View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0500-INSERTION-21 (Length: 607)

Name: NF0500-INSERTION-21
Description: NF0500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0500-INSERTION-21
NF0500-INSERTION-21
[»] chr2 (22 HSPs)
chr2 (46-601)||(41876807-41877355)
chr2 (47-194)||(39338516-39338664)
chr2 (47-200)||(387455-387608)
chr2 (62-194)||(10524392-10524523)
chr2 (106-200)||(14436916-14437010)
chr2 (102-200)||(14106172-14106269)
chr2 (47-169)||(22888572-22888694)
chr2 (55-200)||(5254540-5254684)
chr2 (103-194)||(3745676-3745767)
chr2 (104-193)||(13512495-13512584)
chr2 (55-200)||(14405487-14405630)
chr2 (105-194)||(43816102-43816191)
chr2 (102-200)||(7874610-7874709)
chr2 (102-177)||(17116560-17116635)
chr2 (105-200)||(43248876-43248971)
chr2 (123-194)||(15457817-15457888)
chr2 (102-200)||(7461010-7461107)
chr2 (103-192)||(45311461-45311550)
chr2 (130-193)||(25280971-25281034)
chr2 (1-30)||(41877366-41877395)
chr2 (117-193)||(7455601-7455676)
chr2 (134-194)||(9823695-9823755)
[»] chr7 (23 HSPs)
chr7 (47-194)||(5859938-5860085)
chr7 (51-194)||(31971790-31971933)
chr7 (47-193)||(44353220-44353366)
chr7 (51-194)||(10244463-10244606)
chr7 (51-164)||(38306543-38306656)
chr7 (47-200)||(42454383-42454536)
chr7 (54-194)||(33434486-33434626)
chr7 (46-194)||(47325540-47325687)
chr7 (49-200)||(3419048-3419197)
chr7 (47-194)||(37795275-37795422)
chr7 (47-194)||(37795603-37795750)
chr7 (51-194)||(3867398-3867540)
chr7 (49-186)||(3419321-3419456)
chr7 (62-200)||(6585180-6585318)
chr7 (46-194)||(25161087-25161234)
chr7 (47-194)||(41089401-41089545)
chr7 (55-200)||(34391469-34391614)
chr7 (47-152)||(40726202-40726307)
chr7 (47-194)||(43482184-43482330)
chr7 (101-200)||(48161690-48161788)
chr7 (135-200)||(31756319-31756384)
chr7 (103-194)||(11378776-11378866)
chr7 (132-200)||(35745481-35745549)
[»] chr1 (15 HSPs)
chr1 (47-194)||(30685579-30685726)
chr1 (51-194)||(31584695-31584837)
chr1 (54-194)||(24449586-24449725)
chr1 (48-193)||(46814121-46814266)
chr1 (51-193)||(5389084-5389221)
chr1 (51-165)||(5459443-5459557)
chr1 (51-194)||(24684148-24684290)
chr1 (62-200)||(40216155-40216293)
chr1 (51-200)||(41920740-41920889)
chr1 (51-149)||(46692519-46692618)
chr1 (56-193)||(6804825-6804962)
chr1 (47-194)||(7002468-7002613)
chr1 (105-200)||(27031490-27031585)
chr1 (103-194)||(14320658-14320749)
chr1 (55-151)||(24659217-24659313)
[»] chr8 (23 HSPs)
chr8 (51-194)||(12897931-12898074)
chr8 (47-193)||(20138705-20138851)
chr8 (51-200)||(9519789-9519938)
chr8 (47-194)||(31207017-31207164)
chr8 (51-194)||(32065940-32066082)
chr8 (51-194)||(22773904-22774047)
chr8 (47-193)||(36631102-36631247)
chr8 (51-200)||(24995044-24995193)
chr8 (47-171)||(27889125-27889249)
chr8 (47-171)||(27947783-27947907)
chr8 (51-194)||(37986510-37986653)
chr8 (62-200)||(3584031-3584170)
chr8 (107-200)||(13538324-13538417)
chr8 (107-200)||(13686057-13686150)
chr8 (48-200)||(15821026-15821177)
chr8 (48-194)||(35815899-35816045)
chr8 (53-194)||(16457130-16457270)
chr8 (51-142)||(34388714-34388805)
chr8 (47-194)||(35821535-35821680)
chr8 (47-200)||(41893052-41893206)
chr8 (55-200)||(38577435-38577580)
chr8 (144-194)||(9659478-9659528)
chr8 (102-168)||(10837918-10837984)
[»] chr3 (22 HSPs)
chr3 (47-193)||(2392159-2392305)
chr3 (47-193)||(2393922-2394068)
chr3 (46-200)||(47235976-47236130)
chr3 (51-194)||(31483163-31483306)
chr3 (47-194)||(45164133-45164279)
chr3 (47-191)||(34475416-34475560)
chr3 (48-200)||(40023218-40023370)
chr3 (47-194)||(19176785-19176932)
chr3 (62-169)||(30352119-30352226)
chr3 (47-169)||(43012656-43012778)
chr3 (62-192)||(9583710-9583840)
chr3 (47-193)||(17551236-17551382)
chr3 (67-200)||(50305223-50305356)
chr3 (47-200)||(53248179-53248332)
chr3 (55-200)||(21343635-21343779)
chr3 (103-194)||(4463740-4463831)
chr3 (105-200)||(25506719-25506814)
chr3 (102-200)||(23327997-23328095)
chr3 (102-200)||(50559978-50560076)
chr3 (102-200)||(45399119-45399217)
chr3 (82-194)||(37158618-37158731)
chr3 (144-200)||(39020991-39021046)
[»] chr4 (19 HSPs)
chr4 (51-194)||(27555585-27555729)
chr4 (47-200)||(30964716-30964869)
chr4 (63-194)||(35329302-35329433)
chr4 (51-200)||(36689454-36689603)
chr4 (46-177)||(20464867-20464998)
chr4 (47-194)||(8255306-8255453)
chr4 (47-194)||(8268724-8268871)
chr4 (63-194)||(11281380-11281511)
chr4 (47-200)||(30167212-30167367)
chr4 (57-200)||(35341000-35341143)
chr4 (47-194)||(8705795-8705938)
chr4 (101-194)||(7703020-7703112)
chr4 (103-200)||(46698428-46698525)
chr4 (105-200)||(2826118-2826213)
chr4 (55-194)||(4305994-4306130)
chr4 (103-194)||(49528421-49528512)
chr4 (102-194)||(31050316-31050408)
chr4 (117-200)||(9750116-9750198)
chr4 (102-200)||(52868760-52868859)
[»] chr5 (10 HSPs)
chr5 (47-194)||(7161669-7161816)
chr5 (55-194)||(18593529-18593668)
chr5 (51-200)||(34378382-34378531)
chr5 (47-163)||(29087757-29087873)
chr5 (47-193)||(5656749-5656895)
chr5 (62-200)||(698661-698799)
chr5 (93-194)||(7452913-7453014)
chr5 (47-193)||(18313310-18313446)
chr5 (103-149)||(41250893-41250939)
chr5 (107-194)||(18255105-18255192)
[»] scaffold0434 (1 HSPs)
scaffold0434 (51-177)||(2345-2471)
[»] scaffold0085 (1 HSPs)
scaffold0085 (47-194)||(48614-48761)
[»] chr6 (7 HSPs)
chr6 (47-194)||(3254236-3254383)
chr6 (47-194)||(15944278-15944425)
chr6 (51-194)||(3117777-3117920)
chr6 (51-193)||(10542114-10542255)
chr6 (103-158)||(33697788-33697843)
chr6 (116-200)||(15132489-15132573)
chr6 (47-99)||(14663359-14663411)
[»] scaffold0343 (1 HSPs)
scaffold0343 (53-194)||(5989-6131)
[»] scaffold0172 (1 HSPs)
scaffold0172 (47-194)||(19197-19344)


Alignment Details
Target: chr2 (Bit Score: 394; Significance: 0; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 46 - 601
Target Start/End: Complemental strand, 41877355 - 41876807
Alignment:
Q  46 aagtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatatt 145  Q
    |||| ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41877355 aagtttgttttaggcagtgatgtgttttagagggtttatcttcaggggtgttttcaggtggttatggtgtaccgtctatatacggtaccatttgtatatt 41877256  T
Q  146 gtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgattnnnnnnnnn-----gtatccttctcattgccatccataaatgaaa 240  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||              ||||||||||| |||||||||||||||||||    
T  41877255 gtttcgtccatatcttgcgtcttgcggggatggagtttaataatatttgttgattaaaaaaaaaaaaaagtatccttctcgttgccatccataaatgaaa 41877156  T
Q  241 gagcatgcaccatgttgcaaaagcaagaagactccaaaattgaaatgactcactaactctccccttttctccttgtgcagcttcattggcgcgtaatagt 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41877155 gagcatgcaccatgttgcaaaagcaagaagactccaaaattgaaatgactcgctaactctccccttttctccttgtgtagcttcattggcgcgtaatagt 41877056  T
Q  341 ggttatagatcctttagactttagttgtggtcagcttagcatagctcttgcatccttgagtccccttcctagcagaatcataaagtagataaattcaata 440  Q
    |||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41877055 ggttatagatcct-------ttagttgtggtcagcttagcatagctcttgcatccttgagtccccttcctagcagaatcataaagtagataaattcaata 41876963  T
Q  441 ctacaaagagacggtgaaccacgtggtcgagtgtaaaaaattggtatgaacacatccaaactaaacacnnnnnnnnngttcccgatttgagttgcttcaa 540  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||    
T  41876962 ctacaaagagacggtgaaccacgtggttgagtgt--aaaattggtatgaacacatccaaactaaacacttttttt---ttcccgatttgagttgcttcaa 41876868  T
Q  541 cttgcatttttctattgagtttgctctattttgaacaactattagaaaagatgcaataagt 601  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  41876867 cttgcatttttctattgagtttgctctattttgaacaactattggaaatgatgcaataagt 41876807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 39338664 - 39338516
Alignment:
Q  47 agtctgttttaggtag-tgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatatt 145  Q
    |||||||||||||| | ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  39338664 agtctgttttaggtgggtgatgtgttttggtgggtttatcttcaggggtgttttcaggtggttatggtgtaccgtctatatgcggcaccatttgtatctt 39338565  T
Q  146 gtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||||  |||||||||  |  ||||| |||||||||||||||    
T  39338564 gtttcgtccatacattgcgtcttacgatgatggcgtttaataatatttg 39338516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 387455 - 387608
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| ||||||||||| | ||||||||| | |||||||||||||||||||||||||||| ||||||||||| |||    
T  387455 agtctgttttaggtggtgatgtgttttggtgggtttatcttcatgggtgtttttaagtggttatggtgtaccgtctatatgcggcaccatttgtatcttg 387554  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||||| | |||| |||| || ||||  |||||||||||| ||| ||||    
T  387555 tttcgtccataccctgcgacttgcggtgatgacgtttaataatatctgtcgatt 387608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 10524392 - 10524523
Alignment:
Q  62 gtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatctt 161  Q
    |||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||| | |||||||||||||||||||||||||| |||    
T  10524392 gtgacgtgttttggtgggtttatcttcaggggtgtttttaggtggttatggtgtaccatctatatgctgcaccatttgtatattgtttcgtccatacctt 10524491  T
Q  162 gcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||  ||| ||| |||||||||||||||    
T  10524492 gcgtcttgcaggg-tggcgtttaataatatttg 10524523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 14437010 - 14436916
Alignment:
Q  106 gttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||||    
T  14437010 gttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaataatatttgctgatt 14436916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 14106269 - 14106172
Alignment:
Q  102 ggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||| | ||||||||| | |||||| ||||||||||||||| |||||    
T  14106269 ggtggttatggtgtaccgtctatatgcggcaccatttctatcttgtttcgt-cataccctgcgtcttgcgaggatggcgtttaataatatttgctgatt 14106172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 47 - 169
Target Start/End: Complemental strand, 22888694 - 22888572
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||| ||||||| ||||||||||| ||||||||| | || |||||||| | ||||||||||||| || ||||||| ||  |||    
T  22888694 agtctgttttaggtggtgatgcgttttggtgggtttatcttcaggggtgttcttagttggttatgatataccgtctatatgtggcaccatttctaccttg 22888595  T
Q  147 tttcgtccatatcttgcgtcttg 169  Q
    |||| ||||||  ||||||||||    
T  22888594 tttcatccatacattgcgtcttg 22888572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 55 - 200
Target Start/End: Original strand, 5254540 - 5254684
Alignment:
Q  55 ttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtcc 154  Q
    |||||| |||||||||||||| ||||||||||| | | |  || |  || |||||||||||||||||||||||||| |||||||||||  | ||||||||    
T  5254540 ttaggtggtgatgtgttttggtgggtttatcttcatgagctttgtttggaggttatggtgtaccgtctatatgcggcaccatttgtat-ctatttcgtcc 5254638  T
Q  155 atatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||| ||| ||||||| | |||||  ||||||||||||||| |||||    
T  5254639 ataccttacgtcttgcgaggatgacgtttaataatatttgctgatt 5254684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 3745676 - 3745767
Alignment:
Q  103 gtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||| |||||| ||||||||| | ||||||||||| |||||||||||||| |||||||||| ||||||||   ||||||||||||||    
T  3745676 gtggttatgatgtaccatctatatgcagcaccatttgtatcttgtttcgtccataccttgcgtcttatggggatgacatttaataatatttg 3745767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 104 - 193
Target Start/End: Complemental strand, 13512584 - 13512495
Alignment:
Q  104 tggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    |||||||| |||||||||||||||||| | ||||||||| ||||||||||||||  |||||||||| ||| |||  ||||||||||||||    
T  13512584 tggttatgttgtaccgtctatatgcggcatcatttgtattttgtttcgtccatacattgcgtcttgcgggaatgacgtttaataatattt 13512495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 55 - 200
Target Start/End: Original strand, 14405487 - 14405630
Alignment:
Q  55 ttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtcc 154  Q
    |||||| ||||||||||||||  |||| |||||||||||  || | |||||||||||||||||||||||||||| | ||||||||||| ||| ||||| |    
T  14405487 ttaggtggtgatgtgttttggtaggtt-atctttaggggctttgttaggtggttatggtgtaccgtctatatgcagcaccatttgtatcttg-ttcgttc 14405584  T
Q  155 atatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||| ||| |||||||  || ||   ||||||||||||||| |||||    
T  14405585 ataccttacgtcttgcaggaataacgtttaataatatttgctgatt 14405630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 43816191 - 43816102
Alignment:
Q  105 ggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||||||||||||||||||||||||| | ||||||||  |||||||||||||| ||||||| ||| ||| |||  |||||||||||||||    
T  43816191 ggttatggtgtaccgtctatatgcggcatcatttgtactttgtttcgtccataccttgcgttttgcgggaatgacgtttaataatatttg 43816102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 7874610 - 7874709
Alignment:
Q  102 ggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggag-tttaataatatttgttgatt 200  Q
    |||||||||||||||||||||||||||||  |||||||||| |||||| ||| ||| |||| |||||| | |||||| | |||||||||||||| |||||    
T  7874610 ggtggttatggtgtaccgtctatatgcggcgccatttgtatcttgttttgtctataccttgtgtcttgcgaggatggcgttttaataatatttgctgatt 7874709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 17116635 - 17116560
Alignment:
Q  102 ggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatg 177  Q
    ||||||||| ||||||||||||||||||| | ||||||||| |||| ||||||||| ||||||||||| |||||||    
T  17116635 ggtggttatagtgtaccgtctatatgcggcatcatttgtatcttgtctcgtccataccttgcgtcttgcggggatg 17116560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 43248971 - 43248876
Alignment:
Q  105 ggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||| | ||||||||||||||||  |||||| ||| |||||||||||||| |||| |||||||| |||||  ||||||||||||||| |||||    
T  43248971 ggttatgatataccgtctatatgcggcgccatttatatcttgtttcgtccataccttgtgtcttgtgaggatgacgtttaataatatttgatgatt 43248876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 15457817 - 15457888
Alignment:
Q  123 atatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||  |||||||| ||||||    
T  15457817 atatgcggcaccatttgtatcttgtttcgtccatatcatgcgtcttgcggggatgacgtttaatattatttg 15457888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 7461010 - 7461107
Alignment:
Q  102 ggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    |||||||||||||||| ||||||||||   ||||||||||| ||||||||| ||||   ||||||||| |||||||  ||||||||||||||| |||||    
T  7461010 ggtggttatggtgtactgtctatatgcaacaccatttgtattttgtttcgt-catactctgcgtcttgcggggatgacgtttaataatatttgctgatt 7461107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 45311550 - 45311461
Alignment:
Q  103 gtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatt 192  Q
    ||||||||||||| |||| |||||| || ||||||||||| ||||||||||| |  ||||| ||||| |||| ||| |||||||||||||    
T  45311550 gtggttatggtgttccgtatatatgtggcaccatttgtatcttgtttcgtcctttccttgcatcttgcggggttggcgtttaataatatt 45311461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 25281034 - 25280971
Alignment:
Q  130 gtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    ||||||||| ||| |||||||||||||| | |||||||||||||||||  ||||||||||||||    
T  25281034 gtaccatttatatcttgtttcgtccataccctgcgtcttgtggggatgacgtttaataatattt 25280971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 41877395 - 41877366
Alignment:
Q  1 gctattagtatccttctcattgcgtgcttg 30  Q
    ||||||||||||||||||||||||||||||    
T  41877395 gctattagtatccttctcattgcgtgcttg 41877366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 7455601 - 7455676
Alignment:
Q  117 ccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    |||||||| ||||| ||||||||||| || |||||| |||| | ||||||||| |||||||  |||||||| |||||    
T  7455601 ccgtctatttgcggcaccatttgtatcttatttcgttcata-cctgcgtcttgcggggatgacgtttaatattattt 7455676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 9823695 - 9823755
Alignment:
Q  134 catttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||| ||||||| | |||| |||| |||||| || ||||| |||||||||||||||    
T  9823695 catttgtatcttgtttcattcataccttgtgtcttgcggagatggcgtttaataatatttg 9823755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 6e-54; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 5860085 - 5859938
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||    
T  5860085 agtctgttttaggtggtgatgtgttttggtgggattatctttaggggtgtttttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttg 5859986  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||||| ||||||||| |||||||  |||||||||||||||    
T  5859985 tttcgtccatatcatgcgtcttgcggggatgacgtttaataatatttg 5859938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 31971933 - 31971790
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| || ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  31971933 tgttttaggtggttatgtgttttggtgggtttatcttcaggggtgtttttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttc 31971834  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||    
T  31971833 gtccataccttgcgtcttgcggggatggcgtttaataatatttg 31971790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 44353366 - 44353220
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| ||||||||||  | ||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||    
T  44353366 agtctgttttaggtggtgatgtgttttggtgggtttatctccatgggtgtttttaggtggttatggtgtaccatctatatgcggcaccatttgtatcttg 44353267  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    |||||||||||  |||||||||| |||||||| ||||||||||||||    
T  44353266 tttcgtccatactttgcgtcttgcggggatggcgtttaataatattt 44353220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 51 - 194
Target Start/End: Original strand, 10244463 - 10244606
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| |||||||||||| | ||  ||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| |||||||    
T  10244463 tgttttaggtggtgatgtgttttcgtggacttatcttcaggggtgtttttaggtggttatggtgtactgtctatatgcggcaccatttgtatcttgtttc 10244562  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||| ||||||||||| || |||||||||||||||||||||    
T  10244563 gtccataccttgcgtcttgcggagatggagtttaataatatttg 10244606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 38306543 - 38306656
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  38306543 tgttttaggtggtgatgtgttttggttggtttatctttaggggtgtttttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttc 38306642  T
Q  151 gtccatatcttgcg 164  Q
    ||||||| ||||||    
T  38306643 gtccataccttgcg 38306656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 42454536 - 42454383
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||||  |||||||||||| ||||||||||| | || | |||| ||||||||||||||||| |||||||||||| ||||||||||  |||    
T  42454536 agtctgttttaggtaaggatgtgttttggtgggtttatcttcaaggatttttttaggtggttatggtgtactgtctatatgcggcaccatttgtaccttg 42454437  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||| ||||||||||||||| |||||||  ||||||||||||||| |||||    
T  42454436 tttcgtctatatcttgcgtcttgcggggatgatgtttaataatatttgctgatt 42454383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 54 - 194
Target Start/End: Complemental strand, 33434626 - 33434486
Alignment:
Q  54 tttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtc 153  Q
    ||||||| |||||||||||||| |||||||| |  ||||||||||| |||||||||||||||||||||||||| | | ||||||||||| ||| ||||||    
T  33434626 tttaggtggtgatgtgttttggtgggtttatttccaggggtgtttttaggtggttatggtgtaccgtctatatacagaaccatttgtatcttgcttcgtc 33434527  T
Q  154 catatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||| ||||||| ||| |||||||| |||||||||||||||    
T  33434526 cataccttgcgtattgcggggatggcgtttaataatatttg 33434486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 46 - 194
Target Start/End: Complemental strand, 47325687 - 47325540
Alignment:
Q  46 aagtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatatt 145  Q
    |||| |||||||||| |||||||||||||| ||||||||||| || | |||||| |||||||||||||||||||||||||||| | ||||||||||| ||    
T  47325687 aagtttgttttaggtggtgatgtgttttggtgggtttatcttcagag-tgtttttaggtggttatggtgtaccgtctatatgcagcaccatttgtatctt 47325589  T
Q  146 gtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||||||||||| ||||||||||  | |||||  |||||||||||||||    
T  47325588 gtttcgtccataccttgcgtcttacgaggatgacgtttaataatatttg 47325540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 3419197 - 3419048
Alignment:
Q  49 tctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtt 148  Q
    |||||||||||| ||| |||||||||| | ||||||||| ||| ||||||| |||||||||||||||||||||  ||||||| | | ||||||| |||||    
T  3419197 tctgttttaggtggtgttgtgttttggtgagtttatcttcaggagtgtttttaggtggttatggtgtaccgtc--tatgcggcaacgtttgtatcttgtt 3419100  T
Q  149 tcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||| ||||||||||| |||||||  |||||||||||||||| ||||    
T  3419099 tcgtccataccttgcgtcttgcggggatgacgtttaataatatttgtcgatt 3419048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 37795275 - 37795422
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| ||||| |||||| | ||||||||||| | ||||||||| |||||||||||||||||||| ||   |||  ||||||||||| |||    
T  37795275 agtctgttttaggtggtgatatgtttttgtgggtttatcttcatgggtgtttttaggtggttatggtgtaccgtttaatcgcgacaccatttgtatcttg 37795374  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||| ||||||||||||||||| |  |||||||||||||||    
T  37795375 tttcgtccataccttgcgtcttgtggggacgacgtttaataatatttg 37795422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 37795603 - 37795750
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| ||||| |||||| | ||||||||||| | ||||||||| |||||||||||||||||||| ||   |||  ||||||||||| |||    
T  37795603 agtctgttttaggtggtgatatgtttttgtgggtttatcttcatgggtgtttttaggtggttatggtgtaccgtttaatcgcgacaccatttgtatcttg 37795702  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||| ||||||||||||||||| |  |||||||||||||||    
T  37795703 tttcgtccataccttgcgtcttgtggggacgacgtttaataatatttg 37795750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 51 - 194
Target Start/End: Original strand, 3867398 - 3867540
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||| ||| |||||||||||||| | ||||||||| ||||||||||| | || |||||||||||||||||||||| || ||||||||||| |||||||    
T  3867398 tgttttgggtggtgatgtgttttggtgagtttatcttcaggggtgtttttatgttgttatggtgtaccgtctatatgtggcaccatttgtatcttgtttc 3867497  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||| ||| ||| |||||||  |||||| ||||||||||||||||    
T  3867498 gtcaataccttacgtcttg-cgggatgaagtttaataatatttg 3867540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 49 - 186
Target Start/End: Complemental strand, 3419456 - 3419321
Alignment:
Q  49 tctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtt 148  Q
    |||||||||||| ||| |||||||||| | ||||||||| ||| ||||||| |||||||||||||||||||||  ||||||| | | ||||||| |||||    
T  3419456 tctgttttaggtggtgttgtgttttggtgagtttatcttcaggagtgtttttaggtggttatggtgtaccgtc--tatgcggcaacgtttgtatcttgtt 3419359  T
Q  149 tcgtccatatcttgcgtcttgtggggatggagtttaat 186  Q
    ||||||||| ||||||||||| |||||||| |||||||    
T  3419358 tcgtccataccttgcgtcttgcggggatggcgtttaat 3419321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 6585180 - 6585318
Alignment:
Q  62 gtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatctt 161  Q
    ||||||||||| || || |||||||| |||||| || |  |||||||||||||||||||||||||| || ||||||||||| |||||||||||||  |||    
T  6585180 gtgatgtgtttaggtggctttatcttcaggggttttgtttggtggttatggtgtaccgtctatatgtggcaccatttgtatcttgtttcgtccattcctt 6585279  T
Q  162 gcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    || ||||| |||||||| ||||||||||||||| |||||    
T  6585280 gcatcttgcggggatggcgtttaataatatttgctgatt 6585318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 25161087 - 25161234
Alignment:
Q  46 aagtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatatt 145  Q
    ||||||||||||||| |||||||||||||| ||||||||||  |||| |||||| |||||||||||||||||||||||||| ||| |||||||| || ||    
T  25161087 aagtctgttttaggtggtgatgtgttttggtgggtttatctccaggg-tgtttttaggtggttatggtgtaccgtctatatacggcaccatttgcatctt 25161185  T
Q  146 gtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||| |||| |||   ||||  |||||||  |||||||||||||||    
T  25161186 gtttcgttcataccttaaatcttacggggatgacgtttaataatatttg 25161234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 41089545 - 41089401
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    ||||||||||||||  ||||||||||||| || |||||||| | ||||||||| |||||||||||||||||||||||||||||| |||| |||||| |||    
T  41089545 agtctgttttaggtgatgatgtgttttggtggatttatcttcatgggtgtttttaggtggttatggtgtaccgtctatatgcggcacca-ttgtatcttg 41089447  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||| |||  ||||||  | |||||  ||||||||||||||    
T  41089446 tttcgtccatacctt--gtcttgcagagatggcatttaataatatttg 41089401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 55 - 200
Target Start/End: Original strand, 34391469 - 34391614
Alignment:
Q  55 ttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtcc 154  Q
    |||||| |||||||||||||| ||||||||||| |||||  || |  ||||||||||||||| ||||||||||||| |  |||||||| |||||||||||    
T  34391469 ttaggtggtgatgtgttttggtgggtttatcttcaggggctttgtttggtggttatggtgtatcgtctatatgcggcattatttgtatcttgtttcgtcc 34391568  T
Q  155 atatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||| | |||||| || |||||||  ||||||||||||||| |||||    
T  34391569 ataccctgcgtcctgcggggatgacgtttaataatatttgctgatt 34391614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 40726307 - 40726202
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| || ||||||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||||||  | | ||||||||| |||    
T  40726307 agtctgttttaggtggtaatgtgttttggtgggtttatctccaggggtgtttttaggtggttatggtgtaccgtctatatgtagcatcatttgtattttg 40726208  T
Q  147 tttcgt 152  Q
    ||||||    
T  40726207 tttcgt 40726202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 43482184 - 43482330
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| ||| |||||||| | ||||||||||  | || |||||| |||||||| ||||||||||||| ||||| | || |||||||| ||     
T  43482184 agtctgttttaggtggtgttgtgtttttgtgggtttatctcaatggatgtttttaggtggttgtggtgtaccgtctgtatgcagcactatttgtatctta 43482283  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||| |||||||| |  |||||||  |||||||||||||||    
T  43482284 tttcgtccataccttgcgtc-tacggggatgacgtttaataatatttg 43482330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 101 - 200
Target Start/End: Complemental strand, 48161788 - 48161690
Alignment:
Q  101 aggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||||||||| |||||||||||||| || |||||||| ||| ||||||||||||||| ||||||  ||||||  ||||||||||||||| |||||    
T  48161788 aggtggttatggtgtgccgtctatatgcggcactatttgtattttg-ttcgtccatatcttgtgtcttgcagggatgacgtttaataatatttgctgatt 48161690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 31756384 - 31756319
Alignment:
Q  135 atttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    |||||||||||||||||||||| || |||| ||||||||||||  |||||||||||||||||||||    
T  31756384 atttgtatattgtttcgtccatttcctgcgacttgtggggatgacgtttaataatatttgttgatt 31756319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 194
Target Start/End: Complemental strand, 11378866 - 11378776
Alignment:
Q  103 gtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||||||||||||||||| ||||||||| | ||| ||||| || || |||||||| ||||||||||| |||| ||| |||||||||||||||    
T  11378866 gtggttatggtgtaccgtttatatgcggcatcatctgtatcttatt-cgtccataccttgcgtcttgcggggttggcgtttaataatatttg 11378776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 35745549 - 35745481
Alignment:
Q  132 accatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||||| |||||||||||||| ||||||| ||  || ||||  ||||||||||||||| |||||    
T  35745549 accatttgtatcttgtttcgtccataccttgcgttttacggagatgacgtttaataatatttgctgatt 35745481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 30685726 - 30685579
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||    
T  30685726 agtctgttttaggtggtgatgtgttttggtgggtttatcttcaggggtgtttttaggtggttatggtgtaccatctatatgcggcaccatttgtatcttg 30685627  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||| ||||||||||| |||||||  |||||||||||||||    
T  30685626 tttcgtccataccttgcgtcttgcggggatgacgtttaataatatttg 30685579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 31584837 - 31584695
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| ||||  |||||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||| ||||||||||| |||||||    
T  31584837 tgttttaggtggtgacatgttttggtgggtttatcttcaggggtgtttttaggtggttatggtgtatcgtctatatgcggcaccatttgtatcttgtttc 31584738  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    || |||| ||||||||||| | |||||| |||||||||||||||    
T  31584737 gt-cataccttgcgtcttgcgaggatggtgtttaataatatttg 31584695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 54 - 194
Target Start/End: Complemental strand, 24449725 - 24449586
Alignment:
Q  54 tttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtc 153  Q
    ||||||| |||||||||||||| | |||||||| |||||||||||| | |||||||||||||||||||||||||| | ||||||||||| ||||||||||    
T  24449725 tttaggtggtgatgtgttttggtgtgtttatctctaggggtgtttttatgtggttatggtgtaccgtctatatgcagcaccatttgtatcttgtttcgtc 24449626  T
Q  154 catatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||| ||||| |||||  ||||||| |||||||||||||||    
T  24449625 cataccttgcatcttg-cgggatggcgtttaataatatttg 24449586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 46814266 - 46814121
Alignment:
Q  48 gtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgt 147  Q
    |||||| |||||| ||||||||||||||  |||||||||| |||||  || |  ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  46814266 gtctgtcttaggtggtgatgtgttttggtaggtttatcttcaggggctttgtttggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgt 46814167  T
Q  148 ttcgtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    |||||||||| ||| ||||||| | |||||| ||||||||||||||    
T  46814166 ttcgtccataccttacgtcttgcgaggatggcgtttaataatattt 46814121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 5389221 - 5389084
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| ||||||||||||||  ||||||||| |||||||||||| |||||||||| |||| |||||||||||||| ||||||||||| || ||||    
T  5389221 tgttttaggtggtgatgtgttttggttggtttatctctaggggtgtttttaggtggttatagtgtgccgtctatatgcggcaccatttgtatcttatttc 5389122  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    ||||||| |||||     |||||||||| ||||||||||||||    
T  5389121 gtccataccttgc-----gtggggatggcgtttaataatattt 5389084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 5459443 - 5459557
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    ||||||| ||||||||||||||||| | ||||||||| |||||| |||| |||||||||||||||||||||||||||||| ||||||||||| ||| |||    
T  5459443 tgttttaagtagtgatgtgttttggtgagtttatcttcaggggtatttttaggtggttatggtgtaccgtctatatgcggcaccatttgtatgttgcttc 5459542  T
Q  151 gtccatatcttgcgt 165  Q
    ||||||| |||||||    
T  5459543 gtccataccttgcgt 5459557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 24684290 - 24684148
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||||||| || ||||||||||| ||||||     
T  24684290 tgttttaggtggtgatgtgttttggtgggtttatcttcaggggtgtttttaggtgattatggtgtaccgtctatatgtggcaccatttgtatcttgttt- 24684192  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    || |||| ||||| |||||  ||||||   | ||||||||||||    
T  24684191 gttcataccttgcatcttgcagggatgacatataataatatttg 24684148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 62 - 200
Target Start/End: Complemental strand, 40216293 - 40216155
Alignment:
Q  62 gtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatctt 161  Q
    ||||||||||| || ||||| ||||  ||  ||||||| ||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||||||||     
T  40216293 gtgatgtgtttcggtgggttaatctccagatgtgtttttaggtggttatgatgtaccgtctatatgcggcaccatttgtatcttgattcgtccatatctg 40216194  T
Q  162 gcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    |||||||| | |||||  ||||||||||||||| |||||    
T  40216193 gcgtcttgcgaggatgacgtttaataatatttgctgatt 40216155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 51 - 200
Target Start/End: Original strand, 41920740 - 41920889
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| ||| ||| ||||||  |||||||||| | ||||||||| ||||||||| |||||||||||||||||| | || |||||||| || ||||    
T  41920740 tgttttaggtggtggtgtattttggttggtttatcttcacgggtgtttttaggtggttacggtgtaccgtctatatgcagcacaatttgtattttatttc 41920839  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||| ||| ||||||| || ||||  |||||||||||||||| ||||    
T  41920840 gtccataccttacgtcttgcggagatgacgtttaataatatttgtcgatt 41920889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 46692618 - 46692519
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtg-ttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgttt 149  Q
    |||||||||| |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||| ||||||| ||||||| ||| ||||||    
T  46692618 tgttttaggtggtgatgtgttttggagggtttatcttcaggggtgttttttaggtggttatggtgtaccgtctttatgcggcaccatttttatcttgttt 46692519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 6804825 - 6804962
Alignment:
Q  56 taggtagtgatgtgttttggagggtttatctttaggggtgttttc-aggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtcc 154  Q
    ||||| |||||||||||||| ||| ||||| |  ||| | ||||  |||||||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  6804825 taggtggtgatgtgttttggtgggattatcctcggggtttttttttaggtggttatggtgtaccgtctatatgcggcaccatttgtatctt-tttcgtcc 6804923  T
Q  155 atatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    ||| ||||||||||| |||||| | ||||||||||||||    
T  6804924 ataccttgcgtcttgcggggatagcgtttaataatattt 6804962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 7002468 - 7002613
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    ||||| |||||||| |||||||||||||| |||||||||| ||||| | |||  | |||||||||||||||||| ||||||||| ||| ||||||| |||    
T  7002468 agtctattttaggtggtgatgtgttttggtgggtttatctctagggtttttt--aagtggttatggtgtaccgtttatatgcggcaccttttgtatcttg 7002565  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||| ||| | | ||| | |||||  |||||||||||||||    
T  7002566 tttcgtccataccttacattttgcgaggatgacgtttaataatatttg 7002613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 27031585 - 27031490
Alignment:
Q  105 ggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||| |||||||||||||||||||| | |||||  ||||||||||||||| |||||    
T  27031585 ggttatggtgtaccgtatatatgcggcaccatttatatattgttccgtccatatcttgcgtcttgcgaggatgacgtttaataatatttgatgatt 27031490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 14320658 - 14320749
Alignment:
Q  103 gtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||||||||||||||||||||||||||  ||||||||||| | |||| ||||||| ||||| |||||||||||||  |||||||||||||||    
T  14320658 gtggttatggtgtaccgtctatatgcgacaccatttgtatttggttttgtccataccttgcatcttgtggggatgacgtttaataatatttg 14320749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 24659217 - 24659313
Alignment:
Q  55 ttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcg 151  Q
    |||||| || ||||||||||| ||||||||||| |||||  || |  ||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  24659217 ttaggtggttatgtgttttggtgggtttatcttcaggggctttgtttggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcg 24659313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 4e-49; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 12898074 - 12897931
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  12898074 tgttttaggtggtgatgtgttttggtgggtttatcttcaggggtgtttttaggtggtaatggtgtaccgtctatatgcggcaccatttgtatcttgtttc 12897975  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||||| ||||| |||||||  |||||||||||||||    
T  12897974 gtccatatcttgcatcttgcggggatgacgtttaataatatttg 12897931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 20138705 - 20138851
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| ||||||||||  | ||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||    
T  20138705 agtctgttttaggtggtgatgtgttttggtgggtttatctccatgggtgtttttaggtggttatggtgtaccatctatatgcggcaccatttgtatcttg 20138804  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    |||||||||||  |||||||||| |||||||| ||||||||||||||    
T  20138805 tttcgtccatactttgcgtcttgcggggatggcgtttaataatattt 20138851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 51 - 200
Target Start/End: Original strand, 9519789 - 9519938
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| |||| ||||||||| ||||||||| | ||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  9519789 tgttttaggtggtgacgtgttttggtgggtttatcatcaggggtgtttttaggtggttatgatgtactgtctatatgcggcaccatttgtatcttgtttc 9519888  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||| ||||    
T  9519889 gtccataccttgcgtcttgtagggatggtgtttaataatatttgtcgatt 9519938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 31207164 - 31207017
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| | ||||||||| ||| ||||||| |||||||||||||||||||| ||||| ||| ||||||||||| |||    
T  31207164 agtctgttttaggtggtgatgtgttttggtgagtttatcttcaggagtgtttttaggtggttatggtgtaccgtttatatacggcaccatttgtatcttg 31207065  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||| ||||||||||| | |||||| |||||||||||||||    
T  31207064 tttcgtccataccttgcgtcttgcgaggatggcgtttaataatatttg 31207017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 32066082 - 32065940
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  32066082 tgttttaggtggtgatgtgttttggtgggtttatcttcaggggtgtttttaggtggttatg-tgtaccgtctatatgcggcaccatttgtatcttgtttc 32065984  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||| ||||| ||||| || ||||| |||||||||||||||    
T  32065983 gtccataccttgcatcttgcggtgatggcgtttaataatatttg 32065940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 51 - 194
Target Start/End: Original strand, 22773904 - 22774047
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| ||||| |||||||| ||||||||||| |  |||||||| || ||||||||||||||||||||||||||| ||||||||||| | |||||    
T  22773904 tgttttaggtggtgatatgttttggtgggtttatcttcactggtgtttttagatggttatggtgtaccgtctatatgcggcaccatttgtatctagtttc 22774003  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||| ||||||||||| |||||||| |||||||||||||||    
T  22774004 gtccataccttgcgtcttgcggggatggcgtttaataatatttg 22774047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 36631102 - 36631247
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| |||    
T  36631102 agtctgttttaggtggtgatgtgttttggtgggtttatcttcaggggtgtttttaggtgattatggtgtaccgtctatatgcggcaccatttgtatcttg 36631201  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    |||| | |||| |||||||||||  ||||||| || |||||||||||    
T  36631202 tttc-ttcataccttgcgtcttgcagggatggcgtataataatattt 36631247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 51 - 200
Target Start/End: Complemental strand, 24995193 - 24995044
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| ||||  |||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||| ||||||||||| |||||||    
T  24995193 tgttttaggtggtgacatgttttggtgggtttatcttcaggggtgtttttaggtggttatggtgtactgtctataagcggcaccatttgtatcttgtttc 24995094  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||| ||||||||||  |||||||| ||| ||||||||||| |||||    
T  24995093 gtccataccttgcgtcttacggggatggcgttcaataatatttgctgatt 24995044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 27889125 - 27889249
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| ||||||||||  ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| |||    
T  27889125 agtctgttttaggtggtgatgtgttttggtgggtttatctccaggggtgtttttaggtggttatggtgtacagtctatatgcggcaccatttgtatcttg 27889224  T
Q  147 tttcgtccatatcttgcgtcttgtg 171  Q
    ||||||| ||| |||||||||||||    
T  27889225 tttcgtcaataccttgcgtcttgtg 27889249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 27947783 - 27947907
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| ||||||||||  ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||| |||    
T  27947783 agtctgttttaggtggtgatgtgttttggtgggtttatctccaggggtgtttttaggtggttatggtgtacagtctatatgcggcaccatttgtatcttg 27947882  T
Q  147 tttcgtccatatcttgcgtcttgtg 171  Q
    ||||||| ||| |||||||||||||    
T  27947883 tttcgtcaataccttgcgtcttgtg 27947907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 37986653 - 37986510
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| ||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||| |||||||    
T  37986653 tgttttaggtggtgatgtgttttaatgggtttatctttaggggtgtttttaggtggttatggtgtaccgtctatatgcagcaccatttgtatcttgtttc 37986554  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||| |  ||||||||||| |||||||   ||||||||||||||    
T  37986553 gtccgtgccttgcgtcttgcggggatgacatttaataatatttg 37986510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 3584031 - 3584170
Alignment:
Q  62 gtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtat-attgtttcgtccatatct 160  Q
    ||||||||| |||| ||||||||||| |||||  || |  ||||||||||||||||||||||||||||| |||||||||||  ||||||||| |||| ||    
T  3584031 gtgatgtgtgttggtgggtttatcttaaggggctttgtttggtggttatggtgtaccgtctatatgcggcaccatttgtatctttgtttcgttcatacct 3584130  T
Q  161 tgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
     ||||||||||||||||| ||||||||||||||| |||||    
T  3584131 cgcgtcttgtggggatggcgtttaataatatttgctgatt 3584170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 107 - 200
Target Start/End: Original strand, 13538324 - 13538417
Alignment:
Q  107 ttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||| |||||    
T  13538324 ttatgatgtaccgtctatatgcggtaccatttgtatattctttcgtccataccttgcgtcttgtggagatggcgtttaataatatttgctgatt 13538417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 13686150 - 13686057
Alignment:
Q  107 ttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||||||| |||||    
T  13686150 ttatgatgtaccgtctatatgcggtaccatttgtatattctttcgtccataccttgcgtcttgtggagatggcgtttaataatatttgctgatt 13686057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 48 - 200
Target Start/End: Complemental strand, 15821177 - 15821026
Alignment:
Q  48 gtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgt 147  Q
    |||||| |||||| |||||||||||||| || |||||||| |||||| || |  |||||||||||| |||||||||||||||| ||||||||||| ||||    
T  15821177 gtctgtcttaggtggtgatgtgttttggtggttttatcttcaggggttttatttggtggttatggtataccgtctatatgcggcaccatttgtatcttgt 15821078  T
Q  148 ttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    | |||||||| |||||||||||   |||||  ||||||||||||||| |||||    
T  15821077 tccgtccataccttgcgtcttg-caggatgacgtttaataatatttgctgatt 15821026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 194
Target Start/End: Complemental strand, 35816045 - 35815899
Alignment:
Q  48 gtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgt 147  Q
    |||||| ||| || |||||| ||||||| ||||||||||| | |||  || |  || ||||||||||||||||||||||| || ||||||||||| ||||    
T  35816045 gtctgtcttaagtggtgatgggttttggtgggtttatcttcatgggctttgtttgggggttatggtgtaccgtctatatgtggcaccatttgtatcttgt 35815946  T
Q  148 ttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||||||||| ||||||| ||| | |||||| |||||||||||||||    
T  35815945 ttcgtccataccttgcgttttgcgaggatggcgtttaataatatttg 35815899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 53 - 194
Target Start/End: Complemental strand, 16457270 - 16457130
Alignment:
Q  53 ttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgt 152  Q
    |||||||| |||||||||||||| | | ||||| | | || | |||| ||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  16457270 ttttaggtggtgatgtgttttggtgcgattatcctcaaggat-tttttaggtggttatggtgtaccgtctatatgtggcaccatttgtatcttgtttcgt 16457172  T
Q  153 ccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||| ||| |||||||  ||||||  |||||||||||||||    
T  16457171 ccataccttacgtcttgcagggatgacgtttaataatatttg 16457130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 34388805 - 34388714
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtat 142  Q
    |||||||||| |||||||||||||  ||||||||||| | ||||||||| |||||||||||||||||||||||||||| | || ||||||||    
T  34388805 tgttttaggtggtgatgtgttttgctgggtttatcttcacgggtgtttttaggtggttatggtgtaccgtctatatgcagcactatttgtat 34388714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 35821535 - 35821680
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||  ||||| | | ||||| | || ||| |||| || ||||||||||||||||||||||||||| | |||||||||  ||    
T  35821535 agtctgttttaggtggtgatgtagtttggtgagattatcctcagaggttttttaag-tggttatggtgtaccgtctatatgcggcatcatttgtatcatg 35821633  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||  ||||||||||| || ||||| |||||||||||||||    
T  35821634 tttcgtccat-ccttgcgtcttgcggagatggcgtttaataatatttg 35821680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 41893206 - 41893052
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    ||||||||||||||||||||||||||||| || |||||| |  ||| | |||| |||||||||||||||||||||||||||||  ||||||||||| ||     
T  41893206 agtctgttttaggtagtgatgtgttttggtggatttatcctc-gggttttttttaggtggttatggtgtaccgtctatatgcgacaccatttgtat-ttt 41893109  T
Q  147 tttcgtccatatcttg---cgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    |||||| |||| ||||   | |||| |||||| |  |||||||||||||||| ||||    
T  41893108 tttcgttcataccttgtgacatcttatggggacgacgtttaataatatttgtcgatt 41893052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 55 - 200
Target Start/End: Complemental strand, 38577580 - 38577435
Alignment:
Q  55 ttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtcc 154  Q
    |||||| |||||||||||||| ||||||||||| | |  | || |  ||| |||||  |||||||||||||||||| | ||||||||||||||||||| |    
T  38577580 ttaggtggtgatgtgttttggtgggtttatcttcatgtattttgtttggtagttattttgtaccgtctatatgcggcatcatttgtatattgtttcgttc 38577481  T
Q  155 atatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    |||  || | ||||| ||  |||  |||||||||||||||||||||    
T  38577480 atacattacatcttgcggaaatgacgtttaataatatttgttgatt 38577435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 9659478 - 9659528
Alignment:
Q  144 ttgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||||||||||||| ||||||||||| |||||||  |||||||||||||||    
T  9659478 ttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttg 9659528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 10837984 - 10837918
Alignment:
Q  102 ggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtctt 168  Q
    ||||||||||||||||||||||||||||| || ||||| || || ||| || |||  ||||||||||    
T  10837984 ggtggttatggtgtaccgtctatatgcggcacgatttgcatcttattttgttcattccttgcgtctt 10837918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 4e-46; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 2392305 - 2392159
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    ||||| |||||||  |||||||||||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||    
T  2392305 agtctattttaggcggtgatgtgttttggtgggtttattttcaggggtgtttttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttg 2392206  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    ||||||||||| ||||||||||| |||||||  ||||||||||||||    
T  2392205 tttcgtccataccttgcgtcttgcggggatgacgtttaataatattt 2392159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 2394068 - 2393922
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    ||||| |||||||  |||||||||||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||    
T  2394068 agtctattttaggcggtgatgtgttttggtgggtttattttcaggggtgtttttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttg 2393969  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    ||||||||||| ||||||||||| |||||||  ||||||||||||||    
T  2393968 tttcgtccataccttgcgtcttgcggggatgacgtttaataatattt 2393922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 46 - 200
Target Start/End: Original strand, 47235976 - 47236130
Alignment:
Q  46 aagtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatatt 145  Q
    ||||||||||||||| ||||||| |||||| ||||||||||  ||||||||||| || |||||||||| |||||||||||||||| ||||||||||| ||    
T  47235976 aagtctgttttaggtggtgatgtattttggtgggtttatctccaggggtgtttttagatggttatggtataccgtctatatgcggcaccatttgtatctt 47236075  T
Q  146 gtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    |||||||||||| |||||||||||  ||||||| ||||||||||||||| |||||    
T  47236076 gtttcgtccataccttgcgtcttgcagggatggcgtttaataatatttgctgatt 47236130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 51 - 194
Target Start/End: Original strand, 31483163 - 31483306
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||  |||||||||||||| | ||||||||  ||||||||||| |||||||||||||||||||||||||||| | ||||||||||| ||||||     
T  31483163 tgttttaggcggtgatgtgttttggtgagtttatctccaggggtgtttttaggtggttatggtgtaccgtctatatgcagcaccatttgtatcttgtttt 31483262  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    || |||| |||||||||||||||||||| |||||||||||||||    
T  31483263 gttcataccttgcgtcttgtggggatggtgtttaataatatttg 31483306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 45164133 - 45164279
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    ||||| |||||||| |||||||||||||| ||||||||||  |||| |||||| |||||||||||||||||||||||||||||| ||||||||||| |||    
T  45164133 agtctattttaggtggtgatgtgttttggtgggtttatctccaggg-tgtttttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttg 45164231  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||| ||||||| ||||| ||||| ||||||   |||||||||||||||    
T  45164232 tttagtccataccttgcatcttgcggggataatgtttaataatatttg 45164279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 47 - 191
Target Start/End: Complemental strand, 34475560 - 34475416
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| | ||||||||  ||||||||| | ||||||||||||| ||||||||||||| || ||||||||||| |||    
T  34475560 agtctgttttaggtggtgatgtgttttggtgagtttatctccaggggtgttcttaggtggttatggtataccgtctatatggggcaccatttgtatcttg 34475461  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatat 191  Q
    |||||| |||| | ||||||||| |||||||  ||||||||||||    
T  34475460 tttcgttcataccctgcgtcttgcggggatgacgtttaataatat 34475416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 48 - 200
Target Start/End: Complemental strand, 40023370 - 40023218
Alignment:
Q  48 gtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgt 147  Q
    |||||| |||||| |||||||||||||  ||||||||||| |||||  || |  ||||||||||||||||||||||||||||| | ||||||||| ||||    
T  40023370 gtctgtcttaggtggtgatgtgttttgatgggtttatcttcaggggctttgtttggtggttatggtgtaccgtctatatgcggcatcatttgtatcttgt 40023271  T
Q  148 ttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||||   ||||||||| |||||||  |||||||||||||||||||||    
T  40023270 ttcgtccatacaatgcgtcttgcggggatgatgtttaataatatttgttgatt 40023218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 19176785 - 19176932
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| || ||||||||||| |||||| |||| |||||| |||| |||| ||||||||||||||||||||||||| |||||||||||  ||    
T  19176785 agtctgttttaggtggttatgtgttttggtgggtttgtcttcaggggtatttttaggtcgttatggtgtaccgtctatatgcggcaccatttgtatcatg 19176884  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||||||||||  ||||||||||  || |||  |||||||||||||||    
T  19176885 tttcgtccatactttgcgtcttgcaggaatgacgtttaataatatttg 19176932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 62 - 169
Target Start/End: Complemental strand, 30352226 - 30352119
Alignment:
Q  62 gtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatctt 161  Q
    |||||||||||||| ||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||    
T  30352226 gtgatgtgttttggtgggcttatcttcaggggtgtttttaggtggttatggtgtaccttctatatgcggcaccatttgtatcttgtttcgtccatacctt 30352127  T
Q  162 gcgtcttg 169  Q
    ||||||||    
T  30352126 gcgtcttg 30352119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 43012656 - 43012778
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||| | ||||||| |||||| |||||| |||| ||| ||||||| |||||||||||||||| ||||||||||||| |||||||||||||||    
T  43012656 agtctgttttagatggtgatgtcttttggtgggtttttcttcaggagtgtttttaggtggttatggtgtatcgtctatatgcggcaccatttgtatattg 43012755  T
Q  147 tttcgtccatatcttgcgtcttg 169  Q
    |||||| |||| |||||||||||    
T  43012756 tttcgttcataccttgcgtcttg 43012778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 9583840 - 9583710
Alignment:
Q  62 gtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatctt 161  Q
    |||||||||||||| |||||||| || | |||| |||| |||||||||||||||| ||||||||||||| ||||||||||| |||||||||| ||| |||    
T  9583840 gtgatgtgttttggtgggtttattttcaagggtatttttaggtggttatggtgtatcgtctatatgcggcaccatttgtatcttgtttcgtctatacctt 9583741  T
Q  162 gcgtcttgtggggatggagtttaataatatt 192  Q
    | |||||  || ||||| |||||||||||||    
T  9583740 gtgtcttacggagatggcgtttaataatatt 9583710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 17551236 - 17551382
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    ||||| |||||||| |||||||||||||| |||||| | || || |||||||| ||||||||||||||||| |||||||||||| ||||||||||| |||    
T  17551236 agtctcttttaggtggtgatgtgttttggtgggttttttttcagaggtgtttttaggtggttatggtgtacagtctatatgcggcaccatttgtattttg 17551335  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    |||||| |||| | ||| |||||  |||||   ||||||||||||||    
T  17551336 tttcgttcataccctgcatcttgcagggataacgtttaataatattt 17551382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 67 - 200
Target Start/End: Complemental strand, 50305356 - 50305223
Alignment:
Q  67 gtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtc 166  Q
    ||||||||| ||||||||||| |||||  || |  | ||||||||||||||||||||||||||  ||||||||||| ||||| |||||||| ||||||||    
T  50305356 gtgttttggtgggtttatcttcaggggctttatttgatggttatggtgtaccgtctatatgcgacaccatttgtatcttgttccgtccataccttgcgtc 50305257  T
Q  167 ttgtggggatggagtttaataatatttgttgatt 200  Q
    ||| ||| |||| ||||||||||||||| |||||    
T  50305256 ttgcgggaatggcgtttaataatatttgctgatt 50305223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 53248179 - 53248332
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||| | ||| ||||||| |||| |||||| || ||||||||||||||   |||||||||  ||||||||||| |||    
T  53248179 agtctgttttaggtggtgatgtgtttttgtggggttatcttcagggttgtttttagatggttatggtgtacaacctatatgcgacaccatttgtatcttg 53248278  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||| ||||||| ||| || |||| |||||||  |||||||||||||||| ||||    
T  53248279 ttttgtccataccttacgccttgcggggatgacgtttaataatatttgtcgatt 53248332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 55 - 200
Target Start/End: Original strand, 21343635 - 21343779
Alignment:
Q  55 ttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtcc 154  Q
    |||||| |||||||||||||| ||||| ||||| | |||   | | ||||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  21343635 ttaggtggtgatgtgttttggtgggtt-atcttcacgggccatgttaggtggttatgatgtaccgtctatatgcggcaccatttgtatcttgtttcgtcc 21343733  T
Q  155 atatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||| |||| ||||||  ||||||  |||||||||||||||| ||||    
T  21343734 ataccttgtgtcttgccgggatgacgtttaataatatttgtcgatt 21343779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 103 - 194
Target Start/End: Complemental strand, 4463831 - 4463740
Alignment:
Q  103 gtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||||||||||| ||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||||||| ||  |||||||||||||||    
T  4463831 gtggttatggtgcaccgtctatatgcggcaccatttgtgtgttgtttcgtccatgtcttgcgtcttgtggggttgacgtttaataatatttg 4463740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 25506814 - 25506719
Alignment:
Q  105 ggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||  |||||||| |||||| |||||||  |||||||||||||||| ||||    
T  25506814 ggttatggtgtaccgtctatatgcggcaccatttgtatattgttttgtttatatcttgggtcttgcggggatgatgtttaataatatttgtcgatt 25506719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 23328095 - 23327997
Alignment:
Q  102 ggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||||||||||||| ||||||||| ||||||| ||| |||||||||||||| ||||||| |||  ||||| | ||||||||||||||| |||||    
T  23328095 ggtggttatggtgtaccgtatatatgcggcaccatttatatcttgtttcgtccataccttgcgtattgcagggatagcgtttaataatatttgctgatt 23327997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 50559978 - 50560076
Alignment:
Q  102 ggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||||||| ||||||||| ||||| | | ||||||| |||||||||||||||||||||| ||| | |||||  |||||||||||||||||||||    
T  50559978 ggtggttatggtgcaccgtctatgtgcggcatcttttgtatcttgtttcgtccatatcttgcgtattgcgaggatgacgtttaataatatttgttgatt 50560076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 45399119 - 45399217
Alignment:
Q  102 ggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||||||||||||||||||||||| ||| ||||||| ||||||||| |||| || |||||||  || ||||  ||||||||||||||| |||||    
T  45399119 ggtggttatggtgtaccgtctatatgcggcaccgtttgtatcttgtttcgttcatacctcgcgtctttcggagatgtcgtttaataatatttgctgatt 45399217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 37158618 - 37158731
Alignment:
Q  82 tatctttaggggtgttttcaggtggttatggtgt-accgtct-atatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatgga 179  Q
    |||||| ||||||||||| |||||||||| |||| ||| | | |||||||| |||||||||||  ||||||||||||| ||||||||||| ||||||||     
T  37158618 tatcttcaggggtgtttttaggtggttatagtgttaccatattatatgcggcaccatttgtatcctgtttcgtccataccttgcgtcttgcggggatggc 37158717  T
Q  180 gtttaataatatttg 194  Q
    |||| ||||||||||    
T  37158718 gttt-ataatatttg 37158731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 39021046 - 39020991
Alignment:
Q  144 ttgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    |||||| ||||||||||| |||||||  ||||||  |||||||||||||||||||||    
T  39021046 ttgtttggtccatatcttacgtcttgcagggatgc-gtttaataatatttgttgatt 39020991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 5e-45; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 27555729 - 27555585
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| || |||||||| |||||||    
T  27555729 tgttttaggtggtgatgtgttttggtgggtttatcttcaggggtgtttttaggtggttatggtgtaccatctatatgcggcacaatttgtatcttgtttc 27555630  T
Q  151 gtccatatcttgcgtcttg-tggggatggagtttaataatatttg 194  Q
    ||||||| |||||||||||  |||||||| |||||||||||||||    
T  27555629 gtccataccttgcgtcttgcgggggatggcgtttaataatatttg 27555585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 47 - 200
Target Start/End: Original strand, 30964716 - 30964869
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| ||||||||||  ||| ||||||| ||||||||||||||||||||||||||||   | ||||||||| |||    
T  30964716 agtctgttttaggtggtgatgtgttttggtgggtttatctccaggagtgtttttaggtggttatggtgtaccgtctatatgcaacatcatttgtatcttg 30964815  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||||| |||||||||||  ||||||| |||||||||||||||| ||||    
T  30964816 tttcgtccataccttgcgtcttgcagggatggtgtttaataatatttgtcgatt 30964869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 63 - 194
Target Start/End: Original strand, 35329302 - 35329433
Alignment:
Q  63 tgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttg 162  Q
    ||||||||||||| ||||||||||| | |||| |||| |||||||||||||||||||||||||||| | ||||||||||| |||||||||||||| |||     
T  35329302 tgatgtgttttggtgggtttatcttcatgggtatttttaggtggttatggtgtaccgtctatatgcagcaccatttgtatcttgtttcgtccatacctta 35329401  T
Q  163 cgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||| |||||||| ||||| |||||||||    
T  35329402 cgtcttgcggggatggcgtttactaatatttg 35329433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 51 - 200
Target Start/End: Complemental strand, 36689603 - 36689454
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||| | |||||||||||||| | ||||||||| ||||||||||| | |||||||| |||||||||||||||||| |||||||||||| || ||||    
T  36689603 tgttttagatggtgatgtgttttggtgagtttatcttcaggggtgtttttaagtggttatagtgtaccgtctatatgcgataccatttgtatcttatttc 36689504  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||| || |||||||| || |||||  ||||||||||||||| ||||    
T  36689503 gtccatacctcgcgtcttgcggagatggtatttaataatatttgtcgatt 36689454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 46 - 177
Target Start/End: Original strand, 20464867 - 20464998
Alignment:
Q  46 aagtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatatt 145  Q
    |||| |||||||||| ||||||| | |||| ||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||| ||    
T  20464867 aagtttgttttaggtggtgatgtatgttggtgggtttatcttcaggggtgtttttaggtggttatggtgtaccgtctatatacggcaccatttgtatctt 20464966  T
Q  146 gtttcgtccatatcttgcgtcttgtggggatg 177  Q
    ||||| | |||| ||||| ||||||| |||||    
T  20464967 gtttctttcataccttgcatcttgtgaggatg 20464998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 8255306 - 8255453
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||| | | ||||||||| ||| ||||||| ||||||||||| |||||||||||||||||| | ||||||||| |||    
T  8255306 agtctgttttaggtggtgatgtgtttttgtgagtttatcttcaggagtgtttttaggtggttatgatgtaccgtctatatgcggcatcatttgtatcttg 8255405  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    | ||||||| | |||   ||||| || ||| | |||||||||||||||    
T  8255406 tctcgtccacaccttatatcttgcggagatagcgtttaataatatttg 8255453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 8268724 - 8268871
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||| | | ||||||||| ||| ||||||| ||||||||||| |||||||||||||||||| | ||||||||| |||    
T  8268724 agtctgttttaggtggtgatgtgtttttgtgagtttatcttcaggagtgtttttaggtggttatgatgtaccgtctatatgcggcatcatttgtatcttg 8268823  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    | ||||||| | |||   ||||| || ||| | |||||||||||||||    
T  8268824 tctcgtccacaccttatatcttgcggagatagcgtttaataatatttg 8268871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 63 - 194
Target Start/End: Complemental strand, 11281511 - 11281380
Alignment:
Q  63 tgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttg 162  Q
    ||||||||||| | ||| ||||||| || |||||||| ||||||||||||| |||||||||||| | | ||||||| |||  ||||||||||||||||||    
T  11281511 tgatgtgttttagtggggttatcttcagaggtgtttttaggtggttatggtataccgtctatatacagcaccatttatatcatgtttcgtccatatcttg 11281412  T
Q  163 cgtcttgtggggatggagtttaataatatttg 194  Q
    |||||||||| ||||  ||| |||||||||||    
T  11281411 cgtcttgtggagatgacgttcaataatatttg 11281380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 47 - 200
Target Start/End: Complemental strand, 30167367 - 30167212
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctata--tgcggtaccatttgtatat 144  Q
    |||||||||||||  |||||||||||||| ||||||||||| || ||| |||| || ||||||| ||||||||||||||  |   | | ||||||||| |    
T  30167367 agtctgttttaggatgtgatgtgttttggtgggtttatcttcagtggtatttttagatggttatagtgtaccgtctatattttttgcatcatttgtatct 30167268  T
Q  145 tgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||||||| ||||||||||| | |||||  |||||||||||||||| ||||    
T  30167267 tgtttcgtccataccttgcgtcttgcgaggatgacgtttaataatatttgtcgatt 30167212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 57 - 200
Target Start/End: Complemental strand, 35341143 - 35341000
Alignment:
Q  57 aggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccat 156  Q
    |||| |||||||||| ||| ||  ||||||| |||||  || || || ||||||||||||||||||||||| || ||||||||||| |||||||||||||    
T  35341143 aggtggtgatgtgttatggggg--ttatcttcaggggctttgtccgggggttatggtgtaccgtctatatgtggcaccatttgtatcttgtttcgtccat 35341046  T
Q  157 atcttgcgtctt--gtggggatggagtttaataatatttgttgatt 200  Q
    |  |||||||||  | |||||||  |||||||||||||||||||||    
T  35341045 acattgcgtcttgcggggggatgacgtttaataatatttgttgatt 35341000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 8705938 - 8705795
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    ||||| |||||||| |||||||||||| | ||    ||||| | ||||||||| |||||||||||||||||||||||||||| | |||||||||||  ||    
T  8705938 agtctattttaggtggtgatgtgtttttgtgg----atcttcaagggtgtttttaggtggttatggtgtaccgtctatatgcagcaccatttgtatcctg 8705843  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
      ||||||||| || ||||||||  ||||||  |||||||||||||||    
T  8705842 cctcgtccatacctcgcgtcttgaagggatgacgtttaataatatttg 8705795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 101 - 194
Target Start/End: Original strand, 7703020 - 7703112
Alignment:
Q  101 aggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||||||||||||||||||||||||||||| ||||||||||| || |||| |||||| |||| |||||| |||||||  |||||||||||||||    
T  7703020 aggtggttatggtgtaccgtctatatgcggcaccatttgtatctt-tttcatccataccttgtgtcttgcggggatgacgtttaataatatttg 7703112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 46698525 - 46698428
Alignment:
Q  103 gtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||    |||||  ||||||||||||||| |||||    
T  46698525 gtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgaccataccttgcgtctttcatggatgacgtttaataatatttgctgatt 46698428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 105 - 200
Target Start/End: Original strand, 2826118 - 2826213
Alignment:
Q  105 ggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||| |||||||| |||||||||||  | ||||  ||||||||||||||| |||||    
T  2826118 ggttatggtgtaccgtatatatgcggcaccatttgtatcttgttccgtccataccttgcgtcttgcagagatgacgtttaataatatttgctgatt 2826213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 55 - 194
Target Start/End: Original strand, 4305994 - 4306130
Alignment:
Q  55 ttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtcc 154  Q
    |||||| |||||||||||||| ||| ||||| |   || | |||| |||||||||||||||||||||||||||||| ||||||| ||| || |||||| |    
T  4305994 ttaggtggtgatgtgttttggtgggattatcctc--ggatttttttaggtggttatggtgtaccgtctatatgcggcaccatttatatctt-tttcgttc 4306090  T
Q  155 atatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||| ||||||||||  |||||||   ||||||||||||||    
T  4306091 ataccttgcgtcttccggggatgacatttaataatatttg 4306130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 49528421 - 49528512
Alignment:
Q  103 gtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||  || ||| |||| ||| ||||||| |||||||    
T  49528421 gtggttttggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccataccttatgttttgcggggttggtgtttaatgatatttg 49528512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 194
Target Start/End: Complemental strand, 31050408 - 31050316
Alignment:
Q  102 ggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||||||||||||||||||||  | ||||||||| ||||||||||||||  | || ||||| ||||| |  |||||||||||||||    
T  31050408 ggtggttatggtgtaccgtctatatgcgacatcatttgtatcttgtttcgtccatacatcgcatcttgcggggacgacgtttaataatatttg 31050316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 9750116 - 9750198
Alignment:
Q  117 ccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    |||||||||||||| ||||||||||| |||||||||||| | | ||||||||| |||||||  |||||||||||||||| ||||    
T  9750116 ccgtctatatgcggcaccatttgtatcttgtttcgtcca-aacctgcgtcttgcggggatgacgtttaataatatttgtcgatt 9750198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 52868859 - 52868760
Alignment:
Q  102 ggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggag-tttaataatatttgttgatt 200  Q
    |||||||||||||||||||||||| |||  ||||||||||| ||  ||||| |||| ||| |||||||||  ||||  | |||||||||||||| |||||    
T  52868859 ggtggttatggtgtaccgtctatacgcgacaccatttgtatcttaattcgttcataccttacgtcttgtgaagatgacgttttaataatatttgatgatt 52868760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 7161816 - 7161669
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    ||||||||||||||||||||||||||||| |||||||| || ||||||||||| ||||| ||||||||||||||||||||||   || |||||||| ||     
T  7161816 agtctgttttaggtagtgatgtgttttggtgggtttatattcaggggtgtttttaggtgattatggtgtaccgtctatatgctacactatttgtatctta 7161717  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||||||||||||||||||||| |  |||||||||||||||    
T  7161716 tttcgtccatatcttgcgtcttgtggggaagacgtttaataatatttg 7161669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 55 - 194
Target Start/End: Original strand, 18593529 - 18593668
Alignment:
Q  55 ttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtcc 154  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||| | ||| |||||||||||    
T  18593529 ttaggtggtgatgtgttttggcgggtttatcttcaggggtgtttttaggtggttatggtgtaccgtctatatgcggcaccatatttatcttgtttcgtcc 18593628  T
Q  155 atatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||| ||||| ||||| |||||||  |||||||||||||||    
T  18593629 ataccttgcatcttgcggggatgacgtttaataatatttg 18593668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 51 - 200
Target Start/End: Original strand, 34378382 - 34378531
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| |||||||||||| | ||||||||||| ||||||||||| || ||||||||||||||||||||||||||| ||||||||||| | || ||    
T  34378382 tgttttaggtggtgatgtgtttttgtgggtttatcttcaggggtgtttttagatggttatggtgtaccgtctatatgcggcaccatttgtatctcgtctc 34378481  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||  ||||||||||| || ||||| |||||||||||||||| ||||    
T  34378482 gtccatgccttgcgtcttgcggagatggcgtttaataatatttgtcgatt 34378531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 47 - 163
Target Start/End: Original strand, 29087757 - 29087873
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    ||||||||||||||  ||||||||||||| ||||||||||| |||| |||||| ||||||||||| |||||||||||||||||| ||||||||||| |||    
T  29087757 agtctgttttaggtgctgatgtgttttggtgggtttatcttcagggttgtttttaggtggttatgatgtaccgtctatatgcggcaccatttgtatcttg 29087856  T
Q  147 tttcgtccatatcttgc 163  Q
    ||||||||||| |||||    
T  29087857 tttcgtccataccttgc 29087873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 5656895 - 5656749
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||| ||||||||| |||  ||||||||| || |||||||| ||| ||||||| ||||||||||  |||||||||||||||||| | ||||||||| ||     
T  5656895 agtcagttttaggtggtggcgtgttttggtggatttatcttaaggtgtgtttttaggtggttatcatgtaccgtctatatgcggcatcatttgtatctta 5656796  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    |||||| |||| ||||||||||| || ||||| ||||||||||||||    
T  5656795 tttcgttcataccttgcgtcttgcggtgatggcgtttaataatattt 5656749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 698661 - 698799
Alignment:
Q  62 gtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatctt 161  Q
    |||||||| |||||  |||||||||| | ||||||||| |||||||||| ||||||||||||||||||| |||||||||||  | |||| |||||| |||    
T  698661 gtgatgtggtttggtaggtttatcttcaagggtgtttttaggtggttatagtgtaccgtctatatgcggcaccatttgtatcatatttcatccatacctt 698760  T
Q  162 gcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
     |||||||  | ||||  ||||||||||||||| |||||    
T  698761 acgtcttgcagagatgtcgtttaataatatttgctgatt 698799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 7452913 - 7453014
Alignment:
Q  93 gtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatt 192  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||| || ||||||| |||||||||||   |||||  |||||||||||||    
T  7452913 gtgtttttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttgatttgtccataccttgcgtcttgcatggatgatgtttaataatatt 7453012  T
Q  193 tg 194  Q
    ||    
T  7453013 tg 7453014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 18313446 - 18313310
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| ||||||||||    |||||||||          ||||||||||||||||||||| |||||||| || |||    
T  18313446 agtctgttttaggtggtgatgtgttttggtgggtttatctccgagggtgtttt----------tggtgtaccgtctatatgcggcaccatttgcatcttg 18313357  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    |||| |||||| ||||||||||   || |||  ||||||||||||||    
T  18313356 tttcatccataccttgcgtcttacaggaatgacgtttaataatattt 18313310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 41250939 - 41250893
Alignment:
Q  103 gtggttatggtgtaccgtctatatgcggtaccatttgtatattgttt 149  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  41250939 gtggttatggtgtaccgtctatatgcggcaccatttatatcttgttt 41250893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 194
Target Start/End: Complemental strand, 18255192 - 18255105
Alignment:
Q  107 ttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||| |||||||||||||||||| || |||||||| |||||||||| ||| | ||| ||||  ||||||   |||||| ||||||||    
T  18255192 ttatgatgtaccgtctatatgcggcactatttgtatcttgtttcgtctataccctgcatcttacggggataacgtttaacaatatttg 18255105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 2471 - 2345
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| |||||||| ||||| ||||||||||| | ||||||||| |||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  2471 tgttttaggtggtgatgtggtttggtgggtttatcttcaagggtgtttttaggtggttatggtgtaccgtctatatgcggcaccatctgtatcttgtttc 2372  T
Q  151 gtccatatcttgcgtcttgtggggatg 177  Q
    ||||||| |||||||||||||||||||    
T  2371 gtccataccttgcgtcttgtggggatg 2345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 48614 - 48761
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    ||||||||||||||  |||||||||||||  || ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||    
T  48614 agtctgttttaggtgatgatgtgttttggtaggattatctttaagggtgtttttaggtggttatggtgtaccgtctatatgcggcaccatttgtatcttg 48713  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||| |||||||||||| |||||| ||||| |  ||| |||||||||||    
T  48714 tttagtccatatcttgtgtcttgcggggaggacgttgaataatatttg 48761  T

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Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 3254236 - 3254383
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| ||||||| |||||| |||||||| || ||||||||||| |||||| ||||||||||  ||||||| ||| ||||||||||| |||    
T  3254236 agtctgttttaggtggtgatgtattttggtgggtttattttcaggggtgtttttaggtggctatggtgtactatctatatacggcaccatttgtatcttg 3254335  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||||||| ||||||||||| |||||||  |||||||||||||||    
T  3254336 tttcgtccataccttgcgtcttgcggggatgacgtttaataatatttg 3254383  T

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Target: chr6; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 15944278 - 15944425
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattg 146  Q
    |||||||||||||| |||||||||||||| |||||||| || |||||| |||| ||||| |||||||||||||||||||||||  ||||||||||| ||     
T  15944278 agtctgttttaggtggtgatgtgttttggtgggtttatattcaggggtatttttaggtgtttatggtgtaccgtctatatgcgacaccatttgtatcttc 15944377  T
Q  147 tttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||  ||||||| ||||||||||   ||||||| |||||||||||||||    
T  15944378 ttctgtccataccttgcgtcttacagggatggcgtttaataatatttg 15944425  T

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Target: chr6; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 51 - 194
Target Start/End: Original strand, 3117777 - 3117920
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| |||||||| |||||  ||||||||||| | |||||||| |||||||||||||||| ||||||||||| | ||||||||||| || ||||    
T  3117777 tgttttaggtggtgatgtggtttggtaggtttatctttggaggtgtttttaggtggttatggtgtagcgtctatatgctgcaccatttgtatcttatttc 3117876  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    ||||||| ||| |||||||  || |||  |||||||||||||||    
T  3117877 gtccataccttacgtcttgcaggaatgacgtttaataatatttg 3117920  T

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Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 10542114 - 10542255
Alignment:
Q  51 tgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttc 150  Q
    |||||||||| ||| |||  ||||  ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||| ||| ||||||| |||||||    
T  10542114 tgttttaggtggtggtgtaatttgatgggtttatcttcaggggtgtttttaggtggttatggtgtatcgtctatatgcggcaccttttgtatcttgtttc 10542213  T
Q  151 gtccatatcttgcgtcttgtggggatggagtttaataatattt 193  Q
    || |||||||||| |||||  ||||||| | ||||||||||||    
T  10542214 gttcatatcttgcatcttg-cgggatggcgcttaataatattt 10542255  T

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Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 33697843 - 33697788
Alignment:
Q  103 gtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcgtccatat 158  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  33697843 gtggttatggtgtaccgtctatatgcggcaccatttgtatcttgtttcgtccatat 33697788  T

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Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 15132573 - 15132489
Alignment:
Q  116 accgtctatatgcggtaccatttgtatattgtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttgttgatt 200  Q
    ||||||||||| ||| | ||||||||| |||||| ||||||| ||| ||||||| |  ||||| ||||||||||||||| |||||    
T  15132573 accgtctatatacggcatcatttgtatcttgttttgtccataccttacgtcttgcgatgatggcgtttaataatatttgctgatt 15132489  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 14663359 - 14663411
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgtttt 99  Q
    |||||||||||||| |||||||||||| | ||||||||||  |||||||||||    
T  14663359 agtctgttttaggtggtgatgtgttttcgtgggtttatctccaggggtgtttt 14663411  T

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Target: scaffold0343 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 53 - 194
Target Start/End: Original strand, 5989 - 6131
Alignment:
Q  53 ttttaggtagtgatgtgttttggaggg-tttatctttaggggtgttttcaggtggttatggtgtaccgtctatatgcggtaccatttgtatattgtttcg 151  Q
    |||||||| |||||||||||| | ||| |||||||| || |||||||| ||||||||||| |||| ||||||||| ||| ||||||||||| |||| |||    
T  5989 ttttaggtggtgatgtgtttttgtggggtttatcttcagaggtgtttttaggtggttatgatgtaacgtctatatacggcaccatttgtatcttgtctcg 6088  T
Q  152 tccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    | |||||||||||||||| |||||||  |||||||||||||||    
T  6089 ttcatatcttgcgtcttgcggggatgacgtttaataatatttg 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 19197 - 19344
Alignment:
Q  47 agtctgttttaggtagtgatgtgttttggagggtttatctttaggggtgttttcaggtgg-ttatggtgtaccgtctatatgcggtaccatttgtatatt 145  Q
    |||||||||||||| ||||||| |||||| ||||||||||| ||   | |||| |||||| |||||||||||||||||||||||| ||||||||||| ||    
T  19197 agtctgttttaggtggtgatgtattttggtgggtttatcttcagatttttttt-aggtgggttatggtgtaccgtctatatgcggcaccatttgtatctt 19295  T
Q  146 gtttcgtccatatcttgcgtcttgtggggatggagtttaataatatttg 194  Q
    |||||||||||| | ||||||||| | |||||  |||||||||||||||    
T  19296 gtttcgtccataccatgcgtcttgcgaggatgacgtttaataatatttg 19344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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