4390189-4390267)
chr4 (192-289)||(16888895-16888993)
chr4 (208-290)||(20825832-20825914)
chr4 (210-293)||(49302902-49302987)
chr4 (208-273)||(3700361-3700426)
chr4 (208-289)||(34004663-34004743)
chr4 (208-301)||(49076898-49076990)
chr4 (202-286)||(54017784-54017870)
chr4 (208-294)||(39404014-39404100)
chr4 (194-278)||(44620926-44621011)
chr4 (222-283)||(54343086-54343147)
chr4 (208-260)||(45050597-45050649)
chr4 (203-289)||(51768139-51768225)
chr4 (202-293)||(54936190-54936277)
chr4 (212-289)||(32941202-32941279)
chr4 (212-288)||(54108538-54108612)
chr4 (237-293)||(18932824-18932880)
chr4 (200-289)||(22028448-22028539)
chr4 (202-278)||(44620286-44620362)
chr4 (221-293)||(44620362-44620434)
chr4 (212-263)||(50788088-50788139)
chr4 (227-289)||(45496820-45496882)
chr4 (202-263)||(19504695-19504756)
chr4 (208-289)||(28034225-28034306)
chr4 (208-289)||(39792939-39793020)
chr4 (237-289)||(44621027-44621079)
chr4 (218-290)||(45489792-45489864)
chr4 (235-288)||(39699026-39699079)
chr4 (202-286)||(11348410-11348494)
[»] scaffold0734 (2 HSPs)
scaffold0734 (182-293)||(5747-5858)
scaffold0734 (202-289)||(5386-5473)
[»] chr7 (48 HSPs)
chr7 (182-301)||(7553995-7554114)
chr7 (191-293)||(22566739-22566841)
chr7 (183-293)||(30244241-30244351)
chr7 (202-293)||(7517570-7517661)
chr7 (182-285)||(30255309-30255412)
chr7 (182-282)||(30244671-30244771)
chr7 (182-289)||(37533091-37533196)
chr7 (190-289)||(30245055-30245154)
chr7 (202-293)||(40094851-40094942)
chr7 (200-293)||(1085693-1085786)
chr7 (201-293)||(47129084-47129176)
chr7 (190-285)||(30245472-30245567)
chr7 (202-293)||(16569186-16569277)
chr7 (202-293)||(16596385-16596476)
chr7 (202-293)||(24177425-24177516)
chr7 (202-293)||(41910671-41910762)
chr7 (208-294)||(40230367-40230453)
chr7 (195-289)||(45434619-45434713)
chr7 (208-301)||(8128510-8128603)
chr7 (208-293)||(28301620-28301705)
chr7 (203-280)||(36109007-36109084)
chr7 (182-293)||(14681482-14681591)
chr7 (202-289)||(22567120-22567206)
chr7 (202-293)||(34218111-34218202)
chr7 (210-293)||(36939810-36939893)
chr7 (202-290)||(23457-23545)
chr7 (183-289)||(1085329-1085436)
chr7 (214-289)||(6054562-6054637)
chr7 (202-301)||(45754706-45754804)
chr7 (212-293)||(29157565-29157646)
chr7 (208-293)||(36622956-36623041)
chr7 (202-290)||(36534864-36534952)
chr7 (202-290)||(45433231-45433319)
chr7 (202-293)||(118378-118469)
chr7 (202-289)||(43241485-43241572)
chr7 (219-293)||(11845198-11845272)
chr7 (202-291)||(24838780-24838870)
chr7 (217-300)||(44361534-44361616)
chr7 (215-289)||(9901648-9901720)
chr7 (220-293)||(19122740-19122812)
chr7 (217-301)||(30032572-30032656)
chr7 (215-293)||(37533441-37533519)
chr7 (208-262)||(40094502-40094556)
chr7 (202-255)||(36967344-36967397)
chr7 (208-272)||(41854631-41854694)
chr7 (215-281)||(20599317-20599383)
chr7 (133-179)||(37533213-37533259)
chr7 (185-229)||(48243218-48243262)
[»] chr1 (57 HSPs)
chr1 (182-301)||(34364895-34365014)
chr1 (182-293)||(44290535-44290644)
chr1 (182-301)||(37556081-37556200)
chr1 (182-289)||(26661603-26661710)
chr1 (182-293)||(41157345-41157456)
chr1 (182-291)||(3537226-3537333)
chr1 (182-289)||(22077576-22077680)
chr1 (201-301)||(34364496-34364596)
chr1 (202-293)||(41184502-41184593)
chr1 (183-290)||(11977251-11977358)
chr1 (208-293)||(17294573-17294658)
chr1 (212-293)||(44290902-44290983)
chr1 (202-294)||(21378117-21378209)
chr1 (210-293)||(41142370-41142453)
chr1 (202-289)||(41156981-41157068)
chr1 (215-290)||(50052103-50052178)
chr1 (208-294)||(22077904-22077990)
chr1 (208-287)||(45084378-45084457)
chr1 (213-293)||(3550721-3550801)
chr1 (202-290)||(26661978-26662066)
chr1 (202-290)||(31767241-31767329)
chr1 (202-290)||(37850680-37850768)
chr1 (222-289)||(5528835-5528902)
chr1 (202-293)||(29798189-29798280)
chr1 (214-301)||(38804424-38804511)
chr1 (182-288)||(48588570-48588674)
chr1 (208-289)||(66553-66634)
chr1 (208-293)||(3875408-3875493)
chr1 (212-301)||(5320034-5320123)
chr1 (208-289)||(24600395-24600476)
chr1 (212-289)||(32594797-32594874)
chr1 (182-290)||(66167-66274)
chr1 (214-290)||(34649440-34649516)
chr1 (203-280)||(40082398-40082475)
chr1 (212-293)||(41759483-41759564)
chr1 (217-293)||(3537676-3537752)
chr1 (201-288)||(39066282-39066369)
chr1 (208-302)||(44685452-44685547)
chr1 (182-289)||(30630719-30630823)
chr1 (202-259)||(35154150-35154207)
chr1 (218-294)||(5575110-5575186)
chr1 (208-289)||(1187445-1187526)
chr1 (208-293)||(22793274-22793359)
chr1 (110-159)||(26661748-26661797)
chr1 (220-288)||(14318875-14318943)
chr1 (208-278)||(4878799-4878869)
chr1 (239-289)||(4956218-4956268)
chr1 (216-285)||(9955911-9955981)
chr1 (235-289)||(22077191-22077245)
chr1 (208-289)||(1188669-1188750)
chr1 (212-289)||(24132066-24132143)
chr1 (192-263)||(50469188-50469256)
chr1 (190-244)||(22077248-22077299)
chr1 (212-263)||(45494085-45494137)
chr1 (215-282)||(37555733-37555800)
chr1 (182-244)||(50051777-50051837)
chr1 (249-293)||(44043849-44043893)
[»] scaffold0171 (1 HSPs)
scaffold0171 (182-301)||(17525-17644)
[»] chr2 (57 HSPs)
chr2 (182-301)||(37106160-37106277)
chr2 (182-290)||(38796298-38796406)
chr2 (182-293)||(15880233-15880344)
chr2 (182-290)||(5542705-5542811)
chr2 (182-287)||(7598581-7598684)
chr2 (190-272)||(31468844-31468926)
chr2 (212-293)||(36178682-36178763)
chr2 (182-290)||(40733487-40733595)
chr2 (182-269)||(36785664-36785751)
chr2 (200-290)||(6712964-6713054)
chr2 (182-280)||(29676873-29676971)
chr2 (212-293)||(962598-962679)
chr2 (209-294)||(1769889-1769974)
chr2 (196-289)||(6421369-6421462)
chr2 (212-293)||(14745744-14745825)
chr2 (182-289)||(28531395-28531499)
chr2 (182-293)||(40679706-40679814)
chr2 (212-289)||(41283556-41283633)
chr2 (202-290)||(38796700-38796788)
chr2 (202-289)||(28254318-28254405)
chr2 (208-294)||(37632673-37632759)
chr2 (182-279)||(40733853-40733950)
chr2 (202-293)||(15511572-15511661)
chr2 (182-293)||(36178346-36178455)
chr2 (202-289)||(31899507-31899594)
chr2 (212-290)||(5543078-5543156)
chr2 (217-290)||(33731653-33731726)
chr2 (208-293)||(35580801-35580885)
chr2 (212-289)||(37105924-37106001)
chr2 (212-293)||(42514649-42514730)
chr2 (201-281)||(16542438-16542518)
chr2 (196-293)||(14745371-14745466)
chr2 (202-290)||(31259696-31259787)
chr2 (197-260)||(6421289-6421352)
chr2 (202-289)||(36005961-36006047)
chr2 (182-247)||(3673055-3673120)
chr2 (208-301)||(5367451-5367544)
chr2 (220-289)||(29676543-29676612)
chr2 (208-292)||(9231245-9231329)
chr2 (182-289)||(30313149-30313254)
chr2 (228-301)||(6422126-6422199)
chr2 (209-301)||(7598225-7598317)
chr2 (208-301)||(23346231-23346325)
chr2 (237-293)||(36178248-36178304)
chr2 (182-289)||(30323435-30323541)
chr2 (223-290)||(40163453-40163520)
chr2 (203-289)||(12529109-12529195)
chr2 (228-289)||(28254193-28254254)
chr2 (208-289)||(33561532-33561613)
chr2 (191-290)||(33953851-33953947)
chr2 (182-290)||(41678447-41678554)
chr2 (205-293)||(29874100-29874188)
chr2 (182-289)||(29873618-29873724)
chr2 (185-232)||(40734251-40734298)
chr2 (110-168)||(29676787-29676844)
chr2 (110-159)||(14745517-14745566)
chr2 (208-263)||(16590884-16590940)
[»] chr8 (67 HSPs)
chr8 (182-301)||(30359579-30359698)
chr8 (182-289)||(9309325-9309432)
chr8 (202-301)||(30359261-30359360)
chr8 (190-289)||(34835187-34835286)
chr8 (182-290)||(8918844-8918952)
chr8 (201-290)||(8794100-8794189)
chr8 (208-289)||(45122138-45122219)
chr8 (190-290)||(45122984-45123082)
chr8 (182-301)||(3670032-3670149)
chr8 (190-293)||(9482681-9482782)
chr8 (182-284)||(18372342-18372442)
chr8 (219-292)||(70352-70425)
chr8 (208-301)||(1513984-1514077)
chr8 (208-293)||(9608741-9608826)
chr8 (208-293)||(41972154-41972239)
chr8 (202-290)||(147441-147529)
chr8 (182-293)||(1013948-1014057)
chr8 (182-289)||(34835444-34835552)
chr8 (182-289)||(34835710-34835818)
chr8 (182-290)||(45121736-45121843)
chr8 (202-293)||(3038367-3038458)
chr8 (214-289)||(25561897-25561972)
chr8 (182-263)||(147799-147880)
chr8 (208-293)||(9308973-9309060)
chr8 (233-293)||(9483264-9483324)
chr8 (182-292)||(40518555-40518662)
chr8 (202-290)||(43274859-43274947)
chr8 (202-289)||(33113448-33113535)
chr8 (210-284)||(18372785-18372859)
chr8 (212-289)||(3669687-3669764)
chr8 (212-293)||(5420651-5420732)
chr8 (212-292)||(20870651-20870733)
chr8 (214-289)||(40579587-40579662)
chr8 (219-290)||(41416251-41416322)
chr8 (210-289)||(45121991-45122070)
chr8 (201-286)||(6876946-6877032)
chr8 (212-289)||(1014326-1014403)
chr8 (201-289)||(34834865-34834953)
chr8 (182-293)||(18371737-18371842)
chr8 (182-289)||(18373012-18373118)
chr8 (217-300)||(20130454-20130536)
chr8 (222-285)||(25561729-25561792)
chr8 (214-293)||(37544567-37544646)
chr8 (215-264)||(32640633-32640682)
chr8 (182-261)||(6731876-6731953)
chr8 (212-293)||(30441081-30441166)
chr8 (237-289)||(45122649-45122701)
chr8 (182-256)||(18372485-18372557)
chr8 (214-293)||(18372680-18372758)
chr8 (110-159)||(3669945-3669994)
chr8 (208-289)||(4154747-4154828)
chr8 (249-302)||(9609122-9609175)
chr8 (208-289)||(9620757-9620838)
chr8 (216-292)||(18380095-18380171)
chr8 (216-280)||(43398161-43398225)
chr8 (208-263)||(20995508-20995563)
chr8 (238-293)||(32305503-32305558)
chr8 (208-292)||(40518065-40518151)
chr8 (219-261)||(6651510-6651552)
chr8 (215-293)||(3037785-3037865)
chr8 (208-293)||(9507773-9507863)
chr8 (208-244)||(18645713-18645749)
chr8 (242-289)||(18372075-18372122)
chr8 (110-159)||(1014095-1014144)
chr8 (182-303)||(4154348-4154467)
chr8 (208-273)||(12283869-12283934)
chr8 (182-235)||(43274702-43274755)
[»] chr6 (39 HSPs)
chr6 (182-301)||(2578512-2578630)
chr6 (182-293)||(29518892-29519001)
chr6 (182-293)||(16108033-16108144)
chr6 (202-301)||(2579941-2580040)
chr6 (182-293)||(3409632-3409741)
chr6 (195-293)||(2378111-2378207)
chr6 (212-293)||(29518503-29518584)
chr6 (212-293)||(32741179-32741260)
chr6 (212-293)||(35210204-35210285)
chr6 (202-290)||(593789-593877)
chr6 (214-293)||(2377756-2377835)
chr6 (182-294)||(2579185-2579293)
chr6 (191-290)||(16454886-16454985)
chr6 (212-292)||(26544049-26544129)
chr6 (202-293)||(16107668-16107759)
chr6 (212-289)||(3409259-3409336)
chr6 (190-293)||(10074068-10074168)
chr6 (182-289)||(10074444-10074548)
chr6 (212-289)||(14748419-14748496)
chr6 (218-289)||(9062430-9062501)
chr6 (202-293)||(16454565-16454656)
chr6 (214-288)||(5832108-5832182)
chr6 (212-293)||(1846748-1846829)
chr6 (215-288)||(1950267-1950340)
chr6 (212-293)||(3058226-3058307)
chr6 (217-293)||(32460657-32460733)
chr6 (212-293)||(1127360-1127441)
chr6 (216-293)||(3415462-3415539)
chr6 (208-289)||(10073697-10073776)
chr6 (209-289)||(5958684-5958764)
chr6 (215-289)||(6999877-6999951)
chr6 (212-289)||(10911565-10911643)
chr6 (218-283)||(2843560-2843625)
chr6 (185-289)||(2578916-2579016)
chr6 (182-289)||(2579573-2579677)
chr6 (182-289)||(8481898-8482003)
chr6 (208-289)||(6071128-6071209)
chr6 (249-290)||(14789284-14789325)
chr6 (237-285)||(35210503-35210551)
[»] chr5 (56 HSPs)
chr5 (182-293)||(26074582-26074693)
chr5 (182-290)||(26074862-26074970)
chr5 (202-293)||(26075239-26075330)
chr5 (182-290)||(13415840-13415947)
chr5 (202-301)||(15370089-15370188)
chr5 (202-293)||(40296392-40296483)
chr5 (182-293)||(3295092-3295204)
chr5 (183-293)||(26074223-26074330)
chr5 (208-292)||(41632778-41632862)
chr5 (202-301)||(299479-299578)
chr5 (202-289)||(6224186-6224273)
chr5 (202-289)||(36492298-36492385)
chr5 (218-293)||(41170640-41170715)
chr5 (202-293)||(12662729-12662820)
chr5 (214-293)||(18603197-18603276)
chr5 (212-293)||(9498731-9498812)
chr5 (212-293)||(32487394-32487474)
chr5 (208-293)||(35150003-35150087)
chr5 (182-289)||(6500795-6500899)
chr5 (185-299)||(624171-624283)
chr5 (212-290)||(27502116-27502194)
chr5 (208-301)||(1028586-1028679)
chr5 (212-293)||(6500451-6500531)
chr5 (208-293)||(36568644-36568729)
chr5 (202-293)||(11417054-11417143)
chr5 (202-290)||(25327925-25328013)
chr5 (202-293)||(35914839-35914930)
chr5 (208-290)||(3295424-3295505)
chr5 (202-290)||(42405676-42405764)
chr5 (182-289)||(31509594-31509700)
chr5 (182-301)||(15370384-15370491)
chr5 (214-292)||(26074320-26074398)
chr5 (202-288)||(35167920-35168006)
chr5 (208-293)||(42508608-42508693)
chr5 (217-285)||(38427553-38427620)
chr5 (212-263)||(623818-623869)
chr5 (182-293)||(24489283-24489389)
chr5 (208-294)||(39309680-39309765)
chr5 (214-287)||(7768852-7768925)
chr5 (212-289)||(29549336-29549413)
chr5 (201-254)||(35150736-35150789)
chr5 (201-254)||(35151027-35151080)
chr5 (202-290)||(34753105-34753193)
chr5 (191-293)||(36522314-36522413)
chr5 (182-247)||(13785732-13785794)
chr5 (202-293)||(41635268-41635359)
chr5 (214-293)||(42524719-42524797)
chr5 (208-278)||(300955-301025)
chr5 (212-285)||(5723876-5723949)
chr5 (182-290)||(36521976-36522081)
chr5 (215-289)||(2411010-2411084)
chr5 (111-164)||(795196-795249)
chr5 (215-272)||(6225047-6225104)
chr5 (110-159)||(9498507-9498556)
chr5 (224-289)||(33747783-33747848)
chr5 (212-288)||(26590992-26591068)
[»] chr3 (56 HSPs)
chr3 (182-287)||(15773162-15773267)
chr3 (182-290)||(54017896-54018004)
chr3 (110-289)||(4823541-4823732)
chr3 (202-286)||(31190007-31190091)
chr3 (202-293)||(29644979-29645070)
chr3 (195-293)||(29644658-29644756)
chr3 (209-289)||(15772851-15772931)
chr3 (182-289)||(22304541-22304646)
chr3 (202-289)||(25739506-25739593)
chr3 (208-291)||(35946518-35946601)
chr3 (182-289)||(37990720-37990827)
chr3 (202-293)||(42342465-42342556)
chr3 (208-289)||(8327900-8327981)
chr3 (182-290)||(32462638-32462747)
chr3 (208-293)||(33803329-33803414)
chr3 (212-289)||(51886561-51886638)
chr3 (201-293)||(25755383-25755475)
chr3 (201-289)||(37991058-37991146)
chr3 (202-290)||(39914242-39914330)
chr3 (202-294)||(49336763-49336855)
chr3 (202-293)||(12114639-12114730)
chr3 (182-293)||(41359842-41359949)
chr3 (182-301)||(21832412-21832528)
chr3 (122-290)||(11661846-11662029)
chr3 (201-289)||(43346872-43346960)
chr3 (210-290)||(54018278-54018358)
chr3 (182-289)||(42342171-42342278)
chr3 (202-293)||(52634666-52634756)
chr3 (202-289)||(53577354-53577441)
chr3 (182-263)||(22304218-22304297)
chr3 (202-280)||(53118064-53118142)
chr3 (212-293)||(39389070-39389151)
chr3 (202-293)||(1634391-1634483)
chr3 (221-293)||(39935032-39935104)
chr3 (212-288)||(50612534-50612610)
chr3 (202-293)||(32589694-32589784)
chr3 (208-287)||(33175747-33175826)
chr3 (182-293)||(9240122-9240230)
chr3 (202-279)||(11661525-11661602)
chr3 (201-293)||(32462977-32463070)
chr3 (212-285)||(37726504-37726577)
chr3 (208-293)||(45395730-45395815)
chr3 (201-289)||(45901702-45901791)
chr3 (215-301)||(33362362-33362451)
chr3 (202-268)||(43346640-43346706)
chr3 (219-292)||(3135151-3135224)
chr3 (182-293)||(22304032-22304136)
chr3 (212-293)||(44160621-44160702)
chr3 (222-290)||(42584902-42584970)
chr3 (110-179)||(22303783-22303853)
chr3 (208-293)||(7767391-7767476)
chr3 (202-269)||(3135562-3135629)
chr3 (208-289)||(39336310-39336391)
chr3 (209-289)||(3384347-3384427)
chr3 (208-293)||(47964992-47965077)
chr3 (208-244)||(12747878-12747914)
[»] scaffold0078 (2 HSPs)
scaffold0078 (182-293)||(5327-5438)
scaffold0078 (202-289)||(4972-5059)
[»] scaffold0391 (2 HSPs)
scaffold0391 (182-293)||(1183-1294)
scaffold0391 (182-264)||(3091-3173)
[»] scaffold0702 (2 HSPs)
scaffold0702 (214-293)||(591-670)
scaffold0702 (195-282)||(230-315)
[»] scaffold0504 (1 HSPs)
scaffold0504 (214-289)||(10192-10267)
[»] scaffold0027 (1 HSPs)
scaffold0027 (202-293)||(47350-47441)


Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 110 - 317
Target Start/End: Original strand, 10246245 - 10246452
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccactctaggggagcgactcacgcttgagggggagtgttgctg 209  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  10246245 acaagcaacaagtggcttcttgtgcagcaatggctatacatgcaaagtaaaaagcttccactctaggggagcgactcacgcttgagggggagtgctgttg 10246344  T
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaatactgtcc 309  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10246345 tgtgcaagtgtctgttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaatactgtcc 10246444  T
Q  310 tttttgca 317  Q
    ||||||||    
T  10246445 tttttgca 10246452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 25483326 - 25483417
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||    
T  25483326 tgttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagaggatccataaacccat 25483417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 49076634 - 49076523
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||||  || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  49076634 gactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacaccttataagtaagaggac 49076535  T
Q  282 ccataaacccat 293  Q
    | ||||||||||    
T  49076534 ctataaacccat 49076523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 52884858 - 52884968
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||     
T  52884858 gactcacacttgagggg-agtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggat 52884956  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  52884957 ccataaacccat 52884968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 3244634 - 3244530
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||||||| |||| ||||||||   |||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||| |||||||    
T  3244634 gactcacgcttaagggagagtgttg---tgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagaggac 3244538  T
Q  282 ccataaac 289  Q
    ||||||||    
T  3244537 ccataaac 3244530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 39404376 - 39404487
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||| || ||| ||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  39404376 cttgaggaggagtgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagaggacccataaac 39404475  T
Q  290 ccatatccttaa 301  Q
    | ||| ||||||    
T  39404476 ctatagccttaa 39404487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 4955483 - 4955392
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||| ||||||| |||||||||||    
T  4955483 tgttgttgtgtgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagaggactcataaacccat 4955392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 3341098 - 3341203
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||  |||||||| ||||||||||||||||||||||||| || || ||||||||||||||||||| ||||  |||||||| |||||||    
T  3341098 gactcacacttgaggcagagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactttataagtaagaggac 3341197  T
Q  282 ccataa 287  Q
    ||||||    
T  3341198 ccataa 3341203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 10246179 - 10246239
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccac 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10246179 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccac 10246239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 44620630 - 44620738
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||| ||||||| | ||||||||||||||||||||||||| || ||||||| ||| |||| ||||||||||  |||||||| |||||||    
T  44620630 gactcacacttgaggtggagtgtcgttgtgtgcaagtgtgagttatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagaggac 44620729  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  44620730 ccataaacc 44620738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 54017754 - 54017670
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||||||||| ||  || ||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  54017754 gtgtgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccat 54017670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 10245910 - 10246008
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||| ||||||||||||||||||||||| | || ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||    
T  10245910 tgttgttgtgtgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaagagga-ccataaacccaaagccttaa 10246008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 50002416 - 50002507
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  || ||||| |||||||||||||| ||||    
T  50002416 tgttgttgtttgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccat 50002507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 2740696 - 2740789
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||| |||||||| ||||||||| | ||||||    
T  2740696 tgtgtgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctataaacccagagccttaa 2740789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 41370357 - 41370438
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||| | ||||||||| |||||||||||||||||||    
T  41370357 tgcaagtgtgagttatatgtcccaaatcggataaaatagtaaatgttgaaaaccttataagtaagaggacccataaacccat 41370438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 290
Target Start/End: Original strand, 43174484 - 43174585
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaa-gagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||||||| ||||| ||||||||||||||||| | || ||| ||||||| |||||||||||||||| ||||||||| ||||||| ||||||    
T  43174484 cttgagggggagtgttgttgtgtacaagtgtgagttatatgccacacatcagataaaaagagtaaaggttgaacaccttataagtaagaggacacataaa 43174583  T
Q  289 cc 290  Q
    ||    
T  43174584 cc 43174585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 45489518 - 45489421
Alignment:
Q  182 gactcacgcttgaggggg-agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||||| |||||||||| ||||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| | ||||||| ||||    
T  45489518 gactcacacttgaggggggagtgttgttgtgtacaagtgtgaattatatgtctcacatcggataaaagagtaaaggttgaacaccatataagtaagag 45489421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 1731813 - 1731725
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||||||| ||||||||||||||| || ||| ||||||| ||||||||||||||||||||||| | ||||||||||||||||    
T  1731813 tgttgttgtgtgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaacc 1731725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 22028147 - 22028040
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||| || |||||| ||||||||||||||| ||||||||| || ||||||||||| |  |||||||||||| ||||||||| |||||||    
T  22028147 gactcacacttaaggaggggtgttgttgtgtgcaagtgtgacttatatgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagaggac 22028048  T
Q  282 ccataaac 289  Q
    ||||||||    
T  22028047 ccataaac 22028040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 22183430 - 22183339
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||||||||||||| || || |||||||||||||||||| ||||||||  |||||||| | |||||||||||||||||    
T  22183430 tgttgttgtgtgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaacccat 22183339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 50459724 - 50459802
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||  || ||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  50459724 aagtgtgagttatatgttccacatcggttaaaagagtaaaggttgaacatcttataagtaagaggactcataaacccat 50459802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 54108888 - 54108994
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| |||||||||||||   ||||||||||| ||||||  ||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  54108888 gactcacacttaagggggagtgttg---tgtgcaagtgtcagttat--gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 54108982  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  54108983 ccataaacccat 54108994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 54741338 - 54741260
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    ||||||||||||||| |||||||||||| |||||||| || ||||||||||||||| ||||||||| ||||||||||||    
T  54741338 tgtgtgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccata 54741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 293
Target Start/End: Original strand, 36572007 - 36572100
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||| ||||| ||||||||||||||||||| || |||| ||||||||||||| |||||||| ||||||||| ||| |||||||||| ||||    
T  36572007 agtgttgttgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaatccat 36572100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 52884691 - 52884776
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||| || | ||||||||||    
T  52884691 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagatgatcgataaacccat 52884776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 55933280 - 55933199
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||||||  | ||||||||||| ||||| ||||||||| ||||||||| |||||||||||||||||||    
T  55933280 tgcaagtgtgagttatatgtcctacatcggataaaatagtaagggttgaacaccttataagtaagaggacccataaacccat 55933199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 292
Target Start/End: Original strand, 3340803 - 3340887
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    ||||||||||||||||||||||||| |  ||| ||| |||||||||||||||| || ||||||||| ||||||||||||||||||    
T  3340803 tgtgtgcaagtgtgagttatatgtcccgcatcagatgaaagagtaaaggttgagcaccttataagtaagaggacccataaaccca 3340887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 44621396 - 44621492
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||||||  | || |||||||| |||||||||| |||| ||||||||| ||||    
T  44621396 gactcacacttgagggggagtgtcgttgtgtgcaagtgtgagttatatgtccaacatgggataaaacagtaaaggttaaacaccttataagtaagag 44621492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 49880160 - 49880240
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    ||||||||||||||||||||| || || | |||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  49880160 tgcaagtgtgagttatatgtcccacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccca 49880240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 36608827 - 36608736
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||||||||||||||||  | |||||||||||||||||| |||||||| || |||||| |||||| ||||||| ||||    
T  36608827 tgttgttgtgtgcaagtgtgagttatatgtccaacatcggataaaagagtaaaagttgaacacctcataagtaagaggatccataaatccat 36608736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 36629212 - 36629314
Alignment:
Q  184 ctcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccc 283  Q
    ||||| |||||||||||||||||   ||| ||||||||||||||||||| || |||||||| || |||||| ||| |||| ||||||||| |||||||||    
T  36629212 ctcacacttgagggggagtgttg---tgttcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaagaggaccc 36629308  T
Q  284 ataaac 289  Q
    ||||||    
T  36629309 ataaac 36629314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 6975612 - 6975531
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||| ||||||| |||||| ||||    
T  6975612 tgcaaatgtgagttatatgtctcacatccgataaaatagtaaaggttgaatatcttataagtaagaggactcataaatccat 6975531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 16889691 - 16889614
Alignment:
Q  213 gcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| | ||||||||| ||||||  ||||||||    
T  16889691 gcaagtgtgagttatatgtctcaaatcggatagaaaagtaaaggttgaataccttataagtaagaggattcataaacc 16889614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 20826190 - 20826306
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||    |||  || ||||||||||||||| || ||||||||||| |||||| ||||||||  |||||||| |||| ||    
T  20826190 gactcacacttgagggggagtgtta---tgtagaaatgtgagttatatgtcccacatcggataaaatagtaaaagttgaacacgttataagtaagagaac 20826286  T
Q  282 ccataaacccatatccttaa 301  Q
    ||||||||||||| ||||||    
T  20826287 ccataaacccatagccttaa 20826306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 41707624 - 41707543
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||| | || ||||||||||    
T  41707624 tgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccatataagtaaaagaacccataaac 41707543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 50630911 - 50630830
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||| ||||||||||||||  | ||||||||||| |||||||||||||||  |||||||| |||||||||||||||||||    
T  50630911 tgcaagcgtgagttatatgtcctacatcggataaaatagtaaaggttgaacacattataagtaagaggacccataaacccat 50630830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 2741044 - 2741146
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||| ||||||||||    ||||||||||||||||||||||| || ||| |||| || ||||||||||||| | ||||||||| |||||||    
T  2741044 gactcacacttgaaggggagtgtta---tgtgcaagtgtgagttatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagaggac 2741140  T
Q  282 ccataa 287  Q
    ||||||    
T  2741141 ccataa 2741146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 34646815 - 34646728
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||| |||||||| ||||||| | ||||||| |||||||    
T  34646815 tgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaac 34646728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 4390267 - 4390189
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||| ||||||||||||||||||| || || || ||| ||||||||||||||||||||||| ||||||||| ||||||    
T  4390267 tgttgttgtgtgcaagtgtgagttacatatcccacatcagataaaagagtaaaggttgaacaccttataagtaagagga 4390189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 16888993 - 16888895
Alignment:
Q  192 tgagggggagtgttgctgtgtg-caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||| ||||||| |||||| ||||||||||||||||||| || |||||||| || ||||||||||||| | ||||||||| |||| ||| ||||||    
T  16888993 tgaggggaagtgttgttgtgtggcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaacctataaac 16888895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 290
Target Start/End: Original strand, 20825832 - 20825914
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||| ||||||||||||||  || ||||||||||||||||||||||||||| ||||||| | |||| |||||||||||    
T  20825832 tgtgtacaaatgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataaataagagcacccataaacc 20825914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 293
Target Start/End: Original strand, 49302902 - 49302987
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttat--aagttagaggacccataaacccat 293  Q
    |||| |||||||||||||||||| || |||  |||||| |||||||||||||||||||||  |||| |||||||||||||||||||    
T  49302902 tgtgtaagtgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaacatcttataaaagtaagaggacccataaacccat 49302987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 3700361 - 3700426
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagt 273  Q
    |||||||||||||||||||||||||  | |||||||||||||||||| |||||||| |||||||||    
T  3700361 tgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagt 3700426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 34004743 - 34004663
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || ||  ||||||| | ||||||||||||| ||||||||| |||||||||||||||    
T  34004743 tgtgtgcaagtgtgagttatatgtcacacatatgataaaa-actaaaggttgaacaacttataagtaagaggacccataaac 34004663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 49076990 - 49076898
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||||||||||||||||||||||  || || || ||||| ||||||||||||||| ||||| ||| |||| ||||||||||||||| ||||||    
T  49076990 tgtgtgcaagtgtgagttatatgttccatattggctaaaatagtaaaggttgaacaccttat-agtaagagaacccataaacccataaccttaa 49076898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 54017870 - 54017784
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctc--aaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    ||||| ||||||||| |||||||||||| | ||  | ||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  54017870 tgttgttgtgtgcaaatgtgagttatatatatcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccata 54017784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 39404014 - 39404100
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccata 294  Q
    ||||| |||||||||||||||||||  | || | ||||||||||||||||||||||  |||||||| ||||||| ||||||| ||||    
T  39404014 tgtgtacaagtgtgagttatatgtcctacattgaataaaagagtaaaggttgaacactttataagtaagaggactcataaactcata 39404100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 44620926 - 44621011
Alignment:
Q  194 agggggagtgttgctgtgtgcaagtgtgagttatatgtctcaa-atcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||||||||||| ||||  ||||||||||||| ||||| ||| |||||||||||  |||||||||||||| ||||||||| ||||    
T  44620926 agggggagtgttgttgtggacaagtgtgagttagatgtcccaacatcggataaaactgtaaaggttgaacaccttataagtaagag 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 54343147 - 54343086
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccc 283  Q
    ||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  54343147 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccc 54343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 45050597 - 45050649
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttga 260  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  45050597 tgtgtgcaagtgtgagttatatgtctcacatcaaataaaagagtaaaggttga 45050649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 51768225 - 51768139
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||| ||||||||| |||||||||||||||  | |||| ||| ||||||||| |||||||| ||||||| | ||||||| |||||||    
T  51768225 gttgttgtgtgcaaatgtgagttatatgtcctatatcgaatataagagtaaatgttgaacaccttataaataagaggactcataaac 51768139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 54936190 - 54936277
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||| ||||||||||||||    | || ||| ||||||| ||||||||||||||| ||| ||||| |||||||||||||||||||    
T  54936190 tgttgttgtgtacaagtgtgagttat----cccacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccat 54936277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 32941279 - 32941202
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||| | |||||| | || ||||||||||||||| ||||||| | ||||| | |||||||    
T  32941279 tgcaagtgtgagttatatgtcttacatcggaaagaacagtaaaggttgaacaccttataaataagagggctcataaac 32941202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 54108538 - 54108612
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||||||  ||| || || |||||||| ||||||||||||||| ||||||||| | ||||||||||||    
T  54108538 tgcaagtgtgagttat--gtcccatataggataaaatagtaaaggttgaacaccttataagtaaaaggacccataaa 54108612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 18932880 - 18932824
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||| ||||||||||||| | ||||||| | |||||||||||||||||||    
T  18932880 atcggataaaatagtaaaggttgaataccttataaataagaggacccataaacccat 18932824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 289
Target Start/End: Complemental strand, 22028539 - 22028448
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagag--taaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||| ||||||||||||| | |||||||||  | ||||||||||| |   ||||||||||||| ||||| ||| |||||||||||||||    
T  22028539 agtgttgttgtgtgcaagtgttacttatatgtcctacatcggataaaaaaaaataaaggttgaacaccttattagtaagaggacccataaac 22028448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 44620286 - 44620362
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||| ||||| ||| | ||||||||||||| || || |||||||| ||||||||||||||| ||||||||| ||||    
T  44620286 tgttgttgtgtacaaatatgagttatatgtcccacatgggataaaatagtaaaggttgaacaccttataagtaagag 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 293
Target Start/End: Original strand, 44620362 - 44620434
Alignment:
Q  221 gagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||  || ||||||||||| ||||||||||||||| ||||||| | ||||  |||||||||||||    
T  44620362 gagttatatgttccacatcggataaaacagtaaaggttgaacaccttataaataagagagcccataaacccat 44620434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 50788139 - 50788088
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||||| ||||||||||| || ||||||||||| |||||||||||||||    
T  50788139 tgcaagtgtaagttatatgtcccacatcggataaaatagtaaaggttgaaca 50788088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 45496820 - 45496882
Alignment:
Q  227 tatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| || |||||||||||  |||||||||||||| ||||||||| |||||||| ||||||    
T  45496820 tatgtcccacatcggataaaatcgtaaaggttgaacaccttataagtaagaggacctataaac 45496882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 19504695 - 19504756
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||| ||||| ||||| ||||||||||||| || ||||||||||| |||||| ||||||||    
T  19504695 tgttgttgtgtacaagtatgagttatatgtcccatatcggataaaatagtaaaagttgaaca 19504756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 28034225 - 28034306
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||| ||||||||| |  |||||||| || |||  ||||||||||  |||||||| |||| ||||||||||    
T  28034225 tgtgtgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataagtgagagaacccataaac 28034306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 39793020 - 39792939
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||| || ||| |||| || |||||| |||||||| ||||||||  |||||| || |||||    
T  39793020 tgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataagaaagaggaaccgtaaac 39792939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 44621027 - 44621079
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||| | |||||||    
T  44621027 atcggataaaacagtaaaggttgaacaccttataagtaagagggcacataaac 44621079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 45489864 - 45489792
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||| ||| || |||||||||||||||| ||||| ||| ||||||| ||| || || ||||||    
T  45489864 tgtgagttatatgtatcacattggataaaagagtaaagattgaatatcatataagtaagatgatccttaaacc 45489792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 39699079 - 39699026
Alignment:
Q  235 aaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    |||||||||| || |||||||||||||||| || ||||| |||||| |||||||    
T  39699079 aaatcggatataaaagtaaaggttgaacatattctaagtaagaggatccataaa 39699026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 11348494 - 11348410
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    ||||| ||||||||| ||||||||||||||   | ||| ||||||| |||  ||||||||||  |||||||| |||||| |||||    
T  11348494 tgttgttgtgtgcaattgtgagttatatgttctacatcagataaaatagtggaggttgaacactttataagtgagaggatccata 11348410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 5747 - 5858
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  5747 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 5846  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  5847 ccataaacccat 5858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 5386 - 5473
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||||||||||||||||||||||  | ||||||||||| ||||||||||||||| ||||||||| ||||| |||||||||    
T  5386 tgttgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagggcccataaac 5473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 7e-40; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 7553995 - 7554114
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||     
T  7553995 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggat 7554094  T
Q  282 ccataaacccatatccttaa 301  Q
    ||||||||||||| ||||||    
T  7554095 ccataaacccatagccttaa 7554114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 22566841 - 22566739
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||||| ||| ||||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  22566841 ttgagggggagtgttgttgtatgcaagtgtgagtaatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacc 22566742  T
Q  291 cat 293  Q
    |||    
T  22566741 cat 22566739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 30244241 - 30244351
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||| | ||||||||| |||||||     
T  30244241 actcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagaggact 30244340  T
Q  283 cataaacccat 293  Q
    |||||||||||    
T  30244341 cataaacccat 30244351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 7517570 - 7517661
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  7517570 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccat 7517661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 30255309 - 30255412
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||||||| || ||||||||||||||||||||||||||| ||||||||| ||||| |    
T  30255309 gactcacacttgagggggagtgttgttgtgtgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagggc 30255408  T
Q  282 ccat 285  Q
    ||||    
T  30255409 ccat 30255412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 30244671 - 30244771
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||| | |||||||    
T  30244671 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataaataagaggac 30244770  T
Q  282 c 282  Q
    |    
T  30244771 c 30244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 37533196 - 37533091
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||| || || |||||||| ||||||||||||||| ||||||||| |||||||    
T  37533196 gactcacgcttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggac 37533099  T
Q  282 ccataaac 289  Q
    ||||||||    
T  37533098 ccataaac 37533091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 190 - 289
Target Start/End: Original strand, 30245055 - 30245154
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||| ||||| ||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  30245055 cttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagacgacccataaac 30245154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 40094942 - 40094851
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  40094942 tgttgttgtgtgcaagtgtgagttatatgtctcacatcgaataaaagagtaaaggttcaacaccttataagtaagaggacccataaacccat 40094851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 200 - 293
Target Start/End: Complemental strand, 1085786 - 1085693
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| |||||||||||||||||||    
T  1085786 agtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccat 1085693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 201 - 293
Target Start/End: Original strand, 47129084 - 47129176
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  47129084 gtgttgttgtgcacaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagaggacccataaacccat 47129176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 190 - 285
Target Start/End: Original strand, 30245472 - 30245567
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||| ||||| |||||    
T  30245472 cttgagggggactgttgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttgaacaccttataagtaagagggcccat 30245567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 16569186 - 16569277
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||| |||||||||||||||||||||||| |||||||| || ||||||||||||| | ||||||||| |||||||||||||||||||    
T  16569186 tgttgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccat 16569277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 16596476 - 16596385
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||| |||||||||||||||||||||||| |||||||| || ||||||||||||| | ||||||||| |||||||||||||||||||    
T  16596476 tgttgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccat 16596385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 24177425 - 24177516
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||| ||||||||||||| || |||||||||||||||||||| |||||| ||||||||| || ||||||||||||||||    
T  24177425 tgttgttgtgtgcaagtatgagttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagtaagcggacccataaacccat 24177516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 41910762 - 41910671
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||||| | ||||||| | |||||||||||||||||||    
T  41910762 tgttgttgtgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagaggacccataaacccat 41910671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 40230453 - 40230367
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccata 294  Q
    ||||||||||||| ||||||||||| || |||| |||||| |||||| |||||||||||||||||| ||||||||||||||||||||    
T  40230453 tgtgtgcaagtgtaagttatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagaggacccataaacccata 40230367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 195 - 289
Target Start/End: Original strand, 45434619 - 45434713
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||| ||||| ||||||| ||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  45434619 gggggggtgttgttgtgtacaagtgtaagttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagaggacccataaac 45434713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 8128603 - 8128510
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||||||||||||||||||||||| || |||||||| || | ||||||||||||| |||||| || |||||||||||||||||||| ||||||    
T  8128603 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaaataaaggttgaacaccttatatgtaagaggacccataaacccataaccttaa 8128510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 28301705 - 28301620
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||||||||||||| |||||||| || |||||| | |||||| ||||||||| |||||||||||||||||||    
T  28301705 tgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaagctgaacaccttataagtaagaggacccataaacccat 28301620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 36109084 - 36109007
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  36109084 gttgttgtgtgcaagtgtgagttatatttctcacatcggataaaagagtaaaggttgaacaccttataagtaagagga 36109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 14681482 - 14681591
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||| ||||||||||| || ||| ||||||| ||||||||||||||| ||| ||||| ||||| |    
T  14681482 gactcacacttgagggggagtgttg--gtttgcaagtgtaagttatatgtcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagagggc 14681579  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  14681580 ccataaacccat 14681591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 22567206 - 22567120
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||| ||||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  22567206 tgttgttgtatgcaagtgtgagtaatatgtc-cacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaac 22567120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 34218202 - 34218111
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||| ||| |||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||| ||||||| |||||||||||    
T  34218202 tgttgttgtgtacaaatgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaacccat 34218111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 210 - 293
Target Start/End: Complemental strand, 36939893 - 36939810
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||| ||||||||| |||||||||||||| ||||    
T  36939893 tgtgcaagtgtgagttatatgtcccaaatcgtataaaatagtaaaagttgaacaccttataagtaagaggacccataaatccat 36939810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 23545 - 23457
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||||||| ||||||||||||||  || |||||||| || ||||||||||||||| ||||||||| ||||||||||||||||    
T  23545 tgttgttgtgtgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaacc 23457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 289
Target Start/End: Complemental strand, 1085436 - 1085329
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttat-atgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| | ||||| || ||||||||||| |||||| |||||||| || |||||| |||| ||    
T  1085436 actcacacttgaaggggagtgttgttgtgtgcaagtgtgagtttttatgtcccatatcggataaaatagtaaaagttgaacaactcataagtaagagaac 1085337  T
Q  282 ccataaac 289  Q
    ||||||||    
T  1085336 ccataaac 1085329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 6054562 - 6054637
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||| |||||||||||||| ||||||||||| |||||| |||||||| ||||||||| |||||||||||||||    
T  6054562 caagtgttagttatatgtctcacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaac 6054637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 45754706 - 45754804
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||| |||||||| ||||||||| ||| ||| |||||||||||| ||||||    
T  45754706 tgttgttgtgtacaagtgtgagttatatgtc-cacatcggataaaatagtaaatgttgaacaccttataagtaagatgactcataaacccatagccttaa 45754804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 29157565 - 29157646
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || | ||||||||| ||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  29157565 tgcaagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagtaagacgacccataaatccat 29157646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 36622956 - 36623041
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||| ||||||||  ||||| ||||||| ||||    
T  36622956 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataagtaggaggatccataaatccat 36623041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 36534952 - 36534864
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||||||||||| | ||||||||| ||  |||||||||| |||| |||||||||| ||||||||| ||||||||||||||||    
T  36534952 tgttgttgtgtgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaacc 36534864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 290
Target Start/End: Original strand, 45433231 - 45433319
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||| |||||||||||||||||   || ||||||||||||||||||||||||||| ||||||||| |||| || ||||||||    
T  45433231 tgttgttgtgtacaagtgtgagttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaacc 45433319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 118469 - 118378
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||| ||||||||||| || ||| |||| || ||||||||||||||| || |||||| |||||| ||||||||||||    
T  118469 tgttgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaagaggatccataaacccat 118378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 43241485 - 43241572
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||||||||  || ||||||||||| | ||||||||||||| ||||||||| | ||||| |||||||    
T  43241485 tgttgttgtgtgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataagtaaaaggactcataaac 43241572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 11845198 - 11845272
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||  || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  11845198 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccat 11845272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 24838870 - 24838780
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttag-aggacccataaaccc 291  Q
    ||||| |||||  |||||| |||||||||||||| |||| |||||||||||||||||||||| ||||||||| || |||| ||||||||||    
T  24838870 tgttgttgtgtataagtgtaagttatatgtctcacatcgaataaaagagtaaaggttgaacaccttataagtaagaaggatccataaaccc 24838780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 44361616 - 44361534
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatcctta 300  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||| ||| ||||| ||| || ||||||||||||| |||||    
T  44361616 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaacacctt-taagtaagatgatccataaacccataacctta 44361534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 9901648 - 9901720
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||||||||| | ||||||| ||||||||    
T  9901648 aagtgtgagttatatgtc-cacatcggataaaacagtaaaggttgaacatcttatacg-tagaggatccataaac 9901720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 19122740 - 19122812
Alignment:
Q  220 tgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||| |||||| ||||    
T  19122740 tgagttatatgtc-cacatcggataaaatagtaaaggttgaacaccttataagtaagaggactcataaatccat 19122812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 30032572 - 30032656
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    |||||||||||||||| || |||| ||||||||||||  |||||||| ||||||||| |||| | ||||||||| ||| ||||||    
T  30032572 gtgtgagttatatgtcccacatcgaataaaagagtaagtgttgaacaccttataagtaagagtatccataaacctatagccttaa 30032656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 37533519 - 37533441
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||   | || | |||||| ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  37533519 aagtgtgagttatatgttctacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccat 37533441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 40094556 - 40094502
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaac 262  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||||||||||||    
T  40094556 tgtgtgcaagtgtgagttatatgtccaacatcagataaaagagtaaaggttgaac 40094502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 36967397 - 36967344
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaag 255  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  36967397 tgttgttgtgtacaagtgtgagttatatgtctcacatcggataaaaaagtaaag 36967344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 41854631 - 41854694
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataag 272  Q
    ||||||||||| ||||||||||||| || ||| | ||||||||||||||||||||| ||||||||    
T  41854631 tgtgtgcaagtatgagttatatgtcccacatcag-taaaagagtaaaggttgaacaccttataag 41854694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 20599317 - 20599383
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||||||||||||||| || ||||||||||| |||||||| | ||||  |||||| | |||||||    
T  20599317 aagtgtgagttatatgtcccatatcggataaaaaagtaaaggataaacactttataaataagaggac 20599383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 37533259 - 37533213
Alignment:
Q  133 gcagcaacggctatacatgcaaagtaaaaagcttccactctagggga 179  Q
    ||||||||||| |||||  ||||||||||||||||| ||||||||||    
T  37533259 gcagcaacggcgatacagacaaagtaaaaagcttccgctctagggga 37533213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 48243262 - 48243218
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatat 229  Q
    |||| ||||||||||||||||| ||||| ||||| ||||||||||    
T  48243262 tcacacttgagggggagtgttgttgtgtacaagtctgagttatat 48243218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 7e-40; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 34364895 - 34365014
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| | ||||||||||||| ||||||||| |||||||    
T  34364895 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaataataaaggttgaacaccttataagtaagaggac 34364994  T
Q  282 ccataaacccatatccttaa 301  Q
    ||||||||||||| ||||||    
T  34364995 ccataaacccatagccttaa 34365014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 44290644 - 44290535
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| |||||||    
T  44290644 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggac 44290547  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  44290546 ccataaacccat 44290535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 37556081 - 37556200
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggat-aaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||| ||||||    
T  37556081 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaagagga 37556180  T
Q  281 cccataaacccatatccttaa 301  Q
     ||||||||||||| ||||||    
T  37556181 -ccataaacccatagccttaa 37556200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 26661710 - 26661603
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||||||||||| ||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||| |||||||    
T  26661710 gactcacacttaagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggac 26661611  T
Q  282 ccataaac 289  Q
    ||||||||    
T  26661610 ccataaac 26661603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 41157345 - 41157456
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||||||| ||| ||||||||||||||||||||||||| || ||| |||||||||||||| |||||||| ||||||||| |||||||    
T  41157345 gactcacacttaagggggagtattgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagaggac 41157444  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  41157445 ccataaacccat 41157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 3537333 - 3537226
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  3537333 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 3537236  T
Q  282 ccataaaccc 291  Q
    ||||||||||    
T  3537235 ccataaaccc 3537226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 22077680 - 22077576
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||   |||||||||||||||||||||||||| |||||||| || ||||||||||||||| ||||||||| |||||||    
T  22077680 gactcacacttgagggggagtgttg---tgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggac 22077584  T
Q  282 ccataaac 289  Q
    ||||||||    
T  22077583 ccataaac 22077576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 34364496 - 34364596
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatcctta 300  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||| || |||||||||| |||||    
T  34364496 gtgttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccgtaaacccatagcctta 34364595  T
Q  301 a 301  Q
    |    
T  34364596 a 34364596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 41184593 - 41184502
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||| |||||||||||||||||||    
T  41184593 tgttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccat 41184502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 183 - 290
Target Start/End: Original strand, 11977251 - 11977358
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||| |||||| |||||||| ||||||||| |||| ||     
T  11977251 actcacacttgagggggagtgttgctgtgtacaagtgtgagttatatgtcccacatcgggtaaaacagtaaatgttgaacaccttataagtaagagcact 11977350  T
Q  283 cataaacc 290  Q
    ||||||||    
T  11977351 cataaacc 11977358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 17294573 - 17294658
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  17294573 tgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccat 17294658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 44290983 - 44290902
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  44290983 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 44290902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 21378209 - 21378117
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccata 294  Q
    ||||| ||||||||||||| ||||||||||| || |||||||| || ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  21378209 tgttgttgtgtgcaagtgtcagttatatgtcccagatcggatagaacagtaaaggttgaatatcttataagtaagaggacccataaacccata 21378117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 210 - 293
Target Start/End: Original strand, 41142370 - 41142453
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||    
T  41142370 tgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaacccat 41142453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 41156981 - 41157068
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||| ||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  41156981 tgttgttgtgtgcaagtgtgaattatatgtcccataacggataaaagagtaaaggttgaacaccttataagtaagaggacccataaac 41157068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 215 - 290
Target Start/End: Complemental strand, 50052178 - 50052103
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  50052178 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacc 50052103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 22077990 - 22077904
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccata 294  Q
    |||||||||||||||||||||||| | |||||||||| || | ||||||||||||||||||||||| ||||||||||||||| ||||    
T  22077990 tgtgtgcaagtgtgagttatatgttttaaatcggatagaaaaataaaggttgaacatcttataagtaagaggacccataaactcata 22077904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 45084378 - 45084457
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataa 287  Q
    |||||||||||||||||||||| || || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  45084378 tgtgtgcaagtgtgagttatatctcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataa 45084457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 293
Target Start/End: Original strand, 3550721 - 3550801
Alignment:
Q  213 gcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| ||||||| |||||||||||    
T  3550721 gcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccat 3550801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 26662066 - 26661978
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||| |||||||||||||||| || || ||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  26662066 tgttgttgtgtacaagtgtgagttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaacc 26661978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 31767329 - 31767241
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| |||||||||||||| |||||||||  || ||||||||||| ||||||||||||||| ||||||||| ||||||||||| ||||    
T  31767329 tgttgttgtgtgcaagtgtgggttatatgttccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccattaacc 31767241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 37850768 - 37850680
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||||||||||||||||||||||| || |||| |||||| |||| |||||||||| ||||||||| |||| |||||||||||    
T  37850768 tgttgttgtgtgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaacccataaacc 37850680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 5528902 - 5528835
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||    
T  5528902 agttatatgtctcacatcggataaaagagtaaaggttgaacatcttataaataagaggactcataaac 5528835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 29798189 - 29798280
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||| |||||||||||||||||||||  | || |||||||| ||||||||||||||| ||||||||| ||||||| |||||||||||    
T  29798189 tgttgttgtatgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccat 29798280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 38804511 - 38804424
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||||||||||||| ||| || |||| ||||||||||||||||||||||  |||||||| |||||| ||||||||||||| ||||||    
T  38804511 caagtgtgagttatacgtcccacatcgaataaaagagtaaaggttgaacacattataagtaagaggatccataaacccataaccttaa 38804424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 48588674 - 48588570
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || |||||||||||||| ||||||  | ||||||||||| ||||||||||||||| ||||||||| ||| |||    
T  48588674 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttctatgtccgacatcggataaaatagtaaaggttgaacaccttataagtaagaagac 48588577  T
Q  282 ccataaa 288  Q
    || ||||    
T  48588576 ccgtaaa 48588570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 66634 - 66553
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||  || |||||||| || ||||||||||||||| ||||||||| |||||| ||||||||    
T  66634 tgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaagaggatccataaac 66553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 3875493 - 3875408
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||| || ||||||||||| || ||||||||||| ||||||||||| ||| ||||||||| ||||||| |||||||||||    
T  3875493 tgtgtgcaagagtcagttatatgtcacacatcggataaaaaagtaaaggttgtacaccttataagtaagaggactcataaacccat 3875408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 5320123 - 5320034
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||||||||||||||||||  || |||||||| || |||||| |||||||| ||||||||| ||||||||||||||| |||| ||||||    
T  5320123 tgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaa 5320034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 24600476 - 24600395
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || |||||||| || |||||||||||||||| |||||||| |||| || |||||||    
T  24600476 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaactcataaac 24600395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 32594874 - 32594797
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||  | ||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  32594874 tgcaagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 32594797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 66274 - 66167
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttat-atgtctcaaatcggataaaagagtaaaggtt-gaacatcttataagttagagg 279  Q
    ||||||| ||||||||| |||||||   ||||||||||||||| || |||||||| |||||||| || |||||||||| ||||| ||||||||| |||||    
T  66274 gactcacacttgaggggaagtgttg---tgtgcaagtgtgagtaatcatgtctcacatcggatagaaaagtaaaggtttgaacaccttataagtaagagg 66178  T
Q  280 acccataaacc 290  Q
    |||||||||||    
T  66177 acccataaacc 66167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 34649440 - 34649516
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||   || |||||||||||    
T  34649440 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtgcaagaacccataaacc 34649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 40082398 - 40082475
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    |||| |||| ||||||||||||||||||||  | ||||||||||| ||||||||||||||| ||||||||| ||||||    
T  40082398 gttgttgtgcgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagga 40082475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 41759483 - 41759564
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || ||||||||||| |||||| |||||||| ||||||||| ||| || ||||||| ||||    
T  41759483 tgcaagtgtgagttatatgtcacacatcggataaaatagtaaaagttgaacaccttataagtaagatgatccataaatccat 41759564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 3537752 - 3537676
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||| ||||||||||| || ||||||||||| ||||||||||||||| ||||| ||| |||||||| ||||||||||    
T  3537752 gtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttatgagtaagaggacctataaacccat 3537676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 39066369 - 39066282
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    |||||| |||||||||||||||||||||| |  || |||||||| || ||||||||||||||| ||||||| | ||| ||||||||||    
T  39066369 gtgttgttgtgtgcaagtgtgagttatatattccacatcggatagaaaagtaaaggttgaacaccttataactaagatgacccataaa 39066282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 302
Target Start/End: Original strand, 44685452 - 44685547
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaagg-ttgaacatcttataagttagaggacccataaacccatatccttaat 302  Q
    ||||||||||||||||||||||||| || |||||||| || |||||||| ||||| | ||||||||| |||||||| |||||| |||  |||||||    
T  44685452 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaat 44685547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 30630823 - 30630719
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||| |||||||||    ||||||||||||| |||||||||||| ||||||||||| | ||||||||  |||  |||||||| |||| ||    
T  30630823 gactcacacttgagagggagtgtta---tgtgcaagtgtgatttatatgtctcacatcggataaaaaattaaaggtttgacactttataagtaagagaac 30630727  T
Q  282 ccataaac 289  Q
    ||||||||    
T  30630726 ccataaac 30630719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 35154207 - 35154150
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttg 259  Q
    ||||| ||||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  35154207 tgttgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttg 35154150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 5575110 - 5575186
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccata 294  Q
    ||||| ||||||||| ||  ||||||| |||||||||||||||||| ||||||||| |||||||| ||||| |||||    
T  5575110 tgtgaattatatgtcccacgtcggatagaagagtaaaggttgaacaccttataagtaagaggacctataaatccata 5575186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 1187526 - 1187445
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||| |||||||||||| |||| ||| || |||  ||||| ||||| |||||||| ||| |||||||||||    
T  1187526 tgtgtgcaagtgtgaattatatgtctcacatcgaatataaaagtggaggttaaacattttataagtgagaagacccataaac 1187445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 22793274 - 22793359
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||| |||||||||||||||||||| || |||| ||| || |||| |||||||| |  |||||||| |||||| ||||||||||||    
T  22793274 tgtgagcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagaggatccataaacccat 22793359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 26661797 - 26661748
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  26661797 acaagcaacaagtggctccttgtgcagcaacgacgatacatgcaaagtaa 26661748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 14318875 - 14318943
Alignment:
Q  220 tgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||  ||  |||||||||| ||||||||||||||| ||||||||| ||| ||||||||||    
T  14318875 tgagttatatgttccacgtcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaa 14318943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 4878799 - 4878869
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||||||| ||||||||||||||  || ||||||||||| ||| ||| |||||||| |||||||| ||||    
T  4878799 tgtgtgcaattgtgagttatatgttccacatcggataaaatagtgaagcttgaacattttataagtgagag 4878869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 4956218 - 4956268
Alignment:
Q  239 cggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| || ||||||||||||||||||||||||| |||||| ||||||||    
T  4956218 cggatagaaaagtaaaggttgaacatcttataagtaagaggatccataaac 4956268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 9955911 - 9955981
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaaga-gtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||||||||| || ||| ||||||| | ||||||||||||||  |||||||| |||||||||||    
T  9955911 agtgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagaggacccat 9955981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 22077245 - 22077191
Alignment:
Q  235 aaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||| || ||||||||||||| | ||||||||| |||||||||||||||    
T  22077245 aaatcggatagaaaagtaaaggttgaataccttataagtaagaggacccataaac 22077191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 1188750 - 1188669
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||  || |||||||| || |||  |||||||| || |||||||| ||| ||| |||||||    
T  1188750 tgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgagaagactcataaac 1188669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 24132143 - 24132066
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||| |  |||||||| || ||||||||||||||| ||||||| | || ||| ||||||||    
T  24132143 tgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaacaccttataaataaggggatccataaac 24132066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 50469256 - 50469188
Alignment:
Q  192 tgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||||   |||||||||||||||||||||||  | ||| ||||| | |||||||||||||||    
T  50469256 tgagggggagtgttg---tgtgcaagtgtgagttatatgtcctacatcagataataaagtaaaggttgaaca 50469188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 22077299 - 22077248
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    |||||||||||||||||   ||||||||||||||||||||||| || ||||||||    
T  22077299 cttgagggggagtgttg---tgtgcaagtgtgagttatatgtcccacatcggata 22077248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 45494137 - 45494085
Alignment:
Q  212 tgcaagtgtgagtt-atatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||| ||||||| || ||||||||||| |||||||||||||||    
T  45494137 tgcaagtgtgagtttatatgtcccacatcggataaaatagtaaaggttgaaca 45494085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 37555733 - 37555800
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    |||||||||||||| ||| || ||||||||||| ||| ||||||||| |  |||||||| ||||||||    
T  37555733 aagtgtgagttataagtcccacatcggataaaatagtgaaggttgaatacattataagtaagaggacc 37555800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 50051837 - 50051777
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||| || ||||||||    
T  50051837 gactcacacttgagggggaatgttg--gtttgcaagtgtgagttatatgtcccacatcggata 50051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 44043893 - 44043849
Alignment:
Q  249 agtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||| |||||||| ||||||||| ||| |||||||||||||||    
T  44043893 agtaaatgttgaacaccttataagtaagatgacccataaacccat 44043849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 17644 - 17525
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||| ||||| |||||||    
T  17644 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggac 17545  T
Q  282 ccataaacccatatccttaa 301  Q
    ||||||||||||| ||||||    
T  17544 ccataaacccatagccttaa 17525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 37106160 - 37106277
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  37106160 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 37106257  T
Q  282 ccataaacccatatccttaa 301  Q
    |||||||||||| |||||||    
T  37106258 ccataaacccatttccttaa 37106277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 38796406 - 38796298
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||| |||||||| ||||||||| |||||||    
T  38796406 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataagtaagaggac 38796307  T
Q  282 ccataaacc 290  Q
    | |||||||    
T  38796306 ctataaacc 38796298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 15880233 - 15880344
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||| ||||||| ||||| ||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||| |||||||    
T  15880233 gactcacacttaaggggaagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagaggac 15880332  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  15880333 ccataaacccat 15880344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 5542811 - 5542705
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || |||| |||||| ||||||||||||||| ||||||||| |||||||    
T  5542811 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccatatcgaataaaatagtaaaggttgaacaccttataagtaagaggac 5542714  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  5542713 ccataaacc 5542705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 7598581 - 7598684
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||| ||||||||||  |||||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||||||    
T  7598581 gactcacacttgagagggagtgttg--gtgtgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggac 7598678  T
Q  282 ccataa 287  Q
    ||||||    
T  7598679 ccataa 7598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 31468926 - 31468844
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataag 272  Q
    ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||||||||    
T  31468926 cttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaatatcttataag 31468844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 36178763 - 36178682
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  36178763 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 36178682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 40733487 - 40733595
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||| ||||||  ||||| ||||||||||||||||||| || ||| ||||||| |||||| |||||||| ||||||||| |||||||    
T  40733487 gactcacacttgaggggaagtgttattgtgtacaagtgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagaggac 40733586  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  40733587 ccataaacc 40733595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 269
Target Start/End: Complemental strand, 36785751 - 36785664
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttat 269  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||    
T  36785751 gactcacactttagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttat 36785664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 290
Target Start/End: Original strand, 6712964 - 6713054
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||| ||| | |||||||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||| ||||||||||||||||    
T  6712964 agtgttgttgtatacaagtgtgagttatatgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaacc 6713054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 29676873 - 29676971
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||||| |||||||||| |||||| |||||||| |||||||||||||||| || |||||||||||||||||||||| |||| |||||| || ||||||    
T  29676873 gactcacacttgagggggtgtgttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggtttaacaccttataggtgagagga 29676971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 962598 - 962679
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||    
T  962598 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaacccat 962679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 1769889 - 1769974
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccata 294  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| ||||||| ||||||| ||||    
T  1769889 gtgtgcaagtgtgagttatatgtcacacatcggataaaagagtaaaagttgaacaccttataagtaagaggactcataaactcata 1769974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 6421369 - 6421462
Alignment:
Q  196 ggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||| |||||| ||||  ||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  6421369 ggggggtgttgttgtgcacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaac 6421462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 14745825 - 14745744
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || || |||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  14745825 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 14745744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 28531499 - 28531395
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||   ||||||||||||||||||||||| || |||||||| || || |||||||||||| ||||||||| ||||| |    
T  28531499 gactcacacttgagggggagtgttg---tgtgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagaggtc 28531403  T
Q  282 ccataaac 289  Q
    ||||||||    
T  28531402 ccataaac 28531395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 40679814 - 40679706
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||   ||||||| ||||||||||||||| || |||||||| || ||||| ||||||||| ||||||||| |||| ||    
T  40679814 gactcacacttgagggggagtgttg---tgtgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacaccttataagtaagagaac 40679718  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  40679717 ccataaacccat 40679706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 41283633 - 41283556
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  41283633 tgcaagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 41283556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 38796788 - 38796700
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||||||||||||||||||||||| || ||| ||||||| | ||||||||||||| ||||||||| ||||||||||||||||    
T  38796788 tgttgttgtgtgcaagtgtgagttatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagaggacccataaacc 38796700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 28254405 - 28254318
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||| ||||||| ||||||||| || |||||||| || ||||||||||||||||||||||||| |||||||||||||||    
T  28254405 tgttgttgtgtgccagtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaac 28254318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 37632759 - 37632673
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccata 294  Q
    |||||||||||||||||||||||||  | ||||||||||| ||||||||||  |||| |||||||| ||||||||||||||||||||    
T  37632759 tgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagaggacccataaacccata 37632673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 40733853 - 40733950
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagg 279  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||||||| || |||| |||||||||||||| || |||| ||||||||| |||||    
T  40733853 gactcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaagatttaacaccttataagtaagagg 40733950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 15511661 - 15511572
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||  ||||||||||| || | |||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  15511661 tgttgttgtgtgcaagtg--agttatatgtcacacaacggataaaagagtaaaggttgaacacgttataagtaagaggacccataaacccat 15511572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 36178455 - 36178346
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||| ||  |||||||||| ||||||||| ||||| ||||||||| || ||||    
T  36178455 gactcacacttgagggggactgttg--gtttgcaagtgtgagttatatgtcccacttcggataaaatagtaaaggtggaacaccttataagtaaggggac 36178358  T
Q  282 ccataaacccat 293  Q
     |||||||||||    
T  36178357 tcataaacccat 36178346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 31899594 - 31899507
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||| |||||||||||||||||  || ||||||||||| |||||| |||||||| ||||||||| |||||||||||||||    
T  31899594 tgttgttgtgtgaaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaac 31899507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 5543156 - 5543078
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||||| |||||||||    
T  5543156 tgcaagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggatccataaacc 5543078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 290
Target Start/End: Original strand, 33731653 - 33731726
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||| |||||| |||||||||    
T  33731653 gtgtgagttatatatctcacatcggataaaagagtaaaggttgagcaccttataagtaagaggatccataaacc 33731726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 35580885 - 35580801
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||| || ||||||||||| | |||| |||||||| ||||||||| |||||| ||||||||||||    
T  35580885 tgtgtgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagagga-ccataaacccat 35580801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 37105924 - 37106001
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || |||| |||||| ||||||||||||||| ||||||||| || ||||||||||||    
T  37105924 tgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaac 37106001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 42514649 - 42514730
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||||||  | ||| |||| || ||||||||||||||| ||||||||| |||||||||||||||||||    
T  42514649 tgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccat 42514730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 16542438 - 16542518
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||| ||||||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||||||| | |||||||    
T  16542438 gtgttgttgtgtgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggac 16542518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 293
Target Start/End: Complemental strand, 14745466 - 14745371
Alignment:
Q  196 ggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||  || ||||| ||||||||||||||| || |||| |||||| ||||| ||||||||||||| |||||  ||||||||||||||||||    
T  14745466 ggggagtgttg--gtttgcaactgtgagttatatgtcccacatcgaataaaatagtaatggttgaacatcttgtaagtatgaggacccataaacccat 14745371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 31259787 - 31259696
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatc---ggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| |||||| ||||| ||||||||||||||| |||   ||||||||||||||||||| |||| ||||||||| ||| ||||||||||||    
T  31259787 tgttgttgtgtgtaagtgcgagttatatgtctcacatcatcggataaaagagtaaaggttcaacaccttataagtaagatgacccataaacc 31259696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 6421289 - 6421352
Alignment:
Q  197 gggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttga 260  Q
    |||||||||| ||||| ||||||| ||||||||||| || ||||||||||||||||||||||||    
T  6421289 gggagtgttgttgtgtacaagtgtaagttatatgtcccacatcggataaaagagtaaaggttga 6421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 36006047 - 36005961
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||| ||||||||||||||||||| || |||| ||| || |||||| |||||||| ||||||||| |||||||||||||||    
T  36006047 tgttgttgtgtacaagtgtgagttatatgtcccacatcgaatagaa-agtaaaagttgaacaccttataagtaagaggacccataaac 36005961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 3673055 - 3673120
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaa 247  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||||| || || ||||||||    
T  3673055 gactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaa 3673120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 5367451 - 5367544
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||| |||||||||  |||||||| || |||||||||||||| |||||||||||| ||||||||| ||| || |||| ||| |||| ||||||    
T  5367451 tgtgtacaagtgtgatatatatgtcccagatcggataaaagagcaaaggttgaacaccttataagtaagatgatccatgaacacataaccttaa 5367544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 29676543 - 29676612
Alignment:
Q  220 tgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||| || |||||||||||||||| |||||||  |||||||| |||| ||||||||||    
T  29676543 tgagttatatgtctcacattggataaaagagtaaagattgaacacattataagtgagagaacccataaac 29676612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 292
Target Start/End: Original strand, 9231245 - 9231329
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    |||||| |||| |||||||||||||||| ||| |||| || |||||||||||||||| |||||| | |||||| |||| ||||||    
T  9231245 tgtgtgtaagtatgagttatatgtctcatatcagatagaaaagtaaaggttgaacatattataaataagaggatccatcaaccca 9231329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 30313149 - 30313254
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||| ||  ||| |||||||||| ||| ||||||||||||| |||||||| || |||  |||||||||| ||||||||| |||||||    
T  30313149 gactcacacttgaggggaaga-ttgttgtgtgcaagcgtgtgttatatgtctcacatcggatagaaaagtggaggttgaaca-cttataagtgagaggac 30313246  T
Q  282 ccataaac 289  Q
    ||| ||||    
T  30313247 ccaaaaac 30313254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 6422126 - 6422199
Alignment:
Q  228 atgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||| || ||| ||||||| |||||||||||||||  |||||| | |||||||||||||||||||| ||||||    
T  6422126 atgtcccacatcagataaaaaagtaaaggttgaacacattataattaagaggacccataaacccatagccttaa 6422199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 7598225 - 7598317
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    |||||||||||||| ||||||||   | |||| ||| || |||||||||| |||| ||||||| | ||||||||||||||| |||| ||||||    
T  7598225 gtgtgcaagtgtgaattatatgttctacatcgaatagaaaagtaaaggttcaacaccttataaataagaggacccataaactcatagccttaa 7598317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 23346231 - 23346325
Alignment:
Q  208 tgtgtgcaagtgtgagttata--tgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||||| |||||||||||||  ||||||| |||| ||| || |||||||||| |||| ||||||| | ||||| |||||||||||||| ||||||    
T  23346231 tgtgtgcgagtgtgagttatatatgtctcacatcgtatagaaaagtaaaggttaaacaccttataa-taagagggcccataaacccatagccttaa 23346325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 36178304 - 36178248
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||| ||||||||||||||| ||||||||| || | ||||||||||||||    
T  36178304 atcggataaaatagtaaaggttgaacaccttataagtaagggaacccataaacccat 36178248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 30323435 - 30323541
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||  ||| |||||||||||||| |||||||||| |||||| |||| || | |  ||||||||||  ||| |||| |||||||    
T  30323435 gactcacacttgagggggaga-ttgttgtgtgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacactttagaagtgagaggac 30323533  T
Q  282 ccataaac 289  Q
    | ||||||    
T  30323534 ctataaac 30323541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 40163520 - 40163453
Alignment:
Q  223 gttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||| || |||||||| || ||||||||||||||| ||||||||| ||| ||||||| ||||    
T  40163520 gttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccattaacc 40163453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 12529195 - 12529109
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||| ||| |||||||||||||||||||||  | |||  |||||| ||||||| ||||||| | ||||||| ||||||| |||||||    
T  12529195 gttgttgtatgcaagtgtgagttatatgtcctacatcaaataaaacagtaaagattgaacaccgtataagtaagaggactcataaac 12529109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 28254254 - 28254193
Alignment:
Q  228 atgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||| |||||||| || |||||||||||||||  |||||||| ||||||| |||||||    
T  28254254 atgtctcacatcggatagaaaagtaaaggttgaacactttataagtaagaggactcataaac 28254193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 33561613 - 33561532
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||  || ||| |||| || |||  ||||| ||||  |||||||| |||||||||||||||    
T  33561613 tgtgtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagaggacccataaac 33561532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 33953947 - 33953851
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||||||||   ||||||| ||||||||||| ||| || ||| |||| || |||  ||||||||||   ||||||| ||||||||||||||||    
T  33953947 ttgagggggagtgttg---tgtgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacactatataagtgagaggacccataaacc 33953851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 41678554 - 41678447
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatat--gtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagg 279  Q
    ||||||| ||||| |||||||||||   ||||||||||||||||||||  |||||| ||| |||| || ||   ||||| ||||  |||||||| |||||    
T  41678554 gactcacacttgaaggggagtgttg---tgtgcaagtgtgagttatatatgtctcacatcagatagaaaaggggaggttaaacactttataagtgagagg 41678458  T
Q  280 acccataaacc 290  Q
    |||||||||||    
T  41678457 acccataaacc 41678447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 293
Target Start/End: Complemental strand, 29874188 - 29874100
Alignment:
Q  205 tgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||| |||||||| |||||||||| || ||| |||| || |||  ||||||||||  |||||| |  ||||||||||||||||||    
T  29874188 tgctgtgtacaagtgtgtgttatatgtcccacatcagatagaaaagtggaggttgaacactttataattgggaggacccataaacccat 29874100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 29873724 - 29873618
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||  ||| |||||||||| ||| |||| ||||| || ||| |||| || |||  ||||||||||| ||||||||  ||||||    
T  29873724 gactcacacttgagggggaga-ttgttgtgtgcaagggtgtgttacatgtcccacatcagatagaaaagtggaggttgaacattttataagtgggaggac 29873626  T
Q  282 ccataaac 289  Q
     |||||||    
T  29873625 tcataaac 29873618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 40734251 - 40734298
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtc 232  Q
    |||| ||||||||||||||||  ||||| |||||||||||||||||||    
T  40734251 tcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtc 40734298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 29676787 - 29676844
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttcc 168  Q
    ||||||| ||||||||| |||||||||||||||  ||||| || |||||||||||||||    
T  29676787 acaagcagcaagtggctccttgtgcagcaacggaaatacaagc-aagtaaaaagcttcc 29676844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 14745566 - 14745517
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||||||||||||| ||||||||| |||||| |||||  ||||||||    
T  14745566 acaagcaacaagtggctccttgtgcaggaacggcgatacagacaaagtaa 14745517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 16590884 - 16590940
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggat-aaaagagtaaaggttgaaca 263  Q
    ||||||||||||||||||||||||| || |||  || |||| |||||||||||||||    
T  16590884 tgtgtgcaagtgtgagttatatgtcccacatcaaataaaaaaagtaaaggttgaaca 16590940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 30359579 - 30359698
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||| |||||||    
T  30359579 gactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagaggac 30359678  T
Q  282 ccataaacccatatccttaa 301  Q
     |||||||||||| ||||||    
T  30359679 tcataaacccataaccttaa 30359698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 9309325 - 9309432
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| |||||||    
T  9309325 gactcacaattgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagaggac 9309424  T
Q  282 ccataaac 289  Q
    || |||||    
T  9309425 ccttaaac 9309432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 30359261 - 30359360
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||| ||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||| ||||||    
T  30359261 tgttgttgtgtacaagtgtgagttatatgtctcacatcggataaaagagtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaa 30359360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 190 - 289
Target Start/End: Original strand, 34835187 - 34835286
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||| |||| |||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  34835187 cttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 34835286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 8918952 - 8918844
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| || ||| ||||  |||||||||||||||||  |||||||| |||||||    
T  8918952 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggac 8918853  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  8918852 ccataaacc 8918844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 8794100 - 8794189
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||||| ||||||||    
T  8794100 gtgttgttgtgtacaagtgtgagttatatgtctcacatcggataaaagaataaatgttgaacatcttataagtaagaggactcataaacc 8794189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 45122219 - 45122138
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  45122219 tgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaacccataaac 45122138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 190 - 290
Target Start/End: Original strand, 45122984 - 45123082
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| |||| ||  ||||| ||| |||||||||||    
T  45122984 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacacct--taagtaagatgacccataaac 45123081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 3670032 - 3670149
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||| || ||||||||||| |||||||||| |||| |||||||||  ||||||    
T  3670032 gactcacacttgagggggactgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtttaacaccttataagtatgaggac 3670129  T
Q  282 ccataaacccatatccttaa 301  Q
    ||||||||| || |||||||    
T  3670130 ccataaacctatttccttaa 3670149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 9482782 - 9482681
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||| ||||| ||||||  ||||||||||  || || |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9482782 cttgagggggagtgttgttgtgtacaagtg--agttatatgttccacatgggataaaagagtaaaggttgaacaccttataagtaagaggacccataaac 9482685  T
Q  290 ccat 293  Q
    ||||    
T  9482684 ccat 9482681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 284
Target Start/End: Complemental strand, 18372442 - 18372342
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||   ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| ||| |||    
T  18372442 gactcacacttgagggggagtgttgttgtga--aagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaagac 18372345  T
Q  282 cca 284  Q
    |||    
T  18372344 cca 18372342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 70425 - 70352
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    |||||||||||||| || |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  70425 gtgagttatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagaggacccataaaccca 70352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 1514077 - 1513984
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||| ||||| |||||||||| || || ||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||    
T  1514077 tgtgtacaagtatgagttatatatcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccttaaacccataaccttaa 1513984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 9608741 - 9608826
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||| ||| |||||||||||||||    
T  9608741 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccataaacccat 9608826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 41972154 - 41972239
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||| | |||||||||||||||||    
T  41972154 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgataggacccataaacccat 41972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 290
Target Start/End: Original strand, 147441 - 147529
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| || ||| |||||||||||||||||| || ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  147441 tgttgttgcgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaacc 147529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 1014057 - 1013948
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||  || ||||||||||| |||||| |||||||| | ||||||| |||||||    
T  1014057 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgttccacatcggataaaatagtaaaagttgaacaccctataagtaagaggac 1013960  T
Q  282 ccataaacccat 293  Q
    | ||||||||||    
T  1013959 caataaacccat 1013948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 34835444 - 34835552
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaat-cggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||  | | ||||||| |||||||||| |||| ||||||||| ||||||    
T  34835444 gactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagagga 34835543  T
Q  281 cccataaac 289  Q
    |||||||||    
T  34835544 cccataaac 34835552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 34835710 - 34835818
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaat-cggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||  | | ||||||| |||||||||| |||| ||||||||| ||||||    
T  34835710 gactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagagga 34835809  T
Q  281 cccataaac 289  Q
    |||||||||    
T  34835810 cccataaac 34835818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 45121843 - 45121736
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||||||||||| ||||| |||||||||||| | |||| || |||||||||||||||||||||||| || ||||||||| ||||||     
T  45121843 gactcacacttaagggggagtgttgttgtgtacaagtgtgagttgt-tgtcccacatcggataaaagagtaaaggttgatcaccttataagtaagaggat 45121745  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  45121744 ccataaacc 45121736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 3038458 - 3038367
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| | |||||||||||||||||    
T  3038458 tgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaacccat 3038367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 25561972 - 25561897
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  25561972 caagtgtgagttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaac 25561897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 147799 - 147880
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||||| |||||| ||||||||    
T  147799 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatctgataaaaaagtaaatgttgaaca 147880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 9308973 - 9309060
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtct--caaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||||||||||   || ||| |||||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  9308973 tgtgtgcaagtgtgagttatatgtcctacacatcagataaaagagtaaaagttgaacatgttataagtaagaggacccataaacccat 9309060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 9483324 - 9483264
Alignment:
Q  233 tcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  9483324 tcaaatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccat 9483264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 292
Target Start/End: Original strand, 40518555 - 40518662
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||| |||   ||| ||||||||||||||||||| || ||| |||| || ||||||||||||||| ||||||| | |||||||    
T  40518555 gactcacacttgagggggagtattg---tgttcaagtgtgagttatatgtcccacatcagatagaaaagtaaaggttgaacaccttataaataagaggac 40518651  T
Q  282 ccataaaccca 292  Q
    |||||||||||    
T  40518652 ccataaaccca 40518662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 43274947 - 43274859
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| |||||  ||||||||||||||||| ||| ||| ||||||||||||||||||||| || |||||||| ||||||||||||||||    
T  43274947 tgttgttgtgtataagtgtgagttatatgtttcacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaacc 43274859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 33113535 - 33113448
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||| ||||| |||||||||||||  | ||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  33113535 tgttgttgtgtacaagtttgagttatatgtcctacatcggataaaatagtaaaggttgaacgtcttataagtaagaggacccataaac 33113448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 284
Target Start/End: Complemental strand, 18372859 - 18372785
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccca 284  Q
    |||| |||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  18372859 tgtgaaagtgtgagttatatgtcacacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccca 18372785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 3669687 - 3669764
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| ||||||| |||||||    
T  3669687 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaac 3669764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 5420651 - 5420732
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||  ||||||||| || |||||||| || ||||||||||||||||||||||||| ||||||| |||||||||||    
T  5420651 tgcaagtgtgtattatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaacccat 5420732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 212 - 292
Target Start/End: Complemental strand, 20870733 - 20870651
Alignment:
Q  212 tgcaagtgtgagttatatgtct--caaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    |||||||||||||||||| | |  || ||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  20870733 tgcaagtgtgagttatatatgttccacatcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaaccca 20870651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 40579662 - 40579587
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||| |||||||| ||| || |||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  40579662 caagtgtgaattatatgtttcatattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 40579587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 41416322 - 41416251
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||| |||||||||    
T  41416322 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacc 41416251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 45122070 - 45121991
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||| || |||| |||||| |||||||||||||||  |||||||| ||||||| |||||||    
T  45122070 tgtgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaac 45121991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 6877032 - 6876946
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatat-gtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    |||||| |||||||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||||||| | ||| ||||||||    
T  6877032 gtgttgttgtgtgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaacaccttataaataagatgacccata 6876946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 1014403 - 1014326
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||  | ||| ||||||| ||||||||||||||| ||||||||| ||||||||| |||||    
T  1014403 tgcaagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccgtaaac 1014326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 34834865 - 34834953
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| ||||| ||||||||||||||||||| || || |||||||| |||||||||| |||| ||||||||| ||| ||| |||||||    
T  34834865 gtgttgttgtgtacaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagatgactcataaac 34834953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 18371842 - 18371737
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||| || |||||  |||||  ||||||||||| || ||||||||||| ||||||||||||||||    ||||| ||| |||    
T  18371842 gactcacacttgagggggagtgctgttgtgtagaagtg--agttatatgtcacacatcggataaaatagtaaaggttgaacat----taagtaagaagac 18371749  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  18371748 ccataaacccat 18371737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 18373118 - 18373012
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||  ||||||||| ||||| || |||||| ||||||||| ||  |||||||||| ||||||||||||||| ||||||| | |||||||    
T  18373118 gactcacacttgagatggagtgttgttgtgtaca-gtgtgatttatatgtcccacttcggataaaatagtaaaggttgaacaccttataaataagaggac 18373020  T
Q  282 ccataaac 289  Q
     |||||||    
T  18373019 tcataaac 18373012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 20130454 - 20130536
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatcctta 300  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||| ||| ||||| ||| || ||||||||||||| |||||    
T  20130454 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaacacctt-taagtaagatgatccataaacccataacctta 20130536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 25561792 - 25561729
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  25561792 agttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagtacccat 25561729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 37544646 - 37544567
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||| ||| || ||||||||||| |||||||||||||||  |||||||  |||||||||||||| ||||    
T  37544646 caagtgtgagttataagtcgcacatcggataaaatagtaaaggttgaacacattataagaaagaggacccataaatccat 37544567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 32640682 - 32640633
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacat 264  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  32640682 aagtgtgagttatctgtctcacatcggataaaagagtaaaggttgaacat 32640633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 6731876 - 6731953
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaa 261  Q
    |||||||  |||||||||||||||| | ||  ||||||||||||||||||| || ||||||||||| |||||||||||||    
T  6731876 gactcacatttgagggggagtgttgttttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 6731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 30441081 - 30441166
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatc----ttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || ||||| ||||| ||||||||||||||| |    |||||||| ||||| |||||||||||||    
T  30441081 tgcaagtgtgagttatatgtcccacatcggctaaaatagtaaaggttgaacaccttaattataagtaagagggcccataaacccat 30441166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 45122649 - 45122701
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  45122649 atcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 45122701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 18372557 - 18372485
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaagg 256  Q
    ||||||| ||||||||||||||||| ||||   |||||||||||||||||| || ||||||||||| ||||||||    
T  18372557 gactcacacttgagggggagtgttgttgtga--aagtgtgagttatatgtcccacatcggataaaatagtaaagg 18372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 18372758 - 18372680
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||| ||||||||  ||  |||||||||| ||||||||||||||| ||||||||| ||||||| |||||||||||    
T  18372758 caagtgtgatttatatgttccatttcggataaaatagtaaaggttgaaca-cttataagtaagaggactcataaacccat 18372680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 3669945 - 3669994
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  3669945 acaagcaacaagtggctccttgtgcaggaacggcgatacatgcaaagtaa 3669994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 4154828 - 4154747
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || ||| |||| || |||  ||||||||||  |||||||| | |||||||||||||    
T  4154828 tgtgtgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataagtgaaaggacccataaac 4154747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 9609122 - 9609175
Alignment:
Q  249 agtaaaggttgaacatcttataagttagaggacccataaacccatatccttaat 302  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||  |||||||    
T  9609122 agtaaaggttgaacatcttataagtaagatgacccataaacccatcgccttaat 9609175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 9620838 - 9620757
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||||||||| | | |||| || |||| | ||||| ||  |||||||| |||||||||||||||    
T  9620838 tgtgtgcaagtgtgagttatatgtctcacaacagatagaaaagtagaagttgatcactttataagtgagaggacccataaac 9620757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 18380171 - 18380095
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    |||||||||||||| || || |||| |||||| ||||||||||||||| ||||||||| || || || |||||||||    
T  18380171 agtgtgagttatatatcccacatcgaataaaatagtaaaggttgaacaccttataagtaagggggcctataaaccca 18380095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 43398225 - 43398161
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    |||||||||||||| ||||| |||||||| || ||||||||||||||| ||||||| | ||||||    
T  43398225 agtgtgagttatatatctcatatcggatagaaaagtaaaggttgaacaccttataaataagagga 43398161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 20995563 - 20995508
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||  ||||||||||    
T  20995563 tgtgtgcaagtgtgagttatatgtctcacatcagataaaaaagtggaggttgaaca 20995508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 32305503 - 32305558
Alignment:
Q  238 tcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||| ||||||||||||||| ||||||||| ||| |||| ||||||||||    
T  32305503 tcggataaaatagtaaaggttgaacaccttataagtaagaagacctataaacccat 32305558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 292
Target Start/End: Original strand, 40518065 - 40518151
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaaga--gtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    ||||| ||||||||||||||||||  || || |||||||| |  |||||||||||||| ||||||||| |  |||||||||||||||    
T  40518065 tgtgttcaagtgtgagttatatgttccacattggataaaaaaaagtaaaggttgaacaccttataagtaaatggacccataaaccca 40518151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 6651510 - 6651552
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaa 261  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  6651510 gtgagttatatgtctcacatcggataaaatagtaaaggttgaa 6651552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 3037865 - 3037785
Alignment:
Q  215 aagtgtgagttatatgtct--caaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||| | |  || ||||||| ||| |||||| |||||||| ||||||||| ||||||| |||||||||||    
T  3037865 aagtgtgagttatatatgttccacatcggatgaaatagtaaatgttgaacaccttataagtaagaggactcataaacccat 3037785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 9507773 - 9507863
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtct--caaatcggataaaag---agtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||||||| ||   || || |||||||||   ||||||||||||| | ||||||||| ||||||| |||||||||||    
T  9507773 tgtgtgcaagtgtgagttatatctcctccatattggataaaagtacagtaaaggttgaataccttataagtaagaggactcataaacccat 9507863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 18645749 - 18645713
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    |||||||||||||||||||||||||||| ||||||||    
T  18645749 tgtgtgcaagtgtgagttatatgtctcacatcggata 18645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 18372122 - 18372075
Alignment:
Q  242 ataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| ||||||||||||||| ||||||||| |||||| ||||||||    
T  18372122 ataaaatagtaaaggttgaacaccttataagtaagaggatccataaac 18372075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 1014144 - 1014095
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||| ||||||||| ||||||||| |||| | |||||||||||||||    
T  1014144 acaagcagcaagtggctccttgtgcaggaacgacgatacatgcaaagtaa 1014095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 303
Target Start/End: Complemental strand, 4154467 - 4154348
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||   ||| ||||||||| |||||||||||||||  | ||| |||| || |||  ||||||||||  |||||||| ||| |||    
T  4154467 gactcacacttgagggggaaa-ttgttgtgtgcaaatgtgagttatatgtcctacatcagatagaaaagtggaggttgaacactttataagtgaga-gac 4154370  T
Q  282 ccataaacccatatccttaata 303  Q
    |||||||| |||  ||||||||    
T  4154369 ccataaactcattgccttaata 4154348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 12283869 - 12283934
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagt 273  Q
    ||||||||||||| ||||||||||| ||  || ||||||| |||||| |||||| |||||| ||||    
T  12283869 tgtgtgcaagtgtaagttatatgtcccacgtcagataaaaaagtaaatgttgaatatcttaaaagt 12283934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 43274755 - 43274702
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctca 235  Q
    ||||||| ||||||||  ||||||| ||||| |||||||||||||||| |||||    
T  43274755 gactcacacttgagggacagtgttgttgtgtacaagtgtgagttatatatctca 43274702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 4e-35; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 2578630 - 2578512
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || | |||||||||||||||||||||||||  |||||||| |||||||    
T  2578630 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacactttataagtaagaggac 2578532  T
Q  282 ccataaacccatatccttaa 301  Q
    ||||||||||||| ||||||    
T  2578531 ccataaacccatagccttaa 2578512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 29518892 - 29519001
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  29518892 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 29518989  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  29518990 ccataaacccat 29519001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 16108033 - 16108144
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||  || ||| |||||||||||||| |||||||| ||||||||| |||||||    
T  16108033 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcagataaaagagtaaatgttgaacaccttataagtaagaggac 16108132  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  16108133 ccataaacccat 16108144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 2580040 - 2579941
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||| |||||||||||||||||| | ||||||    
T  2580040 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaacccacagccttaa 2579941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 3409632 - 3409741
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||  || ||| ||||||| |||||| |||||||||||||||||| |||||||    
T  3409632 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtaccacatcagataaaatagtaaaagttgaacatcttataagtaagaggac 3409729  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  3409730 ccataaacccat 3409741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 195 - 293
Target Start/End: Original strand, 2378111 - 2378207
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  2378111 gggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 2378207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 29518503 - 29518584
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  29518503 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 29518584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 32741179 - 32741260
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  32741179 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 32741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 35210204 - 35210285
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  35210204 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaaccat 35210285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 593877 - 593789
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||| ||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  593877 tgttgctgagtgcaagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaacc 593789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 2377756 - 2377835
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  2377756 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccat 2377835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 2579293 - 2579185
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||| ||||||||||| || |||||||||||||||||| |||||||| ||||||    ||||||     
T  2579293 gactcacacttgagggggagtgttgttgtgtacaagtgttagttatatgtcccacatcggataaaagagtaaaagttgaacaccttata----agaggaa 2579198  T
Q  282 ccataaacccata 294  Q
    |||||||||||||    
T  2579197 ccataaacccata 2579185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 16454886 - 16454985
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||||| ||||| ||| |||||||||| |||| || ||| ||||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  16454886 ttgagggggagtgttgttgtgtacaaatgtgagttatgtgtcccacatcagataaaagagtaaaggttgaacaccttataagtaataggacccataaacc 16454985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 26544049 - 26544129
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||    
T  26544049 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaaccca 26544129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 16107668 - 16107759
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||| |||||||||||||||||| ||| ||||||||||| |||||||||| |||| ||||||||| ||||||| |||||||||||    
T  16107668 tgttgttgtgtacaagtgtgagttatatgtgtcacatcggataaaaaagtaaaggttaaacaccttataagtaagaggactcataaacccat 16107759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 3409259 - 3409336
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  3409259 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 3409336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 10074168 - 10074068
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||   |||||||| ||||||||||| || || |||||||| || |||||| |||||||| ||||||||| |||||||||||||||    
T  10074168 cttgagggggagtgttg---tgtgcaagggtgagttatatatcccacatcggatagaaaagtaaacgttgaacaccttataagtaagaggacccataaac 10074072  T
Q  290 ccat 293  Q
    ||||    
T  10074071 ccat 10074068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 10074548 - 10074444
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| |||||||||||||   ||||||||||||||||| | ||| || |||||||| || ||||||||||||||| ||||||||| |||||||    
T  10074548 gactcacacttaagggggagtgttg---tgtgcaagtgtgagttagaggtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggac 10074452  T
Q  282 ccataaac 289  Q
    ||||||||    
T  10074451 ccataaac 10074444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 14748496 - 14748419
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| | |||||||||||||||    
T  14748496 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaac 14748419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 9062501 - 9062430
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||| |||||||    
T  9062501 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggactcataaac 9062430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 16454565 - 16454656
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||| |||||||||||||| |||| || ||| ||||||||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  16454565 tgttgttgtgtacaagtgtgagttatgtgtcccacatcagataaaagaataaaagttgaacaccttataagtaagaggacccataaacccat 16454656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 5832182 - 5832108
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||| ||||||||||| || || |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  5832182 caagtgtaagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 5832108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 1846748 - 1846829
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||| || ||||||||| ||||||||||| ||||||||||||||| ||||||||| |||| ||||||||| ||||    
T  1846748 tgcaagtgtgaattctatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagcacccataaatccat 1846829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 1950340 - 1950267
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| |||| |||| |||||| |||||||    
T  1950340 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaagaggagccataaa 1950267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 3058226 - 3058307
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||| ||||||||||| || ||||||||||| ||||||||||||||| |||||||||  ||||| ||||||||||||    
T  3058226 tgcaagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtatgaggatccataaacccat 3058307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 293
Target Start/End: Complemental strand, 32460733 - 32460657
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||| || |||| |||||| ||||||||||||||| ||||||||| ||||||| |||||||||||    
T  32460733 gtgtgagttatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccat 32460657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 1127360 - 1127441
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||| || || ||||| ||||| ||||||||||||||| ||||||||| ||||||| |||||||||||    
T  1127360 tgcaactgtgagttatatatcccacatcgggtaaaatagtaaaggttgaacaccttataagtaagaggactcataaacccat 1127441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 293
Target Start/End: Original strand, 3415462 - 3415539
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||| || |||  |||||| ||||||||||||||| | ||||||| |||||||||||||||||||    
T  3415462 agtgtgagttatatgtcccacatcacataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccat 3415539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 10073776 - 10073697
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||| ||||||||||| || |||||| |||||  ||||||||||||| ||||||||| |||||| ||||||||    
T  10073776 tgtgtgcaagtgttagttatatgtcccacatcggagaaaag--taaaggttgaacaccttataagtaagaggatccataaac 10073697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 5958764 - 5958684
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||| |||||||||||||| | | ||||||||||| ||||||||||||||| ||||||| | |||| || |||||||    
T  5958764 gtgtgcaattgtgagttatatgtgttacatcggataaaacagtaaaggttgaacaccttataaataagagaactcataaac 5958684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 6999951 - 6999877
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||  | ||||||||||| |||||| |||||||| |||||| || |||||| ||||||||    
T  6999951 aagtgtgagttatatgtcctacatcggataaaaaagtaaaagttgaacaccttatatgtaagaggatccataaac 6999877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 10911565 - 10911643
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaaga-gtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||  | ||| ||||||| | |||||||||||||| ||||||||| ||||||| |||||||    
T  10911565 tgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagaggactcataaac 10911643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 2843560 - 2843625
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccc 283  Q
    |||||||||||||| ||| ||||||||||| | |||| |||||||| ||||||||| |||||||||    
T  2843560 tgtgagttatatgtttcacatcggataaaataataaaagttgaacaccttataagtaagaggaccc 2843625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 2579016 - 2578916
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccca 284  Q
    |||| |||||||||||||||||   || |||||||||| ||||||||| |  ||||||||||| |||||| |||||| | ||||||| | |||||| |||    
T  2579016 tcacacttgagggggagtgttg---tgagcaagtgtgatttatatgtccctcatcggataaaa-agtaaatgttgaataccttataaataagaggatcca 2578921  T
Q  285 taaac 289  Q
    |||||    
T  2578920 taaac 2578916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 2579677 - 2579573
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||| |||||||| |    ||| |||||||||||||||| || |||||| |||| ||||||||| | | | ||||||||| ||||| |    
T  2579677 gactcacacttgagggagagtgttgtta---gcaggtgtgagttatatgtcccacatcggacaaaaaagtaaaggtcggataccttataagtaagagggc 2579581  T
Q  282 ccataaac 289  Q
    ||||||||    
T  2579580 ccataaac 2579573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 8481898 - 8482003
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||  ||| ||||||||||||||||||||||||| || ||| |||| || |||  ||||||||||  |||||| | ||| |||    
T  8481898 gactcacacttgagggggaga-ttgttgtgtgcaagtgtgagttatatgtc-cacatcagatataaaagtggaggttgaacactttataaatgagatgac 8481995  T
Q  282 ccataaac 289  Q
     |||||||    
T  8481996 tcataaac 8482003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 6071128 - 6071209
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || || | ||| || |||  ||||||||||  |||||||| ||| || ||||||||    
T  6071128 tgtgtgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacactttataagtgagatgatccataaac 6071209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 14789325 - 14789284
Alignment:
Q  249 agtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||||||| |||| |||| ||||||||||||||||    
T  14789325 agtaaaggttgaacaccttacaagtaagaggacccataaacc 14789284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 35210503 - 35210551
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||| ||||||||||||| | ||| ||||| |||||||||||    
T  35210503 atcggataaaatagtaaaggttgaataccttgtaagtaagaggacccat 35210551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 26074582 - 26074693
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||| |||||||    
T  26074582 gactcacacttgagggggagtgtttttgtgtacaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtaagaggac 26074681  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  26074682 ccataaacccat 26074693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 26074970 - 26074862
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||   |||||||  ||||||    
T  26074970 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacaatataagtaggaggac 26074871  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  26074870 ccataaacc 26074862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 26075330 - 26075239
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  26075330 tgttgttgtgtacaagtgtgatttatatgtctcacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccat 26075239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 13415947 - 13415840
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||| |||| || ||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| ||||||||| |||||||    
T  13415947 gactcacacttgagggg-agtgctgttgtgtgcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagaggac 13415849  T
Q  282 ccataaacc 290  Q
    |||||||||    
T  13415848 ccataaacc 13415840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 15370089 - 15370188
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||| ||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||| | ||||||    
T  15370089 tgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaatccacagccttaa 15370188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 40296483 - 40296392
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| || |||||||||||| ||||||||| |||||||||||||||||||    
T  40296483 tgttggtgtgtgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaacccat 40296392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 3295204 - 3295092
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtg--caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagg 279  Q
    ||||||| ||||||||||||||||| ||||||  ||||||||||| ||||||| || ||||||||||| ||||||||||||||| ||||||||| ||| |    
T  3295204 gactcacacttgagggggagtgttgttgtgtgtgcaagtgtgagt-atatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaag 3295106  T
Q  280 acccataaacccat 293  Q
    ||||||||||||||    
T  3295105 acccataaacccat 3295092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 26074330 - 26074223
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    |||||| |||||||||||||||||   ||||||||||||||||||||||| || ||||||||||| ||||||||||||||| || ||| || ||||||||    
T  26074330 actcacacttgagggggagtgttg---tgtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaacacctcatatgtaagaggacc 26074234  T
Q  283 cataaacccat 293  Q
    ||| |||||||    
T  26074233 catgaacccat 26074223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 208 - 292
Target Start/End: Original strand, 41632778 - 41632862
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    ||||||||||||| |||||||||||||| |||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||    
T  41632778 tgtgtgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaaccca 41632862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 299479 - 299578
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||| |||| |||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||| |||| ||||||    
T  299479 tgttgttgtgcgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaactcatagccttaa 299578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 6224186 - 6224273
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  6224186 tgttgttgtgtacaagtgtgagttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaac 6224273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 36492385 - 36492298
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  36492385 tgttgttgtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccaataaac 36492298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 41170640 - 41170715
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  41170640 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccat 41170715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 12662820 - 12662729
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||| |||  ||||||||| ||||    
T  12662820 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaatccat 12662729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 18603276 - 18603197
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||||||    
T  18603276 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 18603197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 9498812 - 9498731
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||||||||||||||| ||| |||| || ||||||||||||||| ||||||||| |||||||||||||||||||    
T  9498812 tgcaaatgtgagttatatgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagaggacccataaacccat 9498731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 32487394 - 32487474
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||    
T  32487394 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca-cctataagtaagaggacccataaacccat 32487474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 35150003 - 35150087
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||| ||| |||||||||| ||||    
T  35150003 tgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaaga-gacccataaatccat 35150087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 6500795 - 6500899
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||| |||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| | | |||||    
T  6500795 gactcacacttgatggggagtgttg--gtttgcaagtgtgagttatatgtc-cacatcggataaaatagtaaaggttgaacaccttataaataaaaggac 6500891  T
Q  282 ccataaac 289  Q
    ||||||||    
T  6500892 ccataaac 6500899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 185 - 299
Target Start/End: Original strand, 624171 - 624283
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccca 284  Q
    |||| ||||||||| |||||||  || ||||||||||||||||||||| || || | |||||| |||||||||||||||  |||||||| ||| ||||||    
T  624171 tcacacttgaggggaagtgttg--gtttgcaagtgtgagttatatgtcccacattgtataaaatagtaaaggttgaacacgttataagtaagatgaccca 624268  T
Q  285 taaacccatatcctt 299  Q
    |||||||||| ||||    
T  624269 taaacccatagcctt 624283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 27502194 - 27502116
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||||||||||||| || || |||||||| |||||||||| |||| ||||||||| ||||||||||||||||    
T  27502194 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagaggacccataaacc 27502116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 1028679 - 1028586
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||| ||||||||||||||||||| || |||||||| || |||||||| ||||||  |||||||| |||||||||||||||| ||| ||||||    
T  1028679 tgtgtacaagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaacctataaccttaa 1028586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 6500451 - 6500531
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||  |||||||||    
T  6500451 tgcaagtgtgagttatatgtc-cacatcggataaaatagtaaaggttgaacaccttataagtaagaggacctttaaacccat 6500531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 36568729 - 36568644
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||| || |||||||| || |||||| |||||||| ||||||||| ||| ||||| |||||||||    
T  36568729 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacccgtaaacccat 36568644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 11417143 - 11417054
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||  ||||||||||  || ||||||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||    
T  11417143 tgttgttgtgtgcaagtg--agttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccat 11417054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 290
Target Start/End: Original strand, 25327925 - 25328013
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| |||||  ||||||||||||||||||  | ||||||||||| |||||| |||||||| ||||||||| ||||||||||||||||    
T  25327925 tgttgttgtgtctaagtgtgagttatatgtcctacatcggataaaacagtaaaagttgaacaccttataagtaagaggacccataaacc 25328013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 35914839 - 35914930
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||  |||| ||||||||||||| || |||||||||||||||||||||||||||| |||||||| ||| ||||| |||| ||||    
T  35914839 tgttgttgtgtataagtatgagttatatgtcacacatcggataaaagagtaaaggttgaacattttataagtaagaagacccgtaaatccat 35914930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 3295505 - 3295424
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||| |||||||||| ||||||  || ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  3295505 tgtgtggaagtgtgagt-atatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacc 3295424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 42405764 - 42405676
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||| |||||||||||||||||||  | ||||||||||| ||||||||||||||| |||| |||| | ||||| ||||||||    
T  42405764 tgttgttgtgtacaagtgtgagttatatgtccaacatcggataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaacc 42405676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 31509594 - 31509700
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||| |||  ||| |||||||||||||||||||||||||||| |||||||| || |||  ||||||| ||  |||||||| |||||||    
T  31509594 gactcacacttgagggagaga-ttgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggac 31509692  T
Q  282 ccataaac 289  Q
     |||||||    
T  31509693 tcataaac 31509700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 15370384 - 15370491
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| |||||||||||||||||             |||||| ||| |||||| |||||||| ||||||||| |||||||    
T  15370384 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagtg------------tcggatgaaacagtaaatgttgaacaccttataagtaagaggac 15370471  T
Q  282 ccataaacccatatccttaa 301  Q
    ||||||||||||| ||||||    
T  15370472 ccataaacccatagccttaa 15370491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 292
Target Start/End: Original strand, 26074320 - 26074398
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    ||||||||||||||||||| || ||| |||| || | ||||| ||||||| ||||||||| ||||||||||||||||||    
T  26074320 caagtgtgagttatatgtcccacatcagatagaaaactaaagattgaacaccttataagtaagaggacccataaaccca 26074398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 35168006 - 35167920
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||| ||||| ||||| |||||||| | ||||| ||| ||||||||||||||||||||||| |||||||||  || ||||||||||    
T  35168006 tgttgttgtgtacaagtatgagttatgtatctcacatcagataaaagagtaaaggttgaacaccttataagtaggatgacccataaa 35167920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 42508608 - 42508693
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||| |||||| || || |||||||| || |||||||||| ||||||| |||||| ||||||| |||||||||||    
T  42508608 tgtgtacaagtgtgaattatatatcccacatcggatagaaaagtaaaggttaaacatctaataagtaagaggactcataaacccat 42508693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 38427553 - 38427620
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    |||||||||||||||| || || ||||| || |||||||||||||||||||||||| ||||||||||||    
T  38427553 gtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacatcttataag-tagaggacccat 38427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 623818 - 623869
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  623818 tgcaagtgtgagttatatgtctcacatcggatataatagtaaaggttgaaca 623869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 24489389 - 24489283
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||   ||| ||||||||||||||||||| || ||| |||| || || ||||||| |||| ||||| ||| |||  ||    
T  24489389 gactcacacttgagggggagtgttg---tgttcaagtgtgagttatatgtcccacatcagatagaaaagaaaaggttaaacaccttattagtaaga--ac 24489295  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  24489294 ccataaacccat 24489283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 294
Target Start/End: Original strand, 39309680 - 39309765
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccata 294  Q
    ||||| ||||| ||||||||||||| || |||||||||||| ||||| ||||||||  |||||| | |||||| |||||||||||||    
T  39309680 tgtgtacaagtatgagttatatgtcccacatcggataaaagggtaaatgttgaacacattataaataagagga-ccataaacccata 39309765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 7768852 - 7768925
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataa 287  Q
    |||||||||||||||| ||  | ||||||||||| | ||||||||||||| ||||||||| | |||||||||||    
T  7768852 caagtgtgagttatatatcctacatcggataaaataataaaggttgaacaccttataagtaaaaggacccataa 7768925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 29549413 - 29549336
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||  || ||| ||||||| |||||||| |||||| | ||||||| ||| |||||||||||    
T  29549413 tgcaagtgtgagttatatgttccatatcagataaaatagtaaaggatgaacaccatataagtaagaagacccataaac 29549336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 35150736 - 35150789
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaa 254  Q
    |||||| ||||||||||||||||||||||||| || |||| |||||||||||||    
T  35150736 gtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 35151027 - 35151080
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaa 254  Q
    |||||| ||||||||||||||||||||||||| || |||| |||||||||||||    
T  35151027 gtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35151080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 290
Target Start/End: Complemental strand, 34753193 - 34753105
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| ||||| ||| ||| ||||||||||| || || ||||| || |||||| |||||||| ||||||||| ||| ||||||||||||    
T  34753193 tgttgttgtgtacaaatgtaagttatatgtcccacattggatagaaaagtaaaagttgaacaccttataagtaagaagacccataaacc 34753105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 36522413 - 36522314
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||||||||   | || ||||||||||||||||||||| || ||||| || | |  | ||||||||| |||||||| |||||||| |||||||    
T  36522413 ttgagggggagtgttg---tatgaaagtgtgagttatatgtctcacattggatagaaaaatggaagttgaacattttataagtgagaggaccaataaacc 36522317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 13785794 - 13785732
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaa 247  Q
    |||||||  ||||||||||||||||   |||| |||||||||||||||||| ||||||||||||||    
T  13785794 gactcacatttgagggggagtgttg---tgtggaagtgtgagttatatgtcccaaatcggataaaa 13785732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 41635359 - 41635268
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| |||||  |||| |||||||||||| ||  ||| |||||||||||||| |||||||| ||||||| | |||||| ||||||| ||||    
T  41635359 tgttgttgtgtataagtatgagttatatgtttcccatcagataaaagagtaaatgttgaacaccttataaataagaggatccataaatccat 41635268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 293
Target Start/End: Original strand, 42524719 - 42524797
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||| |||||||||||| |||||||| || |||||| |||||||||||||| | | ||||||| |||||| ||||    
T  42524719 caagtgtgaattatatgtctcacatcggatagaaaagtaaa-gttgaacatcttatgaataagaggactcataaatccat 42524797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 300955 - 301025
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||| |||||||| |||||||||| || ||| ||||||| ||||||||||||| | ||||||||| ||||    
T  300955 tgtgtacaagtgtgggttatatgtcccacatcagataaaacagtaaaggttgaataccttataagtaagag 301025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 5723949 - 5723876
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||||||||||||| || ||||||||||| | |||| ||||||||  ||||| || |||| ||||||    
T  5723949 tgcaagtgtgagttatatgtcccacatcggataaaataataaaagttgaacacattatatgtaagagaacccat 5723876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 36522081 - 36521976
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca-tcttataagttagagga 280  Q
    ||||||| |||||||| ||||||||   || |||||||||||||||||||| || ||| |||| || |||  |||||||||| |||| ||| | ||||||    
T  36522081 gactcacacttgagggagagtgttg---tgcgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttgaacactctt-taaatgagagga 36521986  T
Q  281 cccataaacc 290  Q
    ||||||||||    
T  36521985 cccataaacc 36521976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 2411010 - 2411084
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||  | || ||||| |  |||||| |||||||||||| ||||| |||| ||||||||||    
T  2411010 aagtgtgagttatatgtcctacattggatagagaagtaaaagttgaacatcttgtaagtaagagaacccataaac 2411084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 795249 - 795196
Alignment:
Q  111 caagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagc 164  Q
    |||||| ||||||||| |||||||||||||||  |||||  |||||||||||||    
T  795249 caagcagcaagtggctccttgtgcagcaacggtgatacagacaaagtaaaaagc 795196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 6225047 - 6225104
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataag 272  Q
    |||| |||||||||| || || ||| ||||||||| ||||||||||||| ||||||||    
T  6225047 aagtctgagttatatatcccacatcagataaaagaataaaggttgaacaccttataag 6225104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 9498556 - 9498507
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||| ||||||||| ||||||||| |||||  |||||||||||||||    
T  9498556 acaagcagcaagtggctccttgtgcaggaacggtgatacatgcaaagtaa 9498507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 289
Target Start/End: Original strand, 33747783 - 33747848
Alignment:
Q  224 ttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||| || ||||||||||| |||||||||| || |  |||||||| |||||| ||||||||    
T  33747783 ttatatgtcccacatcggataaaatagtaaaggttaaatactttataagtaagaggatccataaac 33747848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 26591068 - 26590992
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||| ||| ||||  || |||| ||  || ||||||||||||||| ||||||||| |||||| |||||||    
T  26591068 tgcaagtgtgatttaaatgttccatatcgaatcgaaaagtaaaggttgaacaccttataagtaagaggatccataaa 26590992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 6e-34; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 15773162 - 15773267
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||||||| |||||||    
T  15773162 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagaggac 15773261  T
Q  282 ccataa 287  Q
     |||||    
T  15773262 tcataa 15773267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 54018004 - 54017896
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||||  | ||||||||||||||||||||||||||| ||||||||| |||||||    
T  54018004 gactcacacttgagggggagtattgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggac 54017905  T
Q  282 ccataaacc 290  Q
     ||||||||    
T  54017904 tcataaacc 54017896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 110 - 289
Target Start/End: Original strand, 4823541 - 4823732
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccactctaggggagc--------------gactcacgcttgag 195  Q
    ||||||||||||||||| ||||||||| || ||| |||||||||||||||||||||||| ||||||||||||              ||||||| |||||     
T  4823541 acaagcaacaagtggctccttgtgcaggaatggcgatacatgcaaagtaaaaagcttccgctctaggggagcacgttaaagtgatggactcacacttgaa 4823640  T
Q  196 ggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||  || ||||||||||||||||| |||||| ||||||||||| |||||| ||| |||| |||||||||  ||||||||||||||    
T  4823641 ggggagtgttg--gtttgcaagtgtgagttataagtctcacatcggataaaatagtaaaagttaaacaccttataagtaggaggacccataaac 4823732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 31190007 - 31190091
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    ||||| ||||||||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31190007 tgttgttgtgtgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggacccata 31190091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 29645070 - 29644979
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||| ||||||||||| || |||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  29645070 tgttgttgtgtgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaacccat 29644979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 29644756 - 29644658
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||| ||||  ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  29644756 gggggaatgtttttgtgtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaacccataaacccat 29644658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 15772851 - 15772931
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  15772851 gtgtgcaagtgtgagttatatgtcccatatcggataaaagagtaaatgttgaacaccttataagtaagaggacccataaac 15772931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 22304541 - 22304646
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || |||||||||||| |||||||| || ||||||||||| ||||||||||||| | ||||||||| |||||||    
T  22304541 gactcacacttgagggggagtgttg--gtttgcaagtgtgagctatatgtcccacatcggataaaatagtaaaggttgaataccttataagtaagaggac 22304638  T
Q  282 ccataaac 289  Q
    ||||||||    
T  22304639 ccataaac 22304646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 25739593 - 25739506
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||||| |||||||||||||||    
T  25739593 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaac 25739506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 208 - 291
Target Start/End: Original strand, 35946518 - 35946601
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccc 291  Q
    ||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  35946518 tgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaaccc 35946601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 37990827 - 37990720
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||||  |||||||||||||||| ||||| ||||||||||||||||||  || ||||||||||| |||||| |||||||| ||||||||| |||||||    
T  37990827 gactcacagttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggac 37990728  T
Q  282 ccataaac 289  Q
     |||||||    
T  37990727 tcataaac 37990720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 42342556 - 42342465
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||||||||||||||| || ||| |||||||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  42342556 tgttgttgtgtgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaatccat 42342465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 8327900 - 8327981
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||||||||||| |||| ||||||||||    
T  8327900 tgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaacccataaac 8327981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 32462747 - 32462638
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagt-aaaggttgaacatcttataagttagagga 280  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || |||| || ||||||| |||||||||||| ||||||||| ||| ||    
T  32462747 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcgaatgaaagagtaaaaggttgaacaccttataagtaagatga 32462648  T
Q  281 cccataaacc 290  Q
     |||||||||    
T  32462647 tccataaacc 32462638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 33803414 - 33803329
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||| ||||||||||||||| || ||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||    
T  33803414 tgtgtgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccat 33803329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 51886561 - 51886638
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  51886561 tgcaagtgtgagttatatgtctcacatcgaataaaatagtaaaggttgaacatcatataagtaagaggacccataaac 51886638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 293
Target Start/End: Original strand, 25755383 - 25755475
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||| ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||||| ||||||| |||||| ||||    
T  25755383 gtgttgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaatccat 25755475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 37991146 - 37991058
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| ||||| |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||| |||||||| ||||||    
T  37991146 gtgttgttgtgtacaagtgtgagttatatgtctcacattggataaaatagtaaaggttgaacaccttataagtaagaggacctataaac 37991058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 290
Target Start/End: Original strand, 39914242 - 39914330
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||| |||| |||||||||| ||||||| | ||||||||||||||||    
T  39914242 tgttgttgtgtgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaacaccttataaataagaggacccataaacc 39914330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 49336855 - 49336763
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccata 294  Q
    ||||| ||||| ||||||||||||| |||||||| |||||||| || |||||||||||| || ||||||||| ||||||||||||||||||||    
T  49336855 tgttgttgtgtacaagtgtgagttacatgtctcacatcggatagaaaagtaaaggttgaccaccttataagtaagaggacccataaacccata 49336763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 12114730 - 12114639
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||| |||||||| || || |||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||    
T  12114730 tgttgttgtgtgcaagtgtaagttatatatcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccat 12114639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 41359949 - 41359842
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||||    | || |||||||| || ||||||||||||| | ||||||||| |||||||    
T  41359949 gactcacacttaagggggagtgttgttgtgtgcaagtgtgagttat----cccacatcggatacaatagtaaaggttgaataccttataagtaagaggac 41359854  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  41359853 ccataaacccat 41359842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 21832528 - 21832412
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||| ||||||||    ||||||||||||||||||||||| || || ||||| || ||||||||||||||| ||||||||| |||||||    
T  21832528 gactcacacttgaggcggagtgtta---tgtgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagaggac 21832432  T
Q  282 ccataaacccatatccttaa 301  Q
     ||||||| |||| ||||||    
T  21832431 tcataaactcatagccttaa 21832412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 290
Target Start/End: Original strand, 11661846 - 11662029
Alignment:
Q  122 tggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccactctagg-ggagc--------------gactcacgcttgagggggagtgttg 206  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||              ||||||| |||  ||||||||||||    
T  11661846 tggctccttgtgcagcaacggcgatacatgcaaagtaaaaagcttccgctctaggaggagcacgataaagtgatggactcacacttttgggggagtgttg 11661945  T
Q  207 ctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
     ||| || |||||||||||| ||| | || || |||||||||||||||||||||||| |||| |||| ||||| | ||||||||    
T  11661946 ttgtatgtaagtgtgagttaaatgccccacattggataaaagagtaaaggttgaacaccttaaaagtgagaggcctcataaacc 11662029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 289
Target Start/End: Complemental strand, 43346960 - 43346872
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| ||||| ||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  43346960 gtgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaac 43346872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 54018358 - 54018278
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    |||||||||||||||||||||||    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  54018358 tgtgcaagtgtgagttatatgtcctgcatcggataaaagagtaaagattgaacaccttataagtaagaggacccataaacc 54018278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 42342278 - 42342171
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||| | ||||||  || |||||||||||||||||| ||| ||   ||||||||| |||||||    
T  42342278 gactcacacttgagggggagtgttgttgtgtgcaagtgtgattcatatgttccacatcggataaaagagtaaatgttcaatgccttataagtaagaggac 42342179  T
Q  282 ccataaac 289  Q
     |||||||    
T  42342178 tcataaac 42342171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 52634666 - 52634756
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||  ||||||||| ||| |||||||||||||||    
T  52634666 tgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaaga-gacccataaacccat 52634756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 53577354 - 53577441
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| || | || ||| ||||||||    
T  53577354 tgttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaacatcttaaaaataagtggatccataaac 53577441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 22304218 - 22304297
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  22304218 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 22304297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 53118142 - 53118064
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||| |||| |||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||| ||||||    
T  53118142 tgttgttgtgggcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtgagagga 53118064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 293
Target Start/End: Original strand, 39389070 - 39389151
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||||||  | ||||||||||| ||||||||||||||| |||| || | |||||||||||||||||||    
T  39389070 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttaaaactaagaggacccataaacccat 39389151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 1634483 - 1634391
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggata-aaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||| |  ||||||| ||||  |||||||| |||||||||||||||||||    
T  1634483 tgttgctgtgtgcaagtgtgagttatatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaacccat 1634391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 293
Target Start/End: Complemental strand, 39935104 - 39935032
Alignment:
Q  221 gagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||  | ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  39935104 gagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggatccataaacccat 39935032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 50612610 - 50612534
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| ||||||| ||||||| ||||||||| ||||||| ||||||    
T  50612610 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataaa 50612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 32589694 - 32589784
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||||||| ||||||| || ||  ||||||| | ||||||||||||| ||||||||| |||||||||||||||||||    
T  32589694 tgttgttgtgtgcaagtgtgagt-atatgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaacccat 32589784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 33175826 - 33175747
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataa 287  Q
    ||||| |||||||||||||||||||||| ||| |||| || ||||||||||||||| ||||||||| |||| ||||||||    
T  33175826 tgtgtacaagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataagtaagagaacccataa 33175747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 9240122 - 9240230
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||| |||||||||   ||||||||||||||||||||||  || |||||||| |  |||||| | |||||| ||||||||| |||||||    
T  9240122 gactcacacttgaggaggagtgttg---tgtgcaagtgtgagttatatgttccacatcggatagagaagtaaaagctgaacaccttataagtaagaggac 9240218  T
Q  282 ccataaacccat 293  Q
    ||||||| ||||    
T  9240219 ccataaatccat 9240230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 11661525 - 11661602
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagg 279  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| ||||| |||| |||||||||||||| |||||    
T  11661525 tgttggtgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaacggttaaacatcttataagtaagagg 11661602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 32463070 - 32462977
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagt-aaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||| ||||| ||||||||||||||||||| || |||||||| |||||| |||||||||| | ||||||||| ||| ||| |||||||||||    
T  32463070 gtgttgttgtgtacaagtgtgagttatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaacccat 32462977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 37726504 - 37726577
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||| | ||||||||| |||||| ||||    
T  37726504 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaatgttgaataccttataagtaagaggatccat 37726577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 45395815 - 45395730
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||| |||||||| || || |||| ||||||||||||||||| ||||  |||||||| |||||| ||||||||||||    
T  45395815 tgtgtgcaagtgtaagttatatatcccacatcgaataaaagagtaaaggttaaacacgttataagtaagaggatccataaacccat 45395730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 45901702 - 45901791
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaag-agtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| ||||| ||||||||||||||||||| || |||||||||||| |  |||||||||||| ||||||||| ||||||| |||||||    
T  45901702 gtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaagaggacgcataaac 45901791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 33362451 - 33362362
Alignment:
Q  215 aagtgtgagttatatg---tctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatatccttaa 301  Q
    ||||||||||||||||   |||||  |||||||||| | ||||||||||| | ||||||||| ||||||||||||||||||| |||||||    
T  33362451 aagtgtgagttatatgatatctcatgtcggataaaataataaaggttgaataccttataagtaagaggacccataaacccatttccttaa 33362362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 43346640 - 43346706
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatctta 268  Q
    ||||| |||||||||||||||||| |||||| || ||||||||||| ||||||||||||||| ||||    
T  43346640 tgttgttgtgtgcaagtgtgagttgtatgtcccacatcggataaaatagtaaaggttgaacacctta 43346706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 3135224 - 3135151
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaccca 292  Q
    |||||||||||||| || ||||||||||| |||||| |||||||| ||||||||| | || |||||||||||||    
T  3135224 gtgagttatatgtcccacatcggataaaatagtaaatgttgaacaccttataagtaaaagaacccataaaccca 3135151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 22304136 - 22304032
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||| || ||||| ||||| ||||||||||||||||||| || ||| ||||||| ||||||||       |||||||||| || ||||    
T  22304136 gactcacacttgagggagaatgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaagg-------tcttataagtaagcggac 22304044  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  22304043 ccataaacccat 22304032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 44160702 - 44160621
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||| |||||||||| ||| || |||||||| | ||||||||||||| ||||||| | |||||| ||||||||||||    
T  44160702 tgcaagtgtcagttatatgtttcatattggataaaacaataaaggttgaacaccttataaataagaggatccataaacccat 44160621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 42584970 - 42584902
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacc 290  Q
    ||||||||||| || |||||||| |||||||||| ||||||| ||||||||| |||||| |||||||||    
T  42584970 agttatatgtcccacatcggatagaagagtaaagattgaacaccttataagtaagaggatccataaacc 42584902  T

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Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 22303853 - 22303783
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgc-aaagtaaaaagcttccactctagggga 179  Q
    ||||||| |||||||||||||||||||||||||| || || || |||||||||||||||| || |||||||    
T  22303853 acaagcagcaagtggcttcttgtgcagcaacggcgattcaggcaaaagtaaaaagcttccgctttagggga 22303783  T

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Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 7767476 - 7767391
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||| |||| ||||||||||||| || |||||||| || ||||||||||| |||  |||||| | ||||||| |||||||||||    
T  7767476 tgtgtgtaagtctgagttatatgtcccacatcggatagaaaagtaaaggttggacactttataactaagaggactcataaacccat 7767391  T

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Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 3135629 - 3135562
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttat 269  Q
    ||||| ||||| ||||||||||||||||||| ||  || |||||||||||||| |||||||| |||||    
T  3135629 tgttgttgtgtacaagtgtgagttatatgtcccacctcagataaaagagtaaaagttgaacaccttat 3135562  T

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Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 39336391 - 39336310
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || |||||||| ||   |  ||||||||||  |||||||| |||||| ||||||||    
T  39336391 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaagttggaggttgaacactttataagtgagaggatccataaac 39336310  T

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Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 3384427 - 3384347
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||| |||||||||||||| || ||  ||||||| |||| ||||| ||||  |||||||  |||||||||||||||    
T  3384427 gtgtgcaagcgtgagttatatgtcccacatatgataaaacagtataggttaaacactttataaggaagaggacccataaac 3384347  T

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Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 47965077 - 47964992
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    |||||||||||||||||||||||| | | |||||||| || |||  ||||| |||||  ||||||| ||||| | ||||| |||||    
T  47965077 tgtgtgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaacattatataagtgagagggctcataagcccat 47964992  T

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Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 12747914 - 12747878
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    ||||||||||||||||||||||||| || ||||||||    
T  12747914 tgtgtgcaagtgtgagttatatgtcccacatcggata 12747878  T

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Target: scaffold0078 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 5327 - 5438
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||| |||| ||| ||||||||||||||||||||||||  || |||||||| || ||||||||||||||| ||||||||| |||||||    
T  5327 gactcacacttgagggagagttttgttgtgtgcaagtgtgagttatatgttccacatcggatagaacagtaaaggttgaacaccttataagtaagaggac 5426  T
Q  282 ccataaacccat 293  Q
    ||||||||||||    
T  5427 ccataaacccat 5438  T

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Target: scaffold0078; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 4972 - 5059
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||| |||||||||||| |||||| | || |||||||||| || ||||||||||| | | |||||||||||    
T  4972 tgttgttgtgtgcaagtgtgaattatatgtctcacatcggagagaacagtaaaggtttaatatcttataagtaaaaagacccataaac 5059  T

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Target: scaffold0391 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 1294 - 1183
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| || || |||||||||||||||||||||||| ||||||||  | |||||    
T  1294 gactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagaaaaaggac 1195  T
Q  282 ccataaacccat 293  Q
     |||||||||||    
T  1194 tcataaacccat 1183  T

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Target: scaffold0391; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 3173 - 3091
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacat 264  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||||||    
T  3173 gactcacacttgagggggagtgttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacat 3091  T

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Target: scaffold0702 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 670 - 591
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  670 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccat 591  T

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Target: scaffold0702; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 315 - 230
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    ||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  315 gggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 230  T

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Target: scaffold0504 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 10267 - 10192
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||| ||||||||| |||||||||||||||    
T  10267 caagtgtgagttatatgtctcacatcggataaaatggtaaaagttgaacaccttataagtaagaggacccataaac 10192  T

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Target: scaffold0027 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 47350 - 47441
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccat 293  Q
    ||||| ||||||||||||||| ||| |||||||| ||| ||||||| ||||||| ||||||| ||||||||| |||| | ||||||||||||    
T  47350 tgttgatgtgtgcaagtgtgaattaaatgtctcacatccgataaaatagtaaagtttgaacaccttataagtaagagaatccataaacccat 47441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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