View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0499_high_1 (Length: 370)

Name: NF0499_high_1
Description: NF0499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0499_high_1
NF0499_high_1
[»] chr4 (71 HSPs)
chr4 (102-242)||(47720175-47720315)
chr4 (240-349)||(47853602-47853712)
chr4 (240-349)||(47720032-47720142)
chr4 (102-227)||(40622190-40622315)
chr4 (102-232)||(8530859-8530989)
chr4 (102-232)||(13628095-13628225)
chr4 (102-232)||(47557541-47557671)
chr4 (102-233)||(37701714-37701845)
chr4 (102-228)||(5272395-5272521)
chr4 (102-224)||(26870413-26870535)
chr4 (102-228)||(33503117-33503244)
chr4 (102-228)||(1944535-1944661)
chr4 (102-228)||(7643912-7644038)
chr4 (102-228)||(14829631-14829757)
chr4 (102-228)||(23478953-23479079)
chr4 (102-228)||(34056683-34056809)
chr4 (102-228)||(38007887-38008013)
chr4 (102-228)||(41984353-41984479)
chr4 (8-101)||(47720410-47720503)
chr4 (102-233)||(740525-740656)
chr4 (102-233)||(15520759-15520890)
chr4 (102-233)||(35495658-35495789)
chr4 (102-227)||(53342452-53342577)
chr4 (117-228)||(3839485-3839596)
chr4 (102-232)||(17740083-17740213)
chr4 (102-228)||(54331763-54331889)
chr4 (10-101)||(15520573-15520664)
chr4 (102-228)||(19831517-19831643)
chr4 (10-100)||(740752-740842)
chr4 (102-228)||(39742866-39742992)
chr4 (102-212)||(53991383-53991493)
chr4 (102-215)||(21353142-21353255)
chr4 (10-90)||(1944349-1944429)
chr4 (102-212)||(35707764-35707874)
chr4 (103-228)||(28135185-28135309)
chr4 (14-101)||(35707969-35708056)
chr4 (14-100)||(17739900-17739986)
chr4 (102-224)||(36857131-36857252)
chr4 (102-228)||(55998817-55998943)
chr4 (16-101)||(22116381-22116466)
chr4 (16-100)||(19831739-19831823)
chr4 (14-101)||(574488-574575)
chr4 (10-101)||(3839712-3839803)
chr4 (14-101)||(8530691-8530778)
chr4 (102-228)||(17699219-17699346)
chr4 (10-89)||(26870637-26870716)
chr4 (10-101)||(34056904-34056995)
chr4 (10-101)||(35495884-35495975)
chr4 (10-101)||(38007701-38007792)
chr4 (14-101)||(40622009-40622095)
chr4 (102-212)||(574283-574393)
chr4 (16-101)||(2776155-2776240)
chr4 (16-101)||(37701940-37702025)
chr4 (102-202)||(2776335-2776435)
chr4 (10-101)||(7644133-7644224)
chr4 (10-101)||(14829852-14829943)
chr4 (10-101)||(23478767-23478858)
chr4 (10-101)||(41984574-41984665)
chr4 (10-101)||(54331984-54332075)
chr4 (10-101)||(55999038-55999129)
chr4 (22-101)||(5272616-5272695)
chr4 (141-228)||(28973144-28973231)
chr4 (10-101)||(53342265-53342356)
chr4 (16-101)||(21352961-21353047)
chr4 (16-101)||(28135407-28135492)
chr4 (10-101)||(33503339-33503430)
chr4 (10-101)||(36856945-36857036)
chr4 (21-93)||(13627920-13627992)
chr4 (10-101)||(17699033-17699124)
chr4 (10-101)||(39743087-39743178)
chr4 (102-213)||(22116171-22116286)
[»] chr2 (61 HSPs)
chr2 (102-228)||(14753241-14753366)
chr2 (102-228)||(35286447-35286573)
chr2 (102-232)||(18092825-18092955)
chr2 (102-232)||(1515093-1515223)
chr2 (102-228)||(16724456-16724582)
chr2 (102-228)||(28380110-28380236)
chr2 (102-228)||(45398801-45398927)
chr2 (102-228)||(4811607-4811733)
chr2 (102-228)||(21097758-21097884)
chr2 (102-228)||(45205125-45205251)
chr2 (102-227)||(10821312-10821437)
chr2 (102-233)||(6342945-6343076)
chr2 (8-100)||(14753053-14753145)
chr2 (10-93)||(10821540-10821623)
chr2 (102-233)||(14323429-14323560)
chr2 (102-233)||(28502210-28502341)
chr2 (102-224)||(17091836-17091958)
chr2 (102-228)||(26821679-26821805)
chr2 (10-101)||(1993383-1993474)
chr2 (10-101)||(6343171-6343262)
chr2 (10-93)||(16883797-16883880)
chr2 (10-93)||(17025465-17025548)
chr2 (102-224)||(17025651-17025773)
chr2 (10-93)||(17037142-17037225)
chr2 (10-93)||(17041487-17041570)
chr2 (10-93)||(17091650-17091733)
chr2 (10-101)||(28502024-28502115)
chr2 (109-228)||(33663901-33664020)
chr2 (10-101)||(45398615-45398706)
chr2 (102-212)||(9916812-9916922)
chr2 (10-100)||(14323656-14323746)
chr2 (102-224)||(17037328-17037450)
chr2 (102-228)||(30566972-30567098)
chr2 (102-228)||(30570657-30570783)
chr2 (19-101)||(35286668-35286750)
chr2 (102-228)||(19167748-19167876)
chr2 (14-101)||(4811425-4811512)
chr2 (14-101)||(9917017-9917104)
chr2 (10-101)||(28380331-28380422)
chr2 (103-232)||(36633189-36633318)
chr2 (14-101)||(1515318-1515405)
chr2 (102-220)||(1993171-1993288)
chr2 (21-93)||(36633422-36633494)
chr2 (10-101)||(45205346-45205437)
chr2 (16-101)||(21097578-21097663)
chr2 (21-101)||(16724677-16724757)
chr2 (10-101)||(26821493-26821584)
chr2 (10-101)||(42885264-42885355)
chr2 (141-228)||(42885474-42885561)
chr2 (11-101)||(33664123-33664213)
chr2 (28-101)||(18093050-18093123)
chr2 (10-101)||(19167971-19168062)
chr2 (141-228)||(26827598-26827685)
chr2 (10-101)||(30567193-30567284)
chr2 (10-101)||(30570878-30570969)
chr2 (141-228)||(33907326-33907413)
chr2 (141-233)||(11706711-11706803)
chr2 (168-228)||(30572537-30572597)
chr2 (240-327)||(25205874-25205961)
chr2 (102-152)||(16883983-16884033)
chr2 (102-152)||(17041673-17041723)
[»] chr7 (60 HSPs)
chr7 (102-228)||(9226329-9226456)
chr7 (102-228)||(42827484-42827610)
chr7 (102-226)||(33638786-33638910)
chr7 (102-221)||(47174503-47174622)
chr7 (102-228)||(23766548-23766674)
chr7 (102-224)||(42996476-42996598)
chr7 (102-232)||(9149389-9149520)
chr7 (103-233)||(23299827-23299957)
chr7 (102-232)||(27735154-27735284)
chr7 (102-228)||(42244965-42245091)
chr7 (102-233)||(6911579-6911710)
chr7 (102-233)||(47573557-47573688)
chr7 (102-228)||(17477917-17478043)
chr7 (102-228)||(17575171-17575297)
chr7 (102-224)||(19521154-19521276)
chr7 (102-224)||(38434663-38434785)
chr7 (102-228)||(47163660-47163788)
chr7 (102-221)||(8926007-8926126)
chr7 (10-101)||(23300050-23300141)
chr7 (10-101)||(47174317-47174408)
chr7 (102-228)||(5962724-5962850)
chr7 (12-101)||(9226551-9226640)
chr7 (10-101)||(6911805-6911896)
chr7 (14-101)||(9149207-9149294)
chr7 (102-228)||(11499886-11500013)
chr7 (14-101)||(27735379-27735466)
chr7 (10-93)||(38434888-38434971)
chr7 (10-101)||(42827705-42827796)
chr7 (10-93)||(47163891-47163974)
chr7 (10-101)||(47573783-47573874)
chr7 (102-196)||(3795538-3795632)
chr7 (102-228)||(4481496-4481622)
chr7 (102-224)||(33030824-33030946)
chr7 (102-228)||(42687580-42687706)
chr7 (102-213)||(17469775-17469886)
chr7 (102-213)||(17583328-17583439)
chr7 (10-101)||(17482178-17482269)
chr7 (10-101)||(17570945-17571036)
chr7 (10-89)||(42996295-42996374)
chr7 (102-228)||(17482364-17482486)
chr7 (102-228)||(17570728-17570850)
chr7 (14-93)||(3795356-3795435)
chr7 (10-101)||(14308772-14308863)
chr7 (10-101)||(17477731-17477822)
chr7 (10-101)||(17575392-17575483)
chr7 (10-101)||(23766769-23766860)
chr7 (14-101)||(33639005-33639092)
chr7 (10-101)||(42245186-42245277)
chr7 (21-101)||(33030649-33030729)
chr7 (34-101)||(4481717-4481784)
chr7 (10-101)||(8926221-8926312)
chr7 (10-101)||(42687394-42687485)
chr7 (10-79)||(19521008-19521077)
chr7 (102-163)||(42917822-42917883)
chr7 (21-93)||(5962550-5962622)
chr7 (28-101)||(11499718-11499791)
chr7 (162-228)||(14308941-14309007)
chr7 (16-101)||(17469594-17469680)
chr7 (16-101)||(17583534-17583620)
chr7 (172-228)||(42917920-42917976)
[»] scaffold0051 (2 HSPs)
scaffold0051 (102-228)||(61320-61446)
scaffold0051 (8-101)||(49885-49978)
[»] chr1 (62 HSPs)
chr1 (102-228)||(12714509-12714635)
chr1 (102-232)||(52309866-52309996)
chr1 (102-228)||(12245933-12246059)
chr1 (102-228)||(18814251-18814377)
chr1 (102-228)||(34687619-34687745)
chr1 (102-232)||(51965821-51965951)
chr1 (102-228)||(13662498-13662624)
chr1 (102-228)||(34692147-34692273)
chr1 (102-228)||(41830142-41830267)
chr1 (102-228)||(16031696-16031823)
chr1 (10-101)||(16031918-16032009)
chr1 (102-233)||(43254772-43254903)
chr1 (102-233)||(50395186-50395317)
chr1 (102-228)||(31619721-31619847)
chr1 (102-228)||(36681276-36681401)
chr1 (102-228)||(41963022-41963148)
chr1 (102-232)||(47135432-47135562)
chr1 (102-228)||(48340361-48340487)
chr1 (103-228)||(52521660-52521785)
chr1 (105-228)||(28565808-28565934)
chr1 (102-233)||(18111618-18111749)
chr1 (19-101)||(12246154-12246236)
chr1 (11-101)||(17671153-17671243)
chr1 (102-228)||(17671488-17671614)
chr1 (102-228)||(45004765-45004890)
chr1 (10-101)||(18111432-18111523)
chr1 (10-101)||(43254998-43255089)
chr1 (10-101)||(50395412-50395503)
chr1 (11-93)||(15315097-15315179)
chr1 (121-223)||(15317298-15317400)
chr1 (102-196)||(29840811-29840905)
chr1 (14-99)||(52309684-52309769)
chr1 (13-101)||(36681093-36681181)
chr1 (14-101)||(10763232-10763319)
chr1 (10-93)||(12714323-12714406)
chr1 (10-93)||(13662727-13662810)
chr1 (102-233)||(24294561-24294692)
chr1 (102-233)||(39760237-39760368)
chr1 (102-212)||(10763414-10763524)
chr1 (11-93)||(28566040-28566122)
chr1 (11-101)||(45004580-45004670)
chr1 (102-232)||(50561074-50561202)
chr1 (102-202)||(44406407-44406507)
chr1 (14-101)||(29841000-29841087)
chr1 (10-101)||(31619535-31619626)
chr1 (10-101)||(48340175-48340266)
chr1 (29-101)||(24294394-24294466)
chr1 (102-202)||(38845351-38845451)
chr1 (10-101)||(18814065-18814156)
chr1 (10-101)||(34687433-34687524)
chr1 (10-101)||(41830362-41830453)
chr1 (16-101)||(34691967-34692052)
chr1 (103-212)||(42682419-42682527)
chr1 (140-224)||(28631382-28631466)
chr1 (14-101)||(50560892-50560979)
chr1 (14-101)||(51966046-51966132)
chr1 (10-101)||(52521881-52521972)
chr1 (14-101)||(42682240-42682323)
chr1 (16-101)||(44406227-44406312)
chr1 (21-101)||(38845537-38845617)
chr1 (21-101)||(41963243-41963323)
chr1 (242-327)||(26941330-26941415)
[»] chr3 (63 HSPs)
chr3 (102-228)||(35436862-35436988)
chr3 (102-228)||(8242723-8242849)
chr3 (101-228)||(54793070-54793197)
chr3 (102-228)||(23193491-23193617)
chr3 (102-228)||(52463037-52463163)
chr3 (102-232)||(55294880-55295010)
chr3 (102-228)||(21699678-21699804)
chr3 (102-232)||(40827136-40827266)
chr3 (103-228)||(32755540-32755665)
chr3 (102-228)||(36165115-36165242)
chr3 (102-228)||(16495913-16496039)
chr3 (102-228)||(35087943-35088069)
chr3 (102-228)||(48976707-48976833)
chr3 (102-233)||(39796573-39796704)
chr3 (102-228)||(50741376-50741502)
chr3 (102-228)||(50771352-50771478)
chr3 (102-228)||(54512801-54512927)
chr3 (9-101)||(36165337-36165429)
chr3 (102-233)||(5252474-5252605)
chr3 (102-233)||(6104227-6104357)
chr3 (10-100)||(32755323-32755413)
chr3 (13-100)||(2845184-2845271)
chr3 (102-232)||(11598064-11598195)
chr3 (10-101)||(39796799-39796890)
chr3 (14-101)||(48521348-48521435)
chr3 (102-228)||(52853549-52853673)
chr3 (10-93)||(54793299-54793382)
chr3 (102-228)||(31369122-31369248)
chr3 (102-232)||(48521123-48521253)
chr3 (10-99)||(8242537-8242626)
chr3 (10-101)||(5252700-5252791)
chr3 (14-101)||(11598290-11598377)
chr3 (10-93)||(16495727-16495810)
chr3 (14-101)||(40827361-40827448)
chr3 (10-93)||(54512616-54512699)
chr3 (102-212)||(22477731-22477841)
chr3 (102-228)||(49113089-49113215)
chr3 (12-101)||(23193301-23193390)
chr3 (14-101)||(55295105-55295192)
chr3 (102-212)||(11951096-11951206)
chr3 (14-101)||(22477549-22477636)
chr3 (10-101)||(31369343-31369434)
chr3 (10-101)||(52840859-52840950)
chr3 (16-101)||(6104452-6104537)
chr3 (14-99)||(19893699-19893784)
chr3 (16-101)||(35088164-35088249)
chr3 (16-101)||(48976527-48976612)
chr3 (10-101)||(49112912-49113003)
chr3 (10-101)||(50771573-50771664)
chr3 (14-99)||(11951303-11951388)
chr3 (21-101)||(50741201-50741281)
chr3 (105-196)||(11383144-11383235)
chr3 (141-228)||(16341717-16341804)
chr3 (14-101)||(52463258-52463345)
chr3 (11-101)||(52853768-52853858)
chr3 (8-101)||(11325970-11326063)
chr3 (10-101)||(51248198-51248289)
chr3 (102-179)||(51248384-51248461)
chr3 (10-101)||(21699899-21699988)
chr3 (8-51)||(35436731-35436774)
chr3 (240-327)||(1202167-1202254)
chr3 (102-142)||(52840724-52840764)
chr3 (58-101)||(11383004-11383047)
[»] chr6 (41 HSPs)
chr6 (102-224)||(4425515-4425637)
chr6 (102-228)||(1073376-1073502)
chr6 (102-228)||(18599099-18599225)
chr6 (102-232)||(33321562-33321692)
chr6 (102-232)||(14831493-14831623)
chr6 (102-228)||(14888051-14888176)
chr6 (102-228)||(25540081-25540207)
chr6 (102-228)||(22373954-22374080)
chr6 (102-228)||(2521172-2521299)
chr6 (102-228)||(17939530-17939656)
chr6 (102-228)||(34855963-34856089)
chr6 (102-214)||(11934807-11934919)
chr6 (102-222)||(15275666-15275786)
chr6 (10-101)||(13457178-13457269)
chr6 (102-228)||(4424494-4424620)
chr6 (143-228)||(1931987-1932072)
chr6 (102-233)||(13456953-13457083)
chr6 (14-101)||(14831311-14831398)
chr6 (10-101)||(28228845-28228936)
chr6 (102-228)||(34321100-34321227)
chr6 (102-213)||(35041116-35041227)
chr6 (10-101)||(14888271-14888362)
chr6 (14-101)||(33321787-33321874)
chr6 (10-100)||(11935015-11935105)
chr6 (102-212)||(18311814-18311924)
chr6 (10-101)||(1073597-1073688)
chr6 (8-101)||(1931853-1931939)
chr6 (10-101)||(17939344-17939435)
chr6 (10-101)||(18599320-18599411)
chr6 (8-101)||(22374175-22374268)
chr6 (16-101)||(35040936-35041021)
chr6 (10-101)||(15275480-15275571)
chr6 (10-101)||(34855777-34855868)
chr6 (16-101)||(18311635-18311719)
chr6 (141-228)||(30044255-30044342)
chr6 (11-93)||(2520986-2521068)
chr6 (14-93)||(34320918-34320997)
chr6 (16-101)||(4424314-4424399)
chr6 (240-327)||(19813245-19813332)
chr6 (240-327)||(32689535-32689622)
chr6 (58-101)||(25539943-25539986)
[»] chr5 (59 HSPs)
chr5 (102-228)||(33929784-33929910)
chr5 (102-232)||(33706878-33707008)
chr5 (102-228)||(41780818-41780944)
chr5 (104-228)||(290543-290663)
chr5 (102-228)||(33611243-33611369)
chr5 (102-228)||(7285667-7285793)
chr5 (102-228)||(30689299-30689425)
chr5 (102-228)||(2195155-2195281)
chr5 (102-228)||(3150707-3150833)
chr5 (102-228)||(3210303-3210429)
chr5 (102-228)||(4882262-4882388)
chr5 (102-232)||(20996043-20996173)
chr5 (102-228)||(26321178-26321304)
chr5 (102-224)||(9702242-9702364)
chr5 (102-228)||(20349913-20350039)
chr5 (102-233)||(19395346-19395477)
chr5 (102-233)||(31295772-31295903)
chr5 (102-224)||(3028744-3028866)
chr5 (102-228)||(3397241-3397367)
chr5 (19-101)||(33929607-33929689)
chr5 (104-228)||(1852032-1852157)
chr5 (102-213)||(17996570-17996681)
chr5 (10-101)||(31295998-31296089)
chr5 (102-228)||(19447993-19448119)
chr5 (102-220)||(27065862-27065980)
chr5 (10-93)||(9702056-9702139)
chr5 (12-101)||(41780634-41780723)
chr5 (14-101)||(12588604-12588691)
chr5 (102-213)||(20757951-20758062)
chr5 (10-101)||(21029912-21030003)
chr5 (16-93)||(20996276-20996353)
chr5 (16-101)||(38934287-38934372)
chr5 (17-101)||(19395167-19395251)
chr5 (10-101)||(3397462-3397553)
chr5 (10-101)||(7285481-7285572)
chr5 (10-101)||(10513425-10513516)
chr5 (102-228)||(21030098-21030225)
chr5 (102-212)||(12588400-12588509)
chr5 (22-91)||(3210534-3210603)
chr5 (16-101)||(17996390-17996475)
chr5 (16-101)||(33611464-33611549)
chr5 (21-101)||(3150928-3151008)
chr5 (10-101)||(1852254-1852345)
chr5 (10-101)||(26321399-26321490)
chr5 (141-228)||(35540022-35540109)
chr5 (102-213)||(38934467-38934578)
chr5 (102-179)||(10513253-10513330)
chr5 (10-93)||(2194969-2195052)
chr5 (10-93)||(4882077-4882160)
chr5 (10-101)||(19447807-19447898)
chr5 (10-93)||(20349727-20349810)
chr5 (141-228)||(34374483-34374570)
chr5 (16-101)||(20757771-20757856)
chr5 (10-101)||(3028555-3028645)
chr5 (10-101)||(30689113-30689204)
chr5 (10-58)||(287341-287389)
chr5 (10-101)||(27065704-27065793)
chr5 (8-51)||(290410-290453)
chr5 (171-228)||(10512467-10512524)
[»] scaffold0016 (1 HSPs)
scaffold0016 (102-228)||(100624-100750)
[»] chr8 (61 HSPs)
chr8 (102-232)||(41977227-41977357)
chr8 (102-231)||(12760243-12760372)
chr8 (102-232)||(6477582-6477712)
chr8 (102-224)||(12250296-12250418)
chr8 (102-228)||(14078923-14079049)
chr8 (102-228)||(29433807-29433933)
chr8 (102-228)||(39204399-39204525)
chr8 (102-224)||(39444789-39444911)
chr8 (102-220)||(41907625-41907743)
chr8 (102-233)||(23966608-23966739)
chr8 (102-219)||(22946904-22947021)
chr8 (102-231)||(41156407-41156536)
chr8 (102-233)||(37029606-37029737)
chr8 (102-228)||(22333214-22333340)
chr8 (102-228)||(38961937-38962063)
chr8 (102-228)||(38992281-38992407)
chr8 (102-228)||(41628659-41628785)
chr8 (102-228)||(45293670-45293796)
chr8 (102-227)||(19395657-19395782)
chr8 (8-101)||(41907438-41907531)
chr8 (103-228)||(30826220-30826349)
chr8 (102-233)||(6300705-6300836)
chr8 (102-228)||(33424352-33424477)
chr8 (12-92)||(39204215-39204295)
chr8 (10-101)||(6300931-6301022)
chr8 (10-101)||(23966834-23966925)
chr8 (10-101)||(37029420-37029511)
chr8 (10-101)||(42061108-42061199)
chr8 (102-233)||(44940210-44940341)
chr8 (11-101)||(44940025-44940115)
chr8 (110-228)||(42811030-42811148)
chr8 (10-89)||(12250520-12250599)
chr8 (10-93)||(23626666-23626749)
chr8 (10-101)||(29433621-29433712)
chr8 (10-89)||(39444608-39444687)
chr8 (14-101)||(41156225-41156312)
chr8 (102-233)||(42060883-42061013)
chr8 (17-101)||(41977048-41977132)
chr8 (14-101)||(12760061-12760148)
chr8 (10-101)||(14079144-14079235)
chr8 (10-101)||(19247694-19247785)
chr8 (10-101)||(19320878-19320969)
chr8 (16-101)||(23522956-23523041)
chr8 (102-228)||(19247880-19248002)
chr8 (102-228)||(19321064-19321186)
chr8 (22-101)||(19395877-19395956)
chr8 (102-213)||(23522750-23522861)
chr8 (10-101)||(30826033-30826124)
chr8 (10-101)||(45293891-45293982)
chr8 (102-224)||(23626441-23626563)
chr8 (11-101)||(33424572-33424662)
chr8 (10-101)||(22333435-22333526)
chr8 (141-228)||(38993490-38993577)
chr8 (141-228)||(44599509-44599596)
chr8 (23-101)||(41628486-41628564)
chr8 (49-101)||(22947116-22947168)
chr8 (10-101)||(42811250-42811341)
chr8 (10-79)||(6477828-6477897)
chr8 (10-101)||(38961757-38961848)
chr8 (10-101)||(38992101-38992192)
chr8 (16-46)||(44383309-44383339)
[»] scaffold0088 (2 HSPs)
scaffold0088 (102-224)||(53077-53199)
scaffold0088 (42-89)||(53301-53348)
[»] scaffold0079 (2 HSPs)
scaffold0079 (102-232)||(10711-10841)
scaffold0079 (48-101)||(10936-10989)
[»] scaffold0095 (2 HSPs)
scaffold0095 (102-224)||(1358-1480)
scaffold0095 (12-89)||(1179-1256)
[»] scaffold0047 (2 HSPs)
scaffold0047 (102-228)||(26465-26591)
scaffold0047 (10-101)||(26686-26777)
[»] scaffold0006 (4 HSPs)
scaffold0006 (102-228)||(152260-152386)
scaffold0006 (102-228)||(64739-64865)
scaffold0006 (10-90)||(64971-65051)
scaffold0006 (10-93)||(152489-152572)
[»] scaffold0005 (2 HSPs)
scaffold0005 (102-228)||(9952-10078)
scaffold0005 (10-101)||(9766-9857)
[»] scaffold0122 (2 HSPs)
scaffold0122 (102-228)||(442-568)
scaffold0122 (10-101)||(256-347)
[»] scaffold0045 (2 HSPs)
scaffold0045 (102-228)||(13036-13162)
scaffold0045 (14-101)||(13257-13344)
[»] scaffold0010 (1 HSPs)
scaffold0010 (10-100)||(119878-119968)
[»] scaffold0171 (2 HSPs)
scaffold0171 (102-227)||(30103-30228)
scaffold0171 (10-101)||(30323-30414)
[»] scaffold0038 (1 HSPs)
scaffold0038 (10-101)||(29343-29434)
[»] scaffold0236 (1 HSPs)
scaffold0236 (102-232)||(26509-26639)
[»] scaffold0385 (2 HSPs)
scaffold0385 (20-101)||(4505-4586)
scaffold0385 (102-202)||(4308-4410)
[»] scaffold1891 (1 HSPs)
scaffold1891 (102-176)||(41-115)
[»] scaffold0110 (1 HSPs)
scaffold0110 (141-228)||(49340-49427)
[»] scaffold0242 (1 HSPs)
scaffold0242 (141-228)||(3559-3646)


Alignment Details
Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 47720315 - 47720175
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||    
T  47720315 cttttcattttgtctgatgtaaatattggaaaaaattcatttttggttagtctacgacacttgcagtctcttttataaatctaactattatgtgatgtta 47720216  T
Q  202 acatgcacattgttggttccttcattgattcatgcaagtat 242  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  47720215 atatgcacattgttggttccttcattgattcatgcaagtat 47720175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 240 - 349
Target Start/End: Original strand, 47853602 - 47853712
Alignment:
Q  240 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtgagcca-atacttc 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  47853602 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtgagctagatacttc 47853701  T
Q  339 ctttgatgatg 349  Q
    |||||||||||    
T  47853702 ctttgatgatg 47853712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 240 - 349
Target Start/End: Complemental strand, 47720142 - 47720032
Alignment:
Q  240 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtgagcca-atacttc 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||    
T  47720142 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacagaaggaggttgtgagccagatacttc 47720043  T
Q  339 ctttgatgatg 349  Q
    |||||||||||    
T  47720042 ctttgatgatg 47720032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 40622190 - 40622315
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  40622190 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 40622289  T
Q  202 acatgcacattgttggttccttcatt 227  Q
    | ||||||||||||||||| ||||||    
T  40622290 atatgcacattgttggttcattcatt 40622315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 8530859 - 8530989
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||| ||||||  |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  8530859 cttttcattttgtctgatgtacatattgacaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaatgtta 8530958  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  |||||||||||| |||||||||||||||    
T  8530959 atctgcacattgttgattccttcattgattc 8530989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 13628095 - 13628225
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||| || |||||||||| ||||||||||||||| ||||    
T  13628095 cttttcattttgtctaatgtaaatattggcaaaaattcctttttggttagtctatgaaacttgcaatcacttttataaacctaactattatgtaacgtta 13628194  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  ||||||||||||||||||||||||||||    
T  13628195 atttgcacattgttggttccttcattgattc 13628225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 47557671 - 47557541
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||| || ||| |||||||| ||||    
T  47557671 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctgactgttatgtaacgtta 47557572  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  ||||||||||||||||||||||||||||    
T  47557571 atctgcacattgttggttccttcattgattc 47557541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 37701845 - 37701714
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  37701845 cttttcattttgtctgatgtaaatattgaaaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 37701746  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||||||||||||||||||| ||||    
T  37701745 atctgcacattgttggttccttcattggttca 37701714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 5272521 - 5272395
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  5272521 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 5272422  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  5272421 atctgtacattgttggttccttcattg 5272395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 26870535 - 26870413
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  26870535 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 26870436  T
Q  202 acatgcacattgttggttccttc 224  Q
    | |||||||||||||||||||||    
T  26870435 atatgcacattgttggttccttc 26870413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 33503244 - 33503117
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcc-tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 200  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||| |||    
T  33503244 cttttcattttgtctgatgtaaatattggaaaaaaatccctttttcgttagtctatgacacttgcaatctcttttataaacctaactattatgtaacgtt 33503145  T
Q  201 aacatgcacattgttggttccttcattg 228  Q
    ||  ||||||||||||||||||||||||    
T  33503144 aatctgcacattgttggttccttcattg 33503117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 1944535 - 1944661
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||| |||| ||||| |||||||||||||||| ||||||||||||||| ||||    
T  1944535 cttttcattttgtctgatgtaaatattgacaaaaatccctttttggttagtttatgacacttacagtctcttttataaacctaactattatgtaacgtta 1944634  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||||||||||| |||||||    
T  1944635 atctgcacattgttggttctttcattg 1944661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 7644038 - 7643912
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||  ||||||| ||||||||||| | ||||||||||||||| ||||    
T  7644038 cttttcattttgtctgatgtaaatattggcaaaacttccgttttggttagtctatgaaacttgcaatctcttttatagacctaactattatgtaacgtta 7643939  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  7643938 atctgcacattgttggttccttcattg 7643912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 14829757 - 14829631
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  14829757 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 14829658  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||| ||||||||    
T  14829657 atctgtacattgttggtttcttcattg 14829631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 23478953 - 23479079
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  23478953 cttttcattttgtctgatgtaagtattggcaaaaattcccttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 23479052  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  23479053 atctgtacattgttggttccttcattg 23479079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 34056809 - 34056683
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  34056809 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttaatctatgaaacttgcaatctcttttataaaactaactattatgtaacgtta 34056710  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  34056709 atctgtacattgttggttccttcattg 34056683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 38007887 - 38008013
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  38007887 cttttcattttgtctgatgtaaatattggcaaaaattcctttttggttagcctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 38007986  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||  ||||||||||||||||||||    
T  38007987 atctgttcattgttggttccttcattg 38008013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 41984479 - 41984353
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||| |||||||||||||||  |||||||||||||| ||||    
T  41984479 cttttcattttgtctgatgtaaatattggcaaaaatccttttttggttagtctatgacacttgtagtctcttttataaacttaactattatgtaacgtta 41984380  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||| ||||||||    
T  41984379 atctgcacattgttggtttcttcattg 41984353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 47720503 - 47720410
Alignment:
Q  8 cagcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47720503 cagcagagaacgtgtgatggaagaaggtggtaagcttatctttgatctcgaaaagtcatcaaagaacttgcacgttcgagttgttcaaaagtag 47720410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 740656 - 740525
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  740656 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 740557  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||| ||||||||||||||| ||||    
T  740556 atctgcacattattggttccttcattggttca 740525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 15520759 - 15520890
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  15520759 cttttcattttgtctgatgtaaatattgacaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 15520858  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||||||||||||||||||| ||||    
T  15520859 atctgcacattgttggttccttcattggttca 15520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 35495789 - 35495658
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  35495789 cttttcattttgtctgatgtaaatattgacaaaaatacctttttggttagtatatgaaacttgcaatctcttttataaacctaactattatgtaaagtta 35495690  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||  ||||||||||||||||||||    
T  35495689 atctgcacataattggttccttcattgattca 35495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 53342452 - 53342577
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  53342452 cttttcattttgtctgatgtaaatattagcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 53342551  T
Q  202 acatgcacattgttggttccttcatt 227  Q
    |  || ||||||||| ||||||||||    
T  53342552 atttgtacattgttgattccttcatt 53342577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 3839596 - 3839485
Alignment:
Q  117 gatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttg 216  Q
    |||||||||||||| ||||||||||||||||||||||||||   |||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  3839596 gatgtaaatattggcaaaaattcctttttggttagtctatgattcttgcaatctcttttataaacctaactattatgtaacgttaatctgcacattgttg 3839497  T
Q  217 gttccttcattg 228  Q
    ||||||||||||    
T  3839496 gttccttcattg 3839485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 17740083 - 17740213
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| | ||||| ||||||||  |||||| ||||||||||||||||||| |||||| ||||| ||||||||| ||||||||| ||||| ||||    
T  17740083 cttttcattttatttgatgcaaatattgacaaaaatccctttttggttagtctatgacacttgtagtcttttttataaacctaactattttgtaacgtta 17740182  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  ||||||||||||||||||||||||||||    
T  17740183 atctgcacattgttggttccttcattgattc 17740213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 54331889 - 54331763
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| |||||| | |||||||||||||||||  ||||||| ||||||||||||| ||||| |||| |||| ||||    
T  54331889 cttttcattttgtctgatgtaagtattggcaaaaatccatttttggttagtctatgaaacttgcaatctcttttataaacctaacaattacgtaacgtta 54331790  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  54331789 atctgcacattgttggttccttcattg 54331763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 15520573 - 15520664
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  15520573 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 15520664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 19831643 - 19831517
Alignment:
Q  102 cttttcattttgtct-gatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 200  Q
    ||||| ||||||||| |||||||||||||  ||||||| ||||||||||||||||||  ||||||| |||||||||| || |||||||||||||||||||    
T  19831643 ctttttattttgtcttgatgtaaatattgacaaaaatttctttttggttagtctatgaaacttgcaatctcttttat-aacctaactattatgtaatgtt 19831545  T
Q  201 aacatgcacattgttggttccttcattg 228  Q
    ||  ||||||||||||||||||||||||    
T  19831544 aatctgcacattgttggttccttcattg 19831517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 740842 - 740752
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 100  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  740842 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagta 740752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 39742992 - 39742866
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||| |||||||| | |||||||||| |||||| ||||||||||||||| |||  ||||||| ||||||||||||| || |||||||||||| ||||    
T  39742992 cttttcagtttgtctggtataaatattggcaaaaatccctttttggttagtcaatgaaacttgcaatctcttttataaacctgactattatgtaacgtta 39742893  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  39742892 atctgcacattgttggttccttcattg 39742866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 53991493 - 53991383
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  53991493 cttttcattttatctgatgtaaatattagcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 53991394  T
Q  202 acatgcacatt 212  Q
    |  ||||||||    
T  53991393 atctgcacatt 53991383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 21353142 - 21353255
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  21353142 cttttcattttgtctaatgtaaatattggcaaaaatccctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 21353241  T
Q  202 acatgcacattgtt 215  Q
    |  |||||||||||    
T  21353242 atctgcacattgtt 21353255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 1944349 - 1944429
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttg 90  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  1944349 gcagaaaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcatcgaagaacttgcacgtttgagttg 1944429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 35707874 - 35707764
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  35707874 cttttcattttatctgatgtaaatattagcaaaaatccctttttggttggtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 35707775  T
Q  202 acatgcacatt 212  Q
    |  ||||||||    
T  35707774 atctgcacatt 35707764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 28135309 - 28135185
Alignment:
Q  103 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 202  Q
    |||||||| |||||| |||||||||||| |||||| |||||| ||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| |||||    
T  28135309 ttttcattgtgtctggtgtaaatattggcaaaaatccctttt-ggttagtttatgaaacttgcaatctcttttataaacctaactattatgtaacgttaa 28135211  T
Q  203 catgcacattgttggttccttcattg 228  Q
      |||||||||||||||| |||||||    
T  28135210 tctgcacattgttggttctttcattg 28135185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 35708056 - 35707969
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  35708056 agaacgtgtgatggaagaaggtggtatgctcatctttgatttcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 35707969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 17739900 - 17739986
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 100  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||||| ||||||    
T  17739900 agaatgtgtgatggaagaaggtggtaagctcatatttgatctggaaaagtcaccgaagaacatgcatgttcgagttgttccaaagta 17739986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 36857131 - 36857252
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| |||||| |||||| ||||||  ||||||||||||||||||  |||| || ||||||||||||| ||||||||||||||| ||||    
T  36857131 cttttcattttgtctaatgtaagtattggcaaaaatctctttttggttagtctatgaaacttacaatctcttttataaacctaactattatgtaacgtta 36857230  T
Q  202 acatgcacattgttggttccttc 224  Q
    |  | ||||||||||||||||||    
T  36857231 a-tttcacattgttggttccttc 36857252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 55998943 - 55998817
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||  |||||||||||  |||||| |||||||||||||| ||||  ||||||| |||||||||||||  |||||||||||| |  |||    
T  55998943 cttttcattttgtctagtgtaaatattgacaaaaatccctttttggttagtatatgaaacttgcaatctcttttataaacttaactattatgttaaatta 55998844  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  55998843 atctgcacattgttggttccttcattg 55998817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 22116466 - 22116381
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  22116466 aacgagtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 22116381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 19831823 - 19831739
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||||||||| ||||||    
T  19831823 aacgagtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagta 19831739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 574575 - 574488
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||||| ||| ||||||||||||| ||||||||||||| |||||||    
T  574575 agaacatgtgatggaagaaggtggtaagctcatctttgatttcgaaaaatcaccgaagaacttgcatgttcgagttgttccaaagtag 574488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 3839803 - 3839712
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| ||||| |||||||||||||||| |||||||    
T  3839803 gcagagagcgtgtgatggaagaaggtggtaagctcatctttgatctggaaaattcaccgaaaaacttccacgttcgagttgttccaaagtag 3839712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 8530691 - 8530778
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||    
T  8530691 agaacgtgtgatggaagaaagtggtaagttcatctttgatctcgaaaattcaccgaagaacttgcatgttcgagttgttccaaagtag 8530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 17699219 - 17699346
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcc-tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 200  Q
    |||||||||||||||| | |||||||||  |||||  || |||||||||||||||||  ||||||| |||||||||||||  |||||||||||||| |||    
T  17699219 cttttcattttgtctggtttaaatattgataaaaaaaccctttttggttagtctatgaaacttgcaatctcttttataaacataactattatgtaacgtt 17699318  T
Q  201 aacatgcacattgttggttccttcattg 228  Q
    ||  |||||||| |||||||||||||||    
T  17699319 aatctgcacatttttggttccttcattg 17699346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 26870716 - 26870637
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagtt 89  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| ||||||||    
T  26870716 gcagagaacgtgtcatggaagaaggtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcacattcgagtt 26870637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 34056995 - 34056904
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  34056995 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 34056904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 35495975 - 35495884
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||  ||||||||||||||||||||    
T  35495975 gcagataacgagtgatggaagaaggtggtaaactcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttcaaaagtag 35495884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 38007701 - 38007792
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  38007701 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 38007792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 40622009 - 40622095
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  40622009 agaacatgtgatggaagaaggtggtaa-ctcatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 40622095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 574393 - 574283
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| |||||||||||||||   |||||||||||||| ||||||||||| |||||||||||| ||  ||||| ||||||||||||||| ||||    
T  574393 cttttcattttatctgatgtaaatattatcaaaaattcctttttagttagtctatgacacttgcagtcttttaaataaacctaactattatgtaacgtta 574294  T
Q  202 acatgcacatt 212  Q
    |  ||||||||    
T  574293 atctgcacatt 574283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 2776155 - 2776240
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||  |||||||||||| |||||||    
T  2776155 aacgagtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcacagaagaaattgcaaattcgagttgttccaaagtag 2776240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 37702025 - 37701940
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  37702025 aacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 37701940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 2776335 - 2776435
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||| |||||| |||  ||||||| ||||||||||||| ||||||||| ||||| ||||    
T  2776335 cttttcattttgtctaatgtaaatattggcaaaaatccctttttgattagtcaatgaaacttgcaatctcttttataaacctaactattttgtaacgtta 2776434  T
Q  202 a 202  Q
    |    
T  2776435 a 2776435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 7644224 - 7644133
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  7644224 gcagataacgagtgatggaagaaggtggtaaactcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 7644133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 14829943 - 14829852
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| ||||||| |||||||||||||||||| ||||||||| ||||||||  |||||||||||| ||||||||||||| |||||||    
T  14829943 gcagataacgagtgatgggagaaggtggtaagctcatctttgatctcaaaaagtcacagaagaacttgcaagttcgagttgttccaaagtag 14829852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 23478767 - 23478858
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||  |||||||||||| |||||||    
T  23478767 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacaaaagaacttgcaaattcgagttgttccaaagtag 23478858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 41984665 - 41984574
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||| |||||| |||||||||| ||||||||||  ||||||| ||||||||| ||| ||||||||||||||||||||||| |||||||    
T  41984665 gcagagaaagtgtgaaggaagaaggtagtaagctcatcattgatcttgaaaagtcaccgatgaacttgcacgttcgagttgttccaaagtag 41984574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 54332075 - 54331984
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||| ||||||||  ||||||||||||  |||||||||||| |||||||    
T  54332075 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcaaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 54331984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 55999129 - 55999038
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  55999129 gcagataacgagtgatagaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 55999038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 5272695 - 5272616
Alignment:
Q  22 tgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||  |||||||||||| |||||||    
T  5272695 tgatggaagaaggtggtaagctcatctttgatctcgaaaagtcgcagaagaacttgcaaattcgagttgttccaaagtag 5272616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 28973144 - 28973231
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||| ||||||||||   ||||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  28973144 tttttagttagtctattaaacttgcaatctcttttataaacctaactattatgtaacgttaatctgcacattgttggttccttcattg 28973231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 53342265 - 53342356
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||| ||||||||||| ||||||||||| ||||||  ||||||||||||  |||||||||||| |||||||    
T  53342265 gcagataacgagtgatggaagaaggaggtaagctcatctttgatctcgagaagtcacagaagaacttgcaaattcgagttgttccaaagtag 53342356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 21352961 - 21353047
Alignment:
Q  16 aacgtgtgatggaa-gaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| ||||||||| ||||||||||||| ||||||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  21352961 aacgagtgatggaaagaaggtggtaagcccatatttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 21353047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 28135492 - 28135407
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||||||  ||||||||| ||  |||||||||||| |||||||    
T  28135492 aacgagtgatggaagaagttggtaagctcatctttgatctcgaaaagtcacagaagaacttacaaattcgagttgttccaaagtag 28135407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 33503430 - 33503339
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||| ||||||||| |||||| |||||||||||   |||||||||||  |||||||||||| |||||||    
T  33503430 gcagataacgagtgatggaagaaggtgataagctcatctttgatttcgaaaagtcacataagaacttgcaaattcgagttgttccaaagtag 33503339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 36856945 - 36857036
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||| ||||||||||||| |||||| |||||||||||   |||||||||||  |||||||||||| |||||||    
T  36856945 gcagataacgagtgatggaagaaagtggtaagctcatctttgatatcgaaaagtcacaaaagaacttgcaaattcgagttgttccaaagtag 36857036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 13627920 - 13627992
Alignment:
Q  21 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||| |  ||||||||||||    
T  13627920 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagacacagaagaacttgaaaattcgagttgttc 13627992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 17699033 - 17699124
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| ||||| ||||||||| |||||||||| ||||||||||||||||||  ||| |||| |||  |||||||||||| |||||||    
T  17699033 gcagataacgagtgatagaagaaggtagtaagctcatctttgatctcgaaaagtcacagaaaaactagcaaattcgagttgttccaaagtag 17699124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 39743178 - 39743087
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||   |||||||||||  ||  |||||||| |||||||    
T  39743178 gcagataacgagtggtggaagaaggtggtaagctcatctttgatctcgaaaagtcacaaaagaacttgcaaatttaagttgttccaaagtag 39743087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 22116286 - 22116171
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtc----tcttttataaatctaactattatgtaat 197  Q
    ||||||||||||||| ||||||||||||| |||||  ||||||||||||||| |||  ||||||| ||    | |||| | || |||||||||||||||     
T  22116286 cttttcattttgtctaatgtaaatattggcaaaaacccctttttggttagtcaatgaaacttgcaatcccttttttttttgaacctaactattatgtaac 22116187  T
Q  198 gttaacatgcacattg 213  Q
    |||||  |||||||||    
T  22116186 gttaatctgcacattg 22116171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 6e-56; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 14753241 - 14753366
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14753241 cttttcattttgtctgatgtaaatattgggaaaaattc-tttttggttagtctatgacacttgcagtctcttttataaatctaactattatgtaatgtta 14753339  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    | |||||||||||||||||||||||||    
T  14753340 atatgcacattgttggttccttcattg 14753366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 35286573 - 35286447
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  35286573 cttttcattttgtctgatgtaaatattgacaaaaatccctttttggttagtctatgacacttgcattctcttttataaatctaactattatgtaacgtta 35286474  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  35286473 atctgcacattgttggttccttcattg 35286447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 18092955 - 18092825
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||| | | ||||||||| ||||||||||||||| ||||    
T  18092955 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcaatattttttataaacctaactattatgtaacgtta 18092856  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  ||||||||||||||||||||||||||||    
T  18092855 atctgcacattgttggttccttcattgattc 18092825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 1515223 - 1515093
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| |||||||||| | ||| |||||| ||||||||| |||||| |||| ||||||||    
T  1515223 cttttcattttgtctgatgtaaatattggcaaaaatccctttttgattagtctatgactcttacagtcttttttataaacctaactgttatttaatgtta 1515124  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    | |||||||||||||||||||||||||||||    
T  1515123 atatgcacattgttggttccttcattgattc 1515093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 16724582 - 16724456
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  16724582 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 16724483  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  16724482 atctgtacattgttggttccttcattg 16724456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 28380236 - 28380110
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||| ||||||| ||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  28380236 cttttcactttgtctaatgtaaatattggcaaaaatccttttttggttagtctatgacacttgcagtctcttttataaatctaactattatgtaacgtta 28380137  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||||||||||| |||||||    
T  28380136 atctgcacattgttggttcattcattg 28380110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 45398801 - 45398927
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||| ||||||| ||||||||||||| |||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  45398801 cttttcactttgtctaatgtaaatattggcaaaaattcttttttgattagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 45398900  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  45398901 atctgcacattgttggttccttcattg 45398927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 4811607 - 4811733
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| ||||    
T  4811607 cttttcattttgtctaatgtagatattggcaaaaatccctttttggttagtctatgacacttgcagtctcttttataaacctatttattatgtaacgtta 4811706  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  4811707 atctgcacattgttggttccttcattg 4811733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 21097758 - 21097884
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  21097758 cttttcattttgtctgatgtaagtattgacaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaaactaactattatgtaacgtta 21097857  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  21097858 atctgtacattgttggttccttcattg 21097884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 45205251 - 45205125
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| |||     
T  45205251 cttttcattttgtctgatgtaaatattgacaaaaatacctttttggttagtctatgacacttgcagtctcttttataaacctaattattatgtaacgttg 45205152  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||| |||||||||||||||    
T  45205151 atctgcacattattggttccttcattg 45205125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 10821437 - 10821312
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||| |||| |||||| ||||||||||||||| ||||||||||||||  ||||    
T  10821437 cttttcattttgtctgatgtaaatattgacaaaaatccctttttggttagtttatgacacttgaagtctcttttataaacctaactattatgtagcgtta 10821338  T
Q  202 acatgcacattgttggttccttcatt 227  Q
    |  |||||||||||||||||||||||    
T  10821337 atctgcacattgttggttccttcatt 10821312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 6343076 - 6342945
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  6343076 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 6342977  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  | |||||||||||||||||||||| ||||    
T  6342976 atctacacattgttggttccttcattggttca 6342945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 14753053 - 14753145
Alignment:
Q  8 cagcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 100  Q
    |||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14753053 cagcagagaactagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttccaaagta 14753145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 10821623 - 10821540
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10821623 gcagagaacgtgtgatggaagaaggtggtaagttcatctttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 10821540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 14323560 - 14323429
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  14323560 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 14323461  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||| ||| ||||||||||||||| ||||    
T  14323460 atctgcatattattggttccttcattggttca 14323429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 28502210 - 28502341
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  28502210 cttttcattttgtctgatgtaaatattgacaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 28502309  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  ||||||||||||||||||| |||| ||||    
T  28502310 atctgcacattgttggttcctttattggttca 28502341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 17091836 - 17091958
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| | ||||||||||||| ||||||||||| ||| ||||    
T  17091836 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgaaatctcttttataaacctaactattatataacgtta 17091935  T
Q  202 acatgcacattgttggttccttc 224  Q
    |  ||||||||||||||||||||    
T  17091936 atctgcacattgttggttccttc 17091958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 26821679 - 26821805
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||  ||||||| ||||||||||||| | ||| ||||||||| ||||    
T  26821679 cttttcattttgtctgatgtaagtattggcaaaaattcatttttggttagtctatgaaacttgcaatctcttttataaaccaaacaattatgtaacgtta 26821778  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  | ||||||||||||||||||||||    
T  26821779 atctacacattgttggttccttcattg 26821805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 1993474 - 1993383
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  1993474 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 1993383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 6343262 - 6343171
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  6343262 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 6343171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 16883797 - 16883880
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  16883797 gcagagaacgtgtgatggaagaaggtggtaagctcatctttgatctcggaaagtcaccgaagaacttgcacgttcgagttgttc 16883880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 17025465 - 17025548
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  17025465 gcagagaacgtgtcatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttc 17025548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 17025651 - 17025773
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| | ||| ||||||||| ||||||||||| ||| ||||    
T  17025651 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgtaatctnttttataaacctaactattatataacgtta 17025750  T
Q  202 acatgcacattgttggttccttc 224  Q
    |  ||||||||||||||||||||    
T  17025751 atctgcacattgttggttccttc 17025773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 17037142 - 17037225
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  17037142 gcagagaacgtgtcatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttc 17037225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 17041487 - 17041570
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  17041487 gcagagaacgtgtgatggaagaaggtggtaagctcatctttgatctcggaaagtcaccgaagaacttgcacgttcgagttgttc 17041570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 17091650 - 17091733
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  17091650 gcagagaacgtgtcatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttc 17091733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 28502024 - 28502115
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  28502024 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 28502115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 33664020 - 33663901
Alignment:
Q  109 ttttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgca 208  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||||||  ||||| | ||||||||||||| ||||||||||||||| |||||  ||||    
T  33664020 ttttttctgatgtaaatattggcaaaaatccctttttggttagtctatgaaacttgtaatctcttttataaacctaactattatgtaacgttaatctgca 33663921  T
Q  209 cattgttggttccttcattg 228  Q
    |||||||||||| |||||||    
T  33663920 cattgttggttcattcattg 33663901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 45398615 - 45398706
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||||||| |||||  |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  45398615 gcagagaacgtgtgatggaagaaggtggtacgctcaactttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagtag 45398706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 9916922 - 9916812
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||| | ||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  9916922 cttttcattttatctgatgtaaatattagcaaaaatctctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaatgtta 9916823  T
Q  202 acatgcacatt 212  Q
    |  ||||||||    
T  9916822 atctgcacatt 9916812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 14323746 - 14323656
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 100  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  14323746 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagta 14323656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 17037328 - 17037450
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| | ||| ||||||||| ||||||||||| ||| ||||    
T  17037328 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgtaatctattttataaacctaactattatataacgtta 17037427  T
Q  202 acatgcacattgttggttccttc 224  Q
    |  ||||||||||||||||||||    
T  17037428 atctgcacattgttggttccttc 17037450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 30567098 - 30566972
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||  ||||| |||||||||||| ||||||  ||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||||| ||||    
T  30567098 cttttcattgcgtctggtgtaaatattggcaaaaatctctttttggttagtctatgaaacttgcaatctcttttataaacccaactattatgtaacgtta 30566999  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  30566998 atctgcacattgttggttccttcattg 30566972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 30570783 - 30570657
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||  ||||| |||||||||||| ||||||  ||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||||| ||||    
T  30570783 cttttcattgcgtctggtgtaaatattggcaaaaatctctttttggttagtctatgaaacttgcaatctcttttataaacccaactattatgtaacgtta 30570684  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  30570683 atctgcacattgttggttccttcattg 30570657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 35286750 - 35286668
Alignment:
Q  19 gtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  35286750 gtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacggaagaacttgcacgttcgagttgttcaaaagtag 35286668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 19167876 - 19167748
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaa--ttcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgt 199  Q
    |||||||||||||||| |||||||||||| |||||  | ||||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||  ||    
T  19167876 cttttcattttgtctggtgtaaatattggaaaaaaaatcccttttttgttagtctatgaaacttgcaatctcttttataaacctaactattatgtatcgt 19167777  T
Q  200 taacatgcacattgttggttccttcattg 228  Q
    |||  ||||||||||||||||||||||||    
T  19167776 taatctgcacattgttggttccttcattg 19167748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 4811425 - 4811512
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||| |||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  4811425 agaacgtgcgatggaagaaggtggtaagctcatctctgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 4811512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 9917104 - 9917017
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  9917104 agaacgtgtgatggaagaaggtggtaagctcatctttgatttcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 9917017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 28380422 - 28380331
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||| ||||||||||||||||||||| |||||  |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  28380422 gcagagaaagtgtgatggaagaaggtggtacgctcaactttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagtag 28380331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 103 - 232
Target Start/End: Complemental strand, 36633318 - 36633189
Alignment:
Q  103 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 202  Q
    |||||||| |||||||||||| |||||| |||||| | |||||||||| ||| || ||||| || ||||||||||||| ||||||| ||| ||| |||||    
T  36633318 ttttcattctgtctgatgtaagtattggcaaaaatccatttttggttaatctttgacacttacaatctcttttataaacctaactactatataacgttaa 36633219  T
Q  203 catgcacattgttggttccttcattgattc 232  Q
      ||||||||||||||||||||||||||||    
T  36633218 tctgcacattgttggttccttcattgattc 36633189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 1515405 - 1515318
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||| ||||||||| |||||||    
T  1515405 agaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcatgtttgagttgttccaaagtag 1515318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 1993288 - 1993171
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  1993288 cttttcattttgtct-atgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 1993190  T
Q  202 acatgcacattgttggttc 220  Q
    |  |||||||| |||||||    
T  1993189 atctgcacattattggttc 1993171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 36633494 - 36633422
Alignment:
Q  21 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  36633494 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcacgttcgagttgttc 36633422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 45205437 - 45205346
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||||  ||||||||||| |||||||||||||| |||||||    
T  45205437 gcagagaacgagtgatggaagaaggtggtaagttcatctttgatctcaaaaagtcacagaagaacttgcgcgttcgagttgttccaaagtag 45205346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 21097578 - 21097663
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  21097578 aacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 21097663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 16724757 - 16724677
Alignment:
Q  21 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  16724757 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 16724677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 26821493 - 26821584
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||   ||||||||||| |||||||    
T  26821493 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaagtcgagttgttccaaagtag 26821584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 42885264 - 42885355
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  42885264 gcagataacgagtgatggaagatggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttctaaagtag 42885355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 42885474 - 42885561
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    |||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||||  |||| |||||||||||||||||||    
T  42885474 tttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgttaatctgcatattgttggttccttcattg 42885561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 33664213 - 33664123
Alignment:
Q  11 cagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||| |||||||||||||||||||| |||||  |||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  33664213 cagagaacgagtgatggaagaaggtggtaaactcatccttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 33664123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 18093123 - 18093050
Alignment:
Q  28 aagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  18093123 aagaaggtgttaagctcatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 18093050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 19168062 - 19167971
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| ||||  |||||||||||||||||||||||||||||| ||||||||  ||||||||||||  |||||||||||| |||||||    
T  19168062 gcagataacgagtgacagaagaaggtggtaagctcatatttgatctcaaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 19167971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 26827598 - 26827685
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||| |||||||||||  ||||||| ||||||||||||| |||||||||||||||  ||||  ||||||||||||||||||||||||    
T  26827598 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacattaatctgcacattgttggttccttcattg 26827685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 30567284 - 30567193
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| ||||| |||||||||||||||||||| ||||||||||||||| ||  ||||||||||||  |||||||||||| |||||||    
T  30567284 gcagataacgagtgattgaagaaggtggtaagctcatctttgatctcgaaaagacacagaagaacttgcaaattcgagttgttccaaagtag 30567193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 30570969 - 30570878
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| ||||| |||||||||||||||||||| ||||||||||||||| ||  ||||||||||||  |||||||||||| |||||||    
T  30570969 gcagataacgagtgattgaagaaggtggtaagctcatctttgatctcgaaaagacacagaagaacttgcaaattcgagttgttccaaagtag 30570878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 33907326 - 33907413
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||||  |||| |||||||||||||||||||    
T  33907326 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgttaatctgcatattgttggttccttcattg 33907413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 11706711 - 11706803
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattgattca 233  Q
    ||||| ||||||| |||  ||||||| ||| ||||||||| ||||||||||||||| ||||| |||   ||||||||||||||||||| ||||    
T  11706711 tttttagttagtcgatgaaacttgcaatcttttttataaacctaactattatgtaacgttaatatgggtattgttggttccttcattggttca 11706803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 30572597 - 30572537
Alignment:
Q  168 tctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||||||||||| | ||||||||||||| |||||  ||||||||||||||||||||||||    
T  30572597 tctcttttataaacccaactattatgtaacgttaatctgcacattgttggttccttcattg 30572537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 327
Target Start/End: Complemental strand, 25205961 - 25205874
Alignment:
Q  240 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtga 327  Q
    |||||||||||||||| |||||||||||||| || ||||||||||   | || |||| |||||| ||||| ||||||||||| |||||    
T  25205961 tatgttggccaaaatttggcaacaaagacgtatctgaaggtcctccatcgtatcccttttgaacaactcccacggaaggaggttgtga 25205874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 16883983 - 16884033
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagt 152  Q
    |||||||||||||||||||||| |||||| ||| || ||||||||||||||    
T  16883983 cttttcattttgtctgatgtaagtattggcaaacatccctttttggttagt 16884033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 17041673 - 17041723
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagt 152  Q
    |||||||||||||||||||||| |||||| ||| || ||||||||||||||    
T  17041673 cttttcattttgtctgatgtaagtattggcaaacatccctttttggttagt 17041723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 4e-54; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 9226456 - 9226329
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatgg-cacttgcagtctcttttataaatctaactattatgtaatgtt 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  9226456 cttttcattttttctgatgtaaatattgggaaaaattcctttttggttagtctatgaacacttgcagtctcttttataaatctaactattatgtaatgtt 9226357  T
Q  201 aacatgcacattgttggttccttcattg 228  Q
    || |||||||||||||||||||||||||    
T  9226356 aatatgcacattgttggttccttcattg 9226329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 42827610 - 42827484
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  42827610 cttttcattttgtctaatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 42827511  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  42827510 atctgcacattgttggttccttcattg 42827484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 33638910 - 33638786
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||||||||||| ||||    
T  33638910 cttttcattttgtctgatgtaaatattggcaaaaattcctttttggttagtctatgacacttgcaatcttttttataaacctaactattatgtaacgtta 33638811  T
Q  202 acatgcacattgttggttccttcat 226  Q
    |  ||||||||||||||||||||||    
T  33638810 atctgcacattgttggttccttcat 33638786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 47174503 - 47174622
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  47174503 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgaagtctcttttataaacctaactattatgtaacgtta 47174602  T
Q  202 acatgcacattgttggttcc 221  Q
    | ||||||||||||||||||    
T  47174603 atatgcacattgttggttcc 47174622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 23766674 - 23766548
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  23766674 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 23766575  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  23766574 atttgtacattgttggttccttcattg 23766548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 42996476 - 42996598
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  42996476 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 42996575  T
Q  202 acatgcacattgttggttccttc 224  Q
    | |||||||||||||||||||||    
T  42996576 atatgcacattgttggttccttc 42996598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 9149389 - 9149520
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcag-tctcttttataaatctaactattatgtaatgtt 200  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||   | ||||||||| ||||||||||||||| |||    
T  9149389 cttttcattttgtctgatgtaaatattggcaaaaattactttttggttagtctatgacacttgcagcatttttttataaacctaactattatgtaacgtt 9149488  T
Q  201 aacatgcacattgttggttccttcattgattc 232  Q
    ||  ||||||||||||||||||||||||||||    
T  9149489 aatctgcacattgttggttccttcattgattc 9149520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 103 - 233
Target Start/End: Complemental strand, 23299957 - 23299827
Alignment:
Q  103 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 202  Q
    ||||||||||||||||| |||||||||  |||||| ||||||||||||||||||| |||||  ||||| ||||||||| ||||||||||||||| |||||    
T  23299957 ttttcattttgtctgatttaaatattgacaaaaatccctttttggttagtctatgacacttaaagtcttttttataaacctaactattatgtaacgttaa 23299858  T
Q  203 catgcacattgttggttccttcattgattca 233  Q
     ||||||||||||||||||||||||| ||||    
T  23299857 tatgcacattgttggttccttcattggttca 23299827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 27735284 - 27735154
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||| ||||||||||||||| |||||| |||||||||||||| |||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  27735284 cttttcattttgtttgatgtaaatattggcaaaaatccctttttggttagtttatgacacttgcagtcttttttataaacctaactattatgtaacgtta 27735185  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  ||||| ||||||||| ||||||||||||    
T  27735184 atctgcactttgttggttacttcattgattc 27735154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 42245091 - 42244965
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||  | ||||||||||||||||||||  |||||||||||||| ||||    
T  42245091 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctattactcttgcagtctcttttataaacataactattatgtaacgtta 42244992  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||||||||||| |||||||    
T  42244991 atctgcacattgttggttcattcattg 42244965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 6911710 - 6911579
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  6911710 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 6911611  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||| ||||||||||||||| ||||    
T  6911610 atctgcacattattggttccttcattggttca 6911579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 47573688 - 47573557
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  47573688 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 47573589  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||| ||||||||||||||| ||||    
T  47573588 atctgcacattattggttccttcattggttca 47573557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 17477917 - 17478043
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||| ||||| ||||||||||||||||||||    
T  17477917 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctctttcataaacctaactattatgtaatgtta 17478016  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  17478017 atctgcacattgttggttccttcattg 17478043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 17575297 - 17575171
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||| ||||| ||||||||||||||||||||    
T  17575297 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctctttcataaacctaactattatgtaatgtta 17575198  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  17575197 atctgcacattgttggttccttcattg 17575171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 19521154 - 19521276
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  19521154 cttttcattttgtctgatgtaaatattggcaaaaatctctttttcgttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 19521253  T
Q  202 acatgcacattgttggttccttc 224  Q
    |  ||||||||||||||||||||    
T  19521254 atctgcacattgttggttccttc 19521276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 38434785 - 38434663
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||  |||||| ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  38434785 cttttcattttatctgatgtaaatattgacaaaaatcccttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 38434686  T
Q  202 acatgcacattgttggttccttc 224  Q
    |  ||||||||||||||||||||    
T  38434685 atctgcacattgttggttccttc 38434663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 47163788 - 47163660
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcactt--gcagtctcttttataaatctaactattatgtaatgt 199  Q
    ||||||||||||||||||||||||||||  |||||| | |||||||||||| |||| |||||  ||||||||||||||||| ||||||||||||||| ||    
T  47163788 cttttcattttgtctgatgtaaatattgataaaaatccatttttggttagtttatgacacttttgcagtctcttttataaacctaactattatgtaacgt 47163689  T
Q  200 taacatgcacattgttggttccttcattg 228  Q
    |||  ||||||||||||||||||||||||    
T  47163688 taatctgcacattgttggttccttcattg 47163660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 8926126 - 8926007
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  8926126 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 8926027  T
Q  202 acatgcacattgttggttcc 221  Q
    |  || ||||||| ||||||    
T  8926026 atctgtacattgtcggttcc 8926007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 23300141 - 23300050
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  23300141 gcagagaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaaatcatcgaagaacttgcatgttcgagttgttcgaaagtag 23300050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 47174317 - 47174408
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  47174317 gcagagaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaaaaacttgcacgttcgagttgttccaaagtag 47174408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 5962724 - 5962850
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||| ||||||| |||||||||||| ||||||  ||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||  |||    
T  5962724 cttttcatattgtctggtgtaaatattggcaaaaatatctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacatta 5962823  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  5962824 atttgcacattgttggttccttcattg 5962850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 9226640 - 9226551
Alignment:
Q  12 agagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  9226640 agagaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaaagaagaacttgcacgttcgagttgttccaaagtag 9226551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 6911896 - 6911805
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  6911896 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 6911805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 9149207 - 9149294
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  9149207 agaacgtgtgattgaagaaggtggtaagctcatctttgatctcgaaaagtcatcgaagaacttgcatgttcgagttgttccaaagtag 9149294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 11499886 - 11500013
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattccttttt-ggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 200  Q
    ||||||||||||||||||||||||||||| |||||| | ||||| |||| |||||||  ||||||| | ||||||||||| ||||||||||||||| |||    
T  11499886 cttttcattttgtctgatgtaaatattggcaaaaatccattttttggtttgtctatgaaacttgcaatatcttttataaacctaactattatgtaacgtt 11499985  T
Q  201 aacatgcacattgttggttccttcattg 228  Q
    ||  ||||||||||||||||||||||||    
T  11499986 aatctgcacattgttggttccttcattg 11500013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 27735466 - 27735379
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  27735466 agaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 27735379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 38434971 - 38434888
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  38434971 gcagagaacgtgtcatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttc 38434888  T

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Target: chr7; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 42827796 - 42827705
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  42827796 gcagagaacatgtgatggaagaaggtgataagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagtag 42827705  T

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Target: chr7; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 47163974 - 47163891
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  47163974 gcagagaacgtctgatggaagaaggtggtaagctcatctttgatctcgaaaagtcctcgaagaacttgcacgttcgagttgttc 47163891  T

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Target: chr7; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 47573874 - 47573783
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  47573874 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 47573783  T

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Target: chr7; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 3795538 - 3795632
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaa 196  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  3795538 cttttcattttatctgatgtaaatattagcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaatctaactattatgtaa 3795632  T

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Target: chr7; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 4481622 - 4481496
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| | ||||||| ||||||||| |||||| ||||||||||||||| |||||||||| |||| ||||    
T  4481622 cttttcattttgtctgatgtaaatattgacaaaaatccatttttggctagtctatgacacttgtagtctcttttataaacctaactattaggtaacgtta 4481523  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  | |||||||||| |||||||||||    
T  4481522 atctacacattgttgattccttcattg 4481496  T

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Target: chr7; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 33030824 - 33030946
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||  ||||||| |||||||||||||  |||||||||||||| ||||    
T  33030824 cttttcattttgtctgatgtaaatactgacaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacttaactattatgtaacgtta 33030923  T
Q  202 acatgcacattgttggttccttc 224  Q
    |  | ||||||||||||||||||    
T  33030924 atctacacattgttggttccttc 33030946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 42687580 - 42687706
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||| |||||||||||| ||||||  ||||||||||| ||||||  || |||| ||||||||||||| || |||||||||||| ||||    
T  42687580 cttttcattttgtctggtgtaaatattggcaaaaatctctttttggttattctatgaaacctgcaatctcttttataaacctgactattatgtaacgtta 42687679  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  42687680 atctgcacattgttggttccttcattg 42687706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 17469775 - 17469886
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  17469775 cttttcattttgtctaatgtaaatattggcaaaaatccctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 17469874  T
Q  202 acatgcacattg 213  Q
    |  |||||||||    
T  17469875 atctgcacattg 17469886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 17583439 - 17583328
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  17583439 cttttcattttgtctaatgtaaatattggcaaaaatccctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 17583340  T
Q  202 acatgcacattg 213  Q
    |  |||||||||    
T  17583339 atctgcacattg 17583328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 17482178 - 17482269
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||| |||||||    
T  17482178 gcagagaacgagtgatggaagaaggtgataagctcatctttgatctcgaaaagtcatagaagaacttgcaaattcgagttgttccaaagtag 17482269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 17571036 - 17570945
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||| |||||||    
T  17571036 gcagagaacgagtgatggaagaaggtgataagctcatctttgatctcgaaaagtcatagaagaacttgcaaattcgagttgttccaaagtag 17570945  T

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Target: chr7; HSP #39
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 42996295 - 42996374
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagtt 89  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  42996295 gcagagaacgtgtcatggaagaaggtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcacgttcgagtt 42996374  T

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Target: chr7; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 17482364 - 17482486
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||| ||||| ||||||||    ||||||||    
T  17482364 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctctttcataaacctaactat----taatgtta 17482459  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  17482460 atctgcacattgttggttccttcattg 17482486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 17570850 - 17570728
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||| ||||| ||||||||    ||||||||    
T  17570850 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctctttcataaacctaactat----taatgtta 17570755  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  17570754 atctgcacattgttggttccttcattg 17570728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 3795356 - 3795435
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||  ||||||||||||    
T  3795356 agaacgtgtgatggaagaaggtggtaagctcatctttgatttcgaaaagtcaccgaagaacttgcattttcgagttgttc 3795435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 14308772 - 14308863
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  14308772 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 14308863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 17477731 - 17477822
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  17477731 gcagagaacgagtgatggaagaaggtgataagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 17477822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 17575483 - 17575392
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  17575483 gcagagaacgagtgatggaagaaggtgataagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 17575392  T

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Target: chr7; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 23766860 - 23766769
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  23766860 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 23766769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 33639092 - 33639005
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||| || || ||||||||||||| |||||||    
T  33639092 agaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcgccgaagaatttacatgttcgagttgttccaaagtag 33639005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 42245277 - 42245186
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||| | ||||||||||||||||||||||| ||| |||| ||||||||| |||||||||| |||||||||||||||| |||||||    
T  42245277 gcagagaacgtctaatggaagaaggtggtaagctcatctttaatctggaaaagtcaccgaagaacttccacgttcgagttgttccaaagtag 42245186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 33030649 - 33030729
Alignment:
Q  21 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  33030649 gtgatggaagaaggtggtaagttcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 33030729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 4481784 - 4481717
Alignment:
Q  34 gtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  4481784 gtggtaagctcatctttgatctcgaaaagtcaccgaagaaattgcacgttcgagttgttccaaagtag 4481717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 8926312 - 8926221
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||  |||||||||||  |||||||    
T  8926312 gcagataacgagtgatggaagaaggtggtaaactcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgtttcaaagtag 8926221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 42687394 - 42687485
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||||| |||||||  |||||| |||||  |||||||||||| |||||||    
T  42687394 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcggaaagtcacagaagaaattgcaaattcgagttgttccaaagtag 42687485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 19521008 - 19521077
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgca 79  Q
    ||||| |||| |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  19521008 gcagataacgagtgatggaagaaggtggtaagctcatctttaatctcgaaaagtcatagaagaacttgca 19521077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 42917822 - 42917883
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcactt 163  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||    
T  42917822 cttttcattttgtctgatgtaaatattggcaaaaatccttttttggttagtctatgacactt 42917883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 5962550 - 5962622
Alignment:
Q  21 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| |||||| ||| |  ||||||||||||    
T  5962550 gtgatggaagaaggtggtaagctcatctttgatcttgaaaagtcatagaagaagttgtaaattcgagttgttc 5962622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 11499718 - 11499791
Alignment:
Q  28 aagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||| | ||||||||||||| ||||  ||||||||||||  |||||||||||| |||||||    
T  11499718 aagaaggtggtaagctcgtctttgatctcgaaaggtcacagaagaacttgcaaattcgagttgttccaaagtag 11499791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 14308941 - 14309007
Alignment:
Q  162 ttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||| ||||||||||||| ||||||||||||||| |||||  || |||||||| ||||||||||||    
T  14308941 ttgcaatctcttttataaacctaactattatgtaacgttaatctgtacattgttagttccttcattg 14309007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 17469594 - 17469680
Alignment:
Q  16 aacgtgtgatggaa-gaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||||||  |||||| | |||  |||||| ||||| |||||||    
T  17469594 aacgagtgatggaaagaaggtggtaagctcatattttatctcgaaaagtcacagaagaaatagcaaattcgagctgttccaaagtag 17469680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 17583620 - 17583534
Alignment:
Q  16 aacgtgtgatggaa-gaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||||||  |||||| | |||  |||||| ||||| |||||||    
T  17583620 aacgagtgatggaaagaaggtggtaagctcatattttatctcgaaaagtcacagaagaaatagcaaattcgagctgttccaaagtag 17583534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 42917920 - 42917976
Alignment:
Q  172 ttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||||||| || |||||||||||| ||||| ||||||||||||| |||||||||||    
T  42917920 ttttataaacctcactattatgtaacgttaatatgcacattgttgattccttcattg 42917976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 103; Significance: 4e-51; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 61320 - 61446
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  61320 cttttcattttgtctgatgtaaatattgggaaaattttctttttggttagtctatgacacttgtagtctcttttataaatctaactattatgtaatgtta 61419  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    | ||||||||||||| |||||||||||    
T  61420 atatgcacattgttgcttccttcattg 61446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 49885 - 49978
Alignment:
Q  8 cagcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49885 cagcagagaacatgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtaatcgaagaacttgcacgttcgagttgttcaaaagtag 49978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 4e-51; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 12714509 - 12714635
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  12714509 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 12714608  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    | |||||||||||||||||||||||||    
T  12714609 atatgcacattgttggttccttcattg 12714635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 52309866 - 52309996
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  52309866 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 52309965  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  ||||||||||||||||||||||||||||    
T  52309966 atctgcacattgttggttccttcattgattc 52309996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 12246059 - 12245933
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| | |||||| ||||||||||||| ||||||||||||||| ||||    
T  12246059 cttttcattttgtctgatgtaaatattgacaaaaatccctttttggttagtctatgacgcttgcattctcttttataaacctaactattatgtaacgtta 12245960  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    | |||||||||||||||||||||||||    
T  12245959 atatgcacattgttggttccttcattg 12245933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 18814251 - 18814377
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  18814251 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 18814350  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  18814351 atctgtacattgttggttccttcattg 18814377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 34687619 - 34687745
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  34687619 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 34687718  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  34687719 atctgtacattgttggttccttcattg 34687745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 51965951 - 51965821
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||||| |||  |||||||||||| ||||||||| ||||||||||||||| ||||    
T  51965951 cttttcattttgtctgatgtaaatattagcaaaaatccctttttggttagtgtataacacttgcagtcttttttataaacctaactattatgtaacgtta 51965852  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  ||||||||||||||||||||||||||||    
T  51965851 atctgcacattgttggttccttcattgattc 51965821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 13662624 - 13662498
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||||| || |||||||| ||| ||||    
T  13662624 cttttcattttgtctgatgtaaatattggcaaaaatccatttttggttagtctatgacacttgcagtctcttttataaacctgactattatataacgtta 13662525  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||| ||||||||    
T  13662524 atctgcacattgttggttgcttcattg 13662498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 34692147 - 34692273
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||| ||| ||||    
T  34692147 cttttcattttgtctgatgtaagtattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatataacgtta 34692246  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  34692247 atctgcacattgttggttccttcattg 34692273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 41830267 - 41830142
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| | ||    
T  41830267 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacg-ta 41830169  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    | ||| |||||||||||||||||||||    
T  41830168 atatgtacattgttggttccttcattg 41830142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 16031823 - 16031696
Alignment:
Q  102 cttttcattttgtctgatgtaaatattggg-aaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 200  Q
    ||||||||||||| | |||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| |||    
T  16031823 cttttcattttgtataatgtaaatattgggcaaaaattccattttggttactctatgacacttgcagtctcttttataaacctaactattatgtaacgtt 16031724  T
Q  201 aacatgcacattgttggttccttcattg 228  Q
    ||  ||||||||||||||||||| ||||    
T  16031723 aatctgcacattgttggttccttaattg 16031696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 16032009 - 16031918
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  16032009 gcagagaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagtag 16031918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 43254903 - 43254772
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  43254903 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 43254804  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||| ||||||||||||||| ||||    
T  43254803 atctgcacattattggttccttcattggttca 43254772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 50395317 - 50395186
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  50395317 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 50395218  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||| ||||||||||||||| ||||    
T  50395217 atctgcacattattggttccttcattggttca 50395186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 31619721 - 31619847
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||| ||||||| |||||  ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||| ||||    
T  31619721 cttttcattttgtccgatgtaagtattgacaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaatctaactattatgtaacgtta 31619820  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||| ||||||||    
T  31619821 atctgtacattgttggtttcttcattg 31619847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 36681276 - 36681401
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||  |||| | | ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  36681276 cttttcattttgtctaatgtaaatattgacaaaa-tccatttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 36681374  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  36681375 atctgcacattgttggttccttcattg 36681401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 41963148 - 41963022
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  41963148 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtgtatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 41963049  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |  |||||||||||||||||||||    
T  41963048 atctatacattgttggttccttcattg 41963022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 47135432 - 47135562
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||    ||| |||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  47135432 cttttcattttgtctgatgtaaatattggcaaaaatcatgtttaggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 47135531  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  | ||||||||||||||||||||||||||    
T  47135532 atctacacattgttggttccttcattgattc 47135562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 48340361 - 48340487
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  ||||||  |||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| |||     
T  48340361 cttttcattttgtctgatgtaaatattgacaaaaataactttttggttagtctatgacacttgcagtctcttttataaacctaaatattatgtaacgttg 48340460  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||| |||||||||||||||    
T  48340461 atctgcacattattggttccttcattg 48340487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 52521785 - 52521660
Alignment:
Q  103 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 202  Q
    ||||||||||||||||||||| |||||| |||||| | |||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| |||||    
T  52521785 ttttcattttgtctgatgtaagtattggcaaaaatccatttttggttagtttatgaaacttgcactctcttttataaacctaactattatgtaacgttaa 52521686  T
Q  203 catgcacattgttggttccttcattg 228  Q
      ||||||||||||||||||||||||    
T  52521685 tttgcacattgttggttccttcattg 52521660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 228
Target Start/End: Complemental strand, 28565934 - 28565808
Alignment:
Q  105 ttcattttgtctgatgtaaatattgggaaaaa---ttcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||||||| |||||   |  |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||  |||    
T  28565934 ttcattttgtctgatgtaaatattggaaaaaaaaatctctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacatta 28565835  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  28565834 atctgcacattgttggttccttcattg 28565808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 18111618 - 18111749
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| |||||||||| |||| ||||    
T  18111618 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattacgtaacgtta 18111717  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||| ||||||||||||||| ||||    
T  18111718 atctgcacattattggttccttcattggttca 18111749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 12246236 - 12246154
Alignment:
Q  19 gtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12246236 gtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttcaaaagtag 12246154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 17671153 - 17671243
Alignment:
Q  11 cagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  17671153 cagagaacgtgtgatggaagaaggtggtaagctcacattttatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagtag 17671243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 17671488 - 17671614
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| |||||| | ||||||||||||||||| |||||| ||| ||||||||| |  |||||||||||||| ||||    
T  17671488 cttttcattttgtctaatgtaaatattggcaaaaatccatttttggttagtctatgacacttgtagtatcttttatagacataactattatgtaacgtta 17671587  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  17671588 atctgcacattgttggttccttcattg 17671614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 45004765 - 45004890
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||  |||| | | |||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  45004765 cttttcattttgtctaatgtaaatattgacaaaa-tccatttttgattagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 45004863  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  45004864 atctgcacattgttggttccttcattg 45004890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 18111432 - 18111523
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18111432 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 18111523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 43255089 - 43254998
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  43255089 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 43254998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 50395503 - 50395412
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  50395503 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 50395412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 15315097 - 15315179
Alignment:
Q  11 cagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  15315097 cagagaacgtgtgatggaagaaggtggaaagctcatctttgatctcgaaaagtcatcgaagaatttgcacgttcgagttgttc 15315179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 15317298 - 15317400
Alignment:
Q  121 taaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttc 220  Q
    |||||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||||||||    
T  15317298 taaatattggcaaaaatacctttttggttagtcaatgacacttgcagtctcttttataaacccaactattatgtaacgttaatatgcacattgttggttc 15317397  T
Q  221 ctt 223  Q
    |||    
T  15317398 ctt 15317400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 29840905 - 29840811
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaa 196  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  29840905 cttttcattttatctgatgtaaatattagcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaatctaactattatgtaa 29840811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 52309684 - 52309769
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagt 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  52309684 agaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagt 52309769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 36681093 - 36681181
Alignment:
Q  13 gagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  36681093 gagaacgtgtgatggaagaaggtggtaagttcatctttgatctcgaaaagtcaccgaagaacttgcacgttcaagttgttccaaagtag 36681181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 10763232 - 10763319
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  10763232 agaacgtgtgatggaagaaggtggtaagctcatctttgatttcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 10763319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 12714323 - 12714406
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| |||||    
T  12714323 gcagagaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaatttatcgaagaacttgcacgttcgagctgttc 12714406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 13662810 - 13662727
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||    
T  13662810 gcagagaacgtgtgatggaagaaggtggtaaactcatctttgatctcgaaaagttatcgaagaacttgcacgttcgagctgttc 13662727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 24294561 - 24294692
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| |||| |  |||||| |||||||| || |||||| ||||||||||||||| ||||||| ||||||| ||||    
T  24294561 cttttcattttgtctaatgtaaatattggcaaaactctctttttagttagtctttgacacttggagtctcttttataaacctaactagtatgtaacgtta 24294660  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  ||||||||||||||| |||||||| ||||    
T  24294661 atctgcacattgttggtttcttcattggttca 24294692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 39760368 - 39760237
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| |||| |  |||||| |||||||| || |||||| ||||||||||||||| ||||||| ||||||| ||||    
T  39760368 cttttcattttgtctaatgtaaatattggcaaaagtctctttttagttagtctttgacacttggagtctcttttataaacctaactagtatgtaacgtta 39760269  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  ||||||||||||||| |||||||| ||||    
T  39760268 atctgcacattgttggtttcttcattggttca 39760237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 10763414 - 10763524
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| |||||||||| |||| | |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  10763414 cttttcattttatctgatgtaagtattagcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 10763513  T
Q  202 acatgcacatt 212  Q
    |  ||||||||    
T  10763514 atctgcacatt 10763524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 28566122 - 28566040
Alignment:
Q  11 cagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| |||||    
T  28566122 cagagaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagttattgaagaacttgcacgttcgagctgttc 28566040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 45004580 - 45004670
Alignment:
Q  11 cagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | |||||||||||||||| |||||||| |||||||    
T  45004580 cagagaacgtgtgatggaagaaggtggtaagttcatctttgatctcgaaaagtcaccaaagaacttgcacgttcaagttgttccaaagtag 45004670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 50561074 - 50561202
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||||||| | ||||||||| |||| |||||||| | ||||    
T  50561074 cttttcattttgtctgatgtaaataatggcaaaaatccctttttggttagtctatgacacttgcagtattttttataaacctaa-tattatgt-acgtta 50561171  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  |||| |||||||||||||||||| ||||    
T  50561172 atctgcatattgttggttccttcatttattc 50561202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 44406407 - 44406507
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  44406407 cttttcattttgtctaatgtaaatattggcaaaaatccctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 44406506  T
Q  202 a 202  Q
    |    
T  44406507 a 44406507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 29841087 - 29841000
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||| ||| ||||||||||||| ||||||||||||| |||||||    
T  29841087 agaacgtgtgatggaagaaggtggtaagctcatctttgatttcgaaaaatcaccgaagaacttgcatgttcgagttgttccaaagtag 29841000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 31619535 - 31619626
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||| |||||||    
T  31619535 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaagttcgagttgttccaaagtag 31619626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 48340175 - 48340266
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||||||||||||||||  |||||||    
T  48340175 gcagagaacgagtgatggaagaaggtggtaagttcatctttgatctcaaaaagtcatagaagaacttgcacgttcgagttgtttcaaagtag 48340266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 24294394 - 24294466
Alignment:
Q  29 agaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  24294394 agaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 24294466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 38845451 - 38845351
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||| | |||||||||||| |||||| |||||||||||||||||||   |||||| ||||||||||||| ||||||||||||||| ||||    
T  38845451 cttttcattttgtcaggtgtaaatattggcaaaaatccctttttggttagtctatgaagcttgcaatctcttttataaacctaactattatgtaacgtta 38845352  T
Q  202 a 202  Q
    |    
T  38845351 a 38845351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 18814065 - 18814156
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  18814065 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 18814156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 34687433 - 34687524
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  34687433 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 34687524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 41830453 - 41830362
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  41830453 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 41830362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 34691967 - 34692052
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  34691967 aacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 34692052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 103 - 212
Target Start/End: Original strand, 42682419 - 42682527
Alignment:
Q  103 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 202  Q
    |||| ||||| ||||||||||||||| | |||| | ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||    
T  42682419 tttttattttatctgatgtaaatattagcaaaa-tccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgttaa 42682517  T
Q  203 catgcacatt 212  Q
      ||||||||    
T  42682518 tctgcacatt 42682527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 28631382 - 28631466
Alignment:
Q  140 ctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttc 224  Q
    |||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||    
T  28631382 cttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgttaatctgcacattgttggttccttc 28631466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 50560892 - 50560979
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||||| ||| ||||||||||||| || |||||||||| |||||||    
T  50560892 agaacgtgtgatggaagaagatggtaaactcatctttgatctcgaaaattcagcgaagaacttgcatgtccgagttgttctaaagtag 50560979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 51966132 - 51966046
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||| ||||||||| ||| |||||||    
T  51966132 agaacgtgtgatggaa-aaggtggtaagctcatctttgatctcgaaaagtcaccgaagaaattgcatgttcgagtttttccaaagtag 51966046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 52521972 - 52521881
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| ||||||||||||||||| || ||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  52521972 gcagataacgagtgatggaagaaggtggcaaactcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 52521881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 42682240 - 42682323
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||    |||| | ||||||||| ||||||||||||| ||||||||||||| |||||||    
T  42682240 agaacgtgtgatggaagaaggtggtaagctca----tgattttgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 42682323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 44406227 - 44406312
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||||||  ||| ||||||||  |||||||||||| |||||||    
T  44406227 aacgagtgatggaagaacgtggtaaactcatatttgatctcgaaaagtcacagaataacttgcaaattcgagttgttccaaagtag 44406312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 38845617 - 38845537
Alignment:
Q  21 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||| | ||||||||||||||||  ||||||||||||  |||||||| ||| |||||||    
T  38845617 gtgatggaagaaggtggtaagctcatctctgatctcgaaaagtcacagaagaacttgcaaattcgagttattccaaagtag 38845537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 41963323 - 41963243
Alignment:
Q  21 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||| | ||||||||| ||||||||||||||||||  ||||||||||||  ||||| |||||| |||||||    
T  41963323 gtgatggaagaaggagttaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgatttgttccaaagtag 41963243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 26941415 - 26941330
Alignment:
Q  242 tgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtga 327  Q
    |||| ||||||| |||||||||||||||| || ||||||||||  || || ||||| ||||| | ||| |||||||||||||||||    
T  26941415 tgtttgccaaaactcggcaacaaagacgtgtccgaaggtcctccaccgtatccctcctgaacaaatcccacggaaggaggctgtga 26941330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 35436862 - 35436988
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  35436862 cttttcattttgcctgatgtaaatattgggaaaaattcctttttggttagtctatgacacttgcagtctcttttataaatct-actattatgtaatgtta 35436960  T
Q  202 acatgcaca-ttgttggttccttcattg 228  Q
    | ||||||| ||||||||||||||||||    
T  35436961 atatgcacatttgttggttccttcattg 35436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 8242723 - 8242849
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||    
T  8242723 cttttcattttgtctgatgtaaatattgacaaaaatccctttttggttagtctatgacacttacagtctcttttataaacctaactattatgtaacgtta 8242822  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    | |||||||||||||||||||||||||    
T  8242823 atatgcacattgttggttccttcattg 8242849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 54793197 - 54793070
Alignment:
Q  101 gcttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 200  Q
    |||||||||||||||||||||||||||||| ||||||  |||||||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||    
T  54793197 gcttttcattttgtctgatgtaaatattggcaaaaatctctttttggttagtctatgacacttgcagtctcttttataaacttaactattatgtaacgtt 54793098  T
Q  201 aacatgcacattgttggttccttcattg 228  Q
    ||  ||||||||||||||||||||||||    
T  54793097 aatctgcacattgttggttccttcattg 54793070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 23193491 - 23193617
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  23193491 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgaagtctcttttataaacctaactattatgtaacgtta 23193590  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||||||||||| |||||||    
T  23193591 atctgcacattgttggttctttcattg 23193617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 52463163 - 52463037
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  52463163 cttttcattttgtctgatgcaaatattggcaaaaatccctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 52463064  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||| ||||||||    
T  52463063 atctgcacattgttggtttcttcattg 52463037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 55295010 - 55294880
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||| | ||||||||| ||||||||||||||| ||||    
T  55295010 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagttttttttataaacctaactattatgtaacgtta 55294911  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  ||||||||||||||| ||||||||||||    
T  55294910 atctgcacattgttggttacttcattgattc 55294880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 21699804 - 21699678
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  21699804 cttttcattttgtctggtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 21699705  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  21699704 atctgcacattgttggttccttcattg 21699678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 40827266 - 40827136
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||  |||||||||||| ||||||||| ||||||||||||||| ||||    
T  40827266 cttttcattttgtctgatgtaaatattggcaaaaatccttttttggttagtctatcacacttgcagtcttttttataaacctaactattatgtaacgtta 40827167  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  |||||||||||||||||||| |||||||    
T  40827166 atctgcacattgttggttccttcgttgattc 40827136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 32755540 - 32755665
Alignment:
Q  103 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 202  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||| ||||||| |||||    
T  32755540 ttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactactatgtaacgttaa 32755639  T
Q  203 catgcacattgttggttccttcattg 228  Q
      ||||||||||||||||||||||||    
T  32755640 tttgcacattgttggttccttcattg 32755665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 36165242 - 36165115
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaa-ttcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 200  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||| |||||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  36165242 cttttcattttgtctgatataaatattgggaaaaaattcttttttgattagtctatgacagttgcagtctcttttataaatctaactattatataatgtt 36165143  T
Q  201 aacatgcacattgttggttccttcattg 228  Q
    || ||||||||||| | |||||||||||    
T  36165142 aatatgcacattgtagattccttcattg 36165115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 16495913 - 16496039
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||||| || |||||||| ||| ||||    
T  16495913 cttttcattttgtctgatgtaaatattggcaaaaatccatttttggttagtctatgacacttgcagtctcttttataaacctgactattatataacgtta 16496012  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||| ||||||||    
T  16496013 atctgcacattgttggttgcttcattg 16496039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 35088069 - 35087943
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||  ||||||| ||||||||||||| ||||| ||||||||| ||||    
T  35088069 cttttcattttgtctgatgtaagtattggcaaaaattcatttttggttagtctatgaaacttgcaatctcttttataaacctaacaattatgtaacgtta 35087970  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  35087969 atctgcacattgttggttccttcattg 35087943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 48976707 - 48976833
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||| |||||||||||| ||||||  ||||||||||||||||||  ||||||| |||||| |||||| ||||||||||||||| ||||    
T  48976707 cttttcattttgtctggtgtaaatattggcaaaaatctctttttggttagtctatgaaacttgcaatctcttatataaacctaactattatgtaacgtta 48976806  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    | |||||||||||||||||||||||||    
T  48976807 atatgcacattgttggttccttcattg 48976833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 39796704 - 39796573
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  39796704 cttttcattttgtctgatgtaaatattgacaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 39796605  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||||||||||||||||||| ||||    
T  39796604 atctgcacattgttggttccttcattggttca 39796573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 50741376 - 50741502
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  50741376 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 50741475  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  50741476 atttgcacattgttggttccttcattg 50741502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 50771478 - 50771352
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  50771478 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 50771379  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  50771378 atttgcacattgttggttccttcattg 50771352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 54512801 - 54512927
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||||| ||||||  ||| ||||||||||||||||||||||||||||||||| ||||    
T  54512801 cttttcattttgtctgatgtaaatattggcaaaaatctctttttggttaatctatgaaactcgcagtctcttttataaatctaactattatgtaacgtta 54512900  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||| | |||||||||||||||||    
T  54512901 atctgcataatgttggttccttcattg 54512927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 36165429 - 36165337
Alignment:
Q  9 agcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  36165429 agcatagaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcatcgaagaacttgcacattcgagttgttccaaagtag 36165337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 5252605 - 5252474
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||| |  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  5252605 cttttcattttgtctgatgtaaatattgacaaaattctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 5252506  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||||||||||||||||||| ||||    
T  5252505 atctgcacattgttggttccttcattggttca 5252474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 6104357 - 6104227
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||| ||||| ||||||||||||||| ||||    
T  6104357 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctctttgataaacctaactattatgtaacgtta 6104258  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  || ||| ||||||||||||||||| ||||    
T  6104257 atctgtaca-tgttggttccttcattggttca 6104227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 32755323 - 32755413
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 100  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  32755323 gcagataacgagtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagta 32755413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 2845271 - 2845184
Alignment:
Q  13 gagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||||||||||||||    
T  2845271 gagaacgtgtgatggaagaaggtggtaagctcatctttgatctcaaaaagtcaccgaagaacttgcacgatcgagttgttcaaaagta 2845184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 11598195 - 11598064
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaa-tctaactattatgtaatgtt 200  Q
    ||||||||||||||||||||||| ||||| |||||  | ||||| |||||| |||| |||||||||||| ||||||||| | |||||||||||||| |||    
T  11598195 cttttcattttgtctgatgtaaacattggcaaaaaaccattttttgttagtttatgacacttgcagtcttttttataaactttaactattatgtaacgtt 11598096  T
Q  201 aacatgcacattgttggttccttcattgattc 232  Q
    ||  ||||||||||||||||||||||||||||    
T  11598095 aatctgcacattgttggttccttcattgattc 11598064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 39796890 - 39796799
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  39796890 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 39796799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 48521435 - 48521348
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  48521435 agaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 48521348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 52853673 - 52853549
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||||||||  ||||||||  | ||||||||| | ||||||||||||| ||||    
T  52853673 cttttcattttgtctgatgtaaatattggcgaaaatccctttttggttagtctatgaaacttgcag--ttttttataaacccaactattatgtaacgtta 52853576  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  52853575 atctgcacattgttggttccttcattg 52853549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 54793382 - 54793299
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||    
T  54793382 gcagagaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagttatcgaagaacttgcacgttcgagctgttc 54793299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 31369248 - 31369122
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||  ||||||||| |||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  31369248 cttttcattttgtctgatgtaagtattgacaaaaattcccttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 31369149  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || ||||||||||||| |||||||    
T  31369148 atctgtacattgttggttcattcattg 31369122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 48521253 - 48521123
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||| |   |||||||||||| |||| |||||||||||| ||||| ||| ||||||||||||||| ||||    
T  48521253 cttttcattttgtctgatgtaaatattggcaaaattctttttttggttagtatatgacacttgcagtcttttttagaaacctaactattatgtaacgtta 48521154  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  |||| ||||||||||| |||||||||||    
T  48521153 atctgcatattgttggttcattcattgattc 48521123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 8242537 - 8242626
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagt 99  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  8242537 gcagagaacgtgtaatggaagagggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagt 8242626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 5252791 - 5252700
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  5252791 gcagagaacatgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 5252700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 11598377 - 11598290
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  11598377 agaacgtgtaatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagtacttgcatgttcgagttgttcaaaagtag 11598290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 16495727 - 16495810
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||    
T  16495727 gcagagaacgtgtgatggaagaaggtggtaaactcatctttgatctcgaaaagttatcgaagaacttgcacgttcgagctgttc 16495810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 40827448 - 40827361
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  40827448 agaacgtgtgatggaagaatgtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 40827361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 54512616 - 54512699
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  54512616 gcagagaacgaatgatggaagaaggtggtaagctcatctttgatctcgaaaagtcatagaagaacttgcacgttcgagttgttc 54512699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 22477731 - 22477841
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  22477731 cttttcattttatctgatgtaaatattagcaaaaatccctttttggttggtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 22477830  T
Q  202 acatgcacatt 212  Q
    |  ||||||||    
T  22477831 atctgcacatt 22477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 49113089 - 49113215
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||| ||||| |||||  |||||| |||||||| ||||||||||  ||||||  |||||| |||||| ||||||||||||||| ||||    
T  49113089 cttttcattttgtctggtgtaattattgacaaaaatccctttttgtttagtctatgaaacttgcgatctcttatataaacctaactattatgtaacgtta 49113188  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  49113189 atctgcacattgttggttccttcattg 49113215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 23193301 - 23193390
Alignment:
Q  12 agagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  23193301 agagaacgagcgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcacgttcgagttgttccaaagtag 23193390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 55295192 - 55295105
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||| ||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  55295192 agaacgtgcgatggaagaaggtggtaagcttatctttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 55295105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 11951206 - 11951096
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| || ||||||||| || | |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  11951206 cttttcattttatccgatgtaaatgttagcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 11951107  T
Q  202 acatgcacatt 212  Q
    |  ||||||||    
T  11951106 atctgcacatt 11951096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 22477549 - 22477636
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||| |||| | |||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  22477549 agaacgtgtgatggaagaaggtggtatgctcctctttgatttcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 22477636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 31369434 - 31369343
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  31369434 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 31369343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 52840950 - 52840859
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  52840950 gcagagaacgagtgatggaagaaggtggtaatctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 52840859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 6104537 - 6104452
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  6104537 aacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 6104452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 19893784 - 19893699
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagt 99  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||  ||||||||| || ||||||||||||| |||||    
T  19893784 agaacgtgtgatggaagaaggtggtaagctcatcttggatctcgaaaagtcacagaagaactttcatgttcgagttgttccaaagt 19893699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 35088249 - 35088164
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  35088249 aacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 35088164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 48976527 - 48976612
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||  |||||||||||| |||||||    
T  48976527 aacgagtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcacagaagaagttgcaaattcgagttgttccaaagtag 48976612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 49112912 - 49113003
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  49112912 gcagataacgagtgatggaagaaggtggtaagctcatcttggatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 49113003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 50771664 - 50771573
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||| | |||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||  |||||||||||| |||||||    
T  50771664 gcagagaatgagtgatggaagaaggtggtaagctcatctttgatctcgaaaaatcacagaagaacttgcaaattcgagttgttccaaagtag 50771573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 11951388 - 11951303
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagt 99  Q
    ||||||||||||| |||||| |||||||||||| |||||| ||||||| ||| ||||||||||||| ||||||||||||| |||||    
T  11951388 agaacgtgtgatgaaagaagttggtaagctcatctttgatttcgaaaaatcaccgaagaacttgcatgttcgagttgttccaaagt 11951303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 50741201 - 50741281
Alignment:
Q  21 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||  |||||||||||| |||||||    
T  50741201 gtgatggaagaaggtggtaagctcatctttgatctcgaaaattcacagaagaacttgcaaattcgagttgttccaaagtag 50741281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 196
Target Start/End: Original strand, 11383144 - 11383235
Alignment:
Q  105 ttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaa 196  Q
    |||||||||||| ||||||||||||| ||||||  |||||||||||||||||| ||||  ||| |||||||||||| |||| ||||||||||    
T  11383144 ttcattttgtcttatgtaaatattggtaaaaatcactttttggttagtctatgacactgacagactcttttataaacctaattattatgtaa 11383235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 16341717 - 16341804
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||| ||| |||||  ||||||||||||||||||||||||    
T  16341717 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatataacgttaatctgcacattgttggttccttcattg 16341804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 52463345 - 52463258
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||| |||||||||||||||||||||  ||||||||||||||||   || ||||||||||||||||||||||| |||||||    
T  52463345 agaaagtgtgaaggaagaaggtggtaagctcattattgatctcgaaaagtcgctgatgaacttgcacgttcgagttgttccaaagtag 52463258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 52853858 - 52853768
Alignment:
Q  11 cagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||| |||||||||||||||||||||||||| |||||||| ||||||||   ||||||||||||  |||||||||||| |||||||    
T  52853858 cagataacgagtgatggaagaaggtggtaagctcatctttgatcttgaaaagtcgcagaagaacttgcaaattcgagttgttccaaagtag 52853768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 11326063 - 11325970
Alignment:
Q  8 cagcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||| |||| |||||||||||||||| |||||| || ||||||||||||||||||  ||||||||||||  |||||||||||  |||||||    
T  11326063 cagcagataacgagtgatggaagaaggtgataagcttatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgtttgaaagtag 11325970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 51248198 - 51248289
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||| |||||||| |||| ||||||||| ||||||||  ||||||||| ||| |||||||||||| |||||||    
T  51248198 gcagataacgagtgatggaagaatgtggtaagttcatctttgatctcaaaaagtcacagaagaactttcacattcgagttgttccaaagtag 51248289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 51248384 - 51248461
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataa 179  Q
    ||||||||||||| || |||||||||||| |||||| |||||||||||||||||||  |||| || ||||||||||||    
T  51248384 cttttcattttgtgtggtgtaaatattggcaaaaatccctttttggttagtctatgaaactttcaatctcttttataa 51248461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 21699988 - 21699899
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||  ||||||| ||||||||||||||||||  ||| ||||||||  |||||||||||| |||||||    
T  21699988 gcagataacgagtgatggaagaaggtgg--agctcatctttgatctcgaaaagtcacagaaaaacttgcaaattcgagttgttccaaagtag 21699899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 35436731 - 35436774
Alignment:
Q  8 cagcagagaacgtgtgatggaagaaggtggtaagctcatatttg 51  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  35436731 cagcagagaacgtgtgatggaagaaggtggtaagctcatctttg 35436774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 1202167 - 1202254
Alignment:
Q  240 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtga 327  Q
    |||||||||||||| |||||||||||||||| |  ||||||||||   | || ||||| ||||| ||||| ||||||||||| |||||    
T  1202167 tatgttggccaaaactcggcaacaaagacgtgttcgaaggtcctccatcgtatccctcctgaacaactcccacggaaggaggttgtga 1202254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 52840764 - 52840724
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctt 142  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  52840764 cttttcattttgtctgatgtaaatattggcaaaaatccctt 52840724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 11383004 - 11383047
Alignment:
Q  58 aaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| ||| ||||||||||||||||||||||||||| |||||||    
T  11383004 aaaaatcaccgaagaacttgcacgttcgagttgttccaaagtag 11383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 9e-49; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 4425515 - 4425637
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  4425515 ctttttattttgtctgatgtaaatattgggaaaaatccctttttggttagtctatgacacttacagtctcttttataaacctaactattatgtaatgtta 4425614  T
Q  202 acatgcacattgttggttccttc 224  Q
    | |||||||||||||||||||||    
T  4425615 atatgcacattgttggttccttc 4425637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 1073502 - 1073376
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  1073502 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 1073403  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  1073402 atctgcacattgttggttccttcattg 1073376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 18599225 - 18599099
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  18599225 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 18599126  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  18599125 atctgcacattgttggttccttcattg 18599099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 33321692 - 33321562
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||| || |||||| || ||||||||||||||| ||||    
T  33321692 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtcaatgacacttgcagccttttttattaacctaactattatgtaacgtta 33321593  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    | |||||||||||||||||||||||||||||    
T  33321592 atatgcacattgttggttccttcattgattc 33321562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 14831493 - 14831623
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||| || | ||||||||| ||||||||||||||| ||||    
T  14831493 cttttcattttgtttgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgctgttttttttataaacctaactattatgtaacgtta 14831592  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  ||||||||||||||||||||||||||||    
T  14831593 atctgcacattgttggttccttcattgattc 14831623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 14888176 - 14888051
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |  ||||||| ||||||||||||| ||||||||||||||||||||    
T  14888176 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtcta-gaaacttgcaatctcttttataaacctaactattatgtaatgtta 14888078  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  14888077 atctgtacattgttggttccttcattg 14888051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 25540081 - 25540207
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| |||||| |||||||||||| |||||||||||| ||||||||  ||||||||||||||| ||||    
T  25540081 cttttcattttgtctgatgtaaatattgacaaaaatcccttttaggttagtctatgacacttgcagtcttttttataagcctaactattatgtaacgtta 25540180  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  25540181 atctgcacattgttggttccttcattg 25540207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 22374080 - 22373954
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||||||||   |||||| |||||||||||| ||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  22374080 cttttcattttgtctgatgtaaatattcacaaaaatccctttttggttattctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 22373981  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    | |||||||||||||||||| ||||||    
T  22373980 atatgcacattgttggttccctcattg 22373954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 2521172 - 2521299
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcc-tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 200  Q
    |||||||||||||||||||||| |||||  ||||||||| |||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||    
T  2521172 cttttcattttgtctgatgtaagtattgacaaaaattccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtt 2521271  T
Q  201 aacatgcacattgttggttccttcattg 228  Q
    ||  || |||||||||||||||||||||    
T  2521272 aatttgtacattgttggttccttcattg 2521299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 17939530 - 17939656
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  17939530 cttttcattttttctgatgtaaatattggcaaaaattctttttttgttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 17939629  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||||||  |||||||||||    
T  17939630 atctgcacattgttaattccttcattg 17939656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 34855963 - 34856089
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||||||||||||  ||||| | ||||||||||||| ||||||||||||||| ||||    
T  34855963 cttttcattttgtctgatgtaagtgttggcaaaaattcctttttggttagtctatgaaacttgtaatctcttttataaacctaactattatgtaacgtta 34856062  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||| ||||||||    
T  34856063 atctgtacattgttggtttcttcattg 34856089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 102 - 214
Target Start/End: Complemental strand, 11934919 - 11934807
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  11934919 cttttcattttgtctgatgtaagtattggtaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 11934820  T
Q  202 acatgcacattgt 214  Q
    |  ||||||||||    
T  11934819 atctgcacattgt 11934807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 102 - 222
Target Start/End: Original strand, 15275666 - 15275786
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||||  |||    
T  15275666 cttttcattttatctgatgtaaatattggtaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacctta 15275765  T
Q  202 acatgcacattgttggttcct 222  Q
    |   |||||||||||||||||    
T  15275766 atccgcacattgttggttcct 15275786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 13457269 - 13457178
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  13457269 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 13457178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 4424494 - 4424620
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||| ||||| |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||| |||  |||    
T  4424494 cttttcatttcgtctggtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatctaacatta 4424593  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||| |||||||||||||||    
T  4424594 atctgcacattattggttccttcattg 4424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 1931987 - 1932072
Alignment:
Q  143 tttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  1931987 tttggttagtctatgacacttgcggtctcttttataaatctaactattatgtaatgttaatatgcacattgttgtttccttcattg 1932072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 13457083 - 13456953
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  13457083 cttttcattttgtct-atgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 13456985  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||| |||||||||| |||| ||||    
T  13456984 atctgcacattattggttcctttattggttca 13456953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 14831311 - 14831398
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||| |||||||    
T  14831311 agaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcatgttcgagttgttccaaagtag 14831398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 28228936 - 28228845
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||| |||||||    
T  28228936 gcagagaacgtgtgatggaagaaggtgataagctcatctttgatctcgaaaagtcaccgaagaacttatacgttcgagttgttccaaagtag 28228845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 34321100 - 34321227
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctctttt-ataaatctaactattatgtaatgtt 200  Q
    ||||||||||||||||||||||||||||| |||||  | |||||||||||| |||| |||||||||| | |||| ||||| ||||||||||||||| |||    
T  34321100 cttttcattttgtctgatgtaaatattggcaaaaagccttttttggttagtatatgacacttgcagttttttttcataaacctaactattatgtaacgtt 34321199  T
Q  201 aacatgcacattgttggttccttcattg 228  Q
    ||  |||||||||||| |||||||||||    
T  34321200 aatctgcacattgttgattccttcattg 34321227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 35041116 - 35041227
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  35041116 cttttcattttgtctaatgtaaatattggcaaaaatccctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 35041215  T
Q  202 acatgcacattg 213  Q
    |  |||||||||    
T  35041216 atttgcacattg 35041227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 14888362 - 14888271
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||| |||||||    
T  14888362 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcatagaagaacttgcaaattcgagttgttccaaagtag 14888271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 33321874 - 33321787
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||||| ||||||||||||| |||||||    
T  33321874 agaacgtgtgatggaagaaggtggtaagttcatctttgatctcgagaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 33321787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 11935105 - 11935015
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 100  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||  |||||||||||| ||||||    
T  11935105 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcaaattcgagttgttccaaagta 11935015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 18311814 - 18311924
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||| |||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  18311814 cttttcattttgtctaatgtaaatattggcaaaaatccctttttgtttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 18311913  T
Q  202 acatgcacatt 212  Q
    |  ||||||||    
T  18311914 atctgcacatt 18311924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 1073688 - 1073597
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  1073688 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 1073597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 1931853 - 1931939
Alignment:
Q  8 cagcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||| |||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1931853 cagcagagaacatgtgatagaagaaggtggtaagctcat-------ctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 1931939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 17939344 - 17939435
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||  ||| ||||||||  |||||||||||| |||||||    
T  17939344 gcagagaacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaataacttgcaaattcgagttgttccaaagtag 17939435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 18599411 - 18599320
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  18599411 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 18599320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 22374268 - 22374175
Alignment:
Q  8 cagcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  || ||||||||| |||||||    
T  22374268 cagcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaatttgagttgttccaaagtag 22374175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 35040936 - 35041021
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  | |||||||||| |||||||    
T  35040936 aacgagtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcagagaagaacttgcaaatccgagttgttccaaagtag 35041021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 15275480 - 15275571
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||  || ||||||||| |||||||    
T  15275480 gcagagaacgagtgatggaagaaagtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcatatttgagttgttcgaaagtag 15275571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 34855777 - 34855868
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  34855777 gcagataacgagtgatggaagaaggtggtaagctcattttttatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 34855868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 18311635 - 18311719
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  18311635 aacgagtgatggaagaaggtggta-gctcatatttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 18311719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 30044255 - 30044342
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||| |||||||||||  ||||||| ||||||||||||| | ||||||||||||| |||||  ||||||||||||||||||||||||    
T  30044255 tttttagttagtctatgaaacttgcaatctcttttataaaccgaactattatgtaacgttaatctgcacattgttggttccttcattg 30044342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 2520986 - 2521068
Alignment:
Q  11 cagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    |||| |||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||  ||||||||||||    
T  2520986 cagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacataagaacttgcaaattcgagttgttc 2521068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 34320918 - 34320997
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    |||| |||||||||||||||||| ||| ||||| |||||||||||||| ||| | ||||||||||| |||||||||||||    
T  34320918 agaatgtgtgatggaagaaggtgataatctcatctttgatctcgaaaaatcaccaaagaacttgcatgttcgagttgttc 34320997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 4424314 - 4424399
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| ||||| |||||||||||||||||||| ||||||||| |||||| |   |||||||||||  |||||||||||| |||||||    
T  4424314 aacgagtgatagaagaaggtggtaagctcatctttgatctccaaaagttacaaaagaacttgcaaattcgagttgttccaaagtag 4424399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 19813245 - 19813332
Alignment:
Q  240 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtga 327  Q
    |||||||||||||| |||||||||||||||| |  ||||||||||   | || ||||| ||||| ||||| ||||||||||| |||||    
T  19813245 tatgttggccaaaactcggcaacaaagacgtgttcgaaggtcctccatcgtatccctcctgaacaactcccacggaaggaggttgtga 19813332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 32689535 - 32689622
Alignment:
Q  240 tatgttggccaaaattcggcaacaaagacgtctcagaaggtcctctgccatagccctcttgaaccactcctacggaaggaggctgtga 327  Q
    |||||||||||||| |||||||||||||| | |  ||||||||||   | || ||||| ||||| ||||| |||||||||||||||||    
T  32689535 tatgttggccaaaactcggcaacaaagacttgtttgaaggtcctccatcgtatccctcctgaacaactcccacggaaggaggctgtga 32689622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 25539943 - 25539986
Alignment:
Q  58 aaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||| ||||||||||||| ||||||||||||| |||||||    
T  25539943 aaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 25539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 9e-49; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 33929784 - 33929910
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  33929784 cttttcattttgtctgatgtaaatattgacaaaaattcctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 33929883  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  33929884 atctgcacattgttggttccttcattg 33929910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 33707008 - 33706878
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  33707008 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 33706909  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  ||||||||||||||||||||||| ||||    
T  33706908 atctgcacattgttggttccttcattaattc 33706878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 41780818 - 41780944
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  41780818 cttttcattttgtctgatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaacgtta 41780917  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||| |||||||||||||||||||    
T  41780918 atctgcatattgttggttccttcattg 41780944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 104 - 228
Target Start/End: Original strand, 290543 - 290663
Alignment:
Q  104 tttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaac 203  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    | |||||||||||||||||||||||||||||||||||||     
T  290543 tttcattttgtctgatgtaaatattggaaaaaattcctttttggttagtctatgac----ggagtctcttttataaatctaactattatgtaatgttaat 290638  T
Q  204 atgcacattgttggttccttcattg 228  Q
    |||||||||||||||||||||||||    
T  290639 atgcacattgttggttccttcattg 290663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 33611369 - 33611243
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  33611369 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 33611270  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  33611269 atctgcacattgttggttccttcattg 33611243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 7285667 - 7285793
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  7285667 cttttcattttgtctgatgtaagtattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 7285766  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  7285767 atctgcacattgttggttccttcattg 7285793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 30689299 - 30689425
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  30689299 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 30689398  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  30689399 atctgtacattgttggttccttcattg 30689425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 2195155 - 2195281
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  2195155 cttttcattttgtctgatgtaagtattgacaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 2195254  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  2195255 atctgtacattgttggttccttcattg 2195281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 3150833 - 3150707
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||  |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||||    
T  3150833 cttttcattttgtcttgtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaatgtta 3150734  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||| ||||||||||||||||||    
T  3150733 atctgcactttgttggttccttcattg 3150707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 3210429 - 3210303
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||| | |||||| | ||||| |||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  3210429 cttttcattttgtctgatgtaaatattagcaaaaatcctttttttgttagtttatgacacttgcagtctcttttataaacctaactattatgtaacgtta 3210330  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  3210329 atctgcacattgttggttccttcattg 3210303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 4882262 - 4882388
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||   ||||||| ||||||||||||| ||||||||||||||| ||||    
T  4882262 cttttcattttgtctgatgtaaatattcgtaaaaatccctttttggttagtctattaaacttgcaatctcttttataaacctaactattatgtaacgtta 4882361  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  4882362 atctgcacattgttggttccttcattg 4882388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 20996173 - 20996043
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||  |||||| |||||||||||| ||| || |||||||| ||||||||||||| ||||||||||||||| ||||    
T  20996173 cttttcattttgtctgatgtaagtattgtcaaaaatccctttttggttaatctttgacacttgcaatctcttttataaacctaactattatgtaacgtta 20996074  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  ||||||||||||||||||||||||||||    
T  20996073 atctgcacattgttggttccttcattgattc 20996043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 26321304 - 26321178
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  26321304 cttttcattttgtctgatgtaagtattggcaaaaattcctgtttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 26321205  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  26321204 atctgtacattgttggttccttcattg 26321178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 9702242 - 9702364
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| ||||||  |||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  9702242 cttttcattttatctgatgtaaatattggcaaaaatctcttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 9702341  T
Q  202 acatgcacattgttggttccttc 224  Q
    |  ||||||||||||||||||||    
T  9702342 atctgcacattgttggttccttc 9702364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 20349913 - 20350039
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  20349913 cttttcattttttctgatgtaaatattggcaaaaatcccattttggttagtttatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 20350012  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  20350013 atctgcacattgttggttccttcattg 20350039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 19395346 - 19395477
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  19395346 cttttcattttgtctgatgtaaatattggcaaaaatatctttttagttagtctttgacacttgaagtctcttttataaacctaactattatgtaacgtta 19395445  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
       |||||||||||||||| ||||||| ||||    
T  19395446 gtctgcacattgttggttctttcattggttca 19395477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 31295903 - 31295772
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  31295903 cttttcattttgtctgatgtaaatattgacaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 31295804  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||||||||||| ||||||| ||||    
T  31295803 atctgcacattgttggttctttcattggttca 31295772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 3028744 - 3028866
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||  ||||||| |||||||||||||  |||||||||||||| ||||    
T  3028744 cttttcattttgtctgatgtaaatattggcaaaaatccctttttcgttagtctatgaaacttgcaatctcttttataaacttaactattatgtaacgtta 3028843  T
Q  202 acatgcacattgttggttccttc 224  Q
    |  ||||||||||| ||||||||    
T  3028844 atttgcacattgttagttccttc 3028866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 3397367 - 3397241
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||| |||||||||  |||    
T  3397367 cttttcattttgtctggtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaacgattatgtaacatta 3397268  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||||||||||| |||||||    
T  3397267 atctgcacattgttggttcattcattg 3397241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 33929607 - 33929689
Alignment:
Q  19 gtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33929607 gtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttcaaaagtag 33929689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 104 - 228
Target Start/End: Complemental strand, 1852157 - 1852032
Alignment:
Q  104 tttcattttgtctgatgtaaatattgggaaaaattcc-tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaa 202  Q
    ||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| || ||    
T  1852157 tttcattttgtctgatgtaaatattgacaaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtaaa 1852058  T
Q  203 catgcacattgttggttccttcattg 228  Q
      ||||||||||||||||||||||||    
T  1852057 tttgcacattgttggttccttcattg 1852032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 17996570 - 17996681
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  17996570 cttttcattttgtctaatgtaaatattggcaaaaattcctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 17996669  T
Q  202 acatgcacattg 213  Q
    |  |||||||||    
T  17996670 atctgcacattg 17996681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 31296089 - 31295998
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  31296089 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 31295998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 19447993 - 19448119
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| | ||||| |||||||||||  ||||||| |||||||||||||  |||||||||||||  ||||    
T  19447993 cttttcattttgtctgatgtaaatattgacaaaaatcctttttttgttagtctatgaaacttgcaatctcttttataaacttaactattatgtatcgtta 19448092  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  19448093 atctgcacattgttggttccttcattg 19448119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 27065862 - 27065980
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| |||| |||||||||| ||||    
T  27065862 cttttcattttgtctggtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaattattatgtaacgtta 27065961  T
Q  202 acatgcacattgttggttc 220  Q
    |  | ||||||||||||||    
T  27065962 atctacacattgttggttc 27065980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 9702056 - 9702139
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  9702056 gcagagaacgtgtcatggaagaagatggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttc 9702139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 41780634 - 41780723
Alignment:
Q  12 agagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  41780634 agagagcgtgtgatggaataaggtggtaagctcatcttttatctcgaaaagtcatcgaagaactagcacgttcgagttgttccaaagtag 41780723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 12588691 - 12588604
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||| ||||||||||||| |||||||    
T  12588691 agaacgtgtgatggaagaaggtggtaagctcatctttgattttgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 12588604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 20757951 - 20758062
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| ||||||  |||||||||||||| |||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  20757951 cttttcattttgtctaatgtaaatattggcaaaaatcgctttttggttagtcaatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 20758050  T
Q  202 acatgcacattg 213  Q
    |  |||||||||    
T  20758051 atctgcacattg 20758062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 21029912 - 21030003
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||| |||||||    
T  21029912 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcaagttcgagttgttccaaagtag 21030003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 20996353 - 20996276
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  20996353 aacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcacgttcgagttgttc 20996276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 38934287 - 38934372
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||  |||||||||||| |||||||    
T  38934287 aacgagtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatagaagaaattgcaaattcgagttgttccaaagtag 38934372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 19395167 - 19395251
Alignment:
Q  17 acgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||  ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  19395167 acgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcaagttgttctaaagtag 19395251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 3397553 - 3397462
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  3397553 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 3397462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 7285481 - 7285572
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  7285481 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 7285572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 10513516 - 10513425
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||  |||||||||||| |||||||    
T  10513516 gcagagaacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacaaaagaacttgcaaattcgagttgttccaaagtag 10513425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 21030098 - 21030225
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcct-ttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtt 200  Q
    |||||||||||||||   ||||||||||  |||||| ||  ||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||    
T  21030098 cttttcattttgtctagagtaaatattgacaaaaatcccccttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtt 21030197  T
Q  201 aacatgcacattgttggttccttcattg 228  Q
    ||  |||||||||||||||| |||||||    
T  21030198 aatctgcacattgttggttctttcattg 21030225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 12588509 - 12588400
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||| ||||| ||||||||||||||| | |||| | ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  12588509 ctttttattttatctgatgtaaatattagcaaaa-tccctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 12588411  T
Q  202 acatgcacatt 212  Q
    |  ||||||||    
T  12588410 atctgcacatt 12588400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 3210603 - 3210534
Alignment:
Q  22 tgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgt 91  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  3210603 tgatggaagaatgtggtaagctcatctttgatctcaaaaagtcatcgaagaacttgcacgttcgagttgt 3210534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 17996390 - 17996475
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  17996390 aacgagtgatggaagaaggtggtaaactcatatttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 17996475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 33611549 - 33611464
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  33611549 aacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 33611464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 3151008 - 3150928
Alignment:
Q  21 gtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  3151008 gtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 3150928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 1852345 - 1852254
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||  |||||||||||| |||||||    
T  1852345 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacataagaacttgcaaattcgagttgttccaaagtag 1852254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 26321490 - 26321399
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||| |  |||||||||||| |||||||    
T  26321490 gcagataacgagtgatggaagaaggtggtaagctcatctttgatcccgaaaagtcatagaagaacttggaaattcgagttgttccaaagtag 26321399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 35540109 - 35540022
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  35540109 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgttaatttgcacattgttggttccttcattg 35540022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 38934467 - 38934578
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||  |||||| | ||||||||||||| |||  ||||||| ||||||||||||| ||| ||||||||||| ||||    
T  38934467 cttttcattttgtctaatgtaaatattgacaaaaatccatttttggttagtcaatgaaacttgcaatctcttttataaacctacctattatgtaacgtta 38934566  T
Q  202 acatgcacattg 213  Q
    |  |||||||||    
T  38934567 atctgcacattg 38934578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 10513330 - 10513253
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataa 179  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||  ||||||| ||||||||||||    
T  10513330 cttttcattttgtctaatgtaaatattggcaaaaattcctctttggttagtctatgaaacttgcaatctcttttataa 10513253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 2194969 - 2195052
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||| |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||  ||||||||||||    
T  2194969 gcagataacgagtgatggaagaaggtggtaagctcatcttggatctcgaaaagtcacagaagaacttgcaaattcgagttgttc 2195052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 4882077 - 4882160
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| |  ||||||||||||    
T  4882077 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgaaaattcgagttgttc 4882160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 19447807 - 19447898
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||| ||||||||| |||||| |||||||||||  ||||||||||||  |||||||||||| |||||||    
T  19447807 gcagataacgagtgatggaagaaggtgataagctcatctttgatttcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 19447898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 93
Target Start/End: Original strand, 20349727 - 20349810
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||||||  || |||||||||    
T  20349727 gcagagaacgagtgatagaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaatttgagttgttc 20349810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 34374570 - 34374483
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||||  |||| |||||||||||||||||||    
T  34374570 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgttaatctgcatattgttggttccttcattg 34374483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 20757771 - 20757856
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||||||   |||||||||||  |||||||||||| |||||||    
T  20757771 aacgagtgatgaaagaaggtggtaagatcatatttgatctcgaaaagtcacataagaacttgcaaattcgagttgttccaaagtag 20757856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 3028555 - 3028645
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||  |||||||||||  |||||||    
T  3028555 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaag-cacagaagaacttgcaaattcgagttgttacaaagtag 3028645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 30689113 - 30689204
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||||  ||||||  ||||  |||||||||||| |||||||    
T  30689113 gcagataacgagtgatggaagaaggtggtaaactcatctttgatctcgaaaagtcacagaagaaagtgcaaattcgagttgttccaaagtag 30689204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 287389 - 287341
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcga 58  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  287389 gcagagaacgtgtgatggaagaaggtggtaagctcatctttgatctcga 287341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 27065704 - 27065793
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||  ||| ||||||||||||||||||  |||||| || ||  |||||||||||  |||||||    
T  27065704 gcagataacgagtgatggaagaaggtggtaag--catctttgatctcgaaaagtcacagaagaatttacaaattcgagttgttgcaaagtag 27065793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 290410 - 290453
Alignment:
Q  8 cagcagagaacgtgtgatggaagaaggtggtaagctcatatttg 51  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||    
T  290410 cagcagagaacatgtgatggaagaaggtggtaagctcatctttg 290453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 10512524 - 10512467
Alignment:
Q  171 cttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    |||||||||| |||||||||||||||  ||||  ||||||||||||||| ||||||||    
T  10512524 cttttataaacctaactattatgtaaccttaatctgcacattgttggtttcttcattg 10512467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 100624 - 100750
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  100624 cttttcattttttctaatgtaaatattggcaaaaatccctttttggttagtctatgacacttgcagtctcttttataaacctaactattatgtaatgtta 100723  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  100724 atctgcacattgttggttccttcattg 100750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 5e-44; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 41977227 - 41977357
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  41977227 cttttcattttgtctgatgtaaatattggcaaaaatctctttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 41977326  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  ||||||||||| ||||||||||||||||    
T  41977327 atctgcacattgttagttccttcattgattc 41977357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 12760243 - 12760372
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |||| ||||||| ||||||||| ||||||||||||||| ||||    
T  12760243 cttttcattttgtctgatataaatattggcaaaaatccctttttggttagtctatgacactagcagtcttttttataaacctaactattatgtaacgtta 12760342  T
Q  202 acatgcacattgttggttccttcattgatt 231  Q
    |  |||||||||||||||||||||||||||    
T  12760343 atctgcacattgttggttccttcattgatt 12760372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 6477712 - 6477582
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||||    
T  6477712 cttttcattttgtctggtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaatgtta 6477613  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  |||||||  |||||||||||||||||||    
T  6477612 atctgcacatcattggttccttcattgattc 6477582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 12250418 - 12250296
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  12250418 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 12250319  T
Q  202 acatgcacattgttggttccttc 224  Q
    | |||||||||||||||||||||    
T  12250318 atatgcacattgttggttccttc 12250296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 14079049 - 14078923
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  14079049 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 14078950  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  14078949 atctgtacattgttggttccttcattg 14078923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 29433807 - 29433933
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||| |||||||||||| |  |||||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||    
T  29433807 cttttcattttgtttgatgtaaatatcgacaaaaatccctttttggttagtctatgactcttgcagtctcttttataaacctaactattatgtaatgtta 29433906  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  29433907 atctgcacattgttggttccttcattg 29433933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 39204399 - 39204525
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||||||| |||| |||||||| ||||||||||||| ||||||||||||||| ||||    
T  39204399 cttttcattttatctgatgtaaatattggcaaaaatccctttttggttagtttatgacacttgcaatctcttttataaacctaactattatgtaacgtta 39204498  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||||||||||||    
T  39204499 atctgcacattgttggttccttcattg 39204525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 39444789 - 39444911
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  39444789 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 39444888  T
Q  202 acatgcacattgttggttccttc 224  Q
    | |||||||||||||||||||||    
T  39444889 atatgcacattgttggttccttc 39444911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 41907625 - 41907743
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  ||||||  ||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  41907625 cttttcattttgtctgatgtaaatattgtcaaaaatctcttttcggttagtctatgacacttgcagtctcttttataaacctaactattatgtaatgtta 41907724  T
Q  202 acatgcacattgttggttc 220  Q
    | |||||||||||||||||    
T  41907725 atatgcacattgttggttc 41907743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 23966739 - 23966608
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  23966739 cttttcattttgtctgatgtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 23966640  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||| ||||||||||||||||||||    
T  23966639 atctgcacattattggttccttcattgattca 23966608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 22947021 - 22946904
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||| ||||    
T  22947021 cttttcattttgtctgatgtaaatattgacaaaaatccctttttggttagtctatgacacttgcattttcttttataaatctaactattatgtaacgtta 22946922  T
Q  202 acatgcacattgttggtt 219  Q
    |  |||||||||||||||    
T  22946921 atctgcacattgttggtt 22946904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 41156407 - 41156536
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||| ||| ||||    
T  41156407 cttttcattttgtctgatgtaaatattgtcaaaaatccctttttggttagtctatgacacttgcagtcttttttataaacctagctattatataacgtta 41156506  T
Q  202 acatgcacattgttggttccttcattgatt 231  Q
    |  ||||||||||||||| |||||||||||    
T  41156507 atctgcacattgttggtttcttcattgatt 41156536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 37029606 - 37029737
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  37029606 cttttcattttgtctgatgtaaatattgacaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 37029705  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||||||||||||||||||| ||||    
T  37029706 atctgcacattgttggttccttcattggttca 37029737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 22333340 - 22333214
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||||||||| ||||||| ||||||| ||||    
T  22333340 cttttcattttgtctggtgtaaatattggcaaaaatccctttttggttagtctatgaaacttgcaatctcttttataaacctaactaatatgtaacgtta 22333241  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||||||||||| |||||||    
T  22333240 atctgcacattgttggttctttcattg 22333214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 38961937 - 38962063
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||| |||||||||||||  |||||||||||||| ||||    
T  38961937 cttttcatcttgtctggtgtaaatattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacttaactattatgtaacgtta 38962036  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  38962037 atctgtacattgttggttccttcattg 38962063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 38992281 - 38992407
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||| |||||||||||||  |||||||||||||| ||||    
T  38992281 cttttcatcttgtctggtgtaaatattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacataactattatgtaacgtta 38992380  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  38992381 atctgtacattgttggttccttcattg 38992407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 41628659 - 41628785
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| ||||   ||||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||| ||||    
T  41628659 cttttcattttgtctgatgtaaatattggcaaaagaccctttttcgttagtctatgacacttgcaatctcttttataaacctaactattatgtaacgtta 41628758  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||| |||||||||||||||    
T  41628759 atctgcacattattggttccttcattg 41628785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 45293796 - 45293670
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||| | ||||||||| |||||||||||| || ||||    
T  45293796 cttttcattttgtctgatgtaaatattggcaaaaatccttttttggttagtctatgacacttgcagttttttttataaacctaactattatgcaacgtta 45293697  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||||||| |||||||||||    
T  45293696 atttgcacattgttgattccttcattg 45293670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 19395782 - 19395657
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||| |||||||||||| |||||| |||||||| ||||||||||  ||||||| |||||||||||||  |||||||||||||| ||||    
T  19395782 cttttcattttgtctggtgtaaatattggcaaaaatccctttttgattagtctatgaaacttgcaatctcttttataaacttaactattatgtaacgtta 19395683  T
Q  202 acatgcacattgttggttccttcatt 227  Q
    |  |||||||||||||||||||||||    
T  19395682 atctgcacattgttggttccttcatt 19395657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 41907438 - 41907531
Alignment:
Q  8 cagcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  41907438 cagcagagaacgtgtgatggaagaaggtggtaagttcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttccaaagtag 41907531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 30826220 - 30826349
Alignment:
Q  103 ttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaac----tattatgtaatg 198  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| |||||    ||||||||||||    
T  30826220 ttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactatatattatgtaatg 30826319  T
Q  199 ttaacatgcacattgttggttccttcattg 228  Q
    ||||  || |||||||||||||||||||||    
T  30826320 ttaatttgtacattgttggttccttcattg 30826349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 6300836 - 6300705
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  6300836 cttttcattttgtctgaagtaaatattggcaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 6300737  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  ||||||||||||||| |||||||| ||||    
T  6300736 atctgcacattgttggtttcttcattggttca 6300705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 33424477 - 33424352
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||   ||    
T  33424477 cttttcattttgtctaatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcagtctcttttataaacctaactattatgtaa-ccta 33424379  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  33424378 atctgtacattgttggttccttcattg 33424352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 39204215 - 39204295
Alignment:
Q  12 agagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgtt 92  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39204215 agagaacgtgtgatggaagaaggtggtaaactcatctttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgtt 39204295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 6301022 - 6300931
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  6301022 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 6300931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 23966925 - 23966834
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  23966925 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 23966834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 37029420 - 37029511
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  37029420 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 37029511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 42061199 - 42061108
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  42061199 gcagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 42061108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 233
Target Start/End: Original strand, 44940210 - 44940341
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  ||||||  |||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| || |    
T  44940210 cttttcattttgtctgatgtaaatattgacaaaaatctctttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtca 44940309  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||| ||||||||||||||| ||||    
T  44940310 atctgcacattattggttccttcattggttca 44940341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 44940025 - 44940115
Alignment:
Q  11 cagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  44940025 cagagaacgtgtgatgatagaaggtggtaagctcatatttggtctcgaaaagtcaccgaagaacttgcacgttcgagttgttctaaagtag 44940115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 42811148 - 42811030
Alignment:
Q  110 tttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcac 209  Q
    |||||||| |||||||||||| ||||| |||||||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| |  ||||  |||||    
T  42811148 tttgtctggtgtaaatattggcaaaaactcctttttggttagcctatgaaacttgcaatctcttttataaacctaactattatgtgactttaatctgcac 42811049  T
Q  210 attgttggttccttcattg 228  Q
    |||||||||||||||||||    
T  42811048 attgttggttccttcattg 42811030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 12250599 - 12250520
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagtt 89  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  12250599 gcagagaacgtgtcatggaagaaggtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcacgttcgagtt 12250520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 23626749 - 23626666
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||| || |||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  23626749 gcagagaacgtgtcatagaagaaggtgataagctcatctttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttc 23626666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 29433621 - 29433712
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||| || |||||||||||||||| |||||||    
T  29433621 gcagagaacgtgtaatggaagaaggtggtaagctcatctttgatctggaaaagtcaccgaagaatttccacgttcgagttgttccaaagtag 29433712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 39444608 - 39444687
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagtt 89  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  39444608 gcagagaacgtgtcatggaagaaggtggtaagctcatctttgatctcgaaaagtcactgaagaacttgcacgttcgagtt 39444687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 41156225 - 41156312
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||| || ||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  41156225 agaacgtgtgttgaaagaaggtggtaagctcatttttgatctcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 41156312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 42061013 - 42060883
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  ||||  |  ||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||    
T  42061013 cttttcattttgtctgatgtaaatattgacaaaatcta-tttttagttagtctttgacacttggagtctcttttataaacctaactattatgtaacgtta 42060915  T
Q  202 acatgcacattgttggttccttcattgattca 233  Q
    |  |||||||| ||| ||||||||||||||||    
T  42060914 atctgcacattattgattccttcattgattca 42060883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 41977048 - 41977132
Alignment:
Q  17 acgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||| ||| ||||||||| |||||||    
T  41977048 acgtgtgatggaagaaggtggtaaactcatctttgatctcgaaaagtcaccgaagaacttgcatgtttgagttgttccaaagtag 41977132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 12760061 - 12760148
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||| ||||||||| |||||||    
T  12760061 agaacctgtgatggaagaaggtggtaagctcatctttgatttcgaaaagtcaccgaagaacttgcatgtttgagttgttccaaagtag 12760148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 14079235 - 14079144
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  14079235 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 14079144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 19247694 - 19247785
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||| || ||||||||||||| |||||||    
T  19247694 gcagagaacatgtgatggaagaaggtggtaagctcatctttgatctcaaaaagtcaccaaagaacttacatgttcgagttgttccaaagtag 19247785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 19320878 - 19320969
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||| || ||||||||||||| |||||||    
T  19320878 gcagagaacatgtgatggaagaaggtggtaagctcatctttgatctcaaaaagtcaccaaagaacttacatgttcgagttgttccaaagtag 19320969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 23523041 - 23522956
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||| ||||| |||||||    
T  23523041 aacgagtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcacagaagaacttgcaaattcgagctgttccaaagtag 23522956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 19247880 - 19248002
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||| ||||||||||||||||||||||| |||||| | |||||||||||||||||  ||||||||| | |||||||||    |||||||||||| ||||    
T  19247880 ctttttattttgtctgatgtaaatattggcaaaaatccttttttggttagtctatgatacttgcagt-ttttttataaa---cactattatgtaacgtta 19247975  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||||||| |||||||||||    
T  19247976 atttgcacattgttgattccttcattg 19248002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 19321064 - 19321186
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||| ||||||||||||||||||||||| |||||| | |||||||||||||||||  ||||||||| | |||||||||    |||||||||||| ||||    
T  19321064 ctttttattttgtctgatgtaaatattggcaaaaatccttttttggttagtctatgatacttgcagt-ttttttataaa---cactattatgtaacgtta 19321159  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||||||| |||||||||||    
T  19321160 atttgcacattgttgattccttcattg 19321186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 19395956 - 19395877
Alignment:
Q  22 tgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  19395956 tgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 19395877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 23522861 - 23522750
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||| ||||||||||||| ||||||  |||||||||||||| |||  ||||||| ||||||||||||| || |||||||| ||| ||||    
T  23522861 cttttcattttgtctaatgtaaatattggcaaaaatcactttttggttagtcaatgaaacttgcaatctcttttataaaccttactattatataacgtta 23522762  T
Q  202 acatgcacattg 213  Q
    |  |||||||||    
T  23522761 atctgcacattg 23522750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 30826033 - 30826124
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||| ||||||||  ||||||||||||  |||||||||||| |||||||    
T  30826033 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcaaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 30826124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 45293982 - 45293891
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||| |||||||||   ||||||||||| ||||||||||||| |||||||    
T  45293982 gcagagaacgtgtgatagaagaaagtggtaagctcatctttgatcttgaaaagtcactaaagaacttgcatgttcgagttgttccaaagtag 45293891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 23626563 - 23626441
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||  ||||||  |||||  ||||||||||| |||||| | ||| ||||||||| ||||||||||| |||  |||    
T  23626563 cttttcattttatctgatgtaaatattgacaaaaatcacttttatgttagtctatgacacttgtaatctattttataaacctaactattatataacatta 23626464  T
Q  202 acatgcacattgttggttccttc 224  Q
    |  ||||||||||||||||||||    
T  23626463 atctgcacattgttggttccttc 23626441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 33424662 - 33424572
Alignment:
Q  11 cagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  33424662 cagataacgagtgatggaagaaagtggtaagctcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 33424572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 22333526 - 22333435
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| ||||||||| |||||||||| ||||| ||||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  22333526 gcagataacgagtgatggaaaaaggtggtaaactcatctttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 22333435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 38993490 - 38993577
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||||  |||| |||||||||||||||||||    
T  38993490 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgttaatctgcatattgttggttccttcattg 38993577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 44599509 - 44599596
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||| |||||||||||  ||||||| ||||||||||||| ||||||||||||||| |||||  |||| |||||||||||||||||||    
T  44599509 tttttagttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgttaatctgcatattgttggttccttcattg 44599596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 41628486 - 41628564
Alignment:
Q  23 gatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||  |||||||||||| |||||||    
T  41628486 gatggaagaaggtggtaagctcatccttgatctcgaaaagtcacagaagaacttgcaaattcgagttgttccaaagtag 41628564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 22947168 - 22947116
Alignment:
Q  49 ttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22947168 ttgatctcgaaaagtcaccgaagaacttgcacgttcgagttgttcaaaagtag 22947116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 42811341 - 42811250
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||| ||||| |||||| |||||||||||  ||||||||||||  || ||||||||| |||||||    
T  42811341 gcagataacgagtgatggaagaaggtggtaaactcatctttgatatcgaaaagtcacagaagaacttgcaaatttgagttgttccaaagtag 42811250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 6477897 - 6477828
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgca 79  Q
    ||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  6477897 gcagataacgagtgatggaaaaaggtggtaagctcatctttgatctcgaaaagtcacagaagaacttgca 6477828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 38961757 - 38961848
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||| | ||||| ||||||||||||||||||   ||| |||||||  |||||||||||| |||||||    
T  38961757 gcagataacgagtgatggaagaaggtggtgatctcatctttgatctcgaaaagtcacataagtacttgcaaattcgagttgttccaaagtag 38961848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 38992101 - 38992192
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||| | ||||| ||||||||||||||||||   ||| |||||||  |||||||||||| |||||||    
T  38992101 gcagataacgagtgatggaagaaggtggtgatctcatctttgatctcgaaaagtcacataagtacttgcaaattcgagttgttccaaagtag 38992192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 46
Target Start/End: Complemental strand, 44383339 - 44383309
Alignment:
Q  16 aacgtgtgatggaagaaggtggtaagctcat 46  Q
    |||||||||||||||||||||||||||||||    
T  44383339 aacgtgtgatggaagaaggtggtaagctcat 44383309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 53199 - 53077
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||    
T  53199 cttttcattttatctgatgtaaatattggcaaaaattctttttttgttagtctatgacacttgtagtctcttttataaacctaactattatgtaacgtta 53100  T
Q  202 acatgcacattgttggttccttc 224  Q
    | |||||||||||||||||||||    
T  53099 atatgcacattgttggttccttc 53077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 53348 - 53301
Alignment:
Q  42 ctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagtt 89  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  53348 ctcatctttgatctcgaaaagtcactgaagaacttgcacgttcgagtt 53301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 10841 - 10711
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||| |||||| ||||| ||||||||| ||||||||||||||| ||||    
T  10841 cttttcattttgtctgatgtaaatattggcgaaaatccctttttcgttagtctatgacacttgaagtcttttttataaacctaactattatgtaacgtta 10742  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    | |||||||||||| ||||||||||||||||    
T  10741 atatgcacattgtttgttccttcattgattc 10711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 10989 - 10936
Alignment:
Q  48 tttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    |||||||||||||||||| |||||||||| ||  |||||||||||| |||||||    
T  10989 tttgatctcgaaaagtcaccgaagaacttacatattcgagttgttccaaagtag 10936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 1358 - 1480
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||  |||||| ||||||||||||||| ||||||||||||||| ||||    
T  1358 cttttcattttatctgatgtaaatattggcaaaaatcccttttttgttagtctataacacttgtagtctcttttataaacctaactattatgtaacgtta 1457  T
Q  202 acatgcacattgttggttccttc 224  Q
    | |||||||||||||||||||||    
T  1458 atatgcacattgttggttccttc 1480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 1179 - 1256
Alignment:
Q  12 agagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagtt 89  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  1179 agagaacgtgtcatggaagaaggtggtaaactcatctttgatctcgaaaagtcactgaagaacttgcacgttcgagtt 1256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 26591 - 26465
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  26591 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 26492  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||| ||||||||    
T  26491 atctgtacattgttggtttcttcattg 26465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 26777 - 26686
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| ||||||| |||||||||||||||||| ||||||||| ||||||||  |||||||||||| ||||||||||||| |||||||    
T  26777 gcagataacgagtgatgggagaaggtggtaagctcatctttgatctcaaaaagtcacagaagaacttgcaagttcgagttgttccaaagtag 26686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 83; Significance: 3e-39; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 152386 - 152260
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||||| || |||||||| ||| ||||    
T  152386 cttttcattttgtctgatgtaaatattggcaaaaatccatttttggttagtctatgacacttgcagtctcttttataaacctgactattatataacgtta 152287  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  ||||||||||||||| ||||||||    
T  152286 atctgcacattgttggttgcttcattg 152260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 64865 - 64739
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||||| ||||  |||| || ||||||||||||| ||||||||||||||| ||||    
T  64865 cttttcattttgtctgatgtaaatattgaaaaaaatccctttttggttagtatatgaaacttacaatctcttttataaacctaactattatgtaacgtta 64766  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||||||||||||||| |||||||    
T  64765 atctgcacattgttggttctttcattg 64739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 65051 - 64971
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttg 90  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  65051 gcagaaaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcatcgaagaacttgcacgtttgagttg 64971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 152572 - 152489
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttc 93  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||| |||||    
T  152572 gcagagaacgtgtgatggaagaaggtggtaaactcatctttgatctcgaaaagttatcgaagaacttgcacgttcgagctgttc 152489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 9952 - 10078
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||| ||||    
T  9952 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctcttttataaacctaactattatgtaacgtta 10051  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||| ||||||||    
T  10052 atctgtacattgttggtttcttcattg 10078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 9766 - 9857
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| ||||||| |||||||||||||||||| ||||||||| ||||||||  |||||||||||| ||||||||||||| |||||||    
T  9766 gcagataacgagtgatgggagaaggtggtaagctcatctttgatctcaaaaagtcacagaagaacttgcaagttcgagttgttccaaagtag 9857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 442 - 568
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  || |||  ||||||||||||| ||||||||||||||| ||||    
T  442 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacctgcgatctcttttataaacctaactattatgtaacgtta 541  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  || |||||||||||||||||||||    
T  542 atctgtacattgttggttccttcattg 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 256 - 347
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||| |  |||||||||||  |||||||    
T  256 gcagataacgagtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcacataagaacttgaaaattcgagttgtttcaaagtag 347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 13162 - 13036
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||||||| ||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||    
T  13162 cttttcattttttctgatgtaaatattggcaaaaatccttttttggttagtctatgacacttgcagtcttttttataaacctaactattatgtaacgtta 13063  T
Q  202 acatgcacattgttggttccttcattg 228  Q
    |  |||| || ||||||||||||||||    
T  13062 atctgcaaatagttggttccttcattg 13036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 13344 - 13257
Alignment:
Q  14 agaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||| ||||||||||||| |||||||    
T  13344 agaacgtgtgatggaagaaggtggtaagctcatctttaatctcgaaaagtcactgaagaacttgcatgttcgagttgttccaaagtag 13257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 119878 - 119968
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagta 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  119878 gcagagaacgtgtgatggaagaaggtggtaagctcatctttgatctcgaaaagtcaccgaagaacttgcacattcgagttgttccaaagta 119968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 30228 - 30103
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    ||||||| ||||||||||||||||||||| ||||||   ||||||||||||||||| |||||||||| | | ||||||| ||||||||||||||| ||||    
T  30228 cttttcaatttgtctgatgtaaatattggcaaaaatctttttttggttagtctatgacacttgcagtttttcttataaacctaactattatgtaacgtta 30129  T
Q  202 acatgcacattgttggttccttcatt 227  Q
    |  |||||||||||| ||||||||||    
T  30128 atctgcacattgttgattccttcatt 30103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 30414 - 30323
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||| | ||||||||||| ||| ||||||||| |||||||    
T  30414 gcagagaacgtgtgatggaagaaggtgataagctcatctttgatcttgaaaagtcaccaaagaacttgcatgtttgagttgttccaaagtag 30323  T

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Target: scaffold0038 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 29434 - 29343
Alignment:
Q  10 gcagagaacgtgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||  ||||||||||||||| |||||||    
T  29434 gcagagaacgtgtgatggaagaaggtgataagctcatctttgatctcgaaaagtcaccgaagaacttatacgttcgagttgttccaaagtag 29343  T

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Target: scaffold0236 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 26509 - 26639
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgtta 201  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||| ||  ||||| | | ||||||||||| |||| |||||||||  ||||    
T  26509 cttttcattttgtctggtgtaaatattggcaaaaatccctttttggttagtctttgaaacttgtaatatcttttataaacctaagtattatgtagcgtta 26608  T
Q  202 acatgcacattgttggttccttcattgattc 232  Q
    |  |||||||||||| ||| |||||||||||    
T  26609 atctgcacattgttgattctttcattgattc 26639  T

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Target: scaffold0385 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 4586 - 4505
Alignment:
Q  20 tgtgatggaagaaggtggtaagctcatatttgatctcgaaaagtcatcgaagaacttgcacgttcgagttgttcaaaagtag 101  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  4586 tgtgatggaagaaggtggtaagctcatctttgatttcgaaaagtcaccgaagaacttgcatgttcgagttgttccaaagtag 4505  T

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Target: scaffold0385; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 202
Target Start/End: Complemental strand, 4410 - 4308
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcag--tctcttttataaatctaactattatgtaatgt 199  Q
    ||||||||||| |||||||||| |||| | ||||   ||||||||||||||||||| |||||||||  | | ||||||||| ||||||||||||||| ||    
T  4410 cttttcattttatctgatgtaagtattagcaaaatcacctttttggttagtctatgacacttgcagttttttttttataaacctaactattatgtaacgt 4311  T
Q  200 taa 202  Q
    |||    
T  4310 taa 4308  T

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Target: scaffold1891 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1891
Description:

Target: scaffold1891; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 41 - 115
Alignment:
Q  102 cttttcattttgtctgatgtaaatattgggaaaaattcctttttggttagtctatggcacttgcagtctctttta 176  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||| |||||||||    
T  41 cttttcattttgtctgatgtaagtattggcaaaaattcctttttggttagtctatgaaacttgcaatctctttta 115  T

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Target: scaffold0110 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 49427 - 49340
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||| |||||||||||  ||||||| ||||||||||||| | ||||||||||||| |||||  ||||||||||||||||||||||||    
T  49427 tttttagttagtctatgaaacttgcaatctcttttataaaccgaactattatgtaacgttaatctgcacattgttggttccttcattg 49340  T

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Target: scaffold0242 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 3646 - 3559
Alignment:
Q  141 tttttggttagtctatggcacttgcagtctcttttataaatctaactattatgtaatgttaacatgcacattgttggttccttcattg 228  Q
    ||||| |||||||||||  ||||||| ||||||||||||| | ||||||||||||| |||||  ||||||||||||||| ||||||||    
T  3646 tttttagttagtctatgaaacttgcaatctcttttataaaccaaactattatgtaacgttaatctgcacattgttggtttcttcattg 3559  T

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