View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0498_low_26 (Length: 288)

Name: NF0498_low_26
Description: NF0498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0498_low_26
NF0498_low_26
[»] chr4 (65 HSPs)
chr4 (110-288)||(10246245-10246423)
chr4 (182-288)||(3244531-3244634)
chr4 (202-288)||(25483326-25483412)
chr4 (182-288)||(49076528-49076634)
chr4 (182-288)||(52884858-52884963)
chr4 (182-287)||(3341098-3341203)
chr4 (110-170)||(10246179-10246239)
chr4 (190-288)||(39404376-39404474)
chr4 (182-288)||(44620630-44620736)
chr4 (202-288)||(50002416-50002502)
chr4 (202-288)||(4955397-4955483)
chr4 (182-263)||(45489436-45489518)
chr4 (202-282)||(10245910-10245990)
chr4 (190-288)||(43174484-43174583)
chr4 (209-288)||(54017675-54017754)
chr4 (202-288)||(1731727-1731813)
chr4 (182-288)||(22028041-22028147)
chr4 (202-288)||(22183344-22183430)
chr4 (208-286)||(54741260-54741338)
chr4 (208-288)||(2740696-2740776)
chr4 (200-288)||(36572007-36572095)
chr4 (212-288)||(41370357-41370433)
chr4 (182-278)||(44621396-44621492)
chr4 (212-288)||(50630835-50630911)
chr4 (202-288)||(36608741-36608827)
chr4 (184-288)||(36629212-36629313)
chr4 (215-288)||(50459724-50459797)
chr4 (208-273)||(52884691-52884756)
chr4 (182-288)||(54108888-54108989)
chr4 (208-288)||(3340803-3340883)
chr4 (212-288)||(6975536-6975612)
chr4 (208-288)||(41707544-41707624)
chr4 (212-288)||(49880160-49880236)
chr4 (212-288)||(55933204-55933280)
chr4 (182-287)||(2741044-2741146)
chr4 (213-280)||(16889624-16889691)
chr4 (202-280)||(4390189-4390267)
chr4 (202-288)||(34646729-34646815)
chr4 (208-273)||(3700361-3700426)
chr4 (192-288)||(16888896-16888993)
chr4 (208-288)||(20825832-20825912)
chr4 (182-288)||(20826190-20826293)
chr4 (208-288)||(34004664-34004743)
chr4 (208-288)||(39404014-39404094)
chr4 (208-260)||(45050597-45050649)
chr4 (202-286)||(54017784-54017870)
chr4 (194-278)||(44620926-44621011)
chr4 (210-288)||(49302902-49302982)
chr4 (222-283)||(54343086-54343147)
chr4 (212-263)||(50788088-50788139)
chr4 (202-263)||(19504695-19504756)
chr4 (235-288)||(39699026-39699079)
chr4 (203-288)||(51768140-51768225)
chr4 (212-288)||(54108538-54108612)
chr4 (208-288)||(28034225-28034305)
chr4 (212-288)||(32941203-32941279)
chr4 (202-278)||(44620286-44620362)
chr4 (208-288)||(49076911-49076990)
chr4 (200-288)||(22028449-22028539)
chr4 (238-273)||(48111793-48111828)
chr4 (214-286)||(40067045-40067118)
chr4 (227-288)||(45496820-45496881)
chr4 (202-288)||(54936190-54936272)
chr4 (202-286)||(11348410-11348494)
chr4 (208-272)||(39792956-39793020)
[»] scaffold0734 (2 HSPs)
scaffold0734 (182-288)||(5747-5853)
scaffold0734 (202-288)||(5386-5472)
[»] chr7 (48 HSPs)
chr7 (182-288)||(7553995-7554101)
chr7 (182-285)||(30255309-30255412)
chr7 (191-288)||(22566744-22566841)
chr7 (183-288)||(30244241-30244346)
chr7 (182-282)||(30244671-30244771)
chr7 (182-288)||(37533092-37533196)
chr7 (202-288)||(7517570-7517656)
chr7 (190-288)||(30245055-30245153)
chr7 (200-288)||(1085698-1085786)
chr7 (190-285)||(30245472-30245567)
chr7 (202-288)||(40094856-40094942)
chr7 (201-288)||(47129084-47129171)
chr7 (203-280)||(36109007-36109084)
chr7 (195-288)||(45434619-45434712)
chr7 (202-288)||(16569186-16569272)
chr7 (202-288)||(16596390-16596476)
chr7 (202-288)||(22567121-22567206)
chr7 (202-288)||(24177425-24177511)
chr7 (210-288)||(36939815-36939893)
chr7 (202-288)||(41910676-41910762)
chr7 (208-288)||(28301625-28301705)
chr7 (208-288)||(36622956-36623036)
chr7 (208-288)||(40230373-40230453)
chr7 (182-288)||(14681482-14681586)
chr7 (202-288)||(23459-23545)
chr7 (183-288)||(1085330-1085436)
chr7 (214-288)||(6054562-6054636)
chr7 (202-288)||(34218116-34218202)
chr7 (208-288)||(8128523-8128603)
chr7 (212-288)||(29157565-29157641)
chr7 (202-288)||(36534866-36534952)
chr7 (202-288)||(43241485-43241571)
chr7 (202-288)||(45433231-45433317)
chr7 (219-288)||(11845198-11845267)
chr7 (202-273)||(24838799-24838870)
chr7 (202-288)||(118383-118469)
chr7 (208-262)||(40094502-40094556)
chr7 (202-288)||(45754706-45754791)
chr7 (215-288)||(9901648-9901719)
chr7 (202-255)||(36967344-36967397)
chr7 (220-288)||(19122740-19122807)
chr7 (217-263)||(44361570-44361616)
chr7 (215-288)||(37533446-37533519)
chr7 (208-272)||(41854631-41854694)
chr7 (217-288)||(30032572-30032643)
chr7 (215-281)||(20599317-20599383)
chr7 (133-179)||(37533213-37533259)
chr7 (185-229)||(48243218-48243262)
[»] chr5 (52 HSPs)
chr5 (182-288)||(26074864-26074970)
chr5 (182-288)||(26074582-26074688)
chr5 (182-288)||(13415842-13415947)
chr5 (202-288)||(15370089-15370175)
chr5 (202-288)||(26075244-26075330)
chr5 (202-288)||(6224186-6224272)
chr5 (202-288)||(12662734-12662820)
chr5 (202-288)||(36492299-36492385)
chr5 (202-288)||(40296397-40296483)
chr5 (182-288)||(3295097-3295204)
chr5 (183-285)||(26074231-26074330)
chr5 (208-288)||(41632778-41632858)
chr5 (202-288)||(299479-299565)
chr5 (218-288)||(41170640-41170710)
chr5 (208-288)||(35150003-35150082)
chr5 (182-288)||(6500795-6500898)
chr5 (214-288)||(18603202-18603276)
chr5 (202-288)||(35914839-35914925)
chr5 (185-288)||(624171-624272)
chr5 (208-288)||(1028599-1028679)
chr5 (212-288)||(9498736-9498812)
chr5 (212-288)||(27502118-27502194)
chr5 (212-288)||(32487394-32487469)
chr5 (212-282)||(6500451-6500520)
chr5 (202-288)||(25327925-25328011)
chr5 (182-288)||(31509594-31509699)
chr5 (208-288)||(3295426-3295505)
chr5 (208-288)||(36568649-36568729)
chr5 (212-263)||(623818-623869)
chr5 (202-288)||(11417059-11417143)
chr5 (202-288)||(35167920-35168006)
chr5 (208-282)||(39309680-39309754)
chr5 (202-288)||(42405678-42405764)
chr5 (212-285)||(5723876-5723949)
chr5 (201-254)||(35150736-35150789)
chr5 (201-254)||(35151027-35151080)
chr5 (217-285)||(38427553-38427620)
chr5 (182-247)||(13785732-13785794)
chr5 (182-224)||(15370384-15370426)
chr5 (214-288)||(26074320-26074394)
chr5 (214-287)||(7768852-7768925)
chr5 (212-288)||(29549337-29549413)
chr5 (182-263)||(24489311-24489389)
chr5 (191-288)||(36522319-36522413)
chr5 (208-278)||(300955-301025)
chr5 (202-288)||(34753107-34753193)
chr5 (202-288)||(41635273-41635359)
chr5 (214-288)||(42524719-42524792)
chr5 (111-164)||(795196-795249)
chr5 (110-159)||(9498507-9498556)
chr5 (224-288)||(33747783-33747847)
chr5 (182-288)||(36521978-36522081)
[»] chr1 (56 HSPs)
chr1 (182-288)||(34364895-34365001)
chr1 (182-288)||(44290540-44290644)
chr1 (182-288)||(26661604-26661710)
chr1 (182-288)||(22077577-22077680)
chr1 (182-288)||(3537229-3537333)
chr1 (182-288)||(41157345-41157451)
chr1 (202-288)||(41184507-41184593)
chr1 (182-282)||(37556081-37556182)
chr1 (183-288)||(11977251-11977356)
chr1 (208-288)||(17294573-17294653)
chr1 (201-280)||(34364496-34364575)
chr1 (202-288)||(41156981-41157067)
chr1 (215-288)||(50052105-50052178)
chr1 (208-288)||(22077910-22077990)
chr1 (208-288)||(24600396-24600476)
chr1 (212-288)||(44290907-44290983)
chr1 (208-287)||(45084378-45084457)
chr1 (202-288)||(21378123-21378209)
chr1 (210-288)||(41142370-41142448)
chr1 (202-285)||(31767246-31767329)
chr1 (182-288)||(48588570-48588674)
chr1 (222-288)||(5528836-5528902)
chr1 (202-288)||(26661980-26662066)
chr1 (202-288)||(37850682-37850768)
chr1 (214-288)||(38804437-38804511)
chr1 (208-288)||(66554-66634)
chr1 (212-288)||(32594798-32594874)
chr1 (213-288)||(3550721-3550796)
chr1 (214-273)||(34649440-34649499)
chr1 (182-288)||(66169-66274)
chr1 (202-288)||(29798189-29798275)
chr1 (202-259)||(35154150-35154207)
chr1 (203-280)||(40082398-40082475)
chr1 (208-288)||(3875413-3875493)
chr1 (212-288)||(5320047-5320123)
chr1 (182-288)||(30630720-30630823)
chr1 (212-288)||(41759483-41759559)
chr1 (201-288)||(39066282-39066369)
chr1 (216-285)||(9955911-9955981)
chr1 (110-159)||(26661748-26661797)
chr1 (208-288)||(44685452-44685533)
chr1 (208-288)||(1187446-1187526)
chr1 (217-288)||(3537681-3537752)
chr1 (215-282)||(37555733-37555800)
chr1 (208-278)||(4878799-4878869)
chr1 (218-288)||(5575110-5575180)
chr1 (192-263)||(50469188-50469256)
chr1 (208-288)||(1188670-1188750)
chr1 (220-288)||(14318875-14318943)
chr1 (190-244)||(22077248-22077299)
chr1 (208-288)||(22793274-22793354)
chr1 (212-263)||(45494085-45494137)
chr1 (182-244)||(50051777-50051837)
chr1 (239-288)||(4956218-4956267)
chr1 (235-288)||(22077192-22077245)
chr1 (212-288)||(24132067-24132143)
[»] chr3 (55 HSPs)
chr3 (182-287)||(15773162-15773267)
chr3 (110-288)||(4823541-4823731)
chr3 (182-288)||(54017898-54018004)
chr3 (202-286)||(31190007-31190091)
chr3 (209-288)||(15772851-15772930)
chr3 (182-288)||(22304541-22304645)
chr3 (202-288)||(25739507-25739593)
chr3 (202-288)||(29644984-29645070)
chr3 (182-288)||(37990721-37990827)
chr3 (202-288)||(42342470-42342556)
chr3 (195-288)||(29644663-29644756)
chr3 (208-288)||(8327900-8327980)
chr3 (208-288)||(35946518-35946598)
chr3 (212-288)||(51886561-51886637)
chr3 (201-288)||(25755383-25755470)
chr3 (182-288)||(32462640-32462747)
chr3 (201-288)||(37991059-37991146)
chr3 (182-263)||(22304218-22304297)
chr3 (202-288)||(39914242-39914328)
chr3 (208-288)||(33803334-33803414)
chr3 (202-288)||(1634396-1634483)
chr3 (201-288)||(43346873-43346960)
chr3 (122-288)||(11661846-11662027)
chr3 (202-288)||(12114644-12114730)
chr3 (182-288)||(42342172-42342278)
chr3 (202-288)||(49336769-49336855)
chr3 (202-280)||(53118064-53118142)
chr3 (202-264)||(53577354-53577416)
chr3 (210-288)||(54018280-54018358)
chr3 (182-288)||(41359847-41359949)
chr3 (182-288)||(21832425-21832528)
chr3 (212-288)||(50612534-50612610)
chr3 (208-287)||(33175747-33175826)
chr3 (202-288)||(52634666-52634751)
chr3 (202-279)||(11661525-11661602)
chr3 (212-285)||(37726504-37726577)
chr3 (202-263)||(43346640-43346701)
chr3 (182-288)||(9240122-9240225)
chr3 (212-288)||(39389070-39389146)
chr3 (208-288)||(45395735-45395815)
chr3 (201-288)||(45901702-45901790)
chr3 (182-257)||(22304061-22304136)
chr3 (221-288)||(39935037-39935104)
chr3 (110-179)||(22303783-22303853)
chr3 (202-288)||(32589694-32589779)
chr3 (201-288)||(32462982-32463070)
chr3 (222-288)||(42584904-42584970)
chr3 (219-288)||(3135155-3135224)
chr3 (202-263)||(3135568-3135629)
chr3 (208-288)||(7767396-7767476)
chr3 (208-288)||(39336311-39336391)
chr3 (212-288)||(44160626-44160702)
chr3 (209-288)||(3384348-3384427)
chr3 (215-288)||(33362375-33362451)
chr3 (208-244)||(12747878-12747914)
[»] scaffold0171 (1 HSPs)
scaffold0171 (182-288)||(17538-17644)
[»] chr8 (59 HSPs)
chr8 (182-288)||(9309325-9309431)
chr8 (182-288)||(8918846-8918952)
chr8 (182-288)||(30359579-30359685)
chr8 (190-288)||(34835187-34835285)
chr8 (190-263)||(45122984-45123057)
chr8 (208-288)||(45122139-45122219)
chr8 (201-288)||(8794100-8794187)
chr8 (182-284)||(18372342-18372442)
chr8 (202-288)||(30359261-30359347)
chr8 (202-288)||(43274861-43274947)
chr8 (182-263)||(147799-147880)
chr8 (182-288)||(3670032-3670136)
chr8 (190-288)||(9482686-9482782)
chr8 (182-288)||(34835444-34835551)
chr8 (182-288)||(34835710-34835817)
chr8 (202-288)||(147441-147527)
chr8 (202-288)||(3038372-3038458)
chr8 (214-288)||(25561898-25561972)
chr8 (182-288)||(45121738-45121843)
chr8 (219-288)||(70356-70425)
chr8 (208-288)||(9608741-9608821)
chr8 (208-288)||(41972154-41972234)
chr8 (182-288)||(1013953-1014057)
chr8 (208-288)||(9308973-9309055)
chr8 (210-284)||(18372785-18372859)
chr8 (202-288)||(33113449-33113535)
chr8 (214-288)||(37544572-37544646)
chr8 (210-288)||(45121992-45122070)
chr8 (208-288)||(1513997-1514077)
chr8 (212-288)||(3669687-3669763)
chr8 (182-288)||(40518555-40518658)
chr8 (233-288)||(9483269-9483324)
chr8 (201-286)||(6876946-6877032)
chr8 (215-265)||(32640632-32640682)
chr8 (214-288)||(40579588-40579662)
chr8 (219-288)||(41416253-41416322)
chr8 (212-288)||(1014327-1014403)
chr8 (212-288)||(5420651-5420727)
chr8 (182-261)||(6731876-6731953)
chr8 (182-264)||(18371762-18371842)
chr8 (182-256)||(18372485-18372557)
chr8 (212-288)||(20870655-20870733)
chr8 (222-285)||(25561729-25561792)
chr8 (201-288)||(34834865-34834952)
chr8 (182-288)||(18373013-18373118)
chr8 (110-159)||(3669945-3669994)
chr8 (208-288)||(4154748-4154828)
chr8 (208-288)||(9620758-9620838)
chr8 (208-263)||(20995508-20995563)
chr8 (212-263)||(30441081-30441132)
chr8 (237-288)||(45122649-45122700)
chr8 (219-261)||(6651510-6651552)
chr8 (217-263)||(20130454-20130500)
chr8 (208-244)||(18645713-18645749)
chr8 (216-280)||(43398161-43398225)
chr8 (214-288)||(18372685-18372758)
chr8 (110-159)||(1014095-1014144)
chr8 (216-273)||(18380114-18380171)
chr8 (182-235)||(43274702-43274755)
[»] chr6 (37 HSPs)
chr6 (182-288)||(2578525-2578630)
chr6 (202-288)||(2579954-2580040)
chr6 (182-288)||(29518892-29518996)
chr6 (182-288)||(16108033-16108139)
chr6 (212-288)||(35210204-35210280)
chr6 (182-288)||(3409632-3409736)
chr6 (202-288)||(593791-593877)
chr6 (195-288)||(2378111-2378202)
chr6 (182-272)||(2579203-2579293)
chr6 (191-288)||(16454886-16454983)
chr6 (212-288)||(26544049-26544125)
chr6 (212-288)||(29518503-29518579)
chr6 (212-288)||(32741179-32741255)
chr6 (214-288)||(2377756-2377830)
chr6 (212-288)||(3409259-3409335)
chr6 (182-288)||(10074445-10074548)
chr6 (212-288)||(14748420-14748496)
chr6 (214-288)||(5832108-5832182)
chr6 (218-288)||(9062431-9062501)
chr6 (202-288)||(16107668-16107754)
chr6 (215-288)||(1950267-1950340)
chr6 (212-288)||(1846748-1846824)
chr6 (190-288)||(10074073-10074168)
chr6 (202-288)||(16454565-16454651)
chr6 (212-288)||(3058226-3058302)
chr6 (217-288)||(32460662-32460733)
chr6 (208-288)||(10073698-10073776)
chr6 (212-288)||(1127360-1127436)
chr6 (216-288)||(3415462-3415534)
chr6 (209-288)||(5958685-5958764)
chr6 (218-283)||(2843560-2843625)
chr6 (215-288)||(6999878-6999951)
chr6 (212-288)||(10911565-10911642)
chr6 (182-232)||(8481898-8481947)
chr6 (185-288)||(2578917-2579016)
chr6 (182-288)||(2579574-2579677)
chr6 (208-288)||(6071128-6071208)
[»] chr2 (53 HSPs)
chr2 (182-288)||(38796300-38796406)
chr2 (182-288)||(37106160-37106264)
chr2 (182-288)||(15880233-15880339)
chr2 (182-288)||(5542707-5542811)
chr2 (182-287)||(7598581-7598684)
chr2 (190-272)||(31468844-31468926)
chr2 (182-263)||(36785670-36785751)
chr2 (182-280)||(29676873-29676971)
chr2 (182-288)||(40733487-40733593)
chr2 (196-288)||(6421369-6421461)
chr2 (200-288)||(6712964-6713052)
chr2 (182-288)||(28531396-28531499)
chr2 (212-288)||(36178687-36178763)
chr2 (212-288)||(41283557-41283633)
chr2 (209-288)||(1769889-1769968)
chr2 (202-288)||(28254319-28254405)
chr2 (202-288)||(38796702-38796788)
chr2 (182-279)||(40733853-40733950)
chr2 (212-288)||(962598-962674)
chr2 (212-288)||(14745749-14745825)
chr2 (208-288)||(37632679-37632759)
chr2 (182-288)||(40679711-40679814)
chr2 (202-288)||(15511577-15511661)
chr2 (202-288)||(31899508-31899594)
chr2 (212-288)||(5543080-5543156)
chr2 (201-281)||(16542438-16542518)
chr2 (220-288)||(29676543-29676611)
chr2 (212-288)||(37105924-37106000)
chr2 (197-260)||(6421289-6421352)
chr2 (217-288)||(33731653-33731724)
chr2 (182-288)||(36178351-36178455)
chr2 (208-282)||(35580811-35580885)
chr2 (182-247)||(3673055-3673120)
chr2 (208-285)||(9231245-9231322)
chr2 (212-288)||(42514649-42514725)
chr2 (202-288)||(31259698-31259787)
chr2 (202-288)||(36005962-36006047)
chr2 (196-288)||(14745376-14745466)
chr2 (182-284)||(30313149-30313249)
chr2 (182-288)||(30323435-30323540)
chr2 (208-273)||(5367451-5367516)
chr2 (228-288)||(6422126-6422186)
chr2 (228-288)||(28254194-28254254)
chr2 (208-288)||(33561533-33561613)
chr2 (191-288)||(33953853-33953947)
chr2 (185-232)||(40734251-40734298)
chr2 (182-288)||(41678449-41678554)
chr2 (110-168)||(29676787-29676844)
chr2 (182-288)||(29873619-29873724)
chr2 (223-285)||(40163458-40163520)
chr2 (203-288)||(12529110-12529195)
chr2 (110-159)||(14745517-14745566)
chr2 (208-263)||(16590884-16590940)
[»] scaffold0391 (2 HSPs)
scaffold0391 (182-264)||(3091-3173)
scaffold0391 (182-272)||(1204-1294)
[»] scaffold0078 (2 HSPs)
scaffold0078 (182-288)||(5327-5433)
scaffold0078 (202-288)||(4972-5058)
[»] scaffold0702 (2 HSPs)
scaffold0702 (214-288)||(596-670)
scaffold0702 (195-282)||(230-315)
[»] scaffold0504 (1 HSPs)
scaffold0504 (214-288)||(10193-10267)
[»] scaffold0027 (1 HSPs)
scaffold0027 (202-288)||(47350-47436)


Alignment Details
Target: chr4 (Bit Score: 155; Significance: 3e-82; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 110 - 288
Target Start/End: Original strand, 10246245 - 10246423
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccactctaggggagcgactcacgcttgagggggagtgttgctg 209  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  10246245 acaagcaacaagtggcttcttgtgcagcaatggctatacatgcaaagtaaaaagcttccactctaggggagcgactcacgcttgagggggagtgctgttg 10246344  T
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10246345 tgtgcaagtgtctgttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 10246423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 3244634 - 3244531
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||||||| |||| ||||||||   |||||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||| |||||||    
T  3244634 gactcacgcttaagggagagtgttg---tgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagaggac 3244538  T
Q  282 ccataaa 288  Q
    |||||||    
T  3244537 ccataaa 3244531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 25483326 - 25483412
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||| |||||||    
T  25483326 tgttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagaggatccataaa 25483412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 49076634 - 49076528
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||||  || ||||||||||| |||||||||||||||  |||||||| |||||||    
T  49076634 gactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacaccttataagtaagaggac 49076535  T
Q  282 ccataaa 288  Q
    | |||||    
T  49076534 ctataaa 49076528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 52884858 - 52884963
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||     
T  52884858 gactcacacttgagggg-agtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggat 52884956  T
Q  282 ccataaa 288  Q
    |||||||    
T  52884957 ccataaa 52884963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 3341098 - 3341203
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||  |||||||| ||||||||||||||||||||||||| || || ||||||||||||||||||| ||||  |||||||| |||||||    
T  3341098 gactcacacttgaggcagagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactttataagtaagaggac 3341197  T
Q  282 ccataa 287  Q
    ||||||    
T  3341198 ccataa 3341203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 10246179 - 10246239
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccac 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10246179 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccac 10246239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 39404376 - 39404474
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||| || ||| ||||||||||||||||| |||||  |||||||| ||||||||||||||    
T  39404376 cttgaggaggagtgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagaggacccataaa 39404474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 44620630 - 44620736
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||| ||||||| | ||||||||||||||||||||||||| || ||||||| ||| |||| ||||||||||  |||||||| |||||||    
T  44620630 gactcacacttgaggtggagtgtcgttgtgtgcaagtgtgagttatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagaggac 44620729  T
Q  282 ccataaa 288  Q
    |||||||    
T  44620730 ccataaa 44620736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 50002416 - 50002502
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  || ||||| ||||||||||||||    
T  50002416 tgttgttgtttgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaa 50002502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 4955483 - 4955397
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||  |||||||| ||||||| ||||||    
T  4955483 tgttgttgtgtgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagaggactcataaa 4955397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 45489518 - 45489436
Alignment:
Q  182 gactcacgcttgaggggg-agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| |||||||||| ||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  45489518 gactcacacttgaggggggagtgttgttgtgtacaagtgtgaattatatgtctcacatcggataaaagagtaaaggttgaaca 45489436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 10245910 - 10245990
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacc 282  Q
    ||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||||||  |||||||| ||||||||    
T  10245910 tgttgttgtgtgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacc 10245990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 43174484 - 43174583
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggat-aaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||| ||||| ||||||||||||||||| | || ||| ||| ||||||||||||||||||||  |||||||| ||||||| ||||||    
T  43174484 cttgagggggagtgttgttgtgtacaagtgtgagttatatgccacacatcagataaaaagagtaaaggttgaacaccttataagtaagaggacacataaa 43174583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 209 - 288
Target Start/End: Complemental strand, 54017754 - 54017675
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||| ||  || ||||||| |||||||||||||||| |||||||| ||||||||||||||    
T  54017754 gtgtgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaa 54017675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 1731813 - 1731727
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||| ||||||||||||||| || ||| ||||||| |||||||||||||||| |||||| | ||||||||||||||    
T  1731813 tgttgttgtgtgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaa 1731727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 22028147 - 22028041
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||| ||| || |||||| ||||||||||||||| ||||||||| || ||||||||||| |  ||||||||||||  |||||||| |||||||    
T  22028147 gactcacacttaaggaggggtgttgttgtgtgcaagtgtgacttatatgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagaggac 22028048  T
Q  282 ccataaa 288  Q
    |||||||    
T  22028047 ccataaa 22028041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 22183430 - 22183344
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||||||| || || |||||||||||||||||| ||||||||  |||||||| | ||||||||||||    
T  22183430 tgttgttgtgtgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaa 22183344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 54741338 - 54741260
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccata 286  Q
    ||||||||||||||| |||||||||||| |||||||| || |||||||||||||||  |||||||| ||||||||||||    
T  54741338 tgtgtgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccata 54741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 2740696 - 2740776
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || |||||||| || |||||||||||||||  |||||||| |||||||| |||||    
T  2740696 tgtgtgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctataaa 2740776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 288
Target Start/End: Original strand, 36572007 - 36572095
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||| ||||| ||||||||||||||||||| || |||| ||||||||||||| ||||||||  |||||||| ||| ||||||||||    
T  36572007 agtgttgttgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaa 36572095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 41370357 - 41370433
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||| |  |||||||| ||||||||||||||    
T  41370357 tgcaagtgtgagttatatgtcccaaatcggataaaatagtaaatgttgaaaaccttataagtaagaggacccataaa 41370433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 44621396 - 44621492
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagag 278  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||||||  | || |||||||| |||||||||| ||||  |||||||| ||||    
T  44621396 gactcacacttgagggggagtgtcgttgtgtgcaagtgtgagttatatgtccaacatgggataaaacagtaaaggttaaacaccttataagtaagag 44621492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 50630911 - 50630835
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| ||||||||||||||  | ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  50630911 tgcaagcgtgagttatatgtcctacatcggataaaatagtaaaggttgaacacattataagtaagaggacccataaa 50630835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 36608827 - 36608741
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||||||||||  | |||||||||||||||||| ||||||||  | |||||| |||||| |||||||    
T  36608827 tgttgttgtgtgcaagtgtgagttatatgtccaacatcggataaaagagtaaaagttgaacacctcataagtaagaggatccataaa 36608741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 184 - 288
Target Start/End: Original strand, 36629212 - 36629313
Alignment:
Q  184 ctcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggaccc 283  Q
    ||||| |||||||||||||||||   ||| ||||||||||||||||||| || |||||||| || |||||| ||| ||||  |||||||| |||||||||    
T  36629212 ctcacacttgagggggagtgttg---tgttcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaagaggaccc 36629308  T
Q  284 ataaa 288  Q
    |||||    
T  36629309 ataaa 36629313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 50459724 - 50459797
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||  || ||||| |||||||||||||||||||||| |||||||| ||||||| ||||||    
T  50459724 aagtgtgagttatatgttccacatcggttaaaagagtaaaggttgaacatcttataagtaagaggactcataaa 50459797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 52884691 - 52884756
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagt 273  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||  ||||||||    
T  52884691 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagt 52884756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 54108888 - 54108989
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||| |||||||||||||   ||||||||||| ||||||  ||| || ||||||||||| |||||||||||||||  |||||||| |||||||    
T  54108888 gactcacacttaagggggagtgttg---tgtgcaagtgtcagttat--gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 54108982  T
Q  282 ccataaa 288  Q
    |||||||    
T  54108983 ccataaa 54108989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 3340803 - 3340883
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| |  ||| ||| |||||||||||||||| ||  |||||||| ||||||||||||||    
T  3340803 tgtgtgcaagtgtgagttatatgtcccgcatcagatgaaagagtaaaggttgagcaccttataagtaagaggacccataaa 3340883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 6975612 - 6975536
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||| ||| ||||||| ||||||||||||| || |||||||| ||||||| ||||||    
T  6975612 tgcaaatgtgagttatatgtctcacatccgataaaatagtaaaggttgaatatcttataagtaagaggactcataaa 6975536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 41707624 - 41707544
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||   ||||||| | || |||||||||    
T  41707624 tgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccatataagtaaaagaacccataaa 41707544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 49880160 - 49880236
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || || | |||||| |||||||||||||||  |||||||| ||||||||||||||    
T  49880160 tgcaagtgtgagttatatgtcccacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 49880236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 55933280 - 55933204
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||  | ||||||||||| ||||| |||||||||  |||||||| ||||||||||||||    
T  55933280 tgcaagtgtgagttatatgtcctacatcggataaaatagtaagggttgaacaccttataagtaagaggacccataaa 55933204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 2741044 - 2741146
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||| ||||||||||    ||||||||||||||||||||||| || ||| |||| || ||||||||||||| |  |||||||| |||||||    
T  2741044 gactcacacttgaaggggagtgtta---tgtgcaagtgtgagttatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagaggac 2741140  T
Q  282 ccataa 287  Q
    ||||||    
T  2741141 ccataa 2741146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 16889691 - 16889624
Alignment:
Q  213 gcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagagga 280  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||| |  |||||||| ||||||    
T  16889691 gcaagtgtgagttatatgtctcaaatcggatagaaaagtaaaggttgaataccttataagtaagagga 16889624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 4390267 - 4390189
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagagga 280  Q
    ||||| ||||||||||||||||||| || || || ||| |||||||||||||||||||||||  |||||||| ||||||    
T  4390267 tgttgttgtgtgcaagtgtgagttacatatcccacatcagataaaagagtaaaggttgaacaccttataagtaagagga 4390189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 34646815 - 34646729
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||| ||||||||  |||||| | ||||||| ||||||    
T  34646815 tgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaa 34646729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 3700361 - 3700426
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagt 273  Q
    |||||||||||||||||||||||||  | |||||||||||||||||| ||||||||  ||||||||    
T  3700361 tgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagt 3700426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 288
Target Start/End: Complemental strand, 16888993 - 16888896
Alignment:
Q  192 tgagggggagtgttgctgtgtg-caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||| ||||||| |||||| ||||||||||||||||||| || |||||||| || ||||||||||||| |  |||||||| |||| ||| |||||    
T  16888993 tgaggggaagtgttgttgtgtggcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaacctataaa 16888896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 20825832 - 20825912
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||| ||||||||||||||  || |||||||||||||||||||||||||||  |||||| | |||| |||||||||    
T  20825832 tgtgtacaaatgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataaataagagcacccataaa 20825912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 20826190 - 20826293
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||    |||  || ||||||||||||||| || ||||||||||| |||||| ||||||||  |||||||| |||| ||    
T  20826190 gactcacacttgagggggagtgtta---tgtagaaatgtgagttatatgtcccacatcggataaaatagtaaaagttgaacacgttataagtaagagaac 20826286  T
Q  282 ccataaa 288  Q
    |||||||    
T  20826287 ccataaa 20826293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 34004743 - 34004664
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || ||  ||||||| | |||||||||||||  |||||||| ||||||||||||||    
T  34004743 tgtgtgcaagtgtgagttatatgtcacacatatgataaaa-actaaaggttgaacaacttataagtaagaggacccataaa 34004664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 39404014 - 39404094
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||||  | || | ||||||||||||||||||||||  |||||||| ||||||| ||||||    
T  39404014 tgtgtacaagtgtgagttatatgtcctacattgaataaaagagtaaaggttgaacactttataagtaagaggactcataaa 39404094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 45050597 - 45050649
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttga 260  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  45050597 tgtgtgcaagtgtgagttatatgtctcacatcaaataaaagagtaaaggttga 45050649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 54017870 - 54017784
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctc--aaatcggataaaagagtaaaggttgaacatattataagttagaggacccata 286  Q
    ||||| ||||||||| |||||||||||| | ||  | ||||||||||| |||||||||||||||  |||||||| ||||||||||||    
T  54017870 tgttgttgtgtgcaaatgtgagttatatatatcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccata 54017784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 44620926 - 44621011
Alignment:
Q  194 agggggagtgttgctgtgtgcaagtgtgagttatatgtctcaa-atcggataaaagagtaaaggttgaacatattataagttagag 278  Q
    ||||||||||||| ||||  ||||||||||||| ||||| ||| |||||||||||  ||||||||||||||  |||||||| ||||    
T  44620926 agggggagtgttgttgtggacaagtgtgagttagatgtcccaacatcggataaaactgtaaaggttgaacaccttataagtaagag 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 288
Target Start/End: Original strand, 49302902 - 49302982
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattat--aagttagaggacccataaa 288  Q
    |||| |||||||||||||||||| || |||  |||||| |||||||||||||||| ||||  |||| ||||||||||||||    
T  49302902 tgtgtaagtgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaacatcttataaaagtaagaggacccataaa 49302982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 54343147 - 54343086
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggaccc 283  Q
    ||||||||||| || ||||||||||| |||||||||||||||  |||||||| |||||||||    
T  54343147 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccc 54343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 50788139 - 50788088
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||||| ||||||||||| || ||||||||||| |||||||||||||||    
T  50788139 tgcaagtgtaagttatatgtcccacatcggataaaatagtaaaggttgaaca 50788088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 19504695 - 19504756
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||| ||||| ||||| ||||||||||||| || ||||||||||| |||||| ||||||||    
T  19504695 tgttgttgtgtacaagtatgagttatatgtcccatatcggataaaatagtaaaagttgaaca 19504756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 39699079 - 39699026
Alignment:
Q  235 aaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||| || ||||||||||||||||||| ||||| |||||| |||||||    
T  39699079 aaatcggatataaaagtaaaggttgaacatattctaagtaagaggatccataaa 39699026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 51768225 - 51768140
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||| ||||||||| |||||||||||||||  | |||| ||| ||||||||| ||||||||  |||||| | ||||||| ||||||    
T  51768225 gttgttgtgtgcaaatgtgagttatatgtcctatatcgaatataagagtaaatgttgaacaccttataaataagaggactcataaa 51768140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 54108538 - 54108612
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||  ||| || || |||||||| |||||||||||||||  |||||||| | ||||||||||||    
T  54108538 tgcaagtgtgagttat--gtcccatataggataaaatagtaaaggttgaacaccttataagtaaaaggacccataaa 54108612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 28034225 - 28034305
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||| ||||||||| |  |||||||| || |||  ||||||||||  |||||||| |||| |||||||||    
T  28034225 tgtgtgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataagtgagagaacccataaa 28034305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 32941279 - 32941203
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||| | |||||| | || |||||||||||||||  |||||| | ||||| | ||||||    
T  32941279 tgcaagtgtgagttatatgtcttacatcggaaagaacagtaaaggttgaacaccttataaataagagggctcataaa 32941203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 44620286 - 44620362
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagag 278  Q
    ||||| ||||| ||| | ||||||||||||| || || |||||||| |||||||||||||||  |||||||| ||||    
T  44620286 tgttgttgtgtacaaatatgagttatatgtcccacatgggataaaatagtaaaggttgaacaccttataagtaagag 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 49076990 - 49076911
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||  || || || ||||| |||||||||||||||  |||| ||| |||| |||||||||    
T  49076990 tgtgtgcaagtgtgagttatatgttccatattggctaaaatagtaaaggttgaacaccttat-agtaagagaacccataaa 49076911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 288
Target Start/End: Complemental strand, 22028539 - 22028449
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggat--aaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||| ||||||||||||| | |||||||||  | |||||||  |||| | |||||||||||||  |||| ||| ||||||||||||||    
T  22028539 agtgttgttgtgtgcaagtgttacttatatgtcctacatcggataaaaaaaaataaaggttgaacaccttattagtaagaggacccataaa 22028449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 238 - 273
Target Start/End: Complemental strand, 48111828 - 48111793
Alignment:
Q  238 tcggataaaagagtaaaggttgaacatattataagt 273  Q
    |||||||||||||||||||||||||| |||||||||    
T  48111828 tcggataaaagagtaaaggttgaacacattataagt 48111793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 40067045 - 40067118
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagt-aaaggttgaacatattataagttagaggacccata 286  Q
    ||||||||||||||||||   | |||||||||||| || ||| |||||||| ||||||||| ||||||| ||||    
T  40067045 caagtgtgagttatatgttctacatcggataaaagtgtaaaaagttgaacacattataagtaagaggacacata 40067118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 45496820 - 45496881
Alignment:
Q  227 tatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| || |||||||||||  ||||||||||||||  |||||||| |||||||| |||||    
T  45496820 tatgtcccacatcggataaaatcgtaaaggttgaacaccttataagtaagaggacctataaa 45496881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 54936190 - 54936272
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||||||||||||||    | || ||| ||||||| |||||||||||||||  || ||||| ||||||||||||||    
T  54936190 tgttgttgtgtacaagtgtgagttat----cccacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaa 54936272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 11348494 - 11348410
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccata 286  Q
    ||||| ||||||||| ||||||||||||||   | ||| ||||||| |||  ||||||||||  |||||||| |||||| |||||    
T  11348494 tgttgttgtgtgcaattgtgagttatatgttctacatcagataaaatagtggaggttgaacactttataagtgagaggatccata 11348410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 39793020 - 39792956
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataag 272  Q
    ||||| ||||||||||||||||||| || ||| |||| || |||||| ||||||||  |||||||    
T  39793020 tgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataag 39792956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 5747 - 5853
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| |||||||    
T  5747 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 5846  T
Q  282 ccataaa 288  Q
    |||||||    
T  5847 ccataaa 5853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 5386 - 5472
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||||||||||  | ||||||||||| |||||||||||||||  |||||||| ||||| ||||||||    
T  5386 tgttgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagggcccataaa 5472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 7553995 - 7554101
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||     
T  7553995 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggat 7554094  T
Q  282 ccataaa 288  Q
    |||||||    
T  7554095 ccataaa 7554101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 30255309 - 30255412
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||||||||||||||  |||||||| ||||| |    
T  30255309 gactcacacttgagggggagtgttgttgtgtgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagggc 30255408  T
Q  282 ccat 285  Q
    ||||    
T  30255409 ccat 30255412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 191 - 288
Target Start/End: Complemental strand, 22566841 - 22566744
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||| ||| ||||||||||||| ||||||| || |||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  22566841 ttgagggggagtgttgttgtatgcaagtgtgagtaatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 22566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 183 - 288
Target Start/End: Original strand, 30244241 - 30244346
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacc 282  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||| |  |||||||| |||||||     
T  30244241 actcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagaggact 30244340  T
Q  283 cataaa 288  Q
    ||||||    
T  30244341 cataaa 30244346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 30244671 - 30244771
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || || ||||||||||||||||||||||||  |||||| | |||||||    
T  30244671 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataaataagaggac 30244770  T
Q  282 c 282  Q
    |    
T  30244771 c 30244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 37533196 - 37533092
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||| || || |||||||| |||||||||||||||  |||||||| |||||||    
T  37533196 gactcacgcttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggac 37533099  T
Q  282 ccataaa 288  Q
    |||||||    
T  37533098 ccataaa 37533092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 7517570 - 7517656
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  7517570 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 7517656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 30245055 - 30245153
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||| ||||| ||||||||||||||||||  || |||||||||||||||||||||||||||  |||||||| ||| ||||||||||    
T  30245055 cttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagacgacccataaa 30245153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 200 - 288
Target Start/End: Complemental strand, 1085786 - 1085698
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  1085786 agtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaa 1085698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 190 - 285
Target Start/End: Original strand, 30245472 - 30245567
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccat 285  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||  |||||||| ||||| |||||    
T  30245472 cttgagggggactgttgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttgaacaccttataagtaagagggcccat 30245567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 40094942 - 40094856
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  40094942 tgttgttgtgtgcaagtgtgagttatatgtctcacatcgaataaaagagtaaaggttcaacaccttataagtaagaggacccataaa 40094856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 47129084 - 47129171
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| ||||  |||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||| ||||||||||||||    
T  47129084 gtgttgttgtgcacaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagaggacccataaa 47129171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 36109084 - 36109007
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagagga 280  Q
    |||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  |||||||| ||||||    
T  36109084 gttgttgtgtgcaagtgtgagttatatttctcacatcggataaaagagtaaaggttgaacaccttataagtaagagga 36109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 45434619 - 45434712
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||| ||||| ||||||| ||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  45434619 gggggggtgttgttgtgtacaagtgtaagttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagaggacccataaa 45434712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 16569186 - 16569272
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||| |||||||||||||||||||||||| |||||||| || ||||||||||||| |  |||||||| ||||||||||||||    
T  16569186 tgttgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaa 16569272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 16596476 - 16596390
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||| |||||||||||||||||||||||| |||||||| || ||||||||||||| |  |||||||| ||||||||||||||    
T  16596476 tgttgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaa 16596390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 22567206 - 22567121
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||| ||||||||||||| ||||||| || |||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  22567206 tgttgttgtatgcaagtgtgagtaatatgtc-cacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 22567121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 24177425 - 24177511
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||  |||||||| || |||||||||||    
T  24177425 tgttgttgtgtgcaagtatgagttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagtaagcggacccataaa 24177511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 36939893 - 36939815
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||  |||||||| ||||||||||||||    
T  36939893 tgtgcaagtgtgagttatatgtcccaaatcgtataaaatagtaaaagttgaacaccttataagtaagaggacccataaa 36939815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 41910762 - 41910676
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||| |||||||||||||||||| || ||||||||||||||||||||||||| |  |||||| | ||||||||||||||    
T  41910762 tgttgttgtgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagaggacccataaa 41910676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 28301705 - 28301625
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||||||| |||||||| || |||||| | ||||||  |||||||| ||||||||||||||    
T  28301705 tgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaagctgaacaccttataagtaagaggacccataaa 28301625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 36622956 - 36623036
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||| ||||||||  ||||| |||||||    
T  36622956 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataagtaggaggatccataaa 36623036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 40230453 - 40230373
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||| ||||||||||| || |||| |||||| |||||| ||||||||| |||||||| ||||||||||||||    
T  40230453 tgtgtgcaagtgtaagttatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagaggacccataaa 40230373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 14681482 - 14681586
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||| ||||||||||| || ||| ||||||| |||||||||||||||  || ||||| ||||| |    
T  14681482 gactcacacttgagggggagtgttg--gtttgcaagtgtaagttatatgtcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagagggc 14681579  T
Q  282 ccataaa 288  Q
    |||||||    
T  14681580 ccataaa 14681586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 23545 - 23459
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||| ||||||||||||||  || |||||||| || |||||||||||||||  |||||||| ||||||||||||||    
T  23545 tgttgttgtgtgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaa 23459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 288
Target Start/End: Complemental strand, 1085436 - 1085330
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgag-ttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    |||||| ||||| ||||||||||| |||||||||||||||| || |||||| || ||||||||||| |||||| ||||||||  | |||||| |||| ||    
T  1085436 actcacacttgaaggggagtgttgttgtgtgcaagtgtgagtttttatgtcccatatcggataaaatagtaaaagttgaacaactcataagtaagagaac 1085337  T
Q  282 ccataaa 288  Q
    |||||||    
T  1085336 ccataaa 1085330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 6054562 - 6054636
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||| |||||||||||||| ||||||||||| |||||| ||||||||  |||||||| ||||||||||||||    
T  6054562 caagtgttagttatatgtctcacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaa 6054636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 34218202 - 34218116
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||| |||||||||||||||||| ||||||||||| |||||| ||||||||  |||||||| ||||||| ||||||    
T  34218202 tgttgttgtgtacaaatgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaa 34218116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 8128603 - 8128523
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || |||||||| || | |||||||||||||  ||||| || ||||||||||||||    
T  8128603 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaaataaaggttgaacaccttatatgtaagaggacccataaa 8128523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 29157565 - 29157641
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || | ||||||||| |||||||||||||||  |||||||| ||| ||||||||||    
T  29157565 tgcaagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagtaagacgacccataaa 29157641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 36534952 - 36534866
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||| | ||||||||| ||  |||||||||| |||| ||||||||||  |||||||| ||||||||||||||    
T  36534952 tgttgttgtgtgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaa 36534866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 43241485 - 43241571
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||||||||  || ||||||||||| | |||||||||||||  |||||||| | ||||| ||||||    
T  43241485 tgttgttgtgtgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataagtaaaaggactcataaa 43241571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 45433231 - 45433317
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| |||||||||||||||||   || |||||||||||||||||||||||||||  |||||||| |||| || ||||||    
T  45433231 tgttgttgtgtacaagtgtgagttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaa 45433317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 11845198 - 11845267
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||  || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  11845198 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 11845267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 24838870 - 24838799
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagt 273  Q
    ||||| |||||  |||||| |||||||||||||| |||| ||||||||||||||||||||||  ||||||||    
T  24838870 tgttgttgtgtataagtgtaagttatatgtctcacatcgaataaaagagtaaaggttgaacaccttataagt 24838799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 118469 - 118383
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||| ||||||||||| || ||| |||| || |||||||||||||||  | |||||| |||||| |||||||    
T  118469 tgttgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaagaggatccataaa 118383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 40094556 - 40094502
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaac 262  Q
    |||||||||||||||||||||||||  | ||| ||||||||||||||||||||||    
T  40094556 tgtgtgcaagtgtgagttatatgtccaacatcagataaaagagtaaaggttgaac 40094502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 45754706 - 45754791
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||| ||||||||  |||||||| ||| ||| ||||||    
T  45754706 tgttgttgtgtacaagtgtgagttatatgtc-cacatcggataaaatagtaaatgttgaacaccttataagtaagatgactcataaa 45754791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 9901648 - 9901719
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||| ||||| | ||||||| |||||||    
T  9901648 aagtgtgagttatatgtc-cacatcggataaaacagtaaaggttgaacatcttatacg-tagaggatccataaa 9901719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 36967397 - 36967344
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaag 255  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  36967397 tgttgttgtgtacaagtgtgagttatatgtctcacatcggataaaaaagtaaag 36967344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 19122740 - 19122807
Alignment:
Q  220 tgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||| ||||||    
T  19122740 tgagttatatgtc-cacatcggataaaatagtaaaggttgaacaccttataagtaagaggactcataaa 19122807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 44361616 - 44361570
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  44361616 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaaca 44361570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 37533519 - 37533446
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||   | || | |||||| |||||||||||||||  |||||||| ||||||||||||||    
T  37533519 aagtgtgagttatatgttctacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 37533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 272
Target Start/End: Original strand, 41854631 - 41854694
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataag 272  Q
    ||||||||||| ||||||||||||| || ||| | |||||||||||||||||||||  |||||||    
T  41854631 tgtgtgcaagtatgagttatatgtcccacatcag-taaaagagtaaaggttgaacaccttataag 41854694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 30032572 - 30032643
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||| || |||| ||||||||||||  ||||||||  |||||||| |||| | |||||||    
T  30032572 gtgtgagttatatgtcccacatcgaataaaagagtaagtgttgaacaccttataagtaagagtatccataaa 30032643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 20599317 - 20599383
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    |||||||||||||||||| || ||||||||||| |||||||| | ||||  |||||| | |||||||    
T  20599317 aagtgtgagttatatgtcccatatcggataaaaaagtaaaggataaacactttataaataagaggac 20599383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 37533259 - 37533213
Alignment:
Q  133 gcagcaacggctatacatgcaaagtaaaaagcttccactctagggga 179  Q
    ||||||||||| |||||  ||||||||||||||||| ||||||||||    
T  37533259 gcagcaacggcgatacagacaaagtaaaaagcttccgctctagggga 37533213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 48243262 - 48243218
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatat 229  Q
    |||| ||||||||||||||||| ||||| ||||| ||||||||||    
T  48243262 tcacacttgagggggagtgttgttgtgtacaagtctgagttatat 48243218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 26074970 - 26074864
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| | |||||||  ||||||    
T  26074970 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacaatataagtaggaggac 26074871  T
Q  282 ccataaa 288  Q
    |||||||    
T  26074870 ccataaa 26074864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 26074582 - 26074688
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||||||  || |||||||||||||||||||||||||||  |||||||| |||||||    
T  26074582 gactcacacttgagggggagtgtttttgtgtacaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtaagaggac 26074681  T
Q  282 ccataaa 288  Q
    |||||||    
T  26074682 ccataaa 26074688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 13415947 - 13415842
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||| |||| || ||||||||||||||||||||||||| || ||||||||||  |||||||||||||||  |||||||| |||||||    
T  13415947 gactcacacttgagggg-agtgctgttgtgtgcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagaggac 13415849  T
Q  282 ccataaa 288  Q
    |||||||    
T  13415848 ccataaa 13415842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 15370089 - 15370175
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||||||||| || |||| |||||| |||||||||||||||| |||||||| ||||||||||||||    
T  15370089 tgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaa 15370175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 26075330 - 26075244
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  26075330 tgttgttgtgtacaagtgtgatttatatgtctcacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 26075244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 6224186 - 6224272
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  6224186 tgttgttgtgtacaagtgtgagttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 6224272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 12662820 - 12662734
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||| |||  |||||||||    
T  12662820 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaa 12662734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 36492385 - 36492299
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||| |||||||| |||||    
T  36492385 tgttgttgtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccaataaa 36492299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 40296483 - 40296397
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| || ||||||||||||  |||||||| ||||||||||||||    
T  40296483 tgttggtgtgtgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaa 40296397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 3295204 - 3295097
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtg--caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagagg 279  Q
    ||||||| ||||||||||||||||| ||||||  ||||||||||| ||||||| || ||||||||||| |||||||||||||||  |||||||| ||| |    
T  3295204 gactcacacttgagggggagtgttgttgtgtgtgcaagtgtgagt-atatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaag 3295106  T
Q  280 acccataaa 288  Q
    |||||||||    
T  3295105 acccataaa 3295097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 285
Target Start/End: Complemental strand, 26074330 - 26074231
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacc 282  Q
    |||||| |||||||||||||||||   ||||||||||||||||||||||| || ||||||||||| |||||||||||||||  | ||| || ||||||||    
T  26074330 actcacacttgagggggagtgttg---tgtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaacacctcatatgtaagaggacc 26074234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 41632778 - 41632858
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||| |||||||||||||| |||||||| || |||||||||||||||  |||||||| ||||||||||||||    
T  41632778 tgtgtgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaa 41632858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 299479 - 299565
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||| |||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||| ||||||||||    
T  299479 tgttgttgtgcgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaa 299565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 41170640 - 41170710
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||| |||||||| ||||||||||||||    
T  41170640 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaa 41170710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 35150003 - 35150082
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || ||||||||||||||| |||||||||||  |||||||| ||| ||||||||||    
T  35150003 tgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaaga-gacccataaa 35150082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 6500795 - 6500898
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||| |||||||||||  || ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||| | | |||||    
T  6500795 gactcacacttgatggggagtgttg--gtttgcaagtgtgagttatatgtc-cacatcggataaaatagtaaaggttgaacaccttataaataaaaggac 6500891  T
Q  282 ccataaa 288  Q
    |||||||    
T  6500892 ccataaa 6500898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 18603276 - 18603202
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||| || ||| ||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  18603276 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 18603202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 35914839 - 35914925
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||  |||| ||||||||||||| || |||||||||||||||||||||||||||| |||||||| ||| ||||| ||||    
T  35914839 tgttgttgtgtataagtatgagttatatgtcacacatcggataaaagagtaaaggttgaacattttataagtaagaagacccgtaaa 35914925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 288
Target Start/End: Original strand, 624171 - 624272
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggaccca 284  Q
    |||| ||||||||| |||||||  || ||||||||||||||||||||| || || | |||||| |||||||||||||||  |||||||| ||| ||||||    
T  624171 tcacacttgaggggaagtgttg--gtttgcaagtgtgagttatatgtcccacattgtataaaatagtaaaggttgaacacgttataagtaagatgaccca 624268  T
Q  285 taaa 288  Q
    ||||    
T  624269 taaa 624272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 1028679 - 1028599
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||| || |||||||| || |||||||| ||||||  |||||||| ||||||||||||||    
T  1028679 tgtgtacaagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaa 1028599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 9498812 - 9498736
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||| ||| |||| || |||||||||||||||  |||||||| ||||||||||||||    
T  9498812 tgcaaatgtgagttatatgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagaggacccataaa 9498736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 27502194 - 27502118
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || || |||||||| |||||||||| ||||  |||||||| ||||||||||||||    
T  27502194 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagaggacccataaa 27502118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 32487394 - 32487469
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||   ||||||| ||||||||||||||    
T  32487394 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca-cctataagtaagaggacccataaa 32487469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 282
Target Start/End: Original strand, 6500451 - 6500520
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacc 282  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||    
T  6500451 tgcaagtgtgagttatatgtc-cacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 6500520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 25327925 - 25328011
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||  ||||||||||||||||||  | ||||||||||| |||||| ||||||||  |||||||| ||||||||||||||    
T  25327925 tgttgttgtgtctaagtgtgagttatatgtcctacatcggataaaacagtaaaagttgaacaccttataagtaagaggacccataaa 25328011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 31509594 - 31509699
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||| |||  ||| |||||||||||||||||||||||||||| |||||||| || |||  ||||||| ||  |||||||| |||||||    
T  31509594 gactcacacttgagggagaga-ttgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggac 31509692  T
Q  282 ccataaa 288  Q
     ||||||    
T  31509693 tcataaa 31509699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 3295505 - 3295426
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| |||||||||| ||||||  || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  3295505 tgtgtggaagtgtgagt-atatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 3295426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 36568729 - 36568649
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || |||||||| || |||||| ||||||||  |||||||| ||| ||||| ||||    
T  36568729 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacccgtaaa 36568649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 623818 - 623869
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  623818 tgcaagtgtgagttatatgtctcacatcggatataatagtaaaggttgaaca 623869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 11417143 - 11417059
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||  ||||||||||  || ||||||||||| |||||||||||||||  |||||||| |||||| |||||||    
T  11417143 tgttgttgtgtgcaagtg--agttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaa 11417059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 35168006 - 35167920
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||||| |||||||| | ||||| ||| |||||||||||||||||||||||  ||||||||  || ||||||||||    
T  35168006 tgttgttgtgtacaagtatgagttatgtatctcacatcagataaaagagtaaaggttgaacaccttataagtaggatgacccataaa 35167920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 39309680 - 39309754
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacc 282  Q
    ||||| ||||| ||||||||||||| || |||||||||||| ||||| |||||||| ||||||| | ||||||||    
T  39309680 tgtgtacaagtatgagttatatgtcccacatcggataaaagggtaaatgttgaacacattataaataagaggacc 39309754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 42405764 - 42405678
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| |||||||||||||||||||  | ||||||||||| |||||||||||||||  ||| |||| | ||||| ||||||    
T  42405764 tgttgttgtgtacaagtgtgagttatatgtccaacatcggataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaa 42405678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 5723949 - 5723876
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccat 285  Q
    ||||||||||||||||||||| || ||||||||||| | |||| |||||||| |||||| || |||| ||||||    
T  5723949 tgcaagtgtgagttatatgtcccacatcggataaaataataaaagttgaacacattatatgtaagagaacccat 5723876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 35150736 - 35150789
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaa 254  Q
    |||||| ||||||||||||||||||||||||| || |||| |||||||||||||    
T  35150736 gtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 35151027 - 35151080
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaa 254  Q
    |||||| ||||||||||||||||||||||||| || |||| |||||||||||||    
T  35151027 gtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35151080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 38427553 - 38427620
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccat 285  Q
    |||||||||||||||| || || ||||| || |||||||||||||||| ||||||| ||||||||||||    
T  38427553 gtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacatcttataag-tagaggacccat 38427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 13785794 - 13785732
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaa 247  Q
    |||||||  ||||||||||||||||   |||| |||||||||||||||||| ||||||||||||||    
T  13785794 gactcacatttgagggggagtgttg---tgtggaagtgtgagttatatgtcccaaatcggataaaa 13785732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 15370384 - 15370426
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagt 224  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  15370384 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagt 15370426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 26074320 - 26074394
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||| || ||| |||| || | ||||| |||||||  |||||||| ||||||||||||||    
T  26074320 caagtgtgagttatatgtcccacatcagatagaaaactaaagattgaacaccttataagtaagaggacccataaa 26074394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 7768852 - 7768925
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataa 287  Q
    |||||||||||||||| ||  | ||||||||||| | |||||||||||||  |||||||| | |||||||||||    
T  7768852 caagtgtgagttatatatcctacatcggataaaataataaaggttgaacaccttataagtaaaaggacccataa 7768925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 29549413 - 29549337
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||  || ||| ||||||| |||||||| ||||||   ||||||| ||| ||||||||||    
T  29549413 tgcaagtgtgagttatatgttccatatcagataaaatagtaaaggatgaacaccatataagtaagaagacccataaa 29549337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 24489389 - 24489311
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| |||||||||||||||||   ||| ||||||||||||||||||| || ||| |||| || || ||||||| ||||    
T  24489389 gactcacacttgagggggagtgttg---tgttcaagtgtgagttatatgtcccacatcagatagaaaagaaaaggttaaaca 24489311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 288
Target Start/End: Complemental strand, 36522413 - 36522319
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||   | || ||||||||||||||||||||| || ||||| || | |  | ||||||||| |||||||| |||||||| |||||    
T  36522413 ttgagggggagtgttg---tatgaaagtgtgagttatatgtctcacattggatagaaaaatggaagttgaacattttataagtgagaggaccaataaa 36522319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 300955 - 301025
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagag 278  Q
    ||||| |||||||| |||||||||| || ||| ||||||| ||||||||||||| |  |||||||| ||||    
T  300955 tgtgtacaagtgtgggttatatgtcccacatcagataaaacagtaaaggttgaataccttataagtaagag 301025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 34753193 - 34753107
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||| ||| ||||||||||| || || ||||| || |||||| ||||||||  |||||||| ||| ||||||||||    
T  34753193 tgttgttgtgtacaaatgtaagttatatgtcccacattggatagaaaagtaaaagttgaacaccttataagtaagaagacccataaa 34753107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 41635359 - 41635273
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||  |||| |||||||||||| ||  ||| |||||||||||||| ||||||||  |||||| | |||||| |||||||    
T  41635359 tgttgttgtgtataagtatgagttatatgtttcccatcagataaaagagtaaatgttgaacaccttataaataagaggatccataaa 41635273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 42524719 - 42524792
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||| |||||||||||| |||||||| || |||||| ||||||||| |||| | | ||||||| ||||||    
T  42524719 caagtgtgaattatatgtctcacatcggatagaaaagtaaa-gttgaacatcttatgaataagaggactcataaa 42524792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 795249 - 795196
Alignment:
Q  111 caagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagc 164  Q
    |||||| ||||||||| |||||||||||||||  |||||  |||||||||||||    
T  795249 caagcagcaagtggctccttgtgcagcaacggtgatacagacaaagtaaaaagc 795196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 9498556 - 9498507
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||| ||||||||| ||||||||| |||||  |||||||||||||||    
T  9498556 acaagcagcaagtggctccttgtgcaggaacggtgatacatgcaaagtaa 9498507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 33747783 - 33747847
Alignment:
Q  224 ttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||| || ||||||||||| |||||||||| || |  |||||||| |||||| |||||||    
T  33747783 ttatatgtcccacatcggataaaatagtaaaggttaaatactttataagtaagaggatccataaa 33747847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 36522081 - 36521978
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||| ||||||||   || |||||||||||||||||||| || ||| |||| || |||  ||||||||||   | ||| | |||||||    
T  36522081 gactcacacttgagggagagtgttg---tgcgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttgaacactctttaaatgagaggac 36521985  T
Q  282 ccataaa 288  Q
    |||||||    
T  36521984 ccataaa 36521978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 34364895 - 34365001
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| | |||||||||||||  |||||||| |||||||    
T  34364895 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaataataaaggttgaacaccttataagtaagaggac 34364994  T
Q  282 ccataaa 288  Q
    |||||||    
T  34364995 ccataaa 34365001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 44290644 - 44290540
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||| |||||||    
T  44290644 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggac 44290547  T
Q  282 ccataaa 288  Q
    |||||||    
T  44290546 ccataaa 44290540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 26661710 - 26661604
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||| ||||||||||||| ||||| ||||||||||||||||||| || ||||| |||||||||||||||||||||  |||||||| |||||||    
T  26661710 gactcacacttaagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggac 26661611  T
Q  282 ccataaa 288  Q
    |||||||    
T  26661610 ccataaa 26661604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 22077680 - 22077577
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||   |||||||||||||||||||||||||| |||||||| || |||||||||||||||  |||||||| |||||||    
T  22077680 gactcacacttgagggggagtgttg---tgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggac 22077584  T
Q  282 ccataaa 288  Q
    |||||||    
T  22077583 ccataaa 22077577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 3537333 - 3537229
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| |||||||    
T  3537333 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 3537236  T
Q  282 ccataaa 288  Q
    |||||||    
T  3537235 ccataaa 3537229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 41157345 - 41157451
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||| ||||||||| ||| ||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||  |||||||| |||||||    
T  41157345 gactcacacttaagggggagtattgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagaggac 41157444  T
Q  282 ccataaa 288  Q
    |||||||    
T  41157445 ccataaa 41157451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 41184593 - 41184507
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  41184593 tgttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaa 41184507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 37556081 - 37556182
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggat-aaaagagtaaaggttgaacatattataagttagagga 280  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||| |||| |||||||||||||||| |||||||| ||||||    
T  37556081 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaagagga 37556180  T
Q  281 cc 282  Q
    ||    
T  37556181 cc 37556182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 288
Target Start/End: Original strand, 11977251 - 11977356
Alignment:
Q  183 actcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacc 282  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||| |||||| ||||||||  |||||||| |||| ||     
T  11977251 actcacacttgagggggagtgttgctgtgtacaagtgtgagttatatgtcccacatcgggtaaaacagtaaatgttgaacaccttataagtaagagcact 11977350  T
Q  283 cataaa 288  Q
    ||||||    
T  11977351 cataaa 11977356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 17294573 - 17294653
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  17294573 tgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaa 17294653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 34364496 - 34364575
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagagga 280  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||| ||||||    
T  34364496 gtgttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagga 34364575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 41156981 - 41157067
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||| ||||||||| || | |||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  41156981 tgttgttgtgtgcaagtgtgaattatatgtcccataacggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 41157067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 50052178 - 50052105
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||||| |||||||| ||||||||||||||    
T  50052178 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaa 50052105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 22077990 - 22077910
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||| | |||||||||| || | |||||||||||||| |||||||| ||||||||||||||    
T  22077990 tgtgtgcaagtgtgagttatatgttttaaatcggatagaaaaataaaggttgaacatcttataagtaagaggacccataaa 22077910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 24600476 - 24600396
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || |||||||| || ||||||||||||||||||||||||| |||| || ||||||    
T  24600476 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaactcataaa 24600396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 44290983 - 44290907
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  44290983 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 44290907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 45084378 - 45084457
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataa 287  Q
    |||||||||||||||||||||| || || ||||||||||| |||||||||||||||  |||||||| |||||||||||||    
T  45084378 tgtgtgcaagtgtgagttatatctcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataa 45084457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 21378209 - 21378123
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||| ||||||||||| || |||||||| || ||||||||||||| || |||||||| ||||||||||||||    
T  21378209 tgttgttgtgtgcaagtgtcagttatatgtcccagatcggatagaacagtaaaggttgaatatcttataagtaagaggacccataaa 21378123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 288
Target Start/End: Original strand, 41142370 - 41142448
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| | ||||||||||||    
T  41142370 tgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaa 41142448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 31767329 - 31767246
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccat 285  Q
    ||||| |||||||||||||| |||||||||  || ||||||||||| |||||||||||||||  |||||||| |||||||||||    
T  31767329 tgttgttgtgtgcaagtgtgggttatatgttccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccat 31767246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 48588674 - 48588570
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || |||||||||||||| ||||||  | ||||||||||| |||||||||||||||  |||||||| ||| |||    
T  48588674 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttctatgtccgacatcggataaaatagtaaaggttgaacaccttataagtaagaagac 48588577  T
Q  282 ccataaa 288  Q
    || ||||    
T  48588576 ccgtaaa 48588570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 5528902 - 5528836
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||| | ||||||| ||||||    
T  5528902 agttatatgtctcacatcggataaaagagtaaaggttgaacatcttataaataagaggactcataaa 5528836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 26662066 - 26661980
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| |||||||||||||||| || || ||| |||||||||||||||||||||||  |||||||| ||| ||||||||||    
T  26662066 tgttgttgtgtacaagtgtgagttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaa 26661980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 37850768 - 37850682
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||||||||| || |||| |||||| |||| ||||||||||  |||||||| |||| |||||||||    
T  37850768 tgttgttgtgtgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaacccataaa 37850682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 38804511 - 38804437
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||| ||| || |||| |||||||||||||||||||||| ||||||||| |||||| |||||||    
T  38804511 caagtgtgagttatacgtcccacatcgaataaaagagtaaaggttgaacacattataagtaagaggatccataaa 38804437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 66634 - 66554
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||  || |||||||| || |||||||||||||||  |||||||| |||||| |||||||    
T  66634 tgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaagaggatccataaa 66554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 32594874 - 32594798
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||  | ||| ||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  32594874 tgcaagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 32594798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 213 - 288
Target Start/End: Original strand, 3550721 - 3550796
Alignment:
Q  213 gcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||| || ||| ||||||| |||||||||||||||  |||||||| ||||||| ||||||    
T  3550721 gcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaa 3550796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 34649440 - 34649499
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagt 273  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||  ||||||||    
T  34649440 caagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagt 34649499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 66274 - 66169
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttat-atgtctcaaatcggataaaagagtaaaggtt-gaacatattataagttagagg 279  Q
    ||||||| ||||||||| |||||||   ||||||||||||||| || |||||||| |||||||| || |||||||||| |||||  |||||||| |||||    
T  66274 gactcacacttgaggggaagtgttg---tgtgcaagtgtgagtaatcatgtctcacatcggatagaaaagtaaaggtttgaacaccttataagtaagagg 66178  T
Q  280 acccataaa 288  Q
    |||||||||    
T  66177 acccataaa 66169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 29798189 - 29798275
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||| |||||||||||||||||||||  | || |||||||| |||||||||||||||  |||||||| ||||||| ||||||    
T  29798189 tgttgttgtatgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagaggactcataaa 29798275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 35154207 - 35154150
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttg 259  Q
    ||||| ||||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  35154207 tgttgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttg 35154150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 40082398 - 40082475
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagagga 280  Q
    |||| |||| ||||||||||||||||||||  | ||||||||||| |||||||||||||||  |||||||| ||||||    
T  40082398 gttgttgtgcgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagga 40082475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 3875493 - 3875413
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||| || ||||||||||| || ||||||||||| ||||||||||| |||  |||||||| ||||||| ||||||    
T  3875493 tgtgtgcaagagtcagttatatgtcacacatcggataaaaaagtaaaggttgtacaccttataagtaagaggactcataaa 3875413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 5320123 - 5320047
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||  || |||||||| || |||||| ||||||||  |||||||| ||||||||||||||    
T  5320123 tgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagaggacccataaa 5320047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 30630823 - 30630720
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||| |||||||||    ||||||||||||| |||||||||||| ||||||||||| | ||||||||  |||  |||||||| |||| ||    
T  30630823 gactcacacttgagagggagtgtta---tgtgcaagtgtgatttatatgtctcacatcggataaaaaattaaaggtttgacactttataagtaagagaac 30630727  T
Q  282 ccataaa 288  Q
    |||||||    
T  30630726 ccataaa 30630720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 41759483 - 41759559
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| |||||| ||||||||  |||||||| ||| || |||||||    
T  41759483 tgcaagtgtgagttatatgtcacacatcggataaaatagtaaaagttgaacaccttataagtaagatgatccataaa 41759559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 39066369 - 39066282
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| |||||||||||||||||||||| |  || |||||||| || |||||||||||||||  |||||| | ||| ||||||||||    
T  39066369 gtgttgttgtgtgcaagtgtgagttatatattccacatcggatagaaaagtaaaggttgaacaccttataactaagatgacccataaa 39066282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 9955911 - 9955981
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaaga-gtaaaggttgaacatattataagttagaggacccat 285  Q
    ||||||||||||||||| || ||| ||||||| | |||||||||||||| ||||||||| |||||||||||    
T  9955911 agtgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagaggacccat 9955981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 26661797 - 26661748
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||    
T  26661797 acaagcaacaagtggctccttgtgcagcaacgacgatacatgcaaagtaa 26661748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 44685452 - 44685533
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaagg-ttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || |||||||| || |||||||| ||||| |  |||||||| |||||||| |||||    
T  44685452 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaa 44685533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 1187526 - 1187446
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||| |||||||||||| |||| ||| || |||  ||||| ||||| |||||||| ||| ||||||||||    
T  1187526 tgtgtgcaagtgtgaattatatgtctcacatcgaatataaaagtggaggttaaacattttataagtgagaagacccataaa 1187446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 3537752 - 3537681
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||| ||||||||||| || ||||||||||| |||||||||||||||  |||| ||| |||||||| |||||    
T  3537752 gtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttatgagtaagaggacctataaa 3537681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 37555733 - 37555800
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacc 282  Q
    |||||||||||||| ||| || ||||||||||| ||| ||||||||| | ||||||||| ||||||||    
T  37555733 aagtgtgagttataagtcccacatcggataaaatagtgaaggttgaatacattataagtaagaggacc 37555800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 4878799 - 4878869
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagag 278  Q
    ||||||||| ||||||||||||||  || ||||||||||| ||| ||| |||||||| |||||||| ||||    
T  4878799 tgtgtgcaattgtgagttatatgttccacatcggataaaatagtgaagcttgaacattttataagtgagag 4878869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 5575110 - 5575180
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||| ||  ||||||| ||||||||||||||||||  |||||||| |||||||| |||||    
T  5575110 tgtgaattatatgtcccacgtcggatagaagagtaaaggttgaacaccttataagtaagaggacctataaa 5575180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 50469256 - 50469188
Alignment:
Q  192 tgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||||   |||||||||||||||||||||||  | ||| ||||| | |||||||||||||||    
T  50469256 tgagggggagtgttg---tgtgcaagtgtgagttatatgtcctacatcagataataaagtaaaggttgaaca 50469188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 1188750 - 1188670
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||  || |||||||| || |||  |||||||| || |||||||| ||| ||| ||||||    
T  1188750 tgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgagaagactcataaa 1188670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 14318875 - 14318943
Alignment:
Q  220 tgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||  ||  |||||||||| |||||||||||||||  |||||||| ||| ||||||||||    
T  14318875 tgagttatatgttccacgtcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaa 14318943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 22077299 - 22077248
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    |||||||||||||||||   ||||||||||||||||||||||| || ||||||||    
T  22077299 cttgagggggagtgttg---tgtgcaagtgtgagttatatgtcccacatcggata 22077248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 22793274 - 22793354
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||| |||||||||||||||||||| || |||| ||| || |||| |||||||| |  |||||||| |||||| |||||||    
T  22793274 tgtgagcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagaggatccataaa 22793354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 45494137 - 45494085
Alignment:
Q  212 tgcaagtgtgagtt-atatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||| ||||||| || ||||||||||| |||||||||||||||    
T  45494137 tgcaagtgtgagtttatatgtcccacatcggataaaatagtaaaggttgaaca 45494085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 50051837 - 50051777
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||| || ||||||||    
T  50051837 gactcacacttgagggggaatgttg--gtttgcaagtgtgagttatatgtcccacatcggata 50051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 4956218 - 4956267
Alignment:
Q  239 cggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| || |||||||||||||||| |||||||| |||||| |||||||    
T  4956218 cggatagaaaagtaaaggttgaacatcttataagtaagaggatccataaa 4956267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 22077245 - 22077192
Alignment:
Q  235 aaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||| || ||||||||||||| |  |||||||| ||||||||||||||    
T  22077245 aaatcggatagaaaagtaaaggttgaataccttataagtaagaggacccataaa 22077192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 24132143 - 24132067
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||| |  |||||||| || |||||||||||||||  |||||| | || ||| |||||||    
T  24132143 tgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaacaccttataaataaggggatccataaa 24132067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 15773162 - 15773267
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || |||| ||||||||||||| ||||||||| |||||||| |||||||    
T  15773162 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagaggac 15773261  T
Q  282 ccataa 287  Q
     |||||    
T  15773262 tcataa 15773267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 110 - 288
Target Start/End: Original strand, 4823541 - 4823731
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccactctaggggagc--------------gactcacgcttgag 195  Q
    ||||||||||||||||| ||||||||| || ||| |||||||||||||||||||||||| ||||||||||||              ||||||| |||||     
T  4823541 acaagcaacaagtggctccttgtgcaggaatggcgatacatgcaaagtaaaaagcttccgctctaggggagcacgttaaagtgatggactcacacttgaa 4823640  T
Q  196 ggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||  || ||||||||||||||||| |||||| ||||||||||| |||||| ||| ||||  ||||||||  |||||||||||||    
T  4823641 ggggagtgttg--gtttgcaagtgtgagttataagtctcacatcggataaaatagtaaaagttaaacaccttataagtaggaggacccataaa 4823731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 54018004 - 54017898
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||||  | |||||||||||||||||||||||||||  |||||||| |||||||    
T  54018004 gactcacacttgagggggagtattgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggac 54017905  T
Q  282 ccataaa 288  Q
     ||||||    
T  54017904 tcataaa 54017898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 31190007 - 31190091
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccata 286  Q
    ||||| ||||||||||||||||| ||||||| || |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  31190007 tgttgttgtgtgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggacccata 31190091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 15772851 - 15772930
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||| || |||||||||||||||||| ||||||||  |||||||| ||||||||||||||    
T  15772851 gtgtgcaagtgtgagttatatgtcccatatcggataaaagagtaaatgttgaacaccttataagtaagaggacccataaa 15772930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 22304541 - 22304645
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || |||||||||||| |||||||| || ||||||||||| ||||||||||||| |  |||||||| |||||||    
T  22304541 gactcacacttgagggggagtgttg--gtttgcaagtgtgagctatatgtcccacatcggataaaatagtaaaggttgaataccttataagtaagaggac 22304638  T
Q  282 ccataaa 288  Q
    |||||||    
T  22304639 ccataaa 22304645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 25739593 - 25739507
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| |||||| |||||||||  ||||||| ||||||||||||||    
T  25739593 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaa 25739507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 29645070 - 29644984
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||| ||||||||||| || |||||||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  29645070 tgttgttgtgtgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaa 29644984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 37990827 - 37990721
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    |||||||  |||||||||||||||| ||||| ||||||||||||||||||  || ||||||||||| |||||| ||||||||  |||||||| |||||||    
T  37990827 gactcacagttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggac 37990728  T
Q  282 ccataaa 288  Q
     ||||||    
T  37990727 tcataaa 37990721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 42342556 - 42342470
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||||||||| || ||| |||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  42342556 tgttgttgtgtgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaa 42342470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 29644756 - 29644663
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| ||||  ||||||||||||||||||||||||| || ||||||| |||||||||||||||||||  |||||||| |||| |||||||||    
T  29644756 gggggaatgtttttgtgtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaacccataaa 29644663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 8327900 - 8327980
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||| |||| || |||||||| |||| |||||||||    
T  8327900 tgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaacccataaa 8327980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 35946518 - 35946598
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  35946518 tgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaa 35946598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 51886561 - 51886637
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||||||  ||||||| ||||||||||||||    
T  51886561 tgcaagtgtgagttatatgtctcacatcgaataaaatagtaaaggttgaacatcatataagtaagaggacccataaa 51886637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 25755383 - 25755470
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| |  |||||||| ||||||| ||||||    
T  25755383 gtgttgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaa 25755470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 32462747 - 32462640
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagt-aaaggttgaacatattataagttagagga 280  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || |||| || ||||||| ||||||||||||  |||||||| ||| ||    
T  32462747 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcgaatgaaagagtaaaaggttgaacaccttataagtaagatga 32462648  T
Q  281 cccataaa 288  Q
     |||||||    
T  32462647 tccataaa 32462640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 37991146 - 37991059
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| ||||| |||||||||||||||||||||| || |||||||| |||||||||||||||  |||||||| |||||||| |||||    
T  37991146 gtgttgttgtgtacaagtgtgagttatatgtctcacattggataaaatagtaaaggttgaacaccttataagtaagaggacctataaa 37991059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 22304218 - 22304297
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  22304218 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 22304297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 39914242 - 39914328
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||| |||| ||||||||||  |||||| | ||||||||||||||    
T  39914242 tgttgttgtgtgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaacaccttataaataagaggacccataaa 39914328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 33803414 - 33803334
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||| ||||||||||||||| || ||||||||||| |||||||||||||||   ||||||| ||||||||||||||    
T  33803414 tgtgtgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaa 33803334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 1634483 - 1634396
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggata-aaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||| |  ||||||| |||| ||||||||| ||||||||||||||    
T  1634483 tgttgctgtgtgcaagtgtgagttatatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaa 1634396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 43346960 - 43346873
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| ||||| ||||||||||||||||||| || ||| ||||||| |||||||||||||||  |||||||| |||| |||||||||    
T  43346960 gtgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaa 43346873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 288
Target Start/End: Original strand, 11661846 - 11662027
Alignment:
Q  122 tggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttccactctagg-ggagc--------------gactcacgcttgagggggagtgttg 206  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||              ||||||| |||  ||||||||||||    
T  11661846 tggctccttgtgcagcaacggcgatacatgcaaagtaaaaagcttccgctctaggaggagcacgataaagtgatggactcacacttttgggggagtgttg 11661945  T
Q  207 ctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
     ||| || |||||||||||| ||| | || || ||||||||||||||||||||||||  ||| |||| ||||| | ||||||    
T  11661946 ttgtatgtaagtgtgagttaaatgccccacattggataaaagagtaaaggttgaacaccttaaaagtgagaggcctcataaa 11662027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 12114730 - 12114644
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||| |||||||| || || |||||||| || |||||||||||||||  |||||||| ||||||||||||||    
T  12114730 tgttgttgtgtgcaagtgtaagttatatatcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaa 12114644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 42342278 - 42342172
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||| | ||||||  || |||||||||||||||||| ||| ||    |||||||| |||||||    
T  42342278 gactcacacttgagggggagtgttgttgtgtgcaagtgtgattcatatgttccacatcggataaaagagtaaatgttcaatgccttataagtaagaggac 42342179  T
Q  282 ccataaa 288  Q
     ||||||    
T  42342178 tcataaa 42342172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 49336855 - 49336769
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||||||||||||| |||||||| |||||||| || |||||||||||| ||  |||||||| ||||||||||||||    
T  49336855 tgttgttgtgtacaagtgtgagttacatgtctcacatcggatagaaaagtaaaggttgaccaccttataagtaagaggacccataaa 49336769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 280
Target Start/End: Complemental strand, 53118142 - 53118064
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagagga 280  Q
    ||||| |||| |||||||||||||||||||  || |||||||||||||||||||||||||||  |||||||| ||||||    
T  53118142 tgttgttgtgggcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtgagagga 53118064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 53577354 - 53577416
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacat 264  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  53577354 tgttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaacat 53577416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 54018358 - 54018280
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||    ||||||||||||||||||| |||||||  |||||||| ||||||||||||||    
T  54018358 tgtgcaagtgtgagttatatgtcctgcatcggataaaagagtaaagattgaacaccttataagtaagaggacccataaa 54018280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 41359949 - 41359847
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||||    | || |||||||| || ||||||||||||| |  |||||||| |||||||    
T  41359949 gactcacacttaagggggagtgttgttgtgtgcaagtgtgagttat----cccacatcggatacaatagtaaaggttgaataccttataagtaagaggac 41359854  T
Q  282 ccataaa 288  Q
    |||||||    
T  41359853 ccataaa 41359847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 21832528 - 21832425
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||| ||||||||    ||||||||||||||||||||||| || || ||||| || |||||||||||||||  |||||||| |||||||    
T  21832528 gactcacacttgaggcggagtgtta---tgtgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagaggac 21832432  T
Q  282 ccataaa 288  Q
     ||||||    
T  21832431 tcataaa 21832425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 50612610 - 50612534
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| ||||||| |||||||  |||||||| ||||||| ||||||    
T  50612610 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataaa 50612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 33175826 - 33175747
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataa 287  Q
    ||||| |||||||||||||||||||||| ||| |||| || |||||||||||||||  |||||||| |||| ||||||||    
T  33175826 tgtgtacaagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataagtaagagaacccataa 33175747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 52634666 - 52634751
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||   |||||||| ||| ||||||||||    
T  52634666 tgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaaga-gacccataaa 52634751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 11661525 - 11661602
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagagg 279  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| ||||| |||| ||||| |||||||| |||||    
T  11661525 tgttggtgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaacggttaaacatcttataagtaagagg 11661602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 37726504 - 37726577
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccat 285  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||| |  |||||||| |||||| ||||    
T  37726504 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaatgttgaataccttataagtaagaggatccat 37726577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 43346640 - 43346701
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||| |||||||||||||||||| |||||| || ||||||||||| |||||||||||||||    
T  43346640 tgttgttgtgtgcaagtgtgagttgtatgtcccacatcggataaaatagtaaaggttgaaca 43346701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 9240122 - 9240225
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||| |||||||||   ||||||||||||||||||||||  || |||||||| |  |||||| | ||||||  |||||||| |||||||    
T  9240122 gactcacacttgaggaggagtgttg---tgtgcaagtgtgagttatatgttccacatcggatagagaagtaaaagctgaacaccttataagtaagaggac 9240218  T
Q  282 ccataaa 288  Q
    |||||||    
T  9240219 ccataaa 9240225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 39389070 - 39389146
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||  | ||||||||||| |||||||||||||||  ||| || | ||||||||||||||    
T  39389070 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttaaaactaagaggacccataaa 39389146  T

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Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 45395815 - 45395735
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||| |||||||| || || |||| ||||||||||||||||| ||||  |||||||| |||||| |||||||    
T  45395815 tgtgtgcaagtgtaagttatatatcccacatcgaataaaagagtaaaggttaaacacgttataagtaagaggatccataaa 45395735  T

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Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 45901702 - 45901790
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaag-agtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| ||||| ||||||||||||||||||| || |||||||||||| |  ||||||||||||  |||||||| ||||||| ||||||    
T  45901702 gtgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaagaggacgcataaa 45901790  T

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Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 22304136 - 22304061
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggt 257  Q
    ||||||| |||||||| || ||||| ||||| ||||||||||||||||||| || ||| ||||||| |||||||||    
T  22304136 gactcacacttgagggagaatgttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggt 22304061  T

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Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 39935104 - 39935037
Alignment:
Q  221 gagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||  | |||||||||||||||||||||||||||  |||||||| |||||| |||||||    
T  39935104 gagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggatccataaa 39935037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 22303853 - 22303783
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgc-aaagtaaaaagcttccactctagggga 179  Q
    ||||||| |||||||||||||||||||||||||| || || || |||||||||||||||| || |||||||    
T  22303853 acaagcagcaagtggcttcttgtgcagcaacggcgattcaggcaaaagtaaaaagcttccgctttagggga 22303783  T

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Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 32589694 - 32589779
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||| ||||||| || ||  ||||||| | |||||||||||||  |||||||| ||||||||||||||    
T  32589694 tgttgttgtgtgcaagtgtgagt-atatgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaa 32589779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 32463070 - 32462982
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagt-aaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| ||||| ||||||||||||||||||| || |||||||| |||||| |||||||||| |  |||||||| ||| ||| ||||||    
T  32463070 gtgttgttgtgtacaagtgtgagttatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaa 32462982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 42584970 - 42584904
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||| || |||||||| |||||||||| |||||||  |||||||| |||||| |||||||    
T  42584970 agttatatgtcccacatcggatagaagagtaaagattgaacaccttataagtaagaggatccataaa 42584904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 3135224 - 3135155
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||| || ||||||||||| |||||| ||||||||  |||||||| | || |||||||||    
T  3135224 gtgagttatatgtcccacatcggataaaatagtaaatgttgaacaccttataagtaaaagaacccataaa 3135155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 3135629 - 3135568
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||| ||||| ||||||||||||||||||| ||  || |||||||||||||| ||||||||    
T  3135629 tgttgttgtgtacaagtgtgagttatatgtcccacctcagataaaagagtaaaagttgaaca 3135568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 7767476 - 7767396
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| |||| ||||||||||||| || |||||||| || ||||||||||| |||  |||||| | ||||||| ||||||    
T  7767476 tgtgtgtaagtctgagttatatgtcccacatcggatagaaaagtaaaggttggacactttataactaagaggactcataaa 7767396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 39336391 - 39336311
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || |||||||| ||   |  ||||||||||  |||||||| |||||| |||||||    
T  39336391 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaagttggaggttgaacactttataagtgagaggatccataaa 39336311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 44160702 - 44160626
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||| |||||||||| ||| || |||||||| | |||||||||||||  |||||| | |||||| |||||||    
T  44160702 tgcaagtgtcagttatatgtttcatattggataaaacaataaaggttgaacaccttataaataagaggatccataaa 44160626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 288
Target Start/End: Complemental strand, 3384427 - 3384348
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||| |||||||||||||| || ||  ||||||| |||| ||||| ||||  |||||||  ||||||||||||||    
T  3384427 gtgtgcaagcgtgagttatatgtcccacatatgataaaacagtataggttaaacactttataaggaagaggacccataaa 3384348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 33362451 - 33362375
Alignment:
Q  215 aagtgtgagttatatg---tctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||   |||||  |||||||||| | ||||||||||| |  |||||||| ||||||||||||||    
T  33362451 aagtgtgagttatatgatatctcatgtcggataaaataataaaggttgaataccttataagtaagaggacccataaa 33362375  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 12747914 - 12747878
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    ||||||||||||||||||||||||| || ||||||||    
T  12747914 tgtgtgcaagtgtgagttatatgtcccacatcggata 12747878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 17644 - 17538
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||||| |||||||||||||||  || ||||| |||||||    
T  17644 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggac 17545  T
Q  282 ccataaa 288  Q
    |||||||    
T  17544 ccataaa 17538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 8e-30; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 9309325 - 9309431
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||||  |||||||| |||||||    
T  9309325 gactcacaattgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagaggac 9309424  T
Q  282 ccataaa 288  Q
    || ||||    
T  9309425 ccttaaa 9309431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 8918952 - 8918846
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| || ||| ||||  |||||||||||||||||  |||||||| |||||||    
T  8918952 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggac 8918853  T
Q  282 ccataaa 288  Q
    |||||||    
T  8918852 ccataaa 8918846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 30359579 - 30359685
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||  |||||||| |||||||    
T  30359579 gactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagaggac 30359678  T
Q  282 ccataaa 288  Q
     ||||||    
T  30359679 tcataaa 30359685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 190 - 288
Target Start/End: Original strand, 34835187 - 34835285
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||| |||| |||||||||||||| || ||| ||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  34835187 cttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 34835285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 45122984 - 45123057
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||    
T  45122984 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaaca 45123057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 45122219 - 45122139
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||| |||| |||||||||    
T  45122219 tgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaacccataaa 45122139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 8794100 - 8794187
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||    
T  8794100 gtgttgttgtgtacaagtgtgagttatatgtctcacatcggataaaagaataaatgttgaacatcttataagtaagaggactcataaa 8794187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 284
Target Start/End: Complemental strand, 18372442 - 18372342
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||   ||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||| ||| |||    
T  18372442 gactcacacttgagggggagtgttgttgtga--aagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaagac 18372345  T
Q  282 cca 284  Q
    |||    
T  18372344 cca 18372342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 30359261 - 30359347
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||  |||||||  ||||||||||||||    
T  30359261 tgttgttgtgtacaagtgtgagttatatgtctcacatcggataaaagagtaaatgttgaacaccttataagcaagaggacccataaa 30359347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 43274947 - 43274861
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||  ||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  43274947 tgttgttgtgtataagtgtgagttatatgtttcacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaa 43274861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 147799 - 147880
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||| ||||||| |||||| ||||||||    
T  147799 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatctgataaaaaagtaaatgttgaaca 147880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 3670032 - 3670136
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||| || ||||||||||| |||||||||| ||||  ||||||||  ||||||    
T  3670032 gactcacacttgagggggactgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtttaacaccttataagtatgaggac 3670129  T
Q  282 ccataaa 288  Q
    |||||||    
T  3670130 ccataaa 3670136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 9482782 - 9482686
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||| ||||| ||||||  ||||||||||  || || ||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  9482782 cttgagggggagtgttgttgtgtacaagtg--agttatatgttccacatgggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 9482686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 34835444 - 34835551
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaat-cggataaaagagtaaaggttgaacatattataagttagagga 280  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||  | | ||||||| |||||||||| ||||  |||||||| ||||||    
T  34835444 gactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagagga 34835543  T
Q  281 cccataaa 288  Q
    ||||||||    
T  34835544 cccataaa 34835551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 34835710 - 34835817
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaat-cggataaaagagtaaaggttgaacatattataagttagagga 280  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||||||||| ||  | | ||||||| |||||||||| ||||  |||||||| ||||||    
T  34835710 gactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagagga 34835809  T
Q  281 cccataaa 288  Q
    ||||||||    
T  34835810 cccataaa 34835817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 147441 - 147527
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| || ||| |||||||||||||||||| || |||||||||||||||||||||||||||  |||||| | ||||||||||||||    
T  147441 tgttgttgcgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaa 147527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 3038458 - 3038372
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| | ||||||||||||    
T  3038458 tgttgttgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaa 3038372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 25561972 - 25561898
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||| || |||||||||||||||||| ||||||||  |||||||| ||||||||||||||    
T  25561972 caagtgtgagttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaa 25561898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 45121843 - 45121738
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||| ||||||||||||| ||||| |||||||||||| | |||| || |||||||||||||||||||||||| ||  |||||||| ||||||     
T  45121843 gactcacacttaagggggagtgttgttgtgtacaagtgtgagttgt-tgtcccacatcggataaaagagtaaaggttgatcaccttataagtaagaggat 45121745  T
Q  282 ccataaa 288  Q
    |||||||    
T  45121744 ccataaa 45121738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 70425 - 70356
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||| || |||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  70425 gtgagttatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagaggacccataaa 70356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 9608741 - 9608821
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || |||||||| || |||||||||||||||  |||||||| ||| ||||||||||    
T  9608741 tgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccataaa 9608821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 41972154 - 41972234
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || |||||||| || |||||||||||||||  |||||||| | ||||||||||||    
T  41972154 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgataggacccataaa 41972234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 1014057 - 1013953
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||  || ||||||||||| |||||| ||||||||   ||||||| |||||||    
T  1014057 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgttccacatcggataaaatagtaaaagttgaacaccctataagtaagaggac 1013960  T
Q  282 ccataaa 288  Q
    | |||||    
T  1013959 caataaa 1013953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 9308973 - 9309055
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtct--caaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||||   || ||| |||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  9308973 tgtgtgcaagtgtgagttatatgtcctacacatcagataaaagagtaaaagttgaacatgttataagtaagaggacccataaa 9309055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 284
Target Start/End: Complemental strand, 18372859 - 18372785
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggaccca 284  Q
    |||| |||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||    
T  18372859 tgtgaaagtgtgagttatatgtcacacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccca 18372785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 33113535 - 33113449
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||||| |||||||||||||  | ||||||||||| |||||||||||||| | |||||||| ||||||||||||||    
T  33113535 tgttgttgtgtacaagtttgagttatatgtcctacatcggataaaatagtaaaggttgaacgtcttataagtaagaggacccataaa 33113449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 37544646 - 37544572
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||| ||| || ||||||||||| ||||||||||||||| ||||||||  ||||||||||||||    
T  37544646 caagtgtgagttataagtcgcacatcggataaaatagtaaaggttgaacacattataagaaagaggacccataaa 37544572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 288
Target Start/End: Complemental strand, 45122070 - 45121992
Alignment:
Q  210 tgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||| || |||| |||||| |||||||||||||||  |||||||| ||||||| ||||||    
T  45122070 tgtgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaa 45121992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 1514077 - 1513997
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| |||||||||| || || |||||||||||||||||||||||||||  |||||||| ||||||||| ||||    
T  1514077 tgtgtacaagtatgagttatatatcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccttaaa 1513997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 3669687 - 3669763
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||| ||||||| |||||||||||||||  |||||||| ||||||| ||||||    
T  3669687 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaa 3669763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 40518555 - 40518658
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||| |||   ||| ||||||||||||||||||| || ||| |||| || |||||||||||||||  |||||| | |||||||    
T  40518555 gactcacacttgagggggagtattg---tgttcaagtgtgagttatatgtcccacatcagatagaaaagtaaaggttgaacaccttataaataagaggac 40518651  T
Q  282 ccataaa 288  Q
    |||||||    
T  40518652 ccataaa 40518658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 9483324 - 9483269
Alignment:
Q  233 tcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  9483324 tcaaatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 9483269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 6877032 - 6876946
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatat-gtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccata 286  Q
    |||||| |||||||||||||||||||||| ||| || ||||||||||| |||||||||||||||  |||||| | ||| ||||||||    
T  6877032 gtgttgttgtgtgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaacaccttataaataagatgacccata 6876946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 32640682 - 32640632
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacata 265  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  32640682 aagtgtgagttatctgtctcacatcggataaaagagtaaaggttgaacata 32640632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 40579662 - 40579588
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||| |||||||| ||| || |||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  40579662 caagtgtgaattatatgtttcatattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 40579588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 41416322 - 41416253
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||| || ||||||||||| |||||||||||||||  |||||||| |||||| |||||||    
T  41416322 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaa 41416253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 1014403 - 1014327
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||  | ||| ||||||| |||||||||||||||  |||||||| ||||||||| ||||    
T  1014403 tgcaagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccgtaaa 1014327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 5420651 - 5420727
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||  ||||||||| || |||||||| || |||||||||||||||| |||||||| ||||||| ||||||    
T  5420651 tgcaagtgtgtattatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaa 5420727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 6731876 - 6731953
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaa 261  Q
    |||||||  |||||||||||||||| | ||  ||||||||||||||||||| || ||||||||||| |||||||||||||    
T  6731876 gactcacatttgagggggagtgttgttttg--caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 6731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 18371842 - 18371762
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacat 264  Q
    ||||||| |||||||||||||| || |||||  |||||  ||||||||||| || ||||||||||| ||||||||||||||||    
T  18371842 gactcacacttgagggggagtgctgttgtgtagaagtg--agttatatgtcacacatcggataaaatagtaaaggttgaacat 18371762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 18372557 - 18372485
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaagg 256  Q
    ||||||| ||||||||||||||||| ||||   |||||||||||||||||| || ||||||||||| ||||||||    
T  18372557 gactcacacttgagggggagtgttgttgtga--aagtgtgagttatatgtcccacatcggataaaatagtaaagg 18372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 20870733 - 20870655
Alignment:
Q  212 tgcaagtgtgagttatatgtct--caaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||| | |  || ||| ||||||| |||||||||||||||| |||||||| ||||||||||||||    
T  20870733 tgcaagtgtgagttatatatgttccacatcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaa 20870655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 25561792 - 25561729
Alignment:
Q  222 agttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccat 285  Q
    ||||||||||| || |||||||||||||||||||||||||||  |||||||| |||| ||||||    
T  25561792 agttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagtacccat 25561729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 34834865 - 34834952
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||| ||||| ||||||||||||||||||| || || |||||||| |||||||||| ||||  |||||||| ||| ||| ||||||    
T  34834865 gtgttgttgtgtacaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagatgactcataaa 34834952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 18373118 - 18373013
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||  ||||||||| ||||| || |||||| ||||||||| ||  |||||||||| |||||||||||||||  |||||| | |||||||    
T  18373118 gactcacacttgagatggagtgttgttgtgtaca-gtgtgatttatatgtcccacttcggataaaatagtaaaggttgaacaccttataaataagaggac 18373020  T
Q  282 ccataaa 288  Q
     ||||||    
T  18373019 tcataaa 18373013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 3669945 - 3669994
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  3669945 acaagcaacaagtggctccttgtgcaggaacggcgatacatgcaaagtaa 3669994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 4154828 - 4154748
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || ||| |||| || |||  ||||||||||  |||||||| | ||||||||||||    
T  4154828 tgtgtgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataagtgaaaggacccataaa 4154748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 9620838 - 9620758
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||||||| | | |||| || |||| | ||||| ||  |||||||| ||||||||||||||    
T  9620838 tgtgtgcaagtgtgagttatatgtctcacaacagatagaaaagtagaagttgatcactttataagtgagaggacccataaa 9620758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 20995563 - 20995508
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||  ||||||||||    
T  20995563 tgtgtgcaagtgtgagttatatgtctcacatcagataaaaaagtggaggttgaaca 20995508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 30441081 - 30441132
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||||||||||||||||| || ||||| ||||| |||||||||||||||    
T  30441081 tgcaagtgtgagttatatgtcccacatcggctaaaatagtaaaggttgaaca 30441132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 45122649 - 45122700
Alignment:
Q  237 atcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  45122649 atcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 45122700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 6651510 - 6651552
Alignment:
Q  219 gtgagttatatgtctcaaatcggataaaagagtaaaggttgaa 261  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  6651510 gtgagttatatgtctcacatcggataaaatagtaaaggttgaa 6651552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 20130454 - 20130500
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  20130454 gtgtgagatatatgtctcacatcggataaaagagtaaaagttgaaca 20130500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 18645749 - 18645713
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggata 244  Q
    |||||||||||||||||||||||||||| ||||||||    
T  18645749 tgtgtgcaagtgtgagttatatgtctcacatcggata 18645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 43398225 - 43398161
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagagga 280  Q
    |||||||||||||| ||||| |||||||| || |||||||||||||||  |||||| | ||||||    
T  43398225 agtgtgagttatatatctcatatcggatagaaaagtaaaggttgaacaccttataaataagagga 43398161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 18372758 - 18372685
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||| ||||||||  ||  |||||||||| |||||||||||||||  |||||||| ||||||| ||||||    
T  18372758 caagtgtgatttatatgttccatttcggataaaatagtaaaggttgaaca-cttataagtaagaggactcataaa 18372685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 1014144 - 1014095
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||| ||||||||| ||||||||| |||| | |||||||||||||||    
T  1014144 acaagcagcaagtggctccttgtgcaggaacgacgatacatgcaaagtaa 1014095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 18380171 - 18380114
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagt 273  Q
    |||||||||||||| || || |||| |||||| |||||||||||||||  ||||||||    
T  18380171 agtgtgagttatatatcccacatcgaataaaatagtaaaggttgaacaccttataagt 18380114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 43274755 - 43274702
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctca 235  Q
    ||||||| ||||||||  ||||||| ||||| |||||||||||||||| |||||    
T  43274755 gactcacacttgagggacagtgttgttgtgtacaagtgtgagttatatatctca 43274702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 8e-30; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 2578630 - 2578525
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||| || | |||||||||||||||||||||||||  |||||||| |||||||    
T  2578630 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacactttataagtaagaggac 2578532  T
Q  282 ccataaa 288  Q
    |||||||    
T  2578531 ccataaa 2578525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 2580040 - 2579954
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  2580040 tgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaa 2579954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 29518892 - 29518996
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| |||||||    
T  29518892 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 29518989  T
Q  282 ccataaa 288  Q
    |||||||    
T  29518990 ccataaa 29518996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 16108033 - 16108139
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||  || ||| |||||||||||||| ||||||||  |||||||| |||||||    
T  16108033 gactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcagataaaagagtaaatgttgaacaccttataagtaagaggac 16108132  T
Q  282 ccataaa 288  Q
    |||||||    
T  16108133 ccataaa 16108139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 35210204 - 35210280
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  35210204 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 35210280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 3409632 - 3409736
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||  || ||| ||||||| |||||| ||||||||| |||||||| |||||||    
T  3409632 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtaccacatcagataaaatagtaaaagttgaacatcttataagtaagaggac 3409729  T
Q  282 ccataaa 288  Q
    |||||||    
T  3409730 ccataaa 3409736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 593877 - 593791
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||| ||||||||||||||| |||||| || |||||||||||||||||||||||||||  |||||||| ||||||| ||||||    
T  593877 tgttgctgagtgcaagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaa 593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 2378111 - 2378202
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||  || ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  2378111 gggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 2378202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 2579293 - 2579203
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataag 272  Q
    ||||||| ||||||||||||||||| ||||| ||||||| ||||||||||| || |||||||||||||||||| ||||||||  |||||||    
T  2579293 gactcacacttgagggggagtgttgttgtgtacaagtgttagttatatgtcccacatcggataaaagagtaaaagttgaacaccttataag 2579203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 191 - 288
Target Start/End: Original strand, 16454886 - 16454983
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||| ||||| ||| |||||||||| |||| || ||| |||||||||||||||||||||||  |||||||| | ||||||||||||    
T  16454886 ttgagggggagtgttgttgtgtacaaatgtgagttatgtgtcccacatcagataaaagagtaaaggttgaacaccttataagtaataggacccataaa 16454983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 26544049 - 26544125
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  26544049 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaa 26544125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 29518503 - 29518579
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  29518503 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 29518579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 32741179 - 32741255
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  32741179 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 32741255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Original strand, 2377756 - 2377830
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||||||  |||||||| ||||||||||||||    
T  2377756 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaa 2377830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 3409259 - 3409335
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||| ||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  3409259 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 3409335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 10074548 - 10074445
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||| |||||||||||||   ||||||||||||||||| | ||| || |||||||| || |||||||||||||||  |||||||| |||||||    
T  10074548 gactcacacttaagggggagtgttg---tgtgcaagtgtgagttagaggtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggac 10074452  T
Q  282 ccataaa 288  Q
    |||||||    
T  10074451 ccataaa 10074445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 14748496 - 14748420
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||| | ||||||||||||||    
T  14748496 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaa 14748420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 5832182 - 5832108
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||| ||||||||||| || || ||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  5832182 caagtgtaagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 5832108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 218 - 288
Target Start/End: Complemental strand, 9062501 - 9062431
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||| |||||||| ||||||| ||||||    
T  9062501 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggactcataaa 9062431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 16107668 - 16107754
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| |||||||||||||||||| ||| ||||||||||| |||||||||| ||||  |||||||| ||||||| ||||||    
T  16107668 tgttgttgtgtacaagtgtgagttatatgtgtcacatcggataaaaaagtaaaggttaaacaccttataagtaagaggactcataaa 16107754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 1950340 - 1950267
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||  ||| |||| |||||| |||||||    
T  1950340 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaagaggagccataaa 1950267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 1846748 - 1846824
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||| || ||||||||| ||||||||||| |||||||||||||||  |||||||| |||| |||||||||    
T  1846748 tgcaagtgtgaattctatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagcacccataaa 1846824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 10074168 - 10074073
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||   |||||||| ||||||||||| || || |||||||| || |||||| ||||||||  |||||||| ||||||||||||||    
T  10074168 cttgagggggagtgttg---tgtgcaagggtgagttatatatcccacatcggatagaaaagtaaacgttgaacaccttataagtaagaggacccataaa 10074073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 16454565 - 16454651
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| |||||||||||||| |||| || ||| ||||||||| |||| ||||||||  |||||||| ||||||||||||||    
T  16454565 tgttgttgtgtacaagtgtgagttatgtgtcccacatcagataaaagaataaaagttgaacaccttataagtaagaggacccataaa 16454651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 3058226 - 3058302
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||| ||||||||||| || ||||||||||| |||||||||||||||  ||||||||  ||||| |||||||    
T  3058226 tgcaagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtatgaggatccataaa 3058302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 32460733 - 32460662
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||| || |||| |||||| |||||||||||||||  |||||||| ||||||| ||||||    
T  32460733 gtgtgagttatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagaggactcataaa 32460662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 10073776 - 10073698
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||| ||||||||||| || |||||| |||  |||||||||||||||  |||||||| |||||| |||||||    
T  10073776 tgtgtgcaagtgttagttatatgtcccacatcggagaaa--agtaaaggttgaacaccttataagtaagaggatccataaa 10073698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 1127360 - 1127436
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||||||||| || || ||||| ||||| |||||||||||||||  |||||||| ||||||| ||||||    
T  1127360 tgcaactgtgagttatatatcccacatcgggtaaaatagtaaaggttgaacaccttataagtaagaggactcataaa 1127436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 3415462 - 3415534
Alignment:
Q  216 agtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||| || |||  |||||| |||||||||||||||   ||||||| ||||||||||||||    
T  3415462 agtgtgagttatatgtcccacatcacataaaatagtaaaggttgaacaccatataagtaagaggacccataaa 3415534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 288
Target Start/End: Complemental strand, 5958764 - 5958685
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||| |||||||||||||| | | ||||||||||| |||||||||||||||  |||||| | |||| || ||||||    
T  5958764 gtgtgcaattgtgagttatatgtgttacatcggataaaacagtaaaggttgaacaccttataaataagagaactcataaa 5958685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 2843560 - 2843625
Alignment:
Q  218 tgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggaccc 283  Q
    |||||||||||||| ||| ||||||||||| | |||| ||||||||  |||||||| |||||||||    
T  2843560 tgtgagttatatgtttcacatcggataaaataataaaagttgaacaccttataagtaagaggaccc 2843625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 6999951 - 6999878
Alignment:
Q  215 aagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||  | ||||||||||| |||||| ||||||||  ||||| || |||||| |||||||    
T  6999951 aagtgtgagttatatgtcctacatcggataaaaaagtaaaagttgaacaccttatatgtaagaggatccataaa 6999878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 10911565 - 10911642
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaaga-gtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||  | ||| ||||||| | ||||||||||||||  |||||||| ||||||| ||||||    
T  10911565 tgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagaggactcataaa 10911642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 8481898 - 8481947
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtc 232  Q
    ||||||| ||||||||||||  ||| |||||||||||||||||||||||||    
T  8481898 gactcacacttgagggggaga-ttgttgtgtgcaagtgtgagttatatgtc 8481947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 288
Target Start/End: Complemental strand, 2579016 - 2578917
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggaccca 284  Q
    |||| |||||||||||||||||   || |||||||||| ||||||||| |  ||||||||||| |||||| |||||| |  |||||| | |||||| |||    
T  2579016 tcacacttgagggggagtgttg---tgagcaagtgtgatttatatgtccctcatcggataaaa-agtaaatgttgaataccttataaataagaggatcca 2578921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 2579677 - 2579574
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||| |||||||| |    ||| |||||||||||||||| || |||||| |||| ||||||||| | | |  |||||||| ||||| |    
T  2579677 gactcacacttgagggagagtgttgtta---gcaggtgtgagttatatgtcccacatcggacaaaaaagtaaaggtcggataccttataagtaagagggc 2579581  T
Q  282 ccataaa 288  Q
    |||||||    
T  2579580 ccataaa 2579574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 6071128 - 6071208
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||| || || | ||| || |||  ||||||||||  |||||||| ||| || |||||||    
T  6071128 tgtgtgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacactttataagtgagatgatccataaa 6071208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 38796406 - 38796300
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||| ||||||||  |||||||| |||||||    
T  38796406 gactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataagtaagaggac 38796307  T
Q  282 ccataaa 288  Q
    | |||||    
T  38796306 ctataaa 38796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 37106160 - 37106264
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| |||||||    
T  37106160 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac 37106257  T
Q  282 ccataaa 288  Q
    |||||||    
T  37106258 ccataaa 37106264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 15880233 - 15880339
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||| ||||| ||||||| ||||| ||||||||||||||||||  || |||||||||||||||||||||||||||  |||||||| |||||||    
T  15880233 gactcacacttaaggggaagtgttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagaggac 15880332  T
Q  282 ccataaa 288  Q
    |||||||    
T  15880333 ccataaa 15880339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 5542811 - 5542707
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||  || ||||||||||||||||||||| || |||| |||||| |||||||||||||||  |||||||| |||||||    
T  5542811 gactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccatatcgaataaaatagtaaaggttgaacaccttataagtaagaggac 5542714  T
Q  282 ccataaa 288  Q
    |||||||    
T  5542713 ccataaa 5542707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 7598581 - 7598684
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||| ||||||||||  |||||||||||||||||||||||| || ||| ||||||| |||||||||||||||  |||||||| |||||||    
T  7598581 gactcacacttgagagggagtgttg--gtgtgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggac 7598678  T
Q  282 ccataa 287  Q
    ||||||    
T  7598679 ccataa 7598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 31468926 - 31468844
Alignment:
Q  190 cttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataag 272  Q
    ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||| || |||||||    
T  31468926 cttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaatatcttataag 31468844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 36785751 - 36785670
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaaca 263  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  36785751 gactcacactttagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 36785670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 280
Target Start/End: Original strand, 29676873 - 29676971
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagagga 280  Q
    ||||||| |||||||||| |||||| |||||||| |||||||||||||||| || |||||||||||||||||||||| ||||  ||||| || ||||||    
T  29676873 gactcacacttgagggggtgtgttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggtttaacaccttataggtgagagga 29676971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 40733487 - 40733593
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||| ||||||  ||||| ||||||||||||||||||| || ||| ||||||| |||||| ||||||||  |||||||| |||||||    
T  40733487 gactcacacttgaggggaagtgttattgtgtacaagtgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagaggac 40733586  T
Q  282 ccataaa 288  Q
    |||||||    
T  40733587 ccataaa 40733593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 288
Target Start/End: Original strand, 6421369 - 6421461
Alignment:
Q  196 ggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||| |||||| ||||  ||||||||||||||||||| || |||||||||||||||||||||||||||  |||||||| ||||||| ||||||    
T  6421369 ggggggtgttgttgtgcacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaa 6421461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 288
Target Start/End: Original strand, 6712964 - 6713052
Alignment:
Q  200 agtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||| ||| | |||||||||||||||||||||| ||||||||||| |||||| ||||||||  |||||||| ||||||||||||||    
T  6712964 agtgttgttgtatacaagtgtgagttatatgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaa 6713052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 28531499 - 28531396
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||   ||||||||||||||||||||||| || |||||||| || || ||||||||||||  |||||||| ||||| |    
T  28531499 gactcacacttgagggggagtgttg---tgtgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagaggtc 28531403  T
Q  282 ccataaa 288  Q
    |||||||    
T  28531402 ccataaa 28531396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 36178763 - 36178687
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  36178763 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 36178687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 41283633 - 41283557
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  41283633 tgcaagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 41283557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 1769889 - 1769968
Alignment:
Q  209 gtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||| || |||||||||||||||||| ||||||||  |||||||| ||||||| ||||||    
T  1769889 gtgtgcaagtgtgagttatatgtcacacatcggataaaagagtaaaagttgaacaccttataagtaagaggactcataaa 1769968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 28254405 - 28254319
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||| ||||||| ||||||||| || |||||||| || |||||||||||||||| |||||||| ||||||||||||||    
T  28254405 tgttgttgtgtgccagtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaa 28254319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 38796788 - 38796702
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||||||||||||| || ||| ||||||| | |||||||||||||  |||||||| ||||||||||||||    
T  38796788 tgttgttgtgtgcaagtgtgagttatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagaggacccataaa 38796702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 279
Target Start/End: Original strand, 40733853 - 40733950
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagagg 279  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||||||| || |||| |||||||||||||| || ||||  |||||||| |||||    
T  40733853 gactcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaagatttaacaccttataagtaagagg 40733950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 962598 - 962674
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || |||||||| || |||||||||||||||  |||||||| ||||||||||||||    
T  962598 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaa 962674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 14745825 - 14745749
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || || |||||||| |||||||||||||||  |||||||| ||||||||||||||    
T  14745825 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 14745749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 37632759 - 37632679
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||||||  | ||||||||||| ||||||||||  |||| |||||||| ||||||||||||||    
T  37632759 tgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagaggacccataaa 37632679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 40679814 - 40679711
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||||||||||||   ||||||| ||||||||||||||| || |||||||| || ||||| |||||||||  |||||||| |||| ||    
T  40679814 gactcacacttgagggggagtgttg---tgtgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacaccttataagtaagagaac 40679718  T
Q  282 ccataaa 288  Q
    |||||||    
T  40679717 ccataaa 40679711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 15511661 - 15511577
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||  ||||||||||| || | |||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  15511661 tgttgttgtgtgcaagtg--agttatatgtcacacaacggataaaagagtaaaggttgaacacgttataagtaagaggacccataaa 15511577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 31899594 - 31899508
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||| |||||||||||||||||  || ||||||||||| |||||| ||||||||  |||||||| ||||||||||||||    
T  31899594 tgttgttgtgtgaaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaa 31899508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 5543156 - 5543080
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || ||| ||||||| |||||||||||||||  |||||||| |||||| |||||||    
T  5543156 tgcaagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggatccataaa 5543080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 16542438 - 16542518
Alignment:
Q  201 gtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    |||||| ||||||||||||||||||||| ||| || ||||||||||| |||||||||||||||  |||||| | |||||||    
T  16542438 gtgttgttgtgtgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggac 16542518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 29676543 - 29676611
Alignment:
Q  220 tgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||| || |||||||||||||||| ||||||| ||||||||| |||| |||||||||    
T  29676543 tgagttatatgtctcacattggataaaagagtaaagattgaacacattataagtgagagaacccataaa 29676611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 37105924 - 37106000
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||| || |||| |||||| |||||||||||||||  |||||||| || |||||||||||    
T  37105924 tgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaa 37106000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 6421289 - 6421352
Alignment:
Q  197 gggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttga 260  Q
    |||||||||| ||||| ||||||| ||||||||||| || ||||||||||||||||||||||||    
T  6421289 gggagtgttgttgtgtacaagtgtaagttatatgtcccacatcggataaaagagtaaaggttga 6421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 33731653 - 33731724
Alignment:
Q  217 gtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||  |||||||| |||||| |||||||    
T  33731653 gtgtgagttatatatctcacatcggataaaagagtaaaggttgagcaccttataagtaagaggatccataaa 33731724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 36178455 - 36178351
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||| |||||  || ||||||||||||||||||||| ||  |||||||||| ||||||||| |||||  |||||||| || ||||    
T  36178455 gactcacacttgagggggactgttg--gtttgcaagtgtgagttatatgtcccacttcggataaaatagtaaaggtggaacaccttataagtaaggggac 36178358  T
Q  282 ccataaa 288  Q
     ||||||    
T  36178357 tcataaa 36178351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 35580885 - 35580811
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacc 282  Q
    ||||||||||||||||||||||||| || ||||||||||| | |||| ||||||||  |||||||| ||||||||    
T  35580885 tgtgtgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagaggacc 35580811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 3673055 - 3673120
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaa 247  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||||| || || ||||||||    
T  3673055 gactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttatatgtcccacattggataaaa 3673120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 9231245 - 9231322
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccat 285  Q
    |||||| |||| |||||||||||||||| ||| |||| || ||||||||||||||||||||||| | |||||| ||||    
T  9231245 tgtgtgtaagtatgagttatatgtctcatatcagatagaaaagtaaaggttgaacatattataaataagaggatccat 9231322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 42514649 - 42514725
Alignment:
Q  212 tgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||  | ||| |||| || |||||||||||||||  |||||||| ||||||||||||||    
T  42514649 tgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaa 42514725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 31259787 - 31259698
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatc---ggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| |||||| ||||| ||||||||||||||| |||   ||||||||||||||||||| ||||  |||||||| ||| ||||||||||    
T  31259787 tgttgttgtgtgtaagtgcgagttatatgtctcacatcatcggataaaagagtaaaggttcaacaccttataagtaagatgacccataaa 31259698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 36006047 - 36005962
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||| ||||||||||||||||||| || |||| ||| || |||||| ||||||||  |||||||| ||||||||||||||    
T  36006047 tgttgttgtgtacaagtgtgagttatatgtcccacatcgaatagaa-agtaaaagttgaacaccttataagtaagaggacccataaa 36005962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 14745466 - 14745376
Alignment:
Q  196 ggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||  || ||||| ||||||||||||||| || |||| |||||| ||||| |||||||||| || |||||  |||||||||||||    
T  14745466 ggggagtgttg--gtttgcaactgtgagttatatgtcccacatcgaataaaatagtaatggttgaacatcttgtaagtatgaggacccataaa 14745376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 30313149 - 30313249
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||| ||  ||| |||||||||| ||| ||||||||||||| |||||||| || |||  ||||||||||  |||||||| |||||||    
T  30313149 gactcacacttgaggggaaga-ttgttgtgtgcaagcgtgtgttatatgtctcacatcggatagaaaagtggaggttgaaca-cttataagtgagaggac 30313246  T
Q  282 cca 284  Q
    |||    
T  30313247 cca 30313249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 30323435 - 30323540
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||  ||| |||||||||||||| |||||||||| |||||| |||| || | |  ||||||||||  ||| |||| |||||||    
T  30323435 gactcacacttgagggggaga-ttgttgtgtgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacactttagaagtgagaggac 30323533  T
Q  282 ccataaa 288  Q
    | |||||    
T  30323534 ctataaa 30323540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 5367451 - 5367516
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagt 273  Q
    ||||| |||||||||  |||||||| || |||||||||||||| ||||||||||||  ||||||||    
T  5367451 tgtgtacaagtgtgatatatatgtcccagatcggataaaagagcaaaggttgaacaccttataagt 5367516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 6422126 - 6422186
Alignment:
Q  228 atgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| || ||| ||||||| ||||||||||||||| ||||||| | ||||||||||||||    
T  6422126 atgtcccacatcagataaaaaagtaaaggttgaacacattataattaagaggacccataaa 6422186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 28254254 - 28254194
Alignment:
Q  228 atgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||| |||||||| || |||||||||||||||  |||||||| ||||||| ||||||    
T  28254254 atgtctcacatcggatagaaaagtaaaggttgaacactttataagtaagaggactcataaa 28254194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 33561613 - 33561533
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||||||||  || ||| |||| || |||  ||||| ||||  |||||||| ||||||||||||||    
T  33561613 tgtgtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagaggacccataaa 33561533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 288
Target Start/End: Complemental strand, 33953947 - 33953853
Alignment:
Q  191 ttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||   ||||||| ||||||||||| ||| || ||| |||| || |||  ||||||||||   ||||||| ||||||||||||||    
T  33953947 ttgagggggagtgttg---tgtgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacactatataagtgagaggacccataaa 33953853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 40734251 - 40734298
Alignment:
Q  185 tcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtc 232  Q
    |||| ||||||||||||||||  ||||| |||||||||||||||||||    
T  40734251 tcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtc 40734298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 41678554 - 41678449
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagtt--atatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagagg 279  Q
    ||||||| ||||| |||||||||||   ||||||||||||||||  |||||||||| ||| |||| || ||   ||||| ||||  |||||||| |||||    
T  41678554 gactcacacttgaaggggagtgttg---tgtgcaagtgtgagttatatatgtctcacatcagatagaaaaggggaggttaaacactttataagtgagagg 41678458  T
Q  280 acccataaa 288  Q
    |||||||||    
T  41678457 acccataaa 41678449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 29676787 - 29676844
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaaaaagcttcc 168  Q
    ||||||| ||||||||| |||||||||||||||  ||||| || |||||||||||||||    
T  29676787 acaagcagcaagtggctccttgtgcagcaacggaaatacaagc-aagtaaaaagcttcc 29676844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 29873724 - 29873619
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| ||||||||||||  ||| |||||||||| ||| |||| ||||| || ||| |||| || |||  ||||||||||| ||||||||  ||||||    
T  29873724 gactcacacttgagggggaga-ttgttgtgtgcaagggtgtgttacatgtcccacatcagatagaaaagtggaggttgaacattttataagtgggaggac 29873626  T
Q  282 ccataaa 288  Q
     ||||||    
T  29873625 tcataaa 29873619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 40163520 - 40163458
Alignment:
Q  223 gttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccat 285  Q
    |||||||||| || |||||||| || |||||||||||||||  |||||||| ||| |||||||    
T  40163520 gttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccat 40163458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 12529195 - 12529110
Alignment:
Q  203 gttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||| ||| |||||||||||||||||||||  | |||  |||||| ||||||| |||||||   ||||||| ||||||| ||||||    
T  12529195 gttgttgtatgcaagtgtgagttatatgtcctacatcaaataaaacagtaaagattgaacaccgtataagtaagaggactcataaa 12529110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 14745566 - 14745517
Alignment:
Q  110 acaagcaacaagtggcttcttgtgcagcaacggctatacatgcaaagtaa 159  Q
    ||||||||||||||||| ||||||||| |||||| |||||  ||||||||    
T  14745566 acaagcaacaagtggctccttgtgcaggaacggcgatacagacaaagtaa 14745517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 16590884 - 16590940
Alignment:
Q  208 tgtgtgcaagtgtgagttatatgtctcaaatcggat-aaaagagtaaaggttgaaca 263  Q
    ||||||||||||||||||||||||| || |||  || |||| |||||||||||||||    
T  16590884 tgtgtgcaagtgtgagttatatgtcccacatcaaataaaaaaagtaaaggttgaaca 16590940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 3173 - 3091
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacat 264  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||| || ||||||||||||||||||||||||||||    
T  3173 gactcacacttgagggggagtgttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacat 3091  T

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Target: scaffold0391; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 1294 - 1204
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataag 272  Q
    ||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| || || ||||||||||||||||||||||||  |||||||    
T  1294 gactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataag 1204  T

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Target: scaffold0078 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 5327 - 5433
Alignment:
Q  182 gactcacgcttgagggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggac 281  Q
    ||||||| |||||||| |||| ||| ||||||||||||||||||||||||  || |||||||| || |||||||||||||||  |||||||| |||||||    
T  5327 gactcacacttgagggagagttttgttgtgtgcaagtgtgagttatatgttccacatcggatagaacagtaaaggttgaacaccttataagtaagaggac 5426  T
Q  282 ccataaa 288  Q
    |||||||    
T  5427 ccataaa 5433  T

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Target: scaffold0078; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 4972 - 5058
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||| |||||||||||| |||||| | || |||||||||| || || |||||||| | | ||||||||||    
T  4972 tgttgttgtgtgcaagtgtgaattatatgtctcacatcggagagaacagtaaaggtttaatatcttataagtaaaaagacccataaa 5058  T

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Target: scaffold0702 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 670 - 596
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||||||  |||||||| ||||||||||||||    
T  670 caagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaa 596  T

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Target: scaffold0702; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 282
Target Start/End: Complemental strand, 315 - 230
Alignment:
Q  195 gggggagtgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacc 282  Q
    ||||||||||||  || ||||||||||||||||||||| || ||||||||||| |||||||||||||||  |||||||| ||||||||    
T  315 gggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 230  T

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Target: scaffold0504 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 10267 - 10193
Alignment:
Q  214 caagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    |||||||||||||||||||||| |||||||||||  ||||| ||||||||  |||||||| ||||||||||||||    
T  10267 caagtgtgagttatatgtctcacatcggataaaatggtaaaagttgaacaccttataagtaagaggacccataaa 10193  T

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Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 288
Target Start/End: Original strand, 47350 - 47436
Alignment:
Q  202 tgttgctgtgtgcaagtgtgagttatatgtctcaaatcggataaaagagtaaaggttgaacatattataagttagaggacccataaa 288  Q
    ||||| ||||||||||||||| ||| |||||||| ||| ||||||| ||||||| |||||||  |||||||| |||| | |||||||    
T  47350 tgttgatgtgtgcaagtgtgaattaaatgtctcacatccgataaaatagtaaagtttgaacaccttataagtaagagaatccataaa 47436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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