View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0498_low_21 (Length: 313)

Name: NF0498_low_21
Description: NF0498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0498_low_21
NF0498_low_21
[»] chr4 (68 HSPs)
chr4 (110-313)||(10246245-10246448)
chr4 (202-301)||(25483326-25483425)
chr4 (182-301)||(52884858-52884976)
chr4 (182-289)||(3244530-3244634)
chr4 (190-301)||(39404376-39404487)
chr4 (182-289)||(49076527-49076634)
chr4 (202-301)||(4955384-4955483)
chr4 (182-287)||(3341098-3341203)
chr4 (110-170)||(10246179-10246239)
chr4 (209-301)||(54017662-54017754)
chr4 (202-301)||(10245910-10246008)
chr4 (182-301)||(22028028-22028147)
chr4 (182-289)||(44620630-44620737)
chr4 (202-288)||(50002416-50002502)
chr4 (208-301)||(2740696-2740789)
chr4 (212-301)||(41370357-41370446)
chr4 (182-278)||(45489421-45489518)
chr4 (190-289)||(43174484-43174584)
chr4 (202-289)||(1731726-1731813)
chr4 (202-301)||(22183331-22183430)
chr4 (184-301)||(36629212-36629326)
chr4 (182-301)||(54108888-54109002)
chr4 (208-286)||(54741260-54741338)
chr4 (200-301)||(36572007-36572108)
chr4 (208-301)||(52884691-52884784)
chr4 (212-301)||(55933191-55933280)
chr4 (182-278)||(44621396-44621492)
chr4 (202-301)||(34646716-34646815)
chr4 (202-288)||(36608741-36608827)
chr4 (215-289)||(50459724-50459798)
chr4 (208-289)||(3340803-3340884)
chr4 (182-301)||(20826190-20826306)
chr4 (208-289)||(41707543-41707624)
chr4 (212-289)||(49880160-49880237)
chr4 (212-301)||(50630822-50630911)
chr4 (212-288)||(6975536-6975612)
chr4 (213-289)||(16889615-16889691)
chr4 (182-287)||(2741044-2741146)
chr4 (202-280)||(4390189-4390267)
chr4 (192-289)||(16888895-16888993)
chr4 (210-301)||(49302902-49302995)
chr4 (208-273)||(3700361-3700426)
chr4 (208-289)||(20825832-20825913)
chr4 (208-289)||(34004663-34004743)
chr4 (208-301)||(39404014-39404107)
chr4 (202-286)||(54017784-54017870)
chr4 (212-301)||(32941190-32941279)
chr4 (194-278)||(44620926-44621011)
chr4 (208-301)||(49076898-49076990)
chr4 (222-283)||(54343086-54343147)
chr4 (208-260)||(45050597-45050649)
chr4 (203-289)||(51768139-51768225)
chr4 (202-301)||(54936190-54936285)
chr4 (200-302)||(22028435-22028539)
chr4 (208-301)||(39792927-39793020)
chr4 (212-288)||(54108538-54108612)
chr4 (237-301)||(18932816-18932880)
chr4 (202-278)||(44620286-44620362)
chr4 (221-301)||(44620362-44620442)
chr4 (212-263)||(50788088-50788139)
chr4 (227-289)||(45496820-45496882)
chr4 (202-263)||(19504695-19504756)
chr4 (208-289)||(28034225-28034306)
chr4 (237-289)||(44621027-44621079)
chr4 (218-273)||(45489809-45489864)
chr4 (235-288)||(39699026-39699079)
chr4 (217-301)||(760194-760278)
chr4 (202-286)||(11348410-11348494)
[»] scaffold0734 (2 HSPs)
scaffold0734 (182-301)||(5747-5866)
scaffold0734 (202-290)||(5386-5474)
[»] chr7 (49 HSPs)
chr7 (182-301)||(7553995-7554114)
chr7 (191-301)||(22566731-22566841)
chr7 (183-301)||(30244241-30244359)
chr7 (182-301)||(37533079-37533196)
chr7 (202-301)||(7517570-7517669)
chr7 (190-301)||(30245055-30245166)
chr7 (182-285)||(30255309-30255412)
chr7 (182-282)||(30244671-30244771)
chr7 (200-301)||(1085685-1085786)
chr7 (190-285)||(30245472-30245567)
chr7 (202-289)||(40094855-40094942)
chr7 (201-289)||(47129084-47129172)
chr7 (214-301)||(6054562-6054649)
chr7 (202-301)||(16569186-16569285)
chr7 (202-301)||(16596377-16596476)
chr7 (202-301)||(22567108-22567206)
chr7 (202-301)||(24177425-24177524)
chr7 (195-289)||(45434619-45434713)
chr7 (203-280)||(36109007-36109084)
chr7 (208-301)||(40230360-40230453)
chr7 (208-300)||(28301613-28301705)
chr7 (183-301)||(1085317-1085436)
chr7 (210-301)||(36939802-36939893)
chr7 (202-289)||(41910675-41910762)
chr7 (208-301)||(8128510-8128603)
chr7 (182-289)||(14681482-14681587)
chr7 (202-289)||(23458-23545)
chr7 (202-289)||(34218115-34218202)
chr7 (202-301)||(45754706-45754804)
chr7 (212-301)||(29157565-29157654)
chr7 (208-301)||(36622956-36623049)
chr7 (202-289)||(36534865-36534952)
chr7 (202-289)||(43241485-43241572)
chr7 (202-289)||(45433231-45433318)
chr7 (219-301)||(11845198-11845280)
chr7 (202-289)||(24838782-24838870)
chr7 (202-289)||(118382-118469)
chr7 (215-289)||(9901648-9901720)
chr7 (220-301)||(19122740-19122820)
chr7 (217-301)||(30032572-30032656)
chr7 (217-300)||(44361534-44361616)
chr7 (215-301)||(37533433-37533519)
chr7 (208-262)||(40094502-40094556)
chr7 (202-255)||(36967344-36967397)
chr7 (208-272)||(41854631-41854694)
chr7 (215-301)||(20599317-20599403)
chr7 (183-301)||(37345890-37346007)
chr7 (133-179)||(37533213-37533259)
chr7 (185-229)||(48243218-48243262)
[»] chr1 (57 HSPs)
chr1 (182-301)||(34364895-34365014)
chr1 (182-301)||(44290527-44290644)
chr1 (182-301)||(26661591-26661710)
chr1 (182-301)||(22077564-22077680)
chr1 (182-301)||(37556081-37556200)
chr1 (182-299)||(41157345-41157462)
chr1 (182-289)||(3537228-3537333)
chr1 (201-301)||(34364496-34364596)
chr1 (202-301)||(41184494-41184593)
chr1 (183-289)||(11977251-11977357)
chr1 (208-298)||(22077900-22077990)
chr1 (208-301)||(17294573-17294666)
chr1 (212-301)||(44290894-44290983)
chr1 (210-301)||(41142370-41142461)
chr1 (202-289)||(41156981-41157068)
chr1 (215-289)||(50052104-50052178)
chr1 (202-294)||(21378117-21378209)
chr1 (208-287)||(45084378-45084457)
chr1 (208-301)||(66541-66634)
chr1 (212-301)||(5320034-5320123)
chr1 (213-301)||(3550721-3550809)
chr1 (182-301)||(48588557-48588674)
chr1 (222-289)||(5528835-5528902)
chr1 (202-289)||(26661979-26662066)
chr1 (202-301)||(29798189-29798288)
chr1 (202-285)||(31767246-31767329)
chr1 (202-289)||(37850681-37850768)
chr1 (208-301)||(3875400-3875493)
chr1 (208-289)||(24600395-24600476)
chr1 (182-301)||(30630707-30630823)
chr1 (212-289)||(32594797-32594874)
chr1 (182-289)||(66168-66274)
chr1 (214-273)||(34649440-34649499)
chr1 (214-301)||(38804424-38804511)
chr1 (208-302)||(44685452-44685547)
chr1 (203-280)||(40082398-40082475)
chr1 (212-301)||(41759483-41759572)
chr1 (201-288)||(39066282-39066369)
chr1 (202-259)||(35154150-35154207)
chr1 (217-289)||(3537680-3537752)
chr1 (218-301)||(5575110-5575193)
chr1 (208-289)||(1187445-1187526)
chr1 (212-301)||(24132054-24132143)
chr1 (110-159)||(26661748-26661797)
chr1 (220-288)||(14318875-14318943)
chr1 (208-278)||(4878799-4878869)
chr1 (239-289)||(4956218-4956268)
chr1 (216-285)||(9955911-9955981)
chr1 (235-289)||(22077191-22077245)
chr1 (208-289)||(1188669-1188750)
chr1 (208-289)||(22793274-22793355)
chr1 (192-263)||(50469188-50469256)
chr1 (190-244)||(22077248-22077299)
chr1 (212-263)||(45494085-45494137)
chr1 (215-282)||(37555733-37555800)
chr1 (182-244)||(50051777-50051837)
chr1 (208-301)||(19283524-19283617)
[»] scaffold0171 (1 HSPs)
scaffold0171 (182-301)||(17525-17644)
[»] chr8 (65 HSPs)
chr8 (182-301)||(9309325-9309444)
chr8 (182-301)||(30359579-30359698)
chr8 (190-301)||(34835187-34835298)
chr8 (202-301)||(30359261-30359360)
chr8 (182-289)||(8918845-8918952)
chr8 (208-289)||(45122138-45122219)
chr8 (201-289)||(8794100-8794188)
chr8 (182-301)||(34835444-34835564)
chr8 (182-301)||(34835710-34835830)
chr8 (190-289)||(45122984-45123081)
chr8 (182-284)||(18372342-18372442)
chr8 (190-298)||(9482676-9482782)
chr8 (182-289)||(3670032-3670137)
chr8 (202-289)||(147441-147528)
chr8 (182-300)||(1013941-1014057)
chr8 (202-301)||(3038359-3038458)
chr8 (214-289)||(25561897-25561972)
chr8 (202-301)||(33113436-33113535)
chr8 (182-289)||(45121737-45121843)
chr8 (219-289)||(70355-70425)
chr8 (182-263)||(147799-147880)
chr8 (208-301)||(1513984-1514077)
chr8 (212-301)||(3669687-3669776)
chr8 (208-289)||(9608741-9608822)
chr8 (208-289)||(41972154-41972235)
chr8 (202-289)||(43274860-43274947)
chr8 (210-301)||(45121979-45122070)
chr8 (210-284)||(18372785-18372859)
chr8 (212-301)||(5420651-5420740)
chr8 (208-298)||(9308973-9309065)
chr8 (182-289)||(40518555-40518659)
chr8 (233-289)||(9483268-9483324)
chr8 (201-301)||(34834865-34834965)
chr8 (214-289)||(40579587-40579662)
chr8 (201-286)||(6876946-6877032)
chr8 (219-289)||(41416252-41416322)
chr8 (212-289)||(1014326-1014403)
chr8 (212-289)||(20870654-20870733)
chr8 (182-289)||(18373012-18373118)
chr8 (222-285)||(25561729-25561792)
chr8 (214-288)||(37544572-37544646)
chr8 (208-301)||(9620745-9620838)
chr8 (215-264)||(32640633-32640682)
chr8 (182-261)||(6731876-6731953)
chr8 (212-301)||(30441081-30441174)
chr8 (237-289)||(45122649-45122701)
chr8 (182-264)||(18371762-18371842)
chr8 (182-256)||(18372485-18372557)
chr8 (217-300)||(20130454-20130536)
chr8 (110-159)||(3669945-3669994)
chr8 (208-289)||(4154747-4154828)
chr8 (249-302)||(9609122-9609175)
chr8 (216-280)||(43398161-43398225)
chr8 (214-289)||(18372684-18372758)
chr8 (208-263)||(20995508-20995563)
chr8 (219-261)||(6651510-6651552)
chr8 (182-303)||(4154348-4154467)
chr8 (216-273)||(18380114-18380171)
chr8 (208-244)||(18645713-18645749)
chr8 (208-289)||(40518065-40518148)
chr8 (242-289)||(18372075-18372122)
chr8 (238-289)||(32305503-32305554)
chr8 (110-159)||(1014095-1014144)
chr8 (208-273)||(12283869-12283934)
chr8 (182-235)||(43274702-43274755)
[»] chr6 (39 HSPs)
chr6 (182-301)||(2578512-2578630)
chr6 (182-301)||(16108033-16108152)
chr6 (182-289)||(29518892-29518997)
chr6 (202-301)||(2579941-2580040)
chr6 (182-299)||(3409632-3409747)
chr6 (212-301)||(35210204-35210293)
chr6 (202-289)||(593790-593877)
chr6 (214-301)||(2377756-2377843)
chr6 (195-289)||(2378111-2378203)
chr6 (182-272)||(2579203-2579293)
chr6 (191-289)||(16454886-16454984)
chr6 (212-301)||(3409259-3409348)
chr6 (182-301)||(10074432-10074548)
chr6 (212-289)||(29518503-29518580)
chr6 (212-289)||(32741179-32741256)
chr6 (202-301)||(16107668-16107767)
chr6 (190-301)||(10074060-10074168)
chr6 (212-289)||(14748419-14748496)
chr6 (212-289)||(26544049-26544126)
chr6 (218-289)||(9062430-9062501)
chr6 (202-301)||(16454565-16454664)
chr6 (214-288)||(5832108-5832182)
chr6 (212-301)||(1846748-1846837)
chr6 (215-288)||(1950267-1950340)
chr6 (212-301)||(3058226-3058315)
chr6 (217-301)||(32460649-32460733)
chr6 (216-301)||(3415462-3415547)
chr6 (208-289)||(10073697-10073776)
chr6 (212-301)||(10911565-10911655)
chr6 (212-289)||(1127360-1127437)
chr6 (218-301)||(2843560-2843644)
chr6 (209-289)||(5958684-5958764)
chr6 (215-289)||(6999877-6999951)
chr6 (182-301)||(2579561-2579677)
chr6 (182-301)||(8481898-8482015)
chr6 (185-289)||(2578916-2579016)
chr6 (208-301)||(6071128-6071221)
chr6 (249-289)||(14789285-14789325)
chr6 (237-285)||(35210503-35210551)
[»] chr5 (55 HSPs)
chr5 (182-301)||(26074582-26074701)
chr5 (182-289)||(26074863-26074970)
chr5 (202-301)||(26075231-26075330)
chr5 (202-301)||(299479-299578)
chr5 (202-301)||(6224186-6224285)
chr5 (182-289)||(13415841-13415947)
chr5 (202-301)||(15370089-15370188)
chr5 (202-293)||(36492294-36492385)
chr5 (202-299)||(40296386-40296483)
chr5 (182-299)||(3295086-3295204)
chr5 (183-301)||(26074215-26074330)
chr5 (218-301)||(41170640-41170723)
chr5 (208-289)||(41632778-41632859)
chr5 (182-301)||(6500795-6500911)
chr5 (214-301)||(18603189-18603276)
chr5 (202-288)||(12662734-12662820)
chr5 (212-301)||(9498723-9498812)
chr5 (212-301)||(32487394-32487482)
chr5 (208-288)||(35150003-35150082)
chr5 (185-299)||(624171-624283)
chr5 (212-301)||(6500451-6500539)
chr5 (212-289)||(27502117-27502194)
chr5 (208-301)||(36568636-36568729)
chr5 (202-301)||(11417046-11417143)
chr5 (202-289)||(25327925-25328012)
chr5 (202-288)||(35914839-35914925)
chr5 (208-289)||(1028598-1028679)
chr5 (208-289)||(3295425-3295505)
chr5 (182-299)||(31509594-31509710)
chr5 (202-289)||(42405677-42405764)
chr5 (182-301)||(15370384-15370491)
chr5 (202-288)||(35167920-35168006)
chr5 (212-301)||(623818-623907)
chr5 (212-293)||(29549332-29549413)
chr5 (217-285)||(38427553-38427620)
chr5 (214-289)||(26074320-26074395)
chr5 (182-301)||(24489275-24489389)
chr5 (214-287)||(7768852-7768925)
chr5 (201-254)||(35150736-35150789)
chr5 (201-254)||(35151027-35151080)
chr5 (182-247)||(13785732-13785794)
chr5 (202-289)||(34753106-34753193)
chr5 (208-278)||(300955-301025)
chr5 (208-282)||(39309680-39309754)
chr5 (202-288)||(41635273-41635359)
chr5 (214-288)||(42524719-42524792)
chr5 (212-285)||(5723876-5723949)
chr5 (224-301)||(33747783-33747860)
chr5 (191-289)||(36522318-36522413)
chr5 (215-289)||(2411010-2411084)
chr5 (182-289)||(36521977-36522081)
chr5 (111-164)||(795196-795249)
chr5 (215-272)||(6225047-6225104)
chr5 (110-159)||(9498507-9498556)
chr5 (212-288)||(26590992-26591068)
[»] chr3 (56 HSPs)
chr3 (110-301)||(4823541-4823744)
chr3 (182-301)||(15773162-15773281)
chr3 (182-289)||(54017897-54018004)
chr3 (182-301)||(22304541-22304658)
chr3 (202-286)||(31190007-31190091)
chr3 (182-301)||(37990708-37990827)
chr3 (209-289)||(15772851-15772931)
chr3 (201-301)||(37991046-37991146)
chr3 (202-289)||(25739506-25739593)
chr3 (202-289)||(29644983-29645070)
chr3 (195-289)||(29644662-29644756)
chr3 (202-288)||(42342470-42342556)
chr3 (208-289)||(8327900-8327981)
chr3 (182-301)||(21832412-21832528)
chr3 (208-289)||(35946518-35946599)
chr3 (212-289)||(51886561-51886638)
chr3 (182-289)||(32462639-32462747)
chr3 (201-301)||(43346860-43346960)
chr3 (201-288)||(25755383-25755470)
chr3 (202-289)||(39914242-39914329)
chr3 (182-301)||(42342159-42342278)
chr3 (202-301)||(49336756-49336855)
chr3 (202-301)||(53577354-53577453)
chr3 (182-301)||(41359834-41359949)
chr3 (208-289)||(33803333-33803414)
chr3 (122-289)||(11661846-11662028)
chr3 (202-289)||(12114643-12114730)
chr3 (202-301)||(52634666-52634764)
chr3 (210-289)||(54018279-54018358)
chr3 (182-263)||(22304218-22304297)
chr3 (202-280)||(53118064-53118142)
chr3 (201-301)||(45901702-45901803)
chr3 (221-301)||(39935024-39935104)
chr3 (212-288)||(50612534-50612610)
chr3 (202-301)||(32589694-32589792)
chr3 (208-287)||(33175747-33175826)
chr3 (202-279)||(11661525-11661602)
chr3 (201-301)||(32462969-32463070)
chr3 (212-285)||(37726504-37726577)
chr3 (212-289)||(39389070-39389147)
chr3 (202-289)||(1634395-1634483)
chr3 (182-288)||(9240122-9240225)
chr3 (202-268)||(43346640-43346706)
chr3 (208-302)||(45395721-45395815)
chr3 (182-301)||(22304024-22304136)
chr3 (222-289)||(42584903-42584970)
chr3 (219-289)||(3135154-3135224)
chr3 (110-179)||(22303783-22303853)
chr3 (212-289)||(44160625-44160702)
chr3 (202-269)||(3135562-3135629)
chr3 (215-289)||(33362374-33362451)
chr3 (208-289)||(7767395-7767476)
chr3 (208-289)||(39336310-39336391)
chr3 (209-289)||(3384347-3384427)
chr3 (208-301)||(47964984-47965077)
chr3 (208-244)||(12747878-12747914)
[»] chr2 (57 HSPs)
chr2 (182-301)||(15880233-15880352)
chr2 (182-289)||(38796299-38796406)
chr2 (182-289)||(37106160-37106265)
chr2 (190-301)||(31468819-31468926)
chr2 (182-289)||(5542706-5542811)
chr2 (182-287)||(7598581-7598684)
chr2 (182-301)||(28531383-28531499)
chr2 (212-301)||(36178674-36178763)
chr2 (212-301)||(41283544-41283633)
chr2 (209-296)||(1769889-1769976)
chr2 (196-299)||(6421369-6421472)
chr2 (202-301)||(28254306-28254405)
chr2 (182-269)||(36785664-36785751)
chr2 (182-289)||(40733487-40733594)
chr2 (182-280)||(29676873-29676971)
chr2 (200-289)||(6712964-6713053)
chr2 (212-301)||(14745736-14745825)
chr2 (182-301)||(40679698-40679814)
chr2 (202-289)||(38796701-38796788)
chr2 (202-300)||(31899496-31899594)
chr2 (212-289)||(962598-962675)
chr2 (212-301)||(37105924-37106013)
chr2 (182-279)||(40733853-40733950)
chr2 (201-301)||(16542438-16542538)
chr2 (208-294)||(37632673-37632759)
chr2 (212-289)||(5543079-5543156)
chr2 (208-301)||(35580793-35580885)
chr2 (212-301)||(42514649-42514738)
chr2 (202-289)||(15511576-15511661)
chr2 (217-289)||(33731653-33731725)
chr2 (182-289)||(36178350-36178455)
chr2 (202-301)||(36005949-36006047)
chr2 (196-301)||(14745363-14745466)
chr2 (208-301)||(5367451-5367544)
chr2 (202-289)||(31259697-31259787)
chr2 (197-260)||(6421289-6421352)
chr2 (220-299)||(29676543-29676622)
chr2 (182-301)||(30313149-30313266)
chr2 (182-247)||(3673055-3673120)
chr2 (209-301)||(7598225-7598317)
chr2 (182-301)||(30323435-30323553)
chr2 (203-301)||(12529097-12529195)
chr2 (228-301)||(6422126-6422199)
chr2 (208-285)||(9231245-9231322)
chr2 (228-301)||(28254181-28254254)
chr2 (208-301)||(23346231-23346325)
chr2 (237-301)||(36178240-36178304)
chr2 (208-301)||(16590884-16590972)
chr2 (182-301)||(29873606-29873724)
chr2 (223-285)||(40163458-40163520)
chr2 (208-289)||(33561532-33561613)
chr2 (205-301)||(29874092-29874188)
chr2 (191-289)||(33953852-33953947)
chr2 (182-289)||(41678448-41678554)
chr2 (185-232)||(40734251-40734298)
chr2 (110-168)||(29676787-29676844)
chr2 (110-159)||(14745517-14745566)
[»] scaffold0078 (2 HSPs)
scaffold0078 (182-301)||(5327-5446)
scaffold0078 (202-300)||(4972-5070)
[»] scaffold0391 (2 HSPs)
scaffold0391 (182-301)||(1175-1294)
scaffold0391 (182-264)||(3091-3173)
[»] scaffold0702 (2 HSPs)
scaffold0702 (214-301)||(583-670)
scaffold0702 (195-282)||(230-315)
[»] scaffold0504 (1 HSPs)
scaffold0504 (214-290)||(10191-10267)
[»] scaffold0027 (1 HSPs)
scaffold0027 (202-301)||(47350-47449)


Alignment Details
Target: chr4 (Bit Score: 180; Significance: 3e-97; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 110 - 313
Target Start/End: Original strand, 10246245 - 10246448
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccactctaggggagcgactcacgcttgagggggagtgttgctg 209  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  10246245 acaagcaacaagtggcttcttgtgcagcaatggctatacatgcaaagtaaaaagcttccactctaggggagcgactcacgcttgagggggagtgctgttg 10246344  T
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaatactgtcc 309  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10246345 tgtgcaagtgtctgttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaatactgtcc 10246444  T
Q  310 tttt 313  Q
    ||||    
T  10246445 tttt 10246448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 25483326 - 25483425
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| |||||||| ||| |||||||    
T  25483326 tgttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagaggatccataaacccattgccttaa 25483425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 52884858 - 52884976
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||     
T  52884858 gactcacacttgagggg-agtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggat 52884956  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  52884957 ccataaacccattgccttaa 52884976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 3244634 - 3244530
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||||||| |||| ||||||||   |||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||| |||||||    
T  3244634 gactcacgcttaagggagagtgttg---tgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagaggac 3244538  T
Q  282 ccataaac 289  Q
    ||||||||    
T  3244537 ccataaac 3244530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 39404376 - 39404487
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||| || ||| ||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  39404376 cttgaggaggagtgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagaggacccataaac 39404475  T
Q  290 acatagccttaa 301  Q
      ||||||||||    
T  39404476 ctatagccttaa 39404487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 49076634 - 49076527
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||||  || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  49076634 gactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacaccttataagtaagaggac 49076535  T
Q  282 ccataaac 289  Q
    | ||||||    
T  49076534 ctataaac 49076527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 4955483 - 4955384
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| ||||||||| ||||||| ||||||| ||| |||||||    
T  4955483 tgttgttgtgtgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagaggactcataaacccattgccttaa 4955384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 3341098 - 3341203
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||  |||||||| ||||||||||||||||||||||||| || || ||||||||||||||||||| ||||  |||||||| |||||||    
T  3341098 gactcacacttgaggcagagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactttataagtaagaggac 3341197  T
Q  282 ccataa 287  Q
    ||||||    
T  3341198 ccataa 3341203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 10246179 - 10246239
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccac 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10246179 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccac 10246239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 54017754 - 54017662
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||||||||||| ||  || ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  54017754 gtgtgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaa 54017662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 10245910 - 10246008
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||||||||||||||||| | || ||||||||||||||||||||||||||| ||||||||| |||||| |||||||| || ||||||||    
T  10245910 tgttgttgtgtgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaagagga-ccataaacccaaagccttaa 10246008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 22028147 - 22028028
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||| || |||||| ||||||||||||||| ||||||||| || ||||||||||| |  |||||||||||| ||||||||| |||||||    
T  22028147 gactcacacttaaggaggggtgttgttgtgtgcaagtgtgacttatatgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagaggac 22028048  T
Q  282 ccataaacacatagccttaa 301  Q
    ||||||||| || |||||||    
T  22028047 ccataaacatattgccttaa 22028028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 44620630 - 44620737
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||| ||||||| | ||||||||||||||||||||||||| || ||||||| ||| |||| ||||||||||  |||||||| |||||||    
T  44620630 gactcacacttgaggtggagtgtcgttgtgtgcaagtgtgagttatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagaggac 44620729  T
Q  282 ccataaac 289  Q
    ||||||||    
T  44620730 ccataaac 44620737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 50002416 - 50002502
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  || ||||| ||||||||||||||    
T  50002416 tgttgttgtttgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaa 50002502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 2740696 - 2740789
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||| |||||||| |||||| || ||||||||    
T  2740696 tgtgtgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctataaacccagagccttaa 2740789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 41370357 - 41370446
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||| | ||||||||| ||||||||||||||| ||| |||||||    
T  41370357 tgcaagtgtgagttatatgtcccaaatcggataaaatagtaaatgttgaaaaccttataagtaagaggacccataaacccattgccttaa 41370446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 45489518 - 45489421
Alignment:
Q  182 gactcacgcttgaggggg-agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||||| |||||||||| ||||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| | ||||||| ||||    
T  45489518 gactcacacttgaggggggagtgttgttgtgtacaagtgtgaattatatgtctcacatcggataaaagagtaaaggttgaacaccatataagtaagag 45489421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 190 - 289
Target Start/End: Original strand, 43174484 - 43174584
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggat-aaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||||||| ||||| ||||||||||||||||| | || ||| ||| |||||||||||||||||||| ||||||||| ||||||| ||||||    
T  43174484 cttgagggggagtgttgttgtgtacaagtgtgagttatatgccacacatcagataaaaagagtaaaggttgaacaccttataagtaagaggacacataaa 43174583  T
Q  289 c 289  Q
    |    
T  43174584 c 43174584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 1731813 - 1731726
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||| ||||||||||||||| || ||| ||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  1731813 tgttgttgtgtgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaac 1731726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 22183430 - 22183331
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| |||||||||||||||||||||| || || |||||||||||||||||| ||||||||  |||||||| | ||||||||||||| ||| |||||||    
T  22183430 tgttgttgtgtgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaacccattgccttaa 22183331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 36629212 - 36629326
Alignment:
Q  184 ctcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccc 283  Q
    ||||| |||||||||||||||||   ||| ||||||||||||||||||| || |||||||| || |||||| ||| |||| ||||||||| |||||||||    
T  36629212 ctcacacttgagggggagtgttg---tgttcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaagaggaccc 36629308  T
Q  284 ataaacacatagccttaa 301  Q
    |||||| ||| |||||||    
T  36629309 ataaactcattgccttaa 36629326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 54108888 - 54109002
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| |||||||||||||   ||||||||||| ||||||  ||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  54108888 gactcacacttaagggggagtgttg---tgtgcaagtgtcagttat--gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 54108982  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  54108983 ccataaacccattgccttaa 54109002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 54741338 - 54741260
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    ||||||||||||||| |||||||||||| |||||||| || ||||||||||||||| ||||||||| ||||||||||||    
T  54741338 tgtgtgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccata 54741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 36572007 - 36572108
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctt 299  Q
    ||||||| ||||| ||||||||||||||||||| || |||| ||||||||||||| |||||||| ||||||||| ||| ||||||||||  ||| |||||    
T  36572007 agtgttgttgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaatccattgcctt 36572106  T
Q  300 aa 301  Q
    ||    
T  36572107 aa 36572108  T

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Target: chr4; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 52884691 - 52884784
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||| || | |||||| ||| |||||||    
T  52884691 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagatgatcgataaacccattgccttaa 52884784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 55933280 - 55933191
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||||||||  | ||||||||||| ||||| ||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  55933280 tgcaagtgtgagttatatgtcctacatcggataaaatagtaagggttgaacaccttataagtaagaggacccataaacccattgccttaa 55933191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 44621396 - 44621492
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||||||  | || |||||||| |||||||||| |||| ||||||||| ||||    
T  44621396 gactcacacttgagggggagtgtcgttgtgtgcaagtgtgagttatatgtccaacatgggataaaacagtaaaggttaaacaccttataagtaagag 44621492  T

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Target: chr4; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 34646815 - 34646716
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||| |||||||| ||||||| | ||||||| ||||||| ||| |||||||    
T  34646815 tgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaactcattgccttaa 34646716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 36608827 - 36608741
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||||||||||  | |||||||||||||||||| |||||||| || |||||| |||||| |||||||    
T  36608827 tgttgttgtgtgcaagtgtgagttatatgtccaacatcggataaaagagtaaaagttgaacacctcataagtaagaggatccataaa 36608741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 50459724 - 50459798
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||  || ||||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  50459724 aagtgtgagttatatgttccacatcggttaaaagagtaaaggttgaacatcttataagtaagaggactcataaac 50459798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 3340803 - 3340884
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| |  ||| ||| |||||||||||||||| || ||||||||| |||||||||||||||    
T  3340803 tgtgtgcaagtgtgagttatatgtcccgcatcagatgaaagagtaaaggttgagcaccttataagtaagaggacccataaac 3340884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 20826190 - 20826306
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||    |||  || ||||||||||||||| || ||||||||||| |||||| ||||||||  |||||||| |||| ||    
T  20826190 gactcacacttgagggggagtgtta---tgtagaaatgtgagttatatgtcccacatcggataaaatagtaaaagttgaacacgttataagtaagagaac 20826286  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| |||||||||||    
T  20826287 ccataaacccatagccttaa 20826306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 41707624 - 41707543
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| | ||||||| | || ||||||||||    
T  41707624 tgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccatataagtaaaagaacccataaac 41707543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 49880160 - 49880237
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || || | |||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  49880160 tgcaagtgtgagttatatgtcccacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 49880237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 50630911 - 50630822
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||| ||||||||||||||  | ||||||||||| |||||||||||||||  |||||||| ||||||||||||||| ||| |||||||    
T  50630911 tgcaagcgtgagttatatgtcctacatcggataaaatagtaaaggttgaacacattataagtaagaggacccataaacccattgccttaa 50630822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 6975612 - 6975536
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||| ||||||| ||||||    
T  6975612 tgcaaatgtgagttatatgtctcacatccgataaaatagtaaaggttgaatatcttataagtaagaggactcataaa 6975536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 16889691 - 16889615
Alignment:
Q  213 gcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| | ||||||||| ||||||  |||||||    
T  16889691 gcaagtgtgagttatatgtctcaaatcggatagaaaagtaaaggttgaataccttataagtaagaggattcataaac 16889615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 2741044 - 2741146
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||| ||||||||||    ||||||||||||||||||||||| || ||| |||| || ||||||||||||| | ||||||||| |||||||    
T  2741044 gactcacacttgaaggggagtgtta---tgtgcaagtgtgagttatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagaggac 2741140  T
Q  282 ccataa 287  Q
    ||||||    
T  2741141 ccataa 2741146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 4390267 - 4390189
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||| ||||||||||||||||||| || || || ||| ||||||||||||||||||||||| ||||||||| ||||||    
T  4390267 tgttgttgtgtgcaagtgtgagttacatatcccacatcagataaaagagtaaaggttgaacaccttataagtaagagga 4390189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 16888993 - 16888895
Alignment:
Q  192 tgagggggagtgttgctgtgtg-caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||| ||||||| |||||| ||||||||||||||||||| || |||||||| || ||||||||||||| | ||||||||| |||| ||| ||||||    
T  16888993 tgaggggaagtgttgttgtgtggcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaacctataaac 16888895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 210 - 301
Target Start/End: Original strand, 49302902 - 49302995
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttat--aagttagaggacccataaacacatagccttaa 301  Q
    |||| |||||||||||||||||| || |||  |||||| |||||||||||||||||||||  |||| ||||||||||||||| ||| |||||||    
T  49302902 tgtgtaagtgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaacatcttataaaagtaagaggacccataaacccattgccttaa 49302995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 3700361 - 3700426
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagt 273  Q
    |||||||||||||||||||||||||  | |||||||||||||||||| |||||||| |||||||||    
T  3700361 tgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagt 3700426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 20825832 - 20825913
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||| ||||||||||||||  || ||||||||||||||||||||||||||| ||||||| | |||| ||||||||||    
T  20825832 tgtgtacaaatgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataaataagagcacccataaac 20825913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 34004743 - 34004663
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || ||  ||||||| | ||||||||||||| ||||||||| |||||||||||||||    
T  34004743 tgtgtgcaagtgtgagttatatgtcacacatatgataaaa-actaaaggttgaacaacttataagtaagaggacccataaac 34004663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 39404014 - 39404107
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| |||||||||||||||||||  | || | ||||||||||||||||||||||  |||||||| ||||||| ||||||| |||||| ||||    
T  39404014 tgtgtacaagtgtgagttatatgtcctacattgaataaaagagtaaaggttgaacactttataagtaagaggactcataaactcatagcattaa 39404107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 54017870 - 54017784
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctc--aaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    ||||| ||||||||| |||||||||||| | ||  | ||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  54017870 tgttgttgtgtgcaaatgtgagttatatatatcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccata 54017784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 32941279 - 32941190
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||||||||| | |||||| | || ||||||||||||||| ||||||| | ||||| | ||||||| ||| |||||||    
T  32941279 tgcaagtgtgagttatatgtcttacatcggaaagaacagtaaaggttgaacaccttataaataagagggctcataaactcattgccttaa 32941190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 44620926 - 44621011
Alignment:
Q  194 agggggagtgttgctgtgtgcaagtgtgagttatatgtctcaa-atcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||||||||||| ||||  ||||||||||||| ||||| ||| |||||||||||  |||||||||||||| ||||||||| ||||    
T  44620926 agggggagtgttgttgtggacaagtgtgagttagatgtcccaacatcggataaaactgtaaaggttgaacaccttataagtaagag 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 49076990 - 49076898
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||||  || || || ||||| ||||||||||||||| ||||| ||| |||| |||||||||| |||| ||||||    
T  49076990 tgtgtgcaagtgtgagttatatgttccatattggctaaaatagtaaaggttgaacaccttat-agtaagagaacccataaacccataaccttaa 49076898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 54343147 - 54343086
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccc 283  Q
    ||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  54343147 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccc 54343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 45050597 - 45050649
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttga 260  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  45050597 tgtgtgcaagtgtgagttatatgtctcacatcaaataaaagagtaaaggttga 45050649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 51768225 - 51768139
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||| ||||||||| |||||||||||||||  | |||| ||| ||||||||| |||||||| ||||||| | ||||||| |||||||    
T  51768225 gttgttgtgtgcaaatgtgagttatatgtcctatatcgaatataagagtaaatgttgaacaccttataaataagaggactcataaac 51768139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 54936190 - 54936285
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| ||||||||||||||    | || ||| ||||||| ||||||||||||||| ||| ||||| ||||||||||||||| ||| |||||||    
T  54936190 tgttgttgtgtacaagtgtgagttat----cccacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccattgccttaa 54936285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 302
Target Start/End: Complemental strand, 22028539 - 22028435
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagag--taaaggttgaacatcttataagttagaggacccataaacacatagcc 297  Q
    ||||||| ||||||||||||| | |||||||||  | ||||||||||| |   ||||||||||||| ||||| ||| ||||||||||||||| ||| | |    
T  22028539 agtgttgttgtgtgcaagtgttacttatatgtcctacatcggataaaaaaaaataaaggttgaacaccttattagtaagaggacccataaactcattgtc 22028440  T
Q  298 ttaat 302  Q
    |||||    
T  22028439 ttaat 22028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 39793020 - 39792927
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||||||||||||| || ||| |||| || |||||| |||||||| ||||||||  |||||| || ||||| ||| |||||||    
T  39793020 tgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataagaaagaggaaccgtaaactcattgccttaa 39792927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 54108538 - 54108612
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||||||  ||| || || |||||||| ||||||||||||||| ||||||||| | ||||||||||||    
T  54108538 tgcaagtgtgagttat--gtcccatataggataaaatagtaaaggttgaacaccttataagtaaaaggacccataaa 54108612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 18932880 - 18932816
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||| ||||||||||||| | ||||||| | ||||||||||||||| ||| |||||||    
T  18932880 atcggataaaatagtaaaggttgaataccttataaataagaggacccataaacccattgccttaa 18932816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 44620286 - 44620362
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||| ||||| ||| | ||||||||||||| || || |||||||| ||||||||||||||| ||||||||| ||||    
T  44620286 tgttgttgtgtacaaatatgagttatatgtcccacatgggataaaatagtaaaggttgaacaccttataagtaagag 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 301
Target Start/End: Original strand, 44620362 - 44620442
Alignment:
Q  221 gagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||  || ||||||||||| ||||||||||||||| ||||||| | ||||  ||||||||| ||| |||||||    
T  44620362 gagttatatgttccacatcggataaaacagtaaaggttgaacaccttataaataagagagcccataaacccattgccttaa 44620442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 50788139 - 50788088
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||||| ||||||||||| || ||||||||||| |||||||||||||||    
T  50788139 tgcaagtgtaagttatatgtcccacatcggataaaatagtaaaggttgaaca 50788088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 45496820 - 45496882
Alignment:
Q  227 tatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| || |||||||||||  |||||||||||||| ||||||||| |||||||| ||||||    
T  45496820 tatgtcccacatcggataaaatcgtaaaggttgaacaccttataagtaagaggacctataaac 45496882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 19504695 - 19504756
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||| ||||| ||||| ||||||||||||| || ||||||||||| |||||| ||||||||    
T  19504695 tgttgttgtgtacaagtatgagttatatgtcccatatcggataaaatagtaaaagttgaaca 19504756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 28034225 - 28034306
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||| ||||||||| |  |||||||| || |||  ||||||||||  |||||||| |||| ||||||||||    
T  28034225 tgtgtgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataagtgagagaacccataaac 28034306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 44621027 - 44621079
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||| | |||||||    
T  44621027 atcggataaaacagtaaaggttgaacaccttataagtaagagggcacataaac 44621079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 45489864 - 45489809
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagt 273  Q
    |||||||||||||| ||| || |||||||||||||||| ||||| ||| |||||||    
T  45489864 tgtgagttatatgtatcacattggataaaagagtaaagattgaatatcatataagt 45489809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 39699079 - 39699026
Alignment:
Q  235 aaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    |||||||||| || |||||||||||||||| || ||||| |||||| |||||||    
T  39699079 aaatcggatataaaagtaaaggttgaacatattctaagtaagaggatccataaa 39699026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 760194 - 760278
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||| || |||| ||| || | | ||||||||  |  |||||||| ||||||||||||||| ||| |||||||    
T  760194 gtgtgagttatatgtcccacatcgaatagaaaaatgaaggttgagaactttataagtgagaggacccataaactcattgccttaa 760278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 11348494 - 11348410
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    ||||| ||||||||| ||||||||||||||   | ||| ||||||| |||  ||||||||||  |||||||| |||||| |||||    
T  11348494 tgttgttgtgtgcaattgtgagttatatgttctacatcagataaaatagtggaggttgaacactttataagtgagaggatccata 11348410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 5747 - 5866
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  5747 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 5846  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  5847 ccataaacccattgccttaa 5866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 290
Target Start/End: Original strand, 5386 - 5474
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaca 290  Q
    ||||| |||||||||||||||||||||||||  | ||||||||||| ||||||||||||||| ||||||||| ||||| ||||||||||    
T  5386 tgttgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagggcccataaaca 5474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 6e-40; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 7553995 - 7554114
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||     
T  7553995 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggat 7554094  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| |||||||||||    
T  7554095 ccataaacccatagccttaa 7554114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 191 - 301
Target Start/End: Complemental strand, 22566841 - 22566731
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaca 290  Q
    |||||||||||||||| ||| ||||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||| |||||||||||||||     
T  22566841 ttgagggggagtgttgttgtatgcaagtgtgagtaatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacc 22566742  T
Q  291 catagccttaa 301  Q
    ||| |||||||    
T  22566741 cattgccttaa 22566731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 183 - 301
Target Start/End: Original strand, 30244241 - 30244359
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||| | ||||||||| |||||||     
T  30244241 actcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagaggact 30244340  T
Q  283 cataaacacatagccttaa 301  Q
    ||||||| ||| |||||||    
T  30244341 cataaacccattgccttaa 30244359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 37533196 - 37533079
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||| || || |||||||| ||||||||||||||| ||||||||| |||||||    
T  37533196 gactcacgcttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggac 37533099  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  37533098 ccataaactcattgccttaa 37533079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 7517570 - 7517669
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  7517570 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 7517669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 30245055 - 30245166
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||| ||||| ||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  30245055 cttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagacgacccataaac 30245154  T
Q  290 acatagccttaa 301  Q
     ||| |||||||    
T  30245155 tcattgccttaa 30245166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 30255309 - 30255412
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||||||| || ||||||||||||||||||||||||||| ||||||||| ||||| |    
T  30255309 gactcacacttgagggggagtgttgttgtgtgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagggc 30255408  T
Q  282 ccat 285  Q
    ||||    
T  30255409 ccat 30255412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 30244671 - 30244771
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||| | |||||||    
T  30244671 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataaataagaggac 30244770  T
Q  282 c 282  Q
    |    
T  30244771 c 30244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 1085786 - 1085685
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctt 299  Q
    ||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||| ||| |||||    
T  1085786 agtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgcctt 1085687  T
Q  300 aa 301  Q
    ||    
T  1085686 aa 1085685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 190 - 285
Target Start/End: Original strand, 30245472 - 30245567
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||| ||||| |||||    
T  30245472 cttgagggggactgttgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttgaacaccttataagtaagagggcccat 30245567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 40094942 - 40094855
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  40094942 tgttgttgtgtgcaagtgtgagttatatgtctcacatcgaataaaagagtaaaggttcaacaccttataagtaagaggacccataaac 40094855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 47129084 - 47129172
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  47129084 gtgttgttgtgcacaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagaggacccataaac 47129172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 301
Target Start/End: Original strand, 6054562 - 6054649
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||| |||||||||||||| ||||||||||| |||||| |||||||| ||||||||| ||||||||||||||||||| |||||||    
T  6054562 caagtgttagttatatgtctcacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaacacattgccttaa 6054649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 16569186 - 16569285
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||| |||||||||||||||||||||||| |||||||| || ||||||||||||| | ||||||||| ||||||||||||||| ||| |||||||    
T  16569186 tgttgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaa 16569285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 16596476 - 16596377
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||| |||||||||||||||||||||||| |||||||| || ||||||||||||| | ||||||||| ||||||||||||||| ||| |||||||    
T  16596476 tgttgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaa 16596377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 22567206 - 22567108
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||| ||||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  22567206 tgttgttgtatgcaagtgtgagtaatatgtc-cacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaa 22567108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 24177425 - 24177524
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||||| ||||||||||||| || |||||||||||||||||||| |||||| ||||||||| || |||||||||||| ||| |||||||    
T  24177425 tgttgttgtgtgcaagtatgagttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagtaagcggacccataaacccattgccttaa 24177524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 195 - 289
Target Start/End: Original strand, 45434619 - 45434713
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||| ||||| ||||||| ||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  45434619 gggggggtgttgttgtgtacaagtgtaagttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagaggacccataaac 45434713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 36109084 - 36109007
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  36109084 gttgttgtgtgcaagtgtgagttatatttctcacatcggataaaagagtaaaggttgaacaccttataagtaagagga 36109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 40230453 - 40230360
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||| ||||||||||| || |||| |||||| |||||| |||||||||||||||||| ||||||||||||||| ||||| |||||    
T  40230453 tgtgtgcaagtgtaagttatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagaggacccataaacccatagtcttaa 40230360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 28301705 - 28301613
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctta 300  Q
    |||||||||||||||||||||||||||| |||||||| || |||||| | |||||| ||||||||| ||||||||||||||| ||| ||||||    
T  28301705 tgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaagctgaacaccttataagtaagaggacccataaacccattgcctta 28301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 301
Target Start/End: Complemental strand, 1085436 - 1085317
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttat-atgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||| ||||| ||||||||||| |||||||||||||||||| | ||||| || ||||||||||| |||||| |||||||| || |||||| |||| ||    
T  1085436 actcacacttgaaggggagtgttgttgtgtgcaagtgtgagtttttatgtcccatatcggataaaatagtaaaagttgaacaactcataagtaagagaac 1085337  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  1085336 ccataaactcattgccttaa 1085317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 210 - 301
Target Start/End: Complemental strand, 36939893 - 36939802
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||| ||||||| |||||| |||||| |||||||| ||||||||| ||||||||||||||  ||| |||||||    
T  36939893 tgtgcaagtgtgagttatatgtcccaaatcgtataaaatagtaaaagttgaacaccttataagtaagaggacccataaatccattgccttaa 36939802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 41910762 - 41910675
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||||| | ||||||| | |||||||||||||||    
T  41910762 tgttgttgtgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagaggacccataaac 41910675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 8128603 - 8128510
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||||| || |||||||| || | ||||||||||||| |||||| || ||||||||||||||| |||| ||||||    
T  8128603 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaaataaaggttgaacaccttatatgtaagaggacccataaacccataaccttaa 8128510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 14681482 - 14681587
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||| ||||||||||| || ||| ||||||| ||||||||||||||| ||| ||||| ||||| |    
T  14681482 gactcacacttgagggggagtgttg--gtttgcaagtgtaagttatatgtcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagagggc 14681579  T
Q  282 ccataaac 289  Q
    ||||||||    
T  14681580 ccataaac 14681587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 23545 - 23458
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||| ||||||||||||||  || |||||||| || ||||||||||||||| ||||||||| |||||||||||||||    
T  23545 tgttgttgtgtgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaac 23458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 34218202 - 34218115
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||| ||| |||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||| ||||||| |||||||    
T  34218202 tgttgttgtgtacaaatgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaac 34218115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 45754706 - 45754804
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||| |||||||| ||||||||| ||| ||| ||||||| |||||||||||    
T  45754706 tgttgttgtgtacaagtgtgagttatatgtc-cacatcggataaaatagtaaatgttgaacaccttataagtaagatgactcataaacccatagccttaa 45754804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 29157565 - 29157654
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| || | ||||||||| ||||||||||||||| ||||||||| ||| ||||||||||  ||| |||||||    
T  29157565 tgcaagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagtaagacgacccataaatccattgccttaa 29157654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 36622956 - 36623049
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||| ||||||||  ||||| |||||||  ||| |||||||    
T  36622956 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataagtaggaggatccataaatccattgccttaa 36623049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 36534952 - 36534865
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||| | ||||||||| ||  |||||||||| |||| |||||||||| ||||||||| |||||||||||||||    
T  36534952 tgttgttgtgtgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaac 36534865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 43241485 - 43241572
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||||||||  || ||||||||||| | ||||||||||||| ||||||||| | ||||| |||||||    
T  43241485 tgttgttgtgtgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataagtaaaaggactcataaac 43241572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 45433231 - 45433318
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||| |||||||||||||||||   || ||||||||||||||||||||||||||| ||||||||| |||| || |||||||    
T  45433231 tgttgttgtgtacaagtgtgagttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaac 45433318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 219 - 301
Target Start/End: Original strand, 11845198 - 11845280
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||  || ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||  ||| |||||||    
T  11845198 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaa 11845280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 24838870 - 24838782
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttag-aggacccataaac 289  Q
    ||||| |||||  |||||| |||||||||||||| |||| |||||||||||||||||||||| ||||||||| || |||| ||||||||    
T  24838870 tgttgttgtgtataagtgtaagttatatgtctcacatcgaataaaagagtaaaggttgaacaccttataagtaagaaggatccataaac 24838782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 118469 - 118382
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||| ||||||||||| || ||| |||| || ||||||||||||||| || |||||| |||||| ||||||||    
T  118469 tgttgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaagaggatccataaac 118382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 9901648 - 9901720
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||||||||| | ||||||| ||||||||    
T  9901648 aagtgtgagttatatgtc-cacatcggataaaacagtaaaggttgaacatcttatacg-tagaggatccataaac 9901720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 19122740 - 19122820
Alignment:
Q  220 tgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||| ||||||  ||| |||||||    
T  19122740 tgagttatatgtc-cacatcggataaaatagtaaaggttgaacaccttataagtaagaggactcataaatccattgccttaa 19122820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 30032572 - 30032656
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||| || |||| ||||||||||||  |||||||| ||||||||| |||| | ||||||||  ||||||||||    
T  30032572 gtgtgagttatatgtcccacatcgaataaaagagtaagtgttgaacaccttataagtaagagtatccataaacctatagccttaa 30032656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 44361616 - 44361534
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctta 300  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||| ||| ||||| ||| || |||||||| |||| |||||    
T  44361616 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaacacctt-taagtaagatgatccataaacccataacctta 44361534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 37533519 - 37533433
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||||   | || | |||||| ||||||||||||||| ||||||||| ||||||||||||||  ||| |||||||    
T  37533519 aagtgtgagttatatgttctacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaa 37533433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 40094556 - 40094502
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaac 262  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||||||||||||    
T  40094556 tgtgtgcaagtgtgagttatatgtccaacatcagataaaagagtaaaggttgaac 40094502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 36967397 - 36967344
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaag 255  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  36967397 tgttgttgtgtacaagtgtgagttatatgtctcacatcggataaaaaagtaaag 36967344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 41854631 - 41854694
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataag 272  Q
    ||||||||||| ||||||||||||| || ||| | ||||||||||||||||||||| ||||||||    
T  41854631 tgtgtgcaagtatgagttatatgtcccacatcag-taaaagagtaaaggttgaacaccttataag 41854694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 20599317 - 20599403
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||||| || ||||||||||| |||||||| | ||||  |||||| | |||||||  |||||| ||| |||||||    
T  20599317 aagtgtgagttatatgtcccatatcggataaaaaagtaaaggataaacactttataaataagaggacatataaactcattgccttaa 20599403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 301
Target Start/End: Original strand, 37345890 - 37346007
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaat--cggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    |||||| ||||| |||||||||||   |||||||||||||||||||| | ||| ||  | |||| || |||  ||||| ||||| |||||||| ||| ||    
T  37345890 actcacacttgaaggggagtgttg---tgtgcaagtgtgagttatatatgtcatatatctgatagaaaagtggaggttaaacattttataagtgagaaga 37345986  T
Q  281 cccataaacacatagccttaa 301  Q
    |||||||||| || |||||||    
T  37345987 cccataaacatattgccttaa 37346007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 37533259 - 37533213
Alignment:
Q  133 gcagcaacggctatacatgcaaagtaaaaagcttccactctagggga 179  Q
    ||||||||||| |||||  ||||||||||||||||| ||||||||||    
T  37533259 gcagcaacggcgatacagacaaagtaaaaagcttccgctctagggga 37533213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 48243262 - 48243218
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatat 229  Q
    |||| ||||||||||||||||| ||||| ||||| ||||||||||    
T  48243262 tcacacttgagggggagtgttgttgtgtacaagtctgagttatat 48243218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 34364895 - 34365014
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| | ||||||||||||| ||||||||| |||||||    
T  34364895 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaataataaaggttgaacaccttataagtaagaggac 34364994  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| |||||||||||    
T  34364995 ccataaacccatagccttaa 34365014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 44290644 - 44290527
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| |||||||    
T  44290644 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggac 44290547  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  44290546 ccataaacccattgccttaa 44290527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 26661710 - 26661591
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||||||||||| ||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||| |||||||    
T  26661710 gactcacacttaagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggac 26661611  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  26661610 ccataaactcattgccttaa 26661591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 22077680 - 22077564
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||   |||||||||||||||||||||||||| |||||||| || ||||||||||||||| ||||||||| |||||||    
T  22077680 gactcacacttgagggggagtgttg---tgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggac 22077584  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| | |||||||||    
T  22077583 ccataaactcgtagccttaa 22077564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 37556081 - 37556200
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggat-aaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||| ||||||    
T  37556081 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaagagga 37556180  T
Q  281 cccataaacacatagccttaa 301  Q
     |||||||| |||||||||||    
T  37556181 -ccataaacccatagccttaa 37556200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 41157345 - 41157462
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||||||| ||| ||||||||||||||||||||||||| || ||| |||||||||||||| |||||||| ||||||||| |||||||    
T  41157345 gactcacacttaagggggagtattgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagaggac 41157444  T
Q  282 ccataaacacatagcctt 299  Q
    |||||||| ||| |||||    
T  41157445 ccataaacccattgcctt 41157462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 3537333 - 3537228
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  3537333 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 3537236  T
Q  282 ccataaac 289  Q
    ||||||||    
T  3537235 ccataaac 3537228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 34364496 - 34364596
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctta 300  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||| || ||||| ||||||||||    
T  34364496 gtgttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccgtaaacccatagcctta 34364595  T
Q  301 a 301  Q
    |    
T  34364596 a 34364596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 41184593 - 41184494
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||| ||||||||||||||| ||| |||||||    
T  41184593 tgttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaa 41184494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 183 - 289
Target Start/End: Original strand, 11977251 - 11977357
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||| |||||| |||||||| ||||||||| |||| ||     
T  11977251 actcacacttgagggggagtgttgctgtgtacaagtgtgagttatatgtcccacatcgggtaaaacagtaaatgttgaacaccttataagtaagagcact 11977350  T
Q  283 cataaac 289  Q
    |||||||    
T  11977351 cataaac 11977357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 22077990 - 22077900
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcct 298  Q
    |||||||||||||||||||||||| | |||||||||| || | ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  22077990 tgtgtgcaagtgtgagttatatgttttaaatcggatagaaaaataaaggttgaacatcttataagtaagaggacccataaactcatagcct 22077900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 17294573 - 17294666
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||| ||||||||||||||| ||| |||||||    
T  17294573 tgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaa 17294666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 44290983 - 44290894
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  44290983 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 44290894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 210 - 301
Target Start/End: Original strand, 41142370 - 41142461
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| | ||||||||||||| ||| |||||||    
T  41142370 tgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaacccattgccttaa 41142461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 41156981 - 41157068
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||| ||||||||| || | ||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  41156981 tgttgttgtgtgcaagtgtgaattatatgtcccataacggataaaagagtaaaggttgaacaccttataagtaagaggacccataaac 41157068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 50052178 - 50052104
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  50052178 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaac 50052104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 21378209 - 21378117
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacata 294  Q
    ||||| ||||||||||||| ||||||||||| || |||||||| || ||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  21378209 tgttgttgtgtgcaagtgtcagttatatgtcccagatcggatagaacagtaaaggttgaatatcttataagtaagaggacccataaacccata 21378117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 45084378 - 45084457
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataa 287  Q
    |||||||||||||||||||||| || || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  45084378 tgtgtgcaagtgtgagttatatctcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataa 45084457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 66634 - 66541
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||||  || |||||||| || ||||||||||||||| ||||||||| |||||| ||||||||| || |||||||    
T  66634 tgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaagaggatccataaacatatggccttaa 66541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 5320123 - 5320034
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||  || |||||||| || |||||| |||||||| ||||||||| ||||||||||||||| |||||||||||    
T  5320123 tgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaa 5320034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 3550721 - 3550809
Alignment:
Q  213 gcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| ||||||| ||||||| ||| |||||||    
T  3550721 gcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaa 3550809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 48588674 - 48588557
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || |||||||||||||| ||||||  | ||||||||||| ||||||||||||||| ||||||||| ||| |||    
T  48588674 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttctatgtccgacatcggataaaatagtaaaggttgaacaccttataagtaagaagac 48588577  T
Q  282 ccataaacacatagccttaa 301  Q
    || ||||  ||| |||||||    
T  48588576 ccgtaaattcattgccttaa 48588557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 5528902 - 5528835
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||    
T  5528902 agttatatgtctcacatcggataaaagagtaaaggttgaacatcttataaataagaggactcataaac 5528835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 26662066 - 26661979
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||| |||||||||||||||| || || ||| ||||||||||||||||||||||| ||||||||| ||| |||||||||||    
T  26662066 tgttgttgtgtacaagtgtgagttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaac 26661979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 29798189 - 29798288
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||| |||||||||||||||||||||  | || |||||||| ||||||||||||||| ||||||||| ||||||| ||||||| ||| |||||||    
T  29798189 tgttgttgtatgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaa 29798288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 31767329 - 31767246
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||| |||||||||||||| |||||||||  || ||||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  31767329 tgttgttgtgtgcaagtgtgggttatatgttccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccat 31767246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 37850768 - 37850681
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||||||||| || |||| |||||| |||| |||||||||| ||||||||| |||| ||||||||||    
T  37850768 tgttgttgtgtgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaacccataaac 37850681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 3875493 - 3875400
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||| || ||||||||||| || ||||||||||| ||||||||||| ||| ||||||||| ||||||| ||||||| ||| |||||||    
T  3875493 tgtgtgcaagagtcagttatatgtcacacatcggataaaaaagtaaaggttgtacaccttataagtaagaggactcataaacccattgccttaa 3875400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 24600476 - 24600395
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || |||||||| || |||||||||||||||| |||||||| |||| || |||||||    
T  24600476 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaactcataaac 24600395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 30630823 - 30630707
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||| |||||||||    ||||||||||||| |||||||||||| ||||||||||| | ||||||||  |||  |||||||| |||| ||    
T  30630823 gactcacacttgagagggagtgtta---tgtgcaagtgtgatttatatgtctcacatcggataaaaaattaaaggtttgacactttataagtaagagaac 30630727  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||||||| |||||||    
T  30630726 ccataaacacattgccttaa 30630707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 32594874 - 32594797
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||  | ||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  32594874 tgcaagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 32594797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 66274 - 66168
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttat-atgtctcaaatcggataaaagagtaaaggtt-gaacatcttataagttagagg 279  Q
    ||||||| ||||||||| |||||||   ||||||||||||||| || |||||||| |||||||| || |||||||||| ||||| ||||||||| |||||    
T  66274 gactcacacttgaggggaagtgttg---tgtgcaagtgtgagtaatcatgtctcacatcggatagaaaagtaaaggtttgaacaccttataagtaagagg 66178  T
Q  280 acccataaac 289  Q
    ||||||||||    
T  66177 acccataaac 66168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 34649440 - 34649499
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagt 273  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||    
T  34649440 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagt 34649499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 38804511 - 38804424
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||| ||| || |||| ||||||||||||||||||||||  |||||||| |||||| |||||||| |||| ||||||    
T  38804511 caagtgtgagttatacgtcccacatcgaataaaagagtaaaggttgaacacattataagtaagaggatccataaacccataaccttaa 38804424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 302
Target Start/End: Original strand, 44685452 - 44685547
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaagg-ttgaacatcttataagttagaggacccataaacacatagccttaat 302  Q
    ||||||||||||||||||||||||| || |||||||| || |||||||| ||||| | ||||||||| |||||||| |||||| ||| ||||||||    
T  44685452 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaat 44685547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 40082398 - 40082475
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    |||| |||| ||||||||||||||||||||  | ||||||||||| ||||||||||||||| ||||||||| ||||||    
T  40082398 gttgttgtgcgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagga 40082475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 41759483 - 41759572
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| |||||| |||||||| ||||||||| ||| || |||||||  ||| |||||||    
T  41759483 tgcaagtgtgagttatatgtcacacatcggataaaatagtaaaagttgaacaccttataagtaagatgatccataaatccattgccttaa 41759572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 39066369 - 39066282
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    |||||| |||||||||||||||||||||| |  || |||||||| || ||||||||||||||| ||||||| | ||| ||||||||||    
T  39066369 gtgttgttgtgtgcaagtgtgagttatatattccacatcggatagaaaagtaaaggttgaacaccttataactaagatgacccataaa 39066282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 35154207 - 35154150
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttg 259  Q
    ||||| ||||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  35154207 tgttgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttg 35154150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 3537752 - 3537680
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||| ||||||||||| || ||||||||||| ||||||||||||||| ||||| ||| |||||||| ||||||    
T  3537752 gtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttatgagtaagaggacctataaac 3537680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 5575110 - 5575193
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||| ||  ||||||| |||||||||||||||||| ||||||||| |||||||| |||||  |||||| ||||    
T  5575110 tgtgaattatatgtcccacgtcggatagaagagtaaaggttgaacaccttataagtaagaggacctataaatccatagctttaa 5575193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 1187526 - 1187445
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||| |||||||||||| |||| ||| || |||  ||||| ||||| |||||||| ||| |||||||||||    
T  1187526 tgtgtgcaagtgtgaattatatgtctcacatcgaatataaaagtggaggttaaacattttataagtgagaagacccataaac 1187445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 24132143 - 24132054
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||||||||| |  |||||||| || ||||||||||||||| ||||||| | || ||| |||||||| ||| |||||||    
T  24132143 tgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaacaccttataaataaggggatccataaactcattgccttaa 24132054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 26661797 - 26661748
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  26661797 acaagcaacaagtggctccttgtgcagcaacgacgatacatgcaaagtaa 26661748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 14318875 - 14318943
Alignment:
Q  220 tgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||  ||  |||||||||| ||||||||||||||| ||||||||| ||| ||||||||||    
T  14318875 tgagttatatgttccacgtcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaa 14318943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 4878799 - 4878869
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||||||| ||||||||||||||  || ||||||||||| ||| ||| |||||||| |||||||| ||||    
T  4878799 tgtgtgcaattgtgagttatatgttccacatcggataaaatagtgaagcttgaacattttataagtgagag 4878869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 4956218 - 4956268
Alignment:
Q  239 cggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| || ||||||||||||||||||||||||| |||||| ||||||||    
T  4956218 cggatagaaaagtaaaggttgaacatcttataagtaagaggatccataaac 4956268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 9955911 - 9955981
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaaga-gtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||||||||| || ||| ||||||| | ||||||||||||||  |||||||| |||||||||||    
T  9955911 agtgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagaggacccat 9955981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 289
Target Start/End: Complemental strand, 22077245 - 22077191
Alignment:
Q  235 aaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||| || ||||||||||||| | ||||||||| |||||||||||||||    
T  22077245 aaatcggatagaaaagtaaaggttgaataccttataagtaagaggacccataaac 22077191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 1188750 - 1188669
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||  || |||||||| || |||  |||||||| || |||||||| ||| ||| |||||||    
T  1188750 tgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgagaagactcataaac 1188669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 22793274 - 22793355
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||| |||||||||||||||||||| || |||| ||| || |||| |||||||| |  |||||||| |||||| ||||||||    
T  22793274 tgtgagcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagaggatccataaac 22793355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 50469256 - 50469188
Alignment:
Q  192 tgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||||   |||||||||||||||||||||||  | ||| ||||| | |||||||||||||||    
T  50469256 tgagggggagtgttg---tgtgcaagtgtgagttatatgtcctacatcagataataaagtaaaggttgaaca 50469188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 22077299 - 22077248
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    |||||||||||||||||   ||||||||||||||||||||||| || ||||||||    
T  22077299 cttgagggggagtgttg---tgtgcaagtgtgagttatatgtcccacatcggata 22077248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 45494137 - 45494085
Alignment:
Q  212 tgcaagtgtgagtt-atatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||| ||||||| || ||||||||||| |||||||||||||||    
T  45494137 tgcaagtgtgagtttatatgtcccacatcggataaaatagtaaaggttgaaca 45494085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 37555733 - 37555800
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    |||||||||||||| ||| || ||||||||||| ||| ||||||||| |  |||||||| ||||||||    
T  37555733 aagtgtgagttataagtcccacatcggataaaatagtgaaggttgaatacattataagtaagaggacc 37555800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 50051837 - 50051777
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||| || ||||||||    
T  50051837 gactcacacttgagggggaatgttg--gtttgcaagtgtgagttatatgtcccacatcggata 50051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 19283617 - 19283524
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||||| || | |||||| || |||  ||||||| ||  || ||| | ||||||| ||||||| ||| |||||||    
T  19283617 tgtgtgcaagtgtgagttatatgtcccacaccggatagaaaagtggaggttgagcactttgtaaatgagaggacacataaactcatcgccttaa 19283524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 17644 - 17525
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||| ||||| |||||||    
T  17644 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggac 17545  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| |||||||||||    
T  17544 ccataaacccatagccttaa 17525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 9309325 - 9309444
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| |||||||    
T  9309325 gactcacaattgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagaggac 9309424  T
Q  282 ccataaacacatagccttaa 301  Q
    || ||||| ||| |||||||    
T  9309425 ccttaaactcattgccttaa 9309444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 30359579 - 30359698
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||| |||||||    
T  30359579 gactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagaggac 30359678  T
Q  282 ccataaacacatagccttaa 301  Q
     ||||||| |||| ||||||    
T  30359679 tcataaacccataaccttaa 30359698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 190 - 301
Target Start/End: Original strand, 34835187 - 34835298
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||| |||| |||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  34835187 cttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 34835286  T
Q  290 acatagccttaa 301  Q
     ||| |||||||    
T  34835287 tcattgccttaa 34835298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 30359261 - 30359360
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||  ||||||||||||||| |||||||||||    
T  30359261 tgttgttgtgtacaagtgtgagttatatgtctcacatcggataaaagagtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaa 30359360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 8918952 - 8918845
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| || ||| ||||  |||||||||||||||||  |||||||| |||||||    
T  8918952 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggac 8918853  T
Q  282 ccataaac 289  Q
    ||||||||    
T  8918852 ccataaac 8918845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 45122219 - 45122138
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  45122219 tgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaacccataaac 45122138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 8794100 - 8794188
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||||| |||||||    
T  8794100 gtgttgttgtgtacaagtgtgagttatatgtctcacatcggataaaagaataaatgttgaacatcttataagtaagaggactcataaac 8794188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 34835444 - 34835564
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaat-cggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||  | | ||||||| |||||||||| |||| ||||||||| ||||||    
T  34835444 gactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagagga 34835543  T
Q  281 cccataaacacatagccttaa 301  Q
    ||||||||| ||| |||||||    
T  34835544 cccataaactcattgccttaa 34835564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 34835710 - 34835830
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaat-cggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||  | | ||||||| |||||||||| |||| ||||||||| ||||||    
T  34835710 gactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagagga 34835809  T
Q  281 cccataaacacatagccttaa 301  Q
    ||||||||| ||| |||||||    
T  34835810 cccataaactcattgccttaa 34835830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 190 - 289
Target Start/End: Original strand, 45122984 - 45123081
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| |||| ||  ||||| ||| |||||||||||    
T  45122984 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacacct--taagtaagatgacccataaac 45123081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 284
Target Start/End: Complemental strand, 18372442 - 18372342
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||   ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| ||| |||    
T  18372442 gactcacacttgagggggagtgttgttgtga--aagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaagac 18372345  T
Q  282 cca 284  Q
    |||    
T  18372344 cca 18372342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 298
Target Start/End: Complemental strand, 9482782 - 9482676
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||| ||||| ||||||  ||||||||||  || || |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9482782 cttgagggggagtgttgttgtgtacaagtg--agttatatgttccacatgggataaaagagtaaaggttgaacaccttataagtaagaggacccataaac 9482685  T
Q  290 acatagcct 298  Q
     ||| ||||    
T  9482684 ccattgcct 9482676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 3670032 - 3670137
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||| || ||||||||||| |||||||||| |||| |||||||||  ||||||    
T  3670032 gactcacacttgagggggactgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtttaacaccttataagtatgaggac 3670129  T
Q  282 ccataaac 289  Q
    ||||||||    
T  3670130 ccataaac 3670137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 147441 - 147528
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| || ||| |||||||||||||||||| || ||||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  147441 tgttgttgcgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaac 147528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 1014057 - 1013941
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||  || ||||||||||| |||||| |||||||| | ||||||| |||||||    
T  1014057 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgttccacatcggataaaatagtaaaagttgaacaccctataagtaagaggac 1013960  T
Q  282 ccataaacacatagcctta 300  Q
    | |||||| ||| ||||||    
T  1013959 caataaacccattgcctta 1013941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 3038458 - 3038359
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| | ||||||||||||| ||| |||||||    
T  3038458 tgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaacccattgccttaa 3038359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 25561972 - 25561897
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  25561972 caagtgtgagttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaac 25561897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 33113535 - 33113436
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| ||||| |||||||||||||  | ||||||||||| |||||||||||||| |||||||||| ||||||||||||||| ||| |||||||    
T  33113535 tgttgttgtgtacaagtttgagttatatgtcctacatcggataaaatagtaaaggttgaacgtcttataagtaagaggacccataaactcattgccttaa 33113436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 45121843 - 45121737
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||||||||||| ||||| |||||||||||| | |||| || |||||||||||||||||||||||| || ||||||||| ||||||     
T  45121843 gactcacacttaagggggagtgttgttgtgtacaagtgtgagttgt-tgtcccacatcggataaaagagtaaaggttgatcaccttataagtaagaggat 45121745  T
Q  282 ccataaac 289  Q
    ||||||||    
T  45121744 ccataaac 45121737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 70425 - 70355
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||| || |||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  70425 gtgagttatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagaggacccataaac 70355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 147799 - 147880
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||||| |||||| ||||||||    
T  147799 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatctgataaaaaagtaaatgttgaaca 147880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 1514077 - 1513984
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| |||||||||| || || ||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| |||| ||||||    
T  1514077 tgtgtacaagtatgagttatatatcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccttaaacccataaccttaa 1513984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 3669687 - 3669776
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| ||||||| ||||||| ||| |||||||    
T  3669687 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaa 3669776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 9608741 - 9608822
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||| ||| |||||||||||    
T  9608741 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccataaac 9608822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 41972154 - 41972235
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||| | |||||||||||||    
T  41972154 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgataggacccataaac 41972235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 43274947 - 43274860
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||  ||||||||||||||||| ||| ||| ||||||||||||||||||||| || |||||||| |||||||||||||||    
T  43274947 tgttgttgtgtataagtgtgagttatatgtttcacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaac 43274860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 210 - 301
Target Start/End: Complemental strand, 45122070 - 45121979
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||| || |||| |||||| |||||||||||||||  |||||||| ||||||| ||||||| ||| |||||||    
T  45122070 tgtgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaactcattgccttaa 45121979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 284
Target Start/End: Complemental strand, 18372859 - 18372785
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccca 284  Q
    |||| |||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  18372859 tgtgaaagtgtgagttatatgtcacacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccca 18372785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 5420651 - 5420740
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||  ||||||||| || |||||||| || ||||||||||||||||||||||||| ||||||| ||||||| ||| |||||||    
T  5420651 tgcaagtgtgtattatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaacccattgccttaa 5420740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 9308973 - 9309065
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtct--caaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcct 298  Q
    |||||||||||||||||||||||||   || ||| |||||||||||||| ||||||||| |||||||| ||||||||||||||| ||| ||||    
T  9308973 tgtgtgcaagtgtgagttatatgtcctacacatcagataaaagagtaaaagttgaacatgttataagtaagaggacccataaacccattgcct 9309065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 40518555 - 40518659
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||| |||   ||| ||||||||||||||||||| || ||| |||| || ||||||||||||||| ||||||| | |||||||    
T  40518555 gactcacacttgagggggagtattg---tgttcaagtgtgagttatatgtcccacatcagatagaaaagtaaaggttgaacaccttataaataagaggac 40518651  T
Q  282 ccataaac 289  Q
    ||||||||    
T  40518652 ccataaac 40518659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 9483324 - 9483268
Alignment:
Q  233 tcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  9483324 tcaaatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaac 9483268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 34834865 - 34834965
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctta 300  Q
    |||||| ||||| ||||||||||||||||||| || || |||||||| |||||||||| |||| ||||||||| ||| ||| ||||||| ||| ||||||    
T  34834865 gtgttgttgtgtacaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagatgactcataaactcattgcctta 34834964  T
Q  301 a 301  Q
    |    
T  34834965 a 34834965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 40579662 - 40579587
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||| |||||||| ||| || |||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  40579662 caagtgtgaattatatgtttcatattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 40579587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 6877032 - 6876946
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatat-gtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    |||||| |||||||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||||||| | ||| ||||||||    
T  6877032 gtgttgttgtgtgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaacaccttataaataagatgacccata 6876946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 41416322 - 41416252
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||| ||||||||    
T  41416322 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaac 41416252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 1014403 - 1014326
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||  | ||| ||||||| ||||||||||||||| ||||||||| ||||||||| |||||    
T  1014403 tgcaagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccgtaaac 1014326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 20870733 - 20870654
Alignment:
Q  212 tgcaagtgtgagttatatgtct--caaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||| | |  || ||| ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  20870733 tgcaagtgtgagttatatatgttccacatcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaac 20870654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 18373118 - 18373012
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||  ||||||||| ||||| || |||||| ||||||||| ||  |||||||||| ||||||||||||||| ||||||| | |||||||    
T  18373118 gactcacacttgagatggagtgttgttgtgtaca-gtgtgatttatatgtcccacttcggataaaatagtaaaggttgaacaccttataaataagaggac 18373020  T
Q  282 ccataaac 289  Q
     |||||||    
T  18373019 tcataaac 18373012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 25561792 - 25561729
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  25561792 agttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagtacccat 25561729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 37544646 - 37544572
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||||| ||| || ||||||||||| |||||||||||||||  |||||||  ||||||||||||||    
T  37544646 caagtgtgagttataagtcgcacatcggataaaatagtaaaggttgaacacattataagaaagaggacccataaa 37544572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 9620838 - 9620745
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||||||||||||||| | | |||| || |||| | ||||| ||  |||||||| ||||||||||||||| ||| |||||||    
T  9620838 tgtgtgcaagtgtgagttatatgtctcacaacagatagaaaagtagaagttgatcactttataagtgagaggacccataaactcattgccttaa 9620745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 32640682 - 32640633
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacat 264  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  32640682 aagtgtgagttatctgtctcacatcggataaaagagtaaaggttgaacat 32640633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 6731876 - 6731953
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaa 261  Q
    |||||||  |||||||||||||||| | ||  ||||||||||||||||||| || ||||||||||| |||||||||||||    
T  6731876 gactcacatttgagggggagtgttgttttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 6731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 30441081 - 30441174
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatc----ttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| || ||||| ||||| ||||||||||||||| |    |||||||| ||||| ||||||||| ||| |||||||    
T  30441081 tgcaagtgtgagttatatgtcccacatcggctaaaatagtaaaggttgaacaccttaattataagtaagagggcccataaacccattgccttaa 30441174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 45122649 - 45122701
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  45122649 atcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 45122701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 18371842 - 18371762
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacat 264  Q
    ||||||| |||||||||||||| || |||||  |||||  ||||||||||| || ||||||||||| ||||||||||||||||    
T  18371842 gactcacacttgagggggagtgctgttgtgtagaagtg--agttatatgtcacacatcggataaaatagtaaaggttgaacat 18371762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 18372557 - 18372485
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaagg 256  Q
    ||||||| ||||||||||||||||| ||||   |||||||||||||||||| || ||||||||||| ||||||||    
T  18372557 gactcacacttgagggggagtgttgttgtga--aagtgtgagttatatgtcccacatcggataaaatagtaaagg 18372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 20130454 - 20130536
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctta 300  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||| ||| ||||| ||| || |||||||| |||| |||||    
T  20130454 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaacacctt-taagtaagatgatccataaacccataacctta 20130536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 3669945 - 3669994
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  3669945 acaagcaacaagtggctccttgtgcaggaacggcgatacatgcaaagtaa 3669994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 4154828 - 4154747
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || ||| |||| || |||  ||||||||||  |||||||| | |||||||||||||    
T  4154828 tgtgtgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataagtgaaaggacccataaac 4154747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 9609122 - 9609175
Alignment:
Q  249 agtaaaggttgaacatcttataagttagaggacccataaacacatagccttaat 302  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||| ||||||||    
T  9609122 agtaaaggttgaacatcttataagtaagatgacccataaacccatcgccttaat 9609175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 43398225 - 43398161
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    |||||||||||||| ||||| |||||||| || ||||||||||||||| ||||||| | ||||||    
T  43398225 agtgtgagttatatatctcatatcggatagaaaagtaaaggttgaacaccttataaataagagga 43398161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 18372758 - 18372684
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||| ||||||||  ||  |||||||||| ||||||||||||||| ||||||||| ||||||| |||||||    
T  18372758 caagtgtgatttatatgttccatttcggataaaatagtaaaggttgaaca-cttataagtaagaggactcataaac 18372684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 20995563 - 20995508
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||  ||||||||||    
T  20995563 tgtgtgcaagtgtgagttatatgtctcacatcagataaaaaagtggaggttgaaca 20995508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 6651510 - 6651552
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaa 261  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  6651510 gtgagttatatgtctcacatcggataaaatagtaaaggttgaa 6651552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 303
Target Start/End: Complemental strand, 4154467 - 4154348
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||   ||| ||||||||| |||||||||||||||  | ||| |||| || |||  ||||||||||  |||||||| ||| |||    
T  4154467 gactcacacttgagggggaaa-ttgttgtgtgcaaatgtgagttatatgtcctacatcagatagaaaagtggaggttgaacactttataagtgaga-gac 4154370  T
Q  282 ccataaacacatagccttaata 303  Q
    |||||||| ||| |||||||||    
T  4154369 ccataaactcattgccttaata 4154348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 18380171 - 18380114
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagt 273  Q
    |||||||||||||| || || |||| |||||| ||||||||||||||| |||||||||    
T  18380171 agtgtgagttatatatcccacatcgaataaaatagtaaaggttgaacaccttataagt 18380114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 18645749 - 18645713
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    |||||||||||||||||||||||||||| ||||||||    
T  18645749 tgtgtgcaagtgtgagttatatgtctcacatcggata 18645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 40518065 - 40518148
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaaga--gtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||  || || |||||||| |  |||||||||||||| ||||||||| |  ||||||||||||    
T  40518065 tgtgttcaagtgtgagttatatgttccacattggataaaaaaaagtaaaggttgaacaccttataagtaaatggacccataaac 40518148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 18372122 - 18372075
Alignment:
Q  242 ataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| ||||||||||||||| ||||||||| |||||| ||||||||    
T  18372122 ataaaatagtaaaggttgaacaccttataagtaagaggatccataaac 18372075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 289
Target Start/End: Original strand, 32305503 - 32305554
Alignment:
Q  238 tcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||| ||||||||||||||| ||||||||| ||| |||| ||||||    
T  32305503 tcggataaaatagtaaaggttgaacaccttataagtaagaagacctataaac 32305554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 1014144 - 1014095
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||| ||||||||| ||||||||| |||| | |||||||||||||||    
T  1014144 acaagcagcaagtggctccttgtgcaggaacgacgatacatgcaaagtaa 1014095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 12283869 - 12283934
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagt 273  Q
    ||||||||||||| ||||||||||| ||  || ||||||| |||||| |||||| |||||| ||||    
T  12283869 tgtgtgcaagtgtaagttatatgtcccacgtcagataaaaaagtaaatgttgaatatcttaaaagt 12283934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 43274755 - 43274702
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctca 235  Q
    ||||||| ||||||||  ||||||| ||||| |||||||||||||||| |||||    
T  43274755 gactcacacttgagggacagtgttgttgtgtacaagtgtgagttatatatctca 43274702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 4e-35; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 2578630 - 2578512
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || | |||||||||||||||||||||||||  |||||||| |||||||    
T  2578630 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacactttataagtaagaggac 2578532  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| |||||||||||    
T  2578531 ccataaacccatagccttaa 2578512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 16108033 - 16108152
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||  || ||| |||||||||||||| |||||||| ||||||||| |||||||    
T  16108033 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcagataaaagagtaaatgttgaacaccttataagtaagaggac 16108132  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  16108133 ccataaacccattgccttaa 16108152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 29518892 - 29518997
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  29518892 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 29518989  T
Q  282 ccataaac 289  Q
    ||||||||    
T  29518990 ccataaac 29518997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 2580040 - 2579941
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||| ||||||||||||||| || ||||||||    
T  2580040 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaacccacagccttaa 2579941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 3409632 - 3409747
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||  || ||| ||||||| |||||| |||||||||||||||||| |||||||    
T  3409632 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtaccacatcagataaaatagtaaaagttgaacatcttataagtaagaggac 3409729  T
Q  282 ccataaacacatagcctt 299  Q
    |||||||| ||| |||||    
T  3409730 ccataaacccattgcctt 3409747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 35210204 - 35210293
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||  ||| |||||||    
T  35210204 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaaccattgccttaa 35210293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 593877 - 593790
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||| ||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  593877 tgttgctgagtgcaagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaac 593790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 301
Target Start/End: Original strand, 2377756 - 2377843
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  2377756 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 2377843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 195 - 289
Target Start/End: Original strand, 2378111 - 2378203
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  2378111 gggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 2378203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 2579293 - 2579203
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataag 272  Q
    ||||||| ||||||||||||||||| ||||| ||||||| ||||||||||| || |||||||||||||||||| |||||||| ||||||||    
T  2579293 gactcacacttgagggggagtgttgttgtgtacaagtgttagttatatgtcccacatcggataaaagagtaaaagttgaacaccttataag 2579203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 191 - 289
Target Start/End: Original strand, 16454886 - 16454984
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||| ||||| ||| |||||||||| |||| || ||| ||||||||||||||||||||||| ||||||||| | |||||||||||||    
T  16454886 ttgagggggagtgttgttgtgtacaaatgtgagttatgtgtcccacatcagataaaagagtaaaggttgaacaccttataagtaataggacccataaac 16454984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 3409259 - 3409348
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  3409259 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaa 3409348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 10074548 - 10074432
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| |||||||||||||   ||||||||||||||||| | ||| || |||||||| || ||||||||||||||| ||||||||| |||||||    
T  10074548 gactcacacttaagggggagtgttg---tgtgcaagtgtgagttagaggtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggac 10074452  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  10074451 ccataaactcattgccttaa 10074432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 29518503 - 29518580
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  29518503 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 29518580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 32741179 - 32741256
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  32741179 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 32741256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 16107668 - 16107767
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| |||||||||||||||||| ||| ||||||||||| |||||||||| |||| ||||||||| ||||||| ||||||| ||| |||||||    
T  16107668 tgttgttgtgtacaagtgtgagttatatgtgtcacatcggataaaaaagtaaaggttaaacaccttataagtaagaggactcataaacccattgccttaa 16107767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 10074168 - 10074060
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||   |||||||| ||||||||||| || || |||||||| || |||||| |||||||| ||||||||| |||||||||||||||    
T  10074168 cttgagggggagtgttg---tgtgcaagggtgagttatatatcccacatcggatagaaaagtaaacgttgaacaccttataagtaagaggacccataaac 10074072  T
Q  290 acatagccttaa 301  Q
     ||| |||||||    
T  10074071 ccattgccttaa 10074060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 14748496 - 14748419
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| | |||||||||||||||    
T  14748496 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaac 14748419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 26544049 - 26544126
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| |||||||||||||||    
T  26544049 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaac 26544126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 9062501 - 9062430
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||| |||||||    
T  9062501 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggactcataaac 9062430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 16454565 - 16454664
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| |||||||||||||| |||| || ||| ||||||||| |||| |||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  16454565 tgttgttgtgtacaagtgtgagttatgtgtcccacatcagataaaagaataaaagttgaacaccttataagtaagaggacccataaacccattgccttaa 16454664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 5832182 - 5832108
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||| ||||||||||| || || |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  5832182 caagtgtaagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 5832108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 1846748 - 1846837
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||| || ||||||||| ||||||||||| ||||||||||||||| ||||||||| |||| |||||||||  ||| |||||||    
T  1846748 tgcaagtgtgaattctatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagcacccataaatccattgccttaa 1846837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 1950340 - 1950267
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| |||| |||| |||||| |||||||    
T  1950340 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaagaggagccataaa 1950267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 3058226 - 3058315
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||| ||||||||||| || ||||||||||| ||||||||||||||| |||||||||  ||||| |||||||| ||| |||||||    
T  3058226 tgcaagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtatgaggatccataaacccattgccttaa 3058315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 301
Target Start/End: Complemental strand, 32460733 - 32460649
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||| || |||| |||||| ||||||||||||||| ||||||||| ||||||| ||||||| ||| |||||||    
T  32460733 gtgtgagttatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaa 32460649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 301
Target Start/End: Original strand, 3415462 - 3415547
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||| || |||  |||||| ||||||||||||||| | ||||||| ||||||||||||||| ||| |||||||    
T  3415462 agtgtgagttatatgtcccacatcacataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgccttaa 3415547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 10073776 - 10073697
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||| ||||||||||| || |||||| |||||  ||||||||||||| ||||||||| |||||| ||||||||    
T  10073776 tgtgtgcaagtgttagttatatgtcccacatcggagaaaag--taaaggttgaacaccttataagtaagaggatccataaac 10073697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 10911565 - 10911655
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaaga-gtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||||||||  | ||| ||||||| | |||||||||||||| ||||||||| ||||||| ||||||| ||| |||||||    
T  10911565 tgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaa 10911655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 1127360 - 1127437
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||||||||| || || ||||| ||||| ||||||||||||||| ||||||||| ||||||| |||||||    
T  1127360 tgcaactgtgagttatatatcccacatcgggtaaaatagtaaaggttgaacaccttataagtaagaggactcataaac 1127437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 2843560 - 2843644
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga-cccataaacacatagccttaa 301  Q
    |||||||||||||| ||| ||||||||||| | |||| |||||||| ||||||||| |||||| ||||||||| ||| |||||||    
T  2843560 tgtgagttatatgtttcacatcggataaaataataaaagttgaacaccttataagtaagaggaccccataaactcattgccttaa 2843644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 5958764 - 5958684
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||| |||||||||||||| | | ||||||||||| ||||||||||||||| ||||||| | |||| || |||||||    
T  5958764 gtgtgcaattgtgagttatatgtgttacatcggataaaacagtaaaggttgaacaccttataaataagagaactcataaac 5958684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 6999951 - 6999877
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||  | ||||||||||| |||||| |||||||| |||||| || |||||| ||||||||    
T  6999951 aagtgtgagttatatgtcctacatcggataaaaaagtaaaagttgaacaccttatatgtaagaggatccataaac 6999877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 2579677 - 2579561
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||| |||||||| |    ||| |||||||||||||||| || |||||| |||| ||||||||| | | | ||||||||| ||||| |    
T  2579677 gactcacacttgagggagagtgttgtta---gcaggtgtgagttatatgtcccacatcggacaaaaaagtaaaggtcggataccttataagtaagagggc 2579581  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  2579580 ccataaactcattgccttaa 2579561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 8481898 - 8482015
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||  ||| ||||||||||||||||||||||||| || ||| |||| || |||  ||||||||||  |||||| | ||| |||    
T  8481898 gactcacacttgagggggaga-ttgttgtgtgcaagtgtgagttatatgtc-cacatcagatataaaagtggaggttgaacactttataaatgagatgac 8481995  T
Q  282 ccataaacacatagccttaa 301  Q
     ||||||| ||| |||||||    
T  8481996 tcataaactcattgccttaa 8482015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 2579016 - 2578916
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccca 284  Q
    |||| |||||||||||||||||   || |||||||||| ||||||||| |  ||||||||||| |||||| |||||| | ||||||| | |||||| |||    
T  2579016 tcacacttgagggggagtgttg---tgagcaagtgtgatttatatgtccctcatcggataaaa-agtaaatgttgaataccttataaataagaggatcca 2578921  T
Q  285 taaac 289  Q
    |||||    
T  2578920 taaac 2578916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 6071128 - 6071221
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||||| || || | ||| || |||  ||||||||||  |||||||| ||| || |||||||| ||| |||||||    
T  6071128 tgtgtgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacactttataagtgagatgatccataaactcattgccttaa 6071221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 14789325 - 14789285
Alignment:
Q  249 agtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||| |||| |||| |||||||||||||||    
T  14789325 agtaaaggttgaacaccttacaagtaagaggacccataaac 14789285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 35210503 - 35210551
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||| ||||||||||||| | ||| ||||| |||||||||||    
T  35210503 atcggataaaatagtaaaggttgaataccttgtaagtaagaggacccat 35210551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 26074582 - 26074701
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||| |||||||    
T  26074582 gactcacacttgagggggagtgtttttgtgtacaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtaagaggac 26074681  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  26074682 ccataaacccattgccttaa 26074701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 26074970 - 26074863
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||   |||||||  ||||||    
T  26074970 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacaatataagtaggaggac 26074871  T
Q  282 ccataaac 289  Q
    ||||||||    
T  26074870 ccataaac 26074863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 26075330 - 26075231
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  26075330 tgttgttgtgtacaagtgtgatttatatgtctcacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 26075231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 299479 - 299578
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| |||| |||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||| |||||||||||    
T  299479 tgttgttgtgcgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaactcatagccttaa 299578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 6224186 - 6224285
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  6224186 tgttgttgtgtacaagtgtgagttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcatcgccttaa 6224285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 13415947 - 13415841
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||| |||| || ||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| ||||||||| |||||||    
T  13415947 gactcacacttgagggg-agtgctgttgtgtgcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagaggac 13415849  T
Q  282 ccataaac 289  Q
    ||||||||    
T  13415848 ccataaac 13415841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 15370089 - 15370188
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||||| ||||||||||||||  || ||||||||    
T  15370089 tgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaatccacagccttaa 15370188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 36492385 - 36492294
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacat 293  Q
    ||||| ||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  36492385 tgttgttgtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccaataaacacat 36492294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 202 - 299
Target Start/End: Complemental strand, 40296483 - 40296386
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctt 299  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| || |||||||||||| ||||||||| ||||||||||||||| ||| |||||    
T  40296483 tgttggtgtgtgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaacccattgcctt 40296386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 3295204 - 3295086
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtg--caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagg 279  Q
    ||||||| ||||||||||||||||| ||||||  ||||||||||| ||||||| || ||||||||||| ||||||||||||||| ||||||||| ||| |    
T  3295204 gactcacacttgagggggagtgttgttgtgtgtgcaagtgtgagt-atatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaag 3295106  T
Q  280 acccataaacacatagcctt 299  Q
    |||||||||| ||| |||||    
T  3295105 acccataaacccattgcctt 3295086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 301
Target Start/End: Complemental strand, 26074330 - 26074215
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    |||||| |||||||||||||||||   ||||||||||||||||||||||| || ||||||||||| ||||||||||||||| || ||| || ||||||||    
T  26074330 actcacacttgagggggagtgttg---tgtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaacacctcatatgtaagaggacc 26074234  T
Q  283 cataaacacatagccttaa 301  Q
    ||| ||| ||| |||||||    
T  26074233 catgaacccattgccttaa 26074215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 41170640 - 41170723
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  41170640 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaa 41170723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 41632778 - 41632859
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||| |||||||||||||| |||||||| || ||||||||||||||| ||||||||| |||||||||||||||    
T  41632778 tgtgtgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaac 41632859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 6500795 - 6500911
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||| |||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| | | |||||    
T  6500795 gactcacacttgatggggagtgttg--gtttgcaagtgtgagttatatgtc-cacatcggataaaatagtaaaggttgaacaccttataaataaaaggac 6500891  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  6500892 ccataaactcattgccttaa 6500911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 18603276 - 18603189
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  18603276 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 18603189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 12662820 - 12662734
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||| |||  |||||||||    
T  12662820 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaa 12662734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 9498812 - 9498723
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| |||||||||||||||||| ||| |||| || ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  9498812 tgcaaatgtgagttatatgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 9498723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 32487394 - 32487482
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| | ||||||| ||||||||||||||| ||| |||||||    
T  32487394 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca-cctataagtaagaggacccataaacccattgccttaa 32487482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 35150003 - 35150082
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  35150003 tgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaaga-gacccataaa 35150082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 185 - 299
Target Start/End: Original strand, 624171 - 624283
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggaccca 284  Q
    |||| ||||||||| |||||||  || ||||||||||||||||||||| || || | |||||| |||||||||||||||  |||||||| ||| ||||||    
T  624171 tcacacttgaggggaagtgttg--gtttgcaagtgtgagttatatgtcccacattgtataaaatagtaaaggttgaacacgttataagtaagatgaccca 624268  T
Q  285 taaacacatagcctt 299  Q
    ||||| |||||||||    
T  624269 taaacccatagcctt 624283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 6500451 - 6500539
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||  ||||| ||| |||||||    
T  6500451 tgcaagtgtgagttatatgtc-cacatcggataaaatagtaaaggttgaacaccttataagtaagaggacctttaaacccattgccttaa 6500539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 27502194 - 27502117
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || || |||||||| |||||||||| |||| ||||||||| |||||||||||||||    
T  27502194 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagaggacccataaac 27502117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 36568729 - 36568636
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||||| || |||||||| || |||||| |||||||| ||||||||| ||| ||||| ||||| ||| |||||||    
T  36568729 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacccgtaaacccattgccttaa 36568636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 11417143 - 11417046
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||||||  ||||||||||  || ||||||||||| ||||||||||||||| ||||||||| |||||| |||||||| ||| |||||||    
T  11417143 tgttgttgtgtgcaagtg--agttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaa 11417046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 25327925 - 25328012
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||  ||||||||||||||||||  | ||||||||||| |||||| |||||||| ||||||||| |||||||||||||||    
T  25327925 tgttgttgtgtctaagtgtgagttatatgtcctacatcggataaaacagtaaaagttgaacaccttataagtaagaggacccataaac 25328012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 35914839 - 35914925
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||| |||||  |||| ||||||||||||| || |||||||||||||||||||||||||||| |||||||| ||| ||||| ||||    
T  35914839 tgttgttgtgtataagtatgagttatatgtcacacatcggataaaagagtaaaggttgaacattttataagtaagaagacccgtaaa 35914925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 1028679 - 1028598
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||| || |||||||| || |||||||| ||||||  |||||||| |||||||||||||||    
T  1028679 tgtgtacaagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaac 1028598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 3295505 - 3295425
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| |||||||||| ||||||  || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  3295505 tgtgtggaagtgtgagt-atatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 3295425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 31509594 - 31509710
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||| |||  ||| |||||||||||||||||||||||||||| |||||||| || |||  ||||||| ||  |||||||| |||||||    
T  31509594 gactcacacttgagggagaga-ttgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggac 31509692  T
Q  282 ccataaacacatagcctt 299  Q
     ||||||| ||| |||||    
T  31509693 tcataaactcattgcctt 31509710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 42405764 - 42405677
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||| |||||||||||||||||||  | ||||||||||| ||||||||||||||| |||| |||| | ||||| |||||||    
T  42405764 tgttgttgtgtacaagtgtgagttatatgtccaacatcggataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaac 42405677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 15370384 - 15370491
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| |||||||||||||||||             |||||| ||| |||||| |||||||| ||||||||| |||||||    
T  15370384 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagtg------------tcggatgaaacagtaaatgttgaacaccttataagtaagaggac 15370471  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| |||||||||||    
T  15370472 ccataaacccatagccttaa 15370491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 35168006 - 35167920
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||| ||||| ||||| |||||||| | ||||| ||| ||||||||||||||||||||||| |||||||||  || ||||||||||    
T  35168006 tgttgttgtgtacaagtatgagttatgtatctcacatcagataaaagagtaaaggttgaacaccttataagtaggatgacccataaa 35167920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 623818 - 623907
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||  ||| |||| ||  || ||||||||  ||||||||||    
T  623818 tgcaagtgtgagttatatgtctcacatcggatataatagtaaaggttgaacactttacaagtaagttgagccataaacttatagccttaa 623907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 212 - 293
Target Start/End: Complemental strand, 29549413 - 29549332
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacat 293  Q
    ||||||||||||||||||||  || ||| ||||||| |||||||| |||||| | ||||||| ||| |||||||||||||||    
T  29549413 tgcaagtgtgagttatatgttccatatcagataaaatagtaaaggatgaacaccatataagtaagaagacccataaacacat 29549332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 38427553 - 38427620
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    |||||||||||||||| || || ||||| || |||||||||||||||||||||||| ||||||||||||    
T  38427553 gtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacatcttataag-tagaggacccat 38427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 26074320 - 26074395
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||| || ||| |||| || | ||||| ||||||| ||||||||| |||||||||||||||    
T  26074320 caagtgtgagttatatgtcccacatcagatagaaaactaaagattgaacaccttataagtaagaggacccataaac 26074395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 24489389 - 24489275
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||   ||| ||||||||||||||||||| || ||| |||| || || ||||||| |||| ||||| ||| |||  ||    
T  24489389 gactcacacttgagggggagtgttg---tgttcaagtgtgagttatatgtcccacatcagatagaaaagaaaaggttaaacaccttattagtaaga--ac 24489295  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  24489294 ccataaacccattgccttaa 24489275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 7768852 - 7768925
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataa 287  Q
    |||||||||||||||| ||  | ||||||||||| | ||||||||||||| ||||||||| | |||||||||||    
T  7768852 caagtgtgagttatatatcctacatcggataaaataataaaggttgaacaccttataagtaaaaggacccataa 7768925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 35150736 - 35150789
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaa 254  Q
    |||||| ||||||||||||||||||||||||| || |||| |||||||||||||    
T  35150736 gtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 35151027 - 35151080
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaa 254  Q
    |||||| ||||||||||||||||||||||||| || |||| |||||||||||||    
T  35151027 gtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35151080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 13785794 - 13785732
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaa 247  Q
    |||||||  ||||||||||||||||   |||| |||||||||||||||||| ||||||||||||||    
T  13785794 gactcacatttgagggggagtgttg---tgtggaagtgtgagttatatgtcccaaatcggataaaa 13785732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 34753193 - 34753106
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||| ||| ||| ||||||||||| || || ||||| || |||||| |||||||| ||||||||| ||| |||||||||||    
T  34753193 tgttgttgtgtacaaatgtaagttatatgtcccacattggatagaaaagtaaaagttgaacaccttataagtaagaagacccataaac 34753106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 300955 - 301025
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagag 278  Q
    ||||| |||||||| |||||||||| || ||| ||||||| ||||||||||||| | ||||||||| ||||    
T  300955 tgtgtacaagtgtgggttatatgtcccacatcagataaaacagtaaaggttgaataccttataagtaagag 301025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 39309680 - 39309754
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    ||||| ||||| ||||||||||||| || |||||||||||| ||||| ||||||||  |||||| | ||||||||    
T  39309680 tgtgtacaagtatgagttatatgtcccacatcggataaaagggtaaatgttgaacacattataaataagaggacc 39309754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 41635359 - 41635273
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||| |||||  |||| |||||||||||| ||  ||| |||||||||||||| |||||||| ||||||| | |||||| |||||||    
T  41635359 tgttgttgtgtataagtatgagttatatgtttcccatcagataaaagagtaaatgttgaacaccttataaataagaggatccataaa 41635273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 42524719 - 42524792
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||| |||||||||||| |||||||| || |||||| |||||||||||||| | | ||||||| ||||||    
T  42524719 caagtgtgaattatatgtctcacatcggatagaaaagtaaa-gttgaacatcttatgaataagaggactcataaa 42524792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 5723949 - 5723876
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    ||||||||||||||||||||| || ||||||||||| | |||| ||||||||  ||||| || |||| ||||||    
T  5723949 tgcaagtgtgagttatatgtcccacatcggataaaataataaaagttgaacacattatatgtaagagaacccat 5723876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 301
Target Start/End: Original strand, 33747783 - 33747860
Alignment:
Q  224 ttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||| || ||||||||||| |||||||||| || |  |||||||| |||||| |||||||| ||| |||||||    
T  33747783 ttatatgtcccacatcggataaaatagtaaaggttaaatactttataagtaagaggatccataaactcattgccttaa 33747860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 289
Target Start/End: Complemental strand, 36522413 - 36522318
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||   | || ||||||||||||||||||||| || ||||| || | |  | ||||||||| |||||||| |||||||| ||||||    
T  36522413 ttgagggggagtgttg---tatgaaagtgtgagttatatgtctcacattggatagaaaaatggaagttgaacattttataagtgagaggaccaataaac 36522318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 2411010 - 2411084
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||  | || ||||| |  |||||| |||||||||||| ||||| |||| ||||||||||    
T  2411010 aagtgtgagttatatgtcctacattggatagagaagtaaaagttgaacatcttgtaagtaagagaacccataaac 2411084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 36522081 - 36521977
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca-tcttataagttagagga 280  Q
    ||||||| |||||||| ||||||||   || |||||||||||||||||||| || ||| |||| || |||  |||||||||| |||| ||| | ||||||    
T  36522081 gactcacacttgagggagagtgttg---tgcgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttgaacactctt-taaatgagagga 36521986  T
Q  281 cccataaac 289  Q
    |||||||||    
T  36521985 cccataaac 36521977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 795249 - 795196
Alignment:
Q  111 caagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagc 164  Q
    |||||| ||||||||| |||||||||||||||  |||||  |||||||||||||    
T  795249 caagcagcaagtggctccttgtgcagcaacggtgatacagacaaagtaaaaagc 795196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 6225047 - 6225104
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataag 272  Q
    |||| |||||||||| || || ||| ||||||||| ||||||||||||| ||||||||    
T  6225047 aagtctgagttatatatcccacatcagataaaagaataaaggttgaacaccttataag 6225104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 9498556 - 9498507
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||| ||||||||| ||||||||| |||||  |||||||||||||||    
T  9498556 acaagcagcaagtggctccttgtgcaggaacggtgatacatgcaaagtaa 9498507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 26591068 - 26590992
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||| ||| ||||  || |||| ||  || ||||||||||||||| ||||||||| |||||| |||||||    
T  26591068 tgcaagtgtgatttaaatgttccatatcgaatcgaaaagtaaaggttgaacaccttataagtaagaggatccataaa 26590992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 110 - 301
Target Start/End: Original strand, 4823541 - 4823744
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccactctaggggagc--------------gactcacgcttgag 195  Q
    ||||||||||||||||| ||||||||| || ||| |||||||||||||||||||||||| ||||||||||||              ||||||| |||||     
T  4823541 acaagcaacaagtggctccttgtgcaggaatggcgatacatgcaaagtaaaaagcttccgctctaggggagcacgttaaagtgatggactcacacttgaa 4823640  T
Q  196 ggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatag 295  Q
    |||||||||||  || ||||||||||||||||| |||||| ||||||||||| |||||| ||| |||| |||||||||  |||||||||||||| ||| |    
T  4823641 ggggagtgttg--gtttgcaagtgtgagttataagtctcacatcggataaaatagtaaaagttaaacaccttataagtaggaggacccataaactcattg 4823738  T
Q  296 ccttaa 301  Q
    ||||||    
T  4823739 ccttaa 4823744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 15773162 - 15773281
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||||||| |||||||    
T  15773162 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagaggac 15773261  T
Q  282 ccataaacacatagccttaa 301  Q
     ||||| | ||| |||||||    
T  15773262 tcataagctcattgccttaa 15773281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 54018004 - 54017897
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||||  | ||||||||||||||||||||||||||| ||||||||| |||||||    
T  54018004 gactcacacttgagggggagtattgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggac 54017905  T
Q  282 ccataaac 289  Q
     |||||||    
T  54017904 tcataaac 54017897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 22304541 - 22304658
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || |||||||||||| |||||||| || ||||||||||| ||||||||||||| | ||||||||| |||||||    
T  22304541 gactcacacttgagggggagtgttg--gtttgcaagtgtgagctatatgtcccacatcggataaaatagtaaaggttgaataccttataagtaagaggac 22304638  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||||||| |||||||    
T  22304639 ccataaacacattgccttaa 22304658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 31190007 - 31190091
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccata 286  Q
    ||||| ||||||||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31190007 tgttgttgtgtgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggacccata 31190091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 37990827 - 37990708
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    |||||||  |||||||||||||||| ||||| ||||||||||||||||||  || ||||||||||| |||||| |||||||| ||||||||| |||||||    
T  37990827 gactcacagttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggac 37990728  T
Q  282 ccataaacacatagccttaa 301  Q
     ||||||| ||| |||||||    
T  37990727 tcataaactcattgccttaa 37990708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 15772851 - 15772931
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  15772851 gtgtgcaagtgtgagttatatgtcccatatcggataaaagagtaaatgttgaacaccttataagtaagaggacccataaac 15772931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 37991146 - 37991046
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctta 300  Q
    |||||| ||||| |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||| |||||||| |||||| ||| ||||||    
T  37991146 gtgttgttgtgtacaagtgtgagttatatgtctcacattggataaaatagtaaaggttgaacaccttataagtaagaggacctataaactcatcgcctta 37991047  T
Q  301 a 301  Q
    |    
T  37991046 a 37991046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 25739593 - 25739506
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||||| |||||||||||||||    
T  25739593 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaac 25739506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 29645070 - 29644983
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||| ||||||||||| || |||||||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  29645070 tgttgttgtgtgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaac 29644983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 29644756 - 29644662
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| ||||  ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||    
T  29644756 gggggaatgtttttgtgtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaacccataaac 29644662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 42342556 - 42342470
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||||||||| || ||| |||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  42342556 tgttgttgtgtgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaa 42342470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 8327900 - 8327981
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||||||||||| |||| ||||||||||    
T  8327900 tgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaacccataaac 8327981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 21832528 - 21832412
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||| ||||||||    ||||||||||||||||||||||| || || ||||| || ||||||||||||||| ||||||||| |||||||    
T  21832528 gactcacacttgaggcggagtgtta---tgtgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagaggac 21832432  T
Q  282 ccataaacacatagccttaa 301  Q
     ||||||| |||||||||||    
T  21832431 tcataaactcatagccttaa 21832412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 289
Target Start/End: Original strand, 35946518 - 35946599
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  35946518 tgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaac 35946599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 51886561 - 51886638
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  51886561 tgcaagtgtgagttatatgtctcacatcgaataaaatagtaaaggttgaacatcatataagtaagaggacccataaac 51886638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 32462747 - 32462639
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagt-aaaggttgaacatcttataagttagagga 280  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || |||| || ||||||| |||||||||||| ||||||||| ||| ||    
T  32462747 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcgaatgaaagagtaaaaggttgaacaccttataagtaagatga 32462648  T
Q  281 cccataaac 289  Q
     ||||||||    
T  32462647 tccataaac 32462639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 43346960 - 43346860
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctta 300  Q
    |||||| ||||| ||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||| |||||||||| ||| ||||||    
T  43346960 gtgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattgcctta 43346861  T
Q  301 a 301  Q
    |    
T  43346860 a 43346860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 25755383 - 25755470
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    |||||| ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||||| ||||||| ||||||    
T  25755383 gtgttgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaa 25755470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 39914242 - 39914329
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||| |||| |||||||||| ||||||| | |||||||||||||||    
T  39914242 tgttgttgtgtgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaacaccttataaataagaggacccataaac 39914329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 42342278 - 42342159
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||| | ||||||  || |||||||||||||||||| ||| ||   ||||||||| |||||||    
T  42342278 gactcacacttgagggggagtgttgttgtgtgcaagtgtgattcatatgttccacatcggataaaagagtaaatgttcaatgccttataagtaagaggac 42342179  T
Q  282 ccataaacacatagccttaa 301  Q
     ||||||| ||| |||||||    
T  42342178 tcataaactcattgccttaa 42342159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 49336855 - 49336756
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| ||||||||||||| |||||||| |||||||| || |||||||||||| || ||||||||| ||||||||||||||| ||||| |||||    
T  49336855 tgttgttgtgtacaagtgtgagttacatgtctcacatcggatagaaaagtaaaggttgaccaccttataagtaagaggacccataaacccatagtcttaa 49336756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 53577354 - 53577453
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| || | || ||| ||||||||| || |||||||    
T  53577354 tgttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaacatcttaaaaataagtggatccataaacatattgccttaa 53577453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 41359949 - 41359834
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||||    | || |||||||| || ||||||||||||| | ||||||||| |||||||    
T  41359949 gactcacacttaagggggagtgttgttgtgtgcaagtgtgagttat----cccacatcggatacaatagtaaaggttgaataccttataagtaagaggac 41359854  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  41359853 ccataaacccattgccttaa 41359834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 33803414 - 33803333
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||| ||||||||||||||| || ||||||||||| ||||||||||||||| | ||||||| |||||||||||||||    
T  33803414 tgtgtgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaac 33803333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 289
Target Start/End: Original strand, 11661846 - 11662028
Alignment:
Q  122 tggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccactctagg-ggagc--------------gactcacgcttgagggggagtgttg 206  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||              ||||||| |||  ||||||||||||    
T  11661846 tggctccttgtgcagcaacggcgatacatgcaaagtaaaaagcttccgctctaggaggagcacgataaagtgatggactcacacttttgggggagtgttg 11661945  T
Q  207 ctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
     ||| || |||||||||||| ||| | || || |||||||||||||||||||||||| |||| |||| ||||| | |||||||    
T  11661946 ttgtatgtaagtgtgagttaaatgccccacattggataaaagagtaaaggttgaacaccttaaaagtgagaggcctcataaac 11662028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 12114730 - 12114643
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||| |||||||| || || |||||||| || ||||||||||||||| ||||||||| |||||||||||||||    
T  12114730 tgttgttgtgtgcaagtgtaagttatatatcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaac 12114643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 52634666 - 52634764
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||  ||||||||| ||| ||||||||||| ||| |||||||    
T  52634666 tgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaaga-gacccataaacccattgccttaa 52634764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 210 - 289
Target Start/End: Complemental strand, 54018358 - 54018279
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||||    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  54018358 tgtgcaagtgtgagttatatgtcctgcatcggataaaagagtaaagattgaacaccttataagtaagaggacccataaac 54018279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 22304218 - 22304297
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  22304218 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 22304297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 53118142 - 53118064
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||| |||| |||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||| ||||||    
T  53118142 tgttgttgtgggcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtgagagga 53118064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 45901702 - 45901803
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaag-agtaaaggttgaacatcttataagttagaggacccataaacacatagcctt 299  Q
    |||||| ||||| ||||||||||||||||||| || |||||||||||| |  |||||||||||| ||||||||| ||||||| ||||||| ||| |||||    
T  45901702 gtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaagaggacgcataaactcatggcctt 45901801  T
Q  300 aa 301  Q
    ||    
T  45901802 aa 45901803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 301
Target Start/End: Complemental strand, 39935104 - 39935024
Alignment:
Q  221 gagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||  | ||||||||||||||||||||||||||| ||||||||| |||||| |||||||| ||| |||||||    
T  39935104 gagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaa 39935024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 50612610 - 50612534
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| ||||||| ||||||| ||||||||| ||||||| ||||||    
T  50612610 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataaa 50612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 32589694 - 32589792
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||||||||||| ||||||| || ||  ||||||| | ||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  32589694 tgttgttgtgtgcaagtgtgagt-atatgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 32589792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 33175826 - 33175747
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataa 287  Q
    ||||| |||||||||||||||||||||| ||| |||| || ||||||||||||||| ||||||||| |||| ||||||||    
T  33175826 tgtgtacaagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataagtaagagaacccataa 33175747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 11661525 - 11661602
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagg 279  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| ||||| |||| |||||||||||||| |||||    
T  11661525 tgttggtgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaacggttaaacatcttataagtaagagg 11661602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 32463070 - 32462969
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagt-aaaggttgaacatcttataagttagaggacccataaacacatagcctt 299  Q
    |||||| ||||| ||||||||||||||||||| || |||||||| |||||| |||||||||| | ||||||||| ||| ||| ||||||| ||| |||||    
T  32463070 gtgttgttgtgtacaagtgtgagttatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaacccattgcctt 32462971  T
Q  300 aa 301  Q
    ||    
T  32462970 aa 32462969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 37726504 - 37726577
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||| | ||||||||| |||||| ||||    
T  37726504 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaatgttgaataccttataagtaagaggatccat 37726577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 39389070 - 39389147
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||||||||||  | ||||||||||| ||||||||||||||| |||| || | |||||||||||||||    
T  39389070 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttaaaactaagaggacccataaac 39389147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 1634483 - 1634395
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggata-aaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||| |  ||||||| ||||  |||||||| |||||||||||||||    
T  1634483 tgttgctgtgtgcaagtgtgagttatatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaac 1634395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 9240122 - 9240225
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||| |||||||||   ||||||||||||||||||||||  || |||||||| |  |||||| | |||||| ||||||||| |||||||    
T  9240122 gactcacacttgaggaggagtgttg---tgtgcaagtgtgagttatatgttccacatcggatagagaagtaaaagctgaacaccttataagtaagaggac 9240218  T
Q  282 ccataaa 288  Q
    |||||||    
T  9240219 ccataaa 9240225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 43346640 - 43346706
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatctta 268  Q
    ||||| |||||||||||||||||| |||||| || ||||||||||| ||||||||||||||| ||||    
T  43346640 tgttgttgtgtgcaagtgtgagttgtatgtcccacatcggataaaatagtaaaggttgaacacctta 43346706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 302
Target Start/End: Complemental strand, 45395815 - 45395721
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaat 302  Q
    ||||||||||||| |||||||| || || |||| ||||||||||||||||| ||||  |||||||| |||||| |||||||| ||| | ||||||    
T  45395815 tgtgtgcaagtgtaagttatatatcccacatcgaataaaagagtaaaggttaaacacgttataagtaagaggatccataaacccattgtcttaat 45395721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 22304136 - 22304024
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||| || ||||| ||||| ||||||||||||||||||| || ||| ||||||| ||||||||       |||||||||| || ||||    
T  22304136 gactcacacttgagggagaatgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaagg-------tcttataagtaagcggac 22304044  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  22304043 ccataaacccattgccttaa 22304024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 42584970 - 42584903
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||| || |||||||| |||||||||| ||||||| ||||||||| |||||| ||||||||    
T  42584970 agttatatgtcccacatcggatagaagagtaaagattgaacaccttataagtaagaggatccataaac 42584903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 3135224 - 3135154
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||||||||||| || ||||||||||| |||||| |||||||| ||||||||| | || ||||||||||    
T  3135224 gtgagttatatgtcccacatcggataaaatagtaaatgttgaacaccttataagtaaaagaacccataaac 3135154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 22303853 - 22303783
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgc-aaagtaaaaagcttccactctagggga 179  Q
    ||||||| |||||||||||||||||||||||||| || || || |||||||||||||||| || |||||||    
T  22303853 acaagcagcaagtggcttcttgtgcagcaacggcgattcaggcaaaagtaaaaagcttccgctttagggga 22303783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 44160702 - 44160625
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||| |||||||||| ||| || |||||||| | ||||||||||||| ||||||| | |||||| ||||||||    
T  44160702 tgcaagtgtcagttatatgtttcatattggataaaacaataaaggttgaacaccttataaataagaggatccataaac 44160625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 3135629 - 3135562
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttat 269  Q
    ||||| ||||| ||||||||||||||||||| ||  || |||||||||||||| |||||||| |||||    
T  3135629 tgttgttgtgtacaagtgtgagttatatgtcccacctcagataaaagagtaaaagttgaacaccttat 3135562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Complemental strand, 33362451 - 33362374
Alignment:
Q  215 aagtgtgagttatatg---tctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||   |||||  |||||||||| | ||||||||||| | ||||||||| |||||||||||||||    
T  33362451 aagtgtgagttatatgatatctcatgtcggataaaataataaaggttgaataccttataagtaagaggacccataaac 33362374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 7767476 - 7767395
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    |||||| |||| ||||||||||||| || |||||||| || ||||||||||| |||  |||||| | ||||||| |||||||    
T  7767476 tgtgtgtaagtctgagttatatgtcccacatcggatagaaaagtaaaggttggacactttataactaagaggactcataaac 7767395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 39336391 - 39336310
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||| || |||||||| ||   |  ||||||||||  |||||||| |||||| ||||||||    
T  39336391 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaagttggaggttgaacactttataagtgagaggatccataaac 39336310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 289
Target Start/End: Complemental strand, 3384427 - 3384347
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||| |||||||||||||| || ||  ||||||| |||| ||||| ||||  |||||||  |||||||||||||||    
T  3384427 gtgtgcaagcgtgagttatatgtcccacatatgataaaacagtataggttaaacactttataaggaagaggacccataaac 3384347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 47965077 - 47964984
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||||||||||| | | |||||||| || |||  ||||| |||||  ||||||| ||||| | ||||| | ||| |||||||    
T  47965077 tgtgtgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaacattatataagtgagagggctcataagcccattgccttaa 47964984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 12747914 - 12747878
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    ||||||||||||||||||||||||| || ||||||||    
T  12747914 tgtgtgcaagtgtgagttatatgtcccacatcggata 12747878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 9e-33; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 15880233 - 15880352
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||| ||||| ||||||| ||||| ||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||| |||||||    
T  15880233 gactcacacttaaggggaagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagaggac 15880332  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  15880333 ccataaacccattgccttaa 15880352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 38796406 - 38796299
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||| |||||||| ||||||||| |||||||    
T  38796406 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataagtaagaggac 38796307  T
Q  282 ccataaac 289  Q
    | ||||||    
T  38796306 ctataaac 38796299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 37106160 - 37106265
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| |||||||    
T  37106160 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 37106257  T
Q  282 ccataaac 289  Q
    ||||||||    
T  37106258 ccataaac 37106265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 190 - 301
Target Start/End: Complemental strand, 31468926 - 31468819
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||||||    |||||||||||||||    
T  31468926 cttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaatatcttata----agaggacccataaac 31468831  T
Q  290 acatagccttaa 301  Q
     ||| |||||||    
T  31468830 tcattgccttaa 31468819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 5542811 - 5542706
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || |||| |||||| ||||||||||||||| ||||||||| |||||||    
T  5542811 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccatatcgaataaaatagtaaaggttgaacaccttataagtaagaggac 5542714  T
Q  282 ccataaac 289  Q
    ||||||||    
T  5542713 ccataaac 5542706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 7598581 - 7598684
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||| ||||||||||  |||||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||||||    
T  7598581 gactcacacttgagagggagtgttg--gtgtgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggac 7598678  T
Q  282 ccataa 287  Q
    ||||||    
T  7598679 ccataa 7598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 28531499 - 28531383
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||   ||||||||||||||||||||||| || |||||||| || || |||||||||||| ||||||||| ||||| |    
T  28531499 gactcacacttgagggggagtgttg---tgtgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagaggtc 28531403  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  28531402 ccataaactcattgccttaa 28531383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 36178763 - 36178674
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  36178763 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 36178674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 41283633 - 41283544
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  41283633 tgcaagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaa 41283544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 296
Target Start/End: Original strand, 1769889 - 1769976
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagc 296  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||| ||||||| ||||||| ||||||    
T  1769889 gtgtgcaagtgtgagttatatgtcacacatcggataaaagagtaaaagttgaacaccttataagtaagaggactcataaactcatagc 1769976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 196 - 299
Target Start/End: Original strand, 6421369 - 6421472
Alignment:
Q  196 ggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatag 295  Q
    |||| |||||| ||||  ||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| ||| |    
T  6421369 ggggggtgttgttgtgcacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaactcattg 6421468  T
Q  296 cctt 299  Q
    ||||    
T  6421469 cctt 6421472  T

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Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 28254405 - 28254306
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||| ||||||| ||||||||| || |||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  28254405 tgttgttgtgtgccagtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaa 28254306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 269
Target Start/End: Complemental strand, 36785751 - 36785664
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttat 269  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||    
T  36785751 gactcacactttagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttat 36785664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 40733487 - 40733594
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||| ||||||  ||||| ||||||||||||||||||| || ||| ||||||| |||||| |||||||| ||||||||| |||||||    
T  40733487 gactcacacttgaggggaagtgttattgtgtacaagtgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagaggac 40733586  T
Q  282 ccataaac 289  Q
    ||||||||    
T  40733587 ccataaac 40733594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 29676873 - 29676971
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagga 280  Q
    ||||||| |||||||||| |||||| |||||||| |||||||||||||||| || |||||||||||||||||||||| |||| |||||| || ||||||    
T  29676873 gactcacacttgagggggtgtgttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggtttaacaccttataggtgagagga 29676971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 289
Target Start/End: Original strand, 6712964 - 6713053
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||| ||| | |||||||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||| |||||||||||||||    
T  6712964 agtgttgttgtatacaagtgtgagttatatgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaac 6713053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 14745825 - 14745736
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| || || |||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  14745825 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 14745736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 40679814 - 40679698
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||||||||||||   ||||||| ||||||||||||||| || |||||||| || ||||| ||||||||| ||||||||| |||| ||    
T  40679814 gactcacacttgagggggagtgttg---tgtgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacaccttataagtaagagaac 40679718  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  40679717 ccataaacccatcgccttaa 40679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 38796788 - 38796701
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||||||||||||||| || ||| ||||||| | ||||||||||||| ||||||||| |||||||||||||||    
T  38796788 tgttgttgtgtgcaagtgtgagttatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagaggacccataaac 38796701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 31899594 - 31899496
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctta 300  Q
    ||||| |||||| |||||||||||||||||  || ||||||||||| |||||| |||||||| ||||||||| ||||||||||||||| ||| ||||||    
T  31899594 tgttgttgtgtgaaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaactcattgcctta 31899496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 962598 - 962675
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || |||||||| || ||||||||||||||| ||||||||| |||||||||||||||    
T  962598 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaac 962675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 37105924 - 37106013
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||| || |||| |||||| ||||||||||||||| ||||||||| || |||||||||||| ||| |||||||    
T  37105924 tgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaactcattgccttaa 37106013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 40733853 - 40733950
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagg 279  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||||||| || |||| |||||||||||||| || |||| ||||||||| |||||    
T  40733853 gactcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaagatttaacaccttataagtaagagg 40733950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 16542438 - 16542538
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctta 300  Q
    |||||| ||||||||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||||||| | |||||||  |||||| ||| ||||||    
T  16542438 gtgttgttgtgtgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacttataaactcattgcctta 16542537  T
Q  301 a 301  Q
    |    
T  16542538 a 16542538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 294
Target Start/End: Complemental strand, 37632759 - 37632673
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacata 294  Q
    |||||||||||||||||||||||||  | ||||||||||| ||||||||||  |||| |||||||| ||||||||||||||| ||||    
T  37632759 tgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagaggacccataaacccata 37632673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 5543156 - 5543079
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||||||||| |||||| ||||||||    
T  5543156 tgcaagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggatccataaac 5543079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 35580885 - 35580793
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||||| || ||||||||||| | |||| |||||||| ||||||||| |||||| |||||||| ||| |||||||    
T  35580885 tgtgtgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagagga-ccataaacccattgccttaa 35580793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 42514649 - 42514738
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||||||||||  | ||| |||| || ||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  42514649 tgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccatcgccttaa 42514738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 15511661 - 15511576
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| ||||||||||||  ||||||||||| || | |||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  15511661 tgttgttgtgtgcaagtg--agttatatgtcacacaacggataaaagagtaaaggttgaacacgttataagtaagaggacccataaac 15511576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 33731653 - 33731725
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||| |||||| ||||||||    
T  33731653 gtgtgagttatatatctcacatcggataaaagagtaaaggttgagcaccttataagtaagaggatccataaac 33731725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 36178455 - 36178350
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||| ||  |||||||||| ||||||||| ||||| ||||||||| || ||||    
T  36178455 gactcacacttgagggggactgttg--gtttgcaagtgtgagttatatgtcccacttcggataaaatagtaaaggtggaacaccttataagtaaggggac 36178358  T
Q  282 ccataaac 289  Q
     |||||||    
T  36178357 tcataaac 36178350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 36006047 - 36005949
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||| ||||||||||||||||||| || |||| ||| || |||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  36006047 tgttgttgtgtacaagtgtgagttatatgtcccacatcgaatagaa-agtaaaagttgaacaccttataagtaagaggacccataaactcattgccttaa 36005949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 196 - 301
Target Start/End: Complemental strand, 14745466 - 14745363
Alignment:
Q  196 ggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatag 295  Q
    |||||||||||  || ||||| ||||||||||||||| || |||| |||||| ||||| ||||||||||||| |||||  |||||||||||||| ||| |    
T  14745466 ggggagtgttg--gtttgcaactgtgagttatatgtcccacatcgaataaaatagtaatggttgaacatcttgtaagtatgaggacccataaacccattg 14745369  T
Q  296 ccttaa 301  Q
    ||||||    
T  14745368 ccttaa 14745363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 5367451 - 5367544
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| |||||||||  |||||||| || |||||||||||||| |||||||||||| ||||||||| ||| || |||| |||||||| ||||||    
T  5367451 tgtgtacaagtgtgatatatatgtcccagatcggataaaagagcaaaggttgaacaccttataagtaagatgatccatgaacacataaccttaa 5367544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 31259787 - 31259697
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatc---ggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||| |||||| ||||| ||||||||||||||| |||   ||||||||||||||||||| |||| ||||||||| ||| |||||||||||    
T  31259787 tgttgttgtgtgtaagtgcgagttatatgtctcacatcatcggataaaagagtaaaggttcaacaccttataagtaagatgacccataaac 31259697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 6421289 - 6421352
Alignment:
Q  197 gggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttga 260  Q
    |||||||||| ||||| ||||||| ||||||||||| || ||||||||||||||||||||||||    
T  6421289 gggagtgttgttgtgtacaagtgtaagttatatgtcccacatcggataaaagagtaaaggttga 6421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 29676543 - 29676622
Alignment:
Q  220 tgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctt 299  Q
    |||||||||||||||| || |||||||||||||||| |||||||  |||||||| |||| |||||||||| ||| |||||    
T  29676543 tgagttatatgtctcacattggataaaagagtaaagattgaacacattataagtgagagaacccataaactcattgcctt 29676622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 30313149 - 30313266
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||| ||  ||| |||||||||| ||| ||||||||||||| |||||||| || |||  |||||||||| ||||||||| |||||||    
T  30313149 gactcacacttgaggggaaga-ttgttgtgtgcaagcgtgtgttatatgtctcacatcggatagaaaagtggaggttgaaca-cttataagtgagaggac 30313246  T
Q  282 ccataaacacatagccttaa 301  Q
    ||| |||| ||| |||||||    
T  30313247 ccaaaaactcattgccttaa 30313266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 3673055 - 3673120
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaa 247  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||||| || || ||||||||    
T  3673055 gactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaa 3673120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 7598225 - 7598317
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||||||||| ||||||||   | |||| ||| || |||||||||| |||| ||||||| | ||||||||||||||| |||||||||||    
T  7598225 gtgtgcaagtgtgaattatatgttctacatcgaatagaaaagtaaaggttcaacaccttataaataagaggacccataaactcatagccttaa 7598317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 30323435 - 30323553
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||  ||| |||||||||||||| |||||||||| |||||| |||| || | |  ||||||||||  ||| |||| |||||||    
T  30323435 gactcacacttgagggggaga-ttgttgtgtgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacactttagaagtgagaggac 30323533  T
Q  282 ccataaacacatagccttaa 301  Q
    | |||||| ||| |||||||    
T  30323534 ctataaactcattgccttaa 30323553  T

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Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 12529195 - 12529097
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||| ||| |||||||||||||||||||||  | |||  |||||| ||||||| ||||||| | ||||||| ||||||| ||||||| ||| |||||||    
T  12529195 gttgttgtatgcaagtgtgagttatatgtcctacatcaaataaaacagtaaagattgaacaccgtataagtaagaggactcataaactcattgccttaa 12529097  T

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Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 301
Target Start/End: Original strand, 6422126 - 6422199
Alignment:
Q  228 atgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| || ||| ||||||| |||||||||||||||  |||||| | ||||||||||||||| |||||||||||    
T  6422126 atgtcccacatcagataaaaaagtaaaggttgaacacattataattaagaggacccataaacccatagccttaa 6422199  T

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Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 9231245 - 9231322
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    |||||| |||| |||||||||||||||| ||| |||| || |||||||||||||||| |||||| | |||||| ||||    
T  9231245 tgtgtgtaagtatgagttatatgtctcatatcagatagaaaagtaaaggttgaacatattataaataagaggatccat 9231322  T

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Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 28254254 - 28254181
Alignment:
Q  228 atgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||| |||||||| || |||||||||||||||  |||||||| ||||||| ||||||||| | |||||||    
T  28254254 atgtctcacatcggatagaaaagtaaaggttgaacactttataagtaagaggactcataaacactttgccttaa 28254181  T

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Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 23346231 - 23346325
Alignment:
Q  208 tgtgtgcaagtgtgagttata--tgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||| |||||||||||||  ||||||| |||| ||| || |||||||||| |||| ||||||| | ||||| ||||||||| |||||||||||    
T  23346231 tgtgtgcgagtgtgagttatatatgtctcacatcgtatagaaaagtaaaggttaaacaccttataa-taagagggcccataaacccatagccttaa 23346325  T

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Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 36178304 - 36178240
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||| ||||||||||||||| ||||||||| || | |||||||||| ||| |||||||    
T  36178304 atcggataaaatagtaaaggttgaacaccttataagtaagggaacccataaacccattgccttaa 36178240  T

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Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 301
Target Start/End: Original strand, 16590884 - 16590972
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggat-aaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||||||||| || |||  || |||| |||||||||||||||      |||| ||||||||||||||||||| |||||||    
T  16590884 tgtgtgcaagtgtgagttatatgtcccacatcaaataaaaaaagtaaaggttgaaca------aagtaagaggacccataaacacattgccttaa 16590972  T

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Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 29873724 - 29873606
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||||  ||| |||||||||| ||| |||| ||||| || ||| |||| || |||  ||||||||||| ||||||||  ||||||    
T  29873724 gactcacacttgagggggaga-ttgttgtgtgcaagggtgtgttacatgtcccacatcagatagaaaagtggaggttgaacattttataagtgggaggac 29873626  T
Q  282 ccataaacacatagccttaa 301  Q
     ||||||| ||| |||||||    
T  29873625 tcataaactcattgccttaa 29873606  T

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Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 40163520 - 40163458
Alignment:
Q  223 gttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccat 285  Q
    |||||||||| || |||||||| || ||||||||||||||| ||||||||| ||| |||||||    
T  40163520 gttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccat 40163458  T

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Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 289
Target Start/End: Complemental strand, 33561613 - 33561532
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||||||||||  || ||| |||| || |||  ||||| ||||  |||||||| |||||||||||||||    
T  33561613 tgtgtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagaggacccataaac 33561532  T

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Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 29874188 - 29874092
Alignment:
Q  205 tgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    |||||||| |||||||| |||||||||| || ||| |||| || |||  ||||||||||  |||||| |  |||||||||||||| ||| |||||||    
T  29874188 tgctgtgtacaagtgtgtgttatatgtcccacatcagatagaaaagtggaggttgaacactttataattgggaggacccataaacccattgccttaa 29874092  T

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Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 289
Target Start/End: Complemental strand, 33953947 - 33953852
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaac 289  Q
    ||||||||||||||||   ||||||| ||||||||||| ||| || ||| |||| || |||  ||||||||||   ||||||| |||||||||||||||    
T  33953947 ttgagggggagtgttg---tgtgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacactatataagtgagaggacccataaac 33953852  T

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Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 41678554 - 41678448
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagtt--atatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagagg 279  Q
    ||||||| ||||| |||||||||||   ||||||||||||||||  |||||||||| ||| |||| || ||   ||||| ||||  |||||||| |||||    
T  41678554 gactcacacttgaaggggagtgttg---tgtgcaagtgtgagttatatatgtctcacatcagatagaaaaggggaggttaaacactttataagtgagagg 41678458  T
Q  280 acccataaac 289  Q
    ||||||||||    
T  41678457 acccataaac 41678448  T

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Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 40734251 - 40734298
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtc 232  Q
    |||| ||||||||||||||||  ||||| |||||||||||||||||||    
T  40734251 tcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtc 40734298  T

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Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 29676787 - 29676844
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttcc 168  Q
    ||||||| ||||||||| |||||||||||||||  ||||| || |||||||||||||||    
T  29676787 acaagcagcaagtggctccttgtgcagcaacggaaatacaagc-aagtaaaaagcttcc 29676844  T

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Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 14745566 - 14745517
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||||||||||||| ||||||||| |||||| |||||  ||||||||    
T  14745566 acaagcaacaagtggctccttgtgcaggaacggcgatacagacaaagtaa 14745517  T

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Target: scaffold0078 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 5327 - 5446
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| |||||||| |||| ||| ||||||||||||||||||||||||  || |||||||| || ||||||||||||||| ||||||||| |||||||    
T  5327 gactcacacttgagggagagttttgttgtgtgcaagtgtgagttatatgttccacatcggatagaacagtaaaggttgaacaccttataagtaagaggac 5426  T
Q  282 ccataaacacatagccttaa 301  Q
    |||||||| ||| |||||||    
T  5427 ccataaacccattgccttaa 5446  T

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Target: scaffold0078; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 300
Target Start/End: Original strand, 4972 - 5070
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagcctta 300  Q
    ||||| ||||||||||||||| |||||||||||| |||||| | || |||||||||| || ||||||||||| | | ||||||||||| ||| ||||||    
T  4972 tgttgttgtgtgcaagtgtgaattatatgtctcacatcggagagaacagtaaaggtttaatatcttataagtaaaaagacccataaactcattgcctta 5070  T

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Target: scaffold0391 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 1294 - 1175
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggac 281  Q
    ||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| || || |||||||||||||||||||||||| ||||||||  | |||||    
T  1294 gactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagaaaaaggac 1195  T
Q  282 ccataaacacatagccttaa 301  Q
     ||||||| ||| |||||||    
T  1194 tcataaacccattgccttaa 1175  T

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Target: scaffold0391; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 3173 - 3091
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacat 264  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||||||    
T  3173 gactcacacttgagggggagtgttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacat 3091  T

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Target: scaffold0702 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 214 - 301
Target Start/End: Complemental strand, 670 - 583
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  670 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa 583  T

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Target: scaffold0702; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 315 - 230
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacc 282  Q
    ||||||||||||  || ||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  315 gggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 230  T

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Target: scaffold0504 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 10267 - 10191
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaaca 290  Q
    |||||||||||||||||||||| |||||||||||  ||||| |||||||| ||||||||| ||||||||||||||||    
T  10267 caagtgtgagttatatgtctcacatcggataaaatggtaaaagttgaacaccttataagtaagaggacccataaaca 10191  T

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Target: scaffold0027 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 47350 - 47449
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacacatagccttaa 301  Q
    ||||| ||||||||||||||| ||| |||||||| ||| ||||||| ||||||| ||||||| ||||||||| |||| | |||||||| ||| |||||||    
T  47350 tgttgatgtgtgcaagtgtgaattaaatgtctcacatccgataaaatagtaaagtttgaacaccttataagtaagagaatccataaacccattgccttaa 47449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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