View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0500_low_11 (Length: 391)
Name: NF0500_low_11
Description: NF0500
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0500_low_11 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0475 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 119 - 379
Target Start/End: Original strand, 1281418 - 1281678
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1281418 |
catccgcaatgagtcaagaatccaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
1281517 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1281518 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
1281617 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatctc |
379 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1281618 |
ctgaagttgctctggagtcataactgtaatgcttccgaaattcacataaacaacagatctc |
1281678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 172; Significance: 2e-92; HSPs: 34)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 119 - 386
Target Start/End: Original strand, 4617326 - 4617593
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
4617326 |
catccgcaatgagtcaagaatcctccgattgaagggtggttcaacactttgtcttgtggacaccaacttgctattaggcctctatctgcaatttcatttg |
4617425 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
||| |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||| |||| ||||||||||||||| |
|
|
| T |
4617426 |
taaactcagatgagaaaatcactgagccaccaatgacaagatcaggccttatgatccacaaaaatgatttcttgcaattggccaaaccccaagcaaattc |
4617525 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatctctgctcct |
386 |
Q |
| |
|
| | | |||||| || ||||||||||||||||| |||||||||||||||||||| |||| | |||||| |
|
|
| T |
4617526 |
cagtaattgctcgggtgtcataactgtaatgctgccgaaattcacataaacaactgatcccggctcct |
4617593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 119 - 386
Target Start/End: Original strand, 4602093 - 4602360
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4602093 |
catccacaatgagtcaagaatccgccgatcgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcatttg |
4602192 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| | || ||| |||| ||||||||| ||||| |
|
|
| T |
4602193 |
taaactcagatgacaaaatcactgagccaccaatgacaagatcaggcctaatgatccacaaaaatggtttatggcaattggccaaaccccaagcgaattc |
4602292 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatctctgctcct |
386 |
Q |
| |
|
| ||| | || ||||||||||||||||| || ||||||||||||||||| |||| | |||||| |
|
|
| T |
4602293 |
taataattgatggggtgtcataactgtaatgctgccaaaattcacataaacaacggatcccggctcct |
4602360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 119 - 386
Target Start/End: Original strand, 4564015 - 4564282
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| | || ||||||||||||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
4564015 |
catccgcaatgagtcaagaatccgccaattgaagggtggttcaatactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattca |
4564114 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| ||||||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||| ||||| |||| ||| |||| |||||||||||||| |
|
|
| T |
4564115 |
caaactcagatgacaaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaagggtttattgcaattggccaacccccaagcaaattc |
4564214 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatctctgctcct |
386 |
Q |
| |
|
| ||||| | || |||||||||||||||||||| ||||||||||||||||| |||| | |||||| |
|
|
| T |
4564215 |
caacagttgttttggtgtcataactgtaatgcttccaaaattcacataaacaacggatcccggctcct |
4564282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 119 - 375
Target Start/End: Original strand, 4506161 - 4506417
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||| |||||| |||||||| |||| |||||||||||||||||| | |
|
|
| T |
4506161 |
catccgcaatgagtcaagaatccaccaattgaagggtgatttaacactttctcttgtgaacaccagcttgctataaggcttctatctgaaatttcatttg |
4506260 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| || || ||||||| ||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||||| |||| |||||||||||| || |
|
|
| T |
4506261 |
caaactctgaagacaaaaccactgagccaccaattacaagatcaggcctaatgatccacaaaaagggtttcttgctattggccaaaccccaagcaaactc |
4506360 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacaga |
375 |
Q |
| |
|
|| || |||||||| ||||| ||| |||||||| |||||||||||||||||||| |
|
|
| T |
4506361 |
taaaaatttctccggagacataattgtgatgcttccaaaattcacataaacaacaga |
4506417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 119 - 377
Target Start/End: Original strand, 4461427 - 4461685
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| |||| |||||||||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4461427 |
catccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagcttgctattaggcctctatctgaaatttcattca |
4461526 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| |||||||||||||| | ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||| |||||||||||| || |
|
|
| T |
4461527 |
caaactcagatgacaaaataaacgagccgccaatgacaagatcaggcctaatgatccataaaaagggtttcttgctatcagccaaaccccaagcaaactc |
4461626 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatc |
377 |
Q |
| |
|
||||| || |||||||||||||| ||||| || ||||| ||||| |||||||||| |
|
|
| T |
4461627 |
taacagttgatcaggagtcataactgtgatgctgccaaaatttacatagacaacagatc |
4461685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 119 - 377
Target Start/End: Complemental strand, 4514949 - 4514691
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| | || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4514949 |
catccgcaatgagtcaagaatccgccaattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatctgcaatttcattca |
4514850 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| ||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||| ||||| | |||||||||||| |||| |||||||||||| || |
|
|
| T |
4514849 |
caaactcagacgacaaaaccactgagccaccaatgacaagatcaggcctaatgatccataaaaaggttttcttgctattggccaaaccccaagcaaactc |
4514750 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatc |
377 |
Q |
| |
|
| || |||||||| ||||| || ||||| || ||||| |||||||||||||||| |
|
|
| T |
4514749 |
taacaatttctccggagacataatcgtgatgctaccaaaattaacataaacaacagatc |
4514691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 119 - 378
Target Start/End: Original strand, 4574612 - 4574871
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
4574612 |
catccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttca |
4574711 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
||| |||||||| |||| ||| ||||| ||||||||||||||||||||| ||||||||||||| ||||| ||||| || |||| |||||||||||| || |
|
|
| T |
4574712 |
aaaaatcagatgagaaaaccaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggttttttgctgttggccaaaccccaagcaaactc |
4574811 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatct |
378 |
Q |
| |
|
|| | ||| ||| |||||| || ||||| || ||||| ||||||||||||||||| |
|
|
| T |
4574812 |
tacgagcttctctcgagacataacagtgatgctgccaaaatttacataaacaacagatct |
4574871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 119 - 315
Target Start/End: Original strand, 4560810 - 4561005
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
4560810 |
catccgcaatgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttc- |
4560908 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaa |
315 |
Q |
| |
|
||| |||||||| |||| ||| ||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| || |||| |||||||||||| |
|
|
| T |
4560909 |
aaaaatcagatgagaaaaccaccgagccaccaatgacaagatcaggcctaatgatccataaaaatggtttcttgctgttggccaaaccccaagcaaa |
4561005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 119 - 378
Target Start/End: Complemental strand, 4266994 - 4266735
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
4266994 |
catccgcaatgagtcaagaatccaccaatcgaagggtggttcaacactttatcttgtggacaccaacttgctattagtcctctatctgaaatttctttaa |
4266895 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
||| ||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||| || |||||||| || |||| |||||||||||| || |
|
|
| T |
4266894 |
aaaaatcagatgacaaaacaactgagcccccaatgacaagatcaggcctaattatccacaaaaaagggttcttgctgttggccaaaccccaagcaaactc |
4266795 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatct |
378 |
Q |
| |
|
|| | ||| | | ||||||||| ||||| || ||||| ||||||||||||||||| |
|
|
| T |
4266794 |
taagagcttctctcgtgacataactgtgatgctaccaaaatttacataaacaacagatct |
4266735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 119 - 376
Target Start/End: Original strand, 3172045 - 3172302
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
|||||||| |||||||||||| | || |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3172045 |
catccgcagtgagtcaagaatccgccaattgaaggatggttcaacactttctcttgcggacaccaacttgctattaggcctctatctgaaatttcattca |
3172144 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| || |||||||||| || ||||| ||||||||||||||||||||| | ||||||||||| ||||||||||| || || | |||||||||||| || |
|
|
| T |
3172145 |
caaactccgatgacaaaacaaccgagccaccaatgacaagatcaggcctaataatccacaaaaagggtttcttgctgttggctaaaccccaagcaaactc |
3172244 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagat |
376 |
Q |
| |
|
| || ||| ||| ||||||| | ||||| || ||||| ||||||||||||||| |
|
|
| T |
3172245 |
taataatttctcttgagacataactatgatgctgccaaaatttacataaacaacagat |
3172302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 119 - 375
Target Start/End: Original strand, 4457898 - 4458155
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||| |
|
|
| T |
4457898 |
catccacaatgagtcaagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctattaagcctctatcagaagtttcattca |
4457997 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatgg-tttcttgctattagccagaccccaagcaaatt |
317 |
Q |
| |
|
|||| || |||||||||| || ||||| ||||||||||||||||||||||| ||||||||||| || ||||||||| || |||| | |||||||||||| |
|
|
| T |
4457998 |
caaaatccgatgacaaaacaaccgagccaccaatgacaagatcaggcctagttatccacaaaaaaggttttcttgctgttggccaaaacccaagcaaatt |
4458097 |
T |
|
| Q |
318 |
cctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacaga |
375 |
Q |
| |
|
| || | ||| ||| ||||||||| |||||||| ||||| ||||||| |||||| |
|
|
| T |
4458098 |
ctaagagcttctcttgagacataactgtgatgcttccaaaatttacataaataacaga |
4458155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 119 - 372
Target Start/End: Complemental strand, 4613546 - 4613293
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| | || |||||||||||||| || |||| |||||| |||||||| || || ||||||||||||||||||||||||||| |
|
|
| T |
4613546 |
catccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattaggcctctatctgaaatttcattca |
4613447 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| || |||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| |||| |||||||||||| || |
|
|
| T |
4613446 |
caaactctgatgacaaaacaactgagccgccaatgacaagatcaggcctaatgatccacaaaaagggttgcttgctattcgccaaaccccaagcaaactc |
4613347 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaac |
372 |
Q |
| |
|
|||| || | ||||||||| || ||||| || ||||||||||||||||| |
|
|
| T |
4613346 |
taatagtttttctgcagtcataacggtcatgctcccaaaattcacataaacaac |
4613293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 119 - 371
Target Start/End: Original strand, 4622446 - 4622698
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| |||| |||| ||||||||| | |||| ||||||||||||||||| ||| |||||||||||| |||||||||||||| |
|
|
| T |
4622446 |
catccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattct |
4622545 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| |||||||||||||| | |||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||| || |
|
|
| T |
4622546 |
caaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatccacaaaaagggtttcttgctatcagccaaaccccaagcaaactc |
4622645 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaa |
371 |
Q |
| |
|
||||| || ||||||| ||||||||||| || |||||||| ||||||| |
|
|
| T |
4622646 |
taatagttgatctcgagtcatcactgtaatgctgccaaaattcacgtaaacaa |
4622698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 119 - 375
Target Start/End: Original strand, 4626255 - 4626511
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
4626255 |
catccacaatgagttaagaatccaccaattgaaggatggttcagtactttctcttgcggacaccagcttgcgattaggcctctatctgaaatttcattct |
4626354 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| || |||||| |||| | |||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||| || |
|
|
| T |
4626355 |
caaactcggatgacgaaataaatgagccaccaatcacaagatcaggcctaatgatccacaaaaagggtttcttgctatcagccaaaccccaagcaaactc |
4626454 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacaga |
375 |
Q |
| |
|
|||| || |||||||||||| ||| ||| || || ||||||||||||||||| |
|
|
| T |
4626455 |
taacagtttctgtggagtcataactataacgctgccaaagttcacataaacaacaga |
4626511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 119 - 386
Target Start/End: Complemental strand, 4299649 - 4299382
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| || |||||||||||| |||| |||||||||||||||| |||| |||||||||||| | ||||| |||||||||||| ||||||||||||| |
|
|
| T |
4299649 |
catccacagtgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacactagcttgcggttaggcctctatttgaaatttcattct |
4299550 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| |||||||||||||| | |||||||||||||||| || |||||| |||||||||||||||||||| ||| ||| |||| ||||||||||| || |
|
|
| T |
4299549 |
caaactcagatgacaaaataaacaagccgccaatgacaaggtctggcctaatgatccacaaaaatggtttcctgcaattggccaaaccccaagcaatctc |
4299450 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatctctgctcct |
386 |
Q |
| |
|
|||||||| |||||||||||||||| ||| || ||||||||||||||||| |||| | |||||| |
|
|
| T |
4299449 |
taacagttgctctggagtcataactgtaacgctgccaaaattcacataaacaaccgatcccggctcct |
4299382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 119 - 377
Target Start/End: Original strand, 4480997 - 4481255
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
4480997 |
catccgcaatgagtcaagaatccgccgattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatttgaaatttctttca |
4481096 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
| | ||||||||||| | ||||||||| ||||||||||||| || |||| | ||||||||||| ||| |||||||| || | |||||||||||| || |
|
|
| T |
4481097 |
aatactcagatgacaacaccactgagccaccaatgacaagattagacctaataatccacaaaaagttttttttgctattggcaaaaccccaagcaaactc |
4481196 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatc |
377 |
Q |
| |
|
|||| ||| ||| ||||| ||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
4481197 |
taagagtttctcttgagacataattgtgatgctgccaaaatttacataaacaacagatc |
4481255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 119 - 377
Target Start/End: Complemental strand, 4504225 - 4503967
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||| ||| |||||||| |
|
|
| T |
4504225 |
catccacaatgagtcaagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctacaagtcctctattagaagtttcattca |
4504126 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| ||||||||||| | | ||||||| ||||| ||||||||||||||| | ||||||||||| |||||||||||||| |||| |||||||||||| || |
|
|
| T |
4504125 |
caaaatcagatgacaacacctctgagccaccaataacaagatcaggcctaataatccacaaaaaaggtttcttgctattggccaaaccccaagcaaactc |
4504026 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatc |
377 |
Q |
| |
|
| || || || ||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
4504025 |
taacaatttatcttaagacataactgtaatgctgccaaaatttacataaacaacagatc |
4503967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 119 - 375
Target Start/End: Original strand, 4516625 - 4516881
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| | || | |||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||| ||| |||||||| |
|
|
| T |
4516625 |
catccacaatgagtcaagaatcctccaactgaaggatggttcaacactttctcttgcggacaccagcttgctattacgcctctatccgaagtttcattca |
4516724 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| || ||||||||||| || ||||| ||||||||||| ||||||||| | ||||||||||| ||||||||||| || |||| ||||||||| || || |
|
|
| T |
4516725 |
caaaatcggatgacaaaataaccgagccaccaatgacaaggtcaggcctaataatccacaaaaaaggtttcttgctgttggccaaaccccaagcgaactc |
4516824 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacaga |
375 |
Q |
| |
|
||||| || |||||||| || || |||||||| |||||||||||||| ||||| |
|
|
| T |
4516825 |
taacagttgatctggagtcatgaccgtgatgcttccaaaattcacataaactacaga |
4516881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 119 - 375
Target Start/End: Original strand, 4579736 - 4579992
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||||| |||| |||||| |||||||| || | |||||||||||||||||||||||||||| |
|
|
| T |
4579736 |
catccgcaatgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagctcgttattaggcctctatctgaaatttcattca |
4579835 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| || |||||||||| |||||||||| ||||||||||| |||||| ||||||||||||| |||| ||||||||| || | |||||| ||||| || |
|
|
| T |
4579836 |
caaactccgatgacaaaacagctgagccgccgatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgctaaaccccatgcaaactc |
4579935 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacaga |
375 |
Q |
| |
|
|||| || | |||||||||||| | ||| || |||||||||||||||||||| |
|
|
| T |
4579936 |
taacagtttttctgcagtcataactgtcaagctcccaaaattcacataaacaacaga |
4579992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 119 - 377
Target Start/End: Complemental strand, 4490183 - 4489925
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| |||| ||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
4490183 |
catccacaatgagtcaagaatccaccaattgaagggtgattcaataccttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttca |
4490084 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
||| ||||||||||| | | |||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||| || |||| |||||| ||||| || |
|
|
| T |
4490083 |
aaaaatcagatgacaacacctgtgagccaccaataacaagatcaggcctaatgatccacaaaaagggtttcttgctgttggccaaaccccatgcaaactc |
4489984 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatc |
377 |
Q |
| |
|
|| | ||| ||| |||||| || ||||| || ||||| |||||||||||||||| |
|
|
| T |
4489983 |
taatagcttctctcgagacataacagtgatgctgccaaaatttacataaacaacagatc |
4489925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 119 - 377
Target Start/End: Original strand, 4470107 - 4470365
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| |||||||| | | ||||||||||||||||||||| |||| |
|
|
| T |
4470107 |
catccgcaatgagtcaagaatccaccgattgaagggtggttcagtacttgctcttgaggacaccagttcacgattaggcctctatctgaaattccattta |
4470206 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
||| || ||||| |||| || |||||||||||||||||||| |||||| ||||||||||||| |||| ||||||||| |||| |||||||||||| || |
|
|
| T |
4470207 |
caatctctgatgagaaaactaccgagccgccaatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgccaaaccccaagcaaactc |
4470306 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatc |
377 |
Q |
| |
|
|||| ||| |||| ||||||||| | ||| |||||||| ||||| |||||||||| |
|
|
| T |
4470307 |
taacagtttctctggagacataactgtgacgctgccgaaatttacatagacaacagatc |
4470365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 119 - 372
Target Start/End: Original strand, 4592535 - 4592788
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| |||| |||||||||||||| || |||| |||||| |||||||| || || |||| |||||||||||||||||||||| |
|
|
| T |
4592535 |
catccacaatgagtcaagaatccaccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattacgcctctatctgaaatttcattca |
4592634 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| || |||||||||| | || ||| ||||||||||||||||||||| ||||||||||||| ||||| |||| ||| |||| |||||||||||| || |
|
|
| T |
4592635 |
caaactccgatgacaaaacaattgtgccaccaatgacaagatcaggcctaatgatccacaaaaaaggtttattgcaattggccaaaccccaagcaaactc |
4592734 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaac |
372 |
Q |
| |
|
| || ||| | |||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
4592735 |
taacattttctcttcattcataactgtaaggctgccgaaattcacataaacaac |
4592788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 119 - 375
Target Start/End: Complemental strand, 4259982 - 4259726
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
|||||||||||||| |||||| |||| | ||||| |||||||| |||| |||||| |||||||| || || |||||||||||||| ||||||||| || |
|
|
| T |
4259982 |
catccgcaatgagttaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccagctcgcgattaggcctctatccgaaatttcactct |
4259883 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| |||||||||||||| | ||||| ||||| | || ||||||||| ||||||||||||| |||||||||||||| |||| ||||||||||| || |
|
|
| T |
4259882 |
caaactcagatgacaaaataaaggagccaccaataatgaggtcaggcctaatgatccacaaaaagggtttcttgctattggccaatccccaagcaaactc |
4259783 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacaga |
375 |
Q |
| |
|
|| ||| || |||||||||||||||||||| || |||||||| ||||||||||| |
|
|
| T |
4259782 |
taaaaattgatctggagtcataactgtaatgctgccaaaattcacgtaaacaacaga |
4259726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 119 - 315
Target Start/End: Original strand, 4598475 - 4598671
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
|||||||||||||| |||||| |||| |||||||| ||||| || |||| |||||| ||||||| ||||| | || |||||||||||||||||||||| |
|
|
| T |
4598475 |
catccgcaatgagttaagaatccaccaattgaaggatggtttaatacttgctcttgcagacaccagcttgcaactaagcctctatctgaaatttcattca |
4598574 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaa |
315 |
Q |
| |
|
|||| || |||||||||| || ||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||| |||||||||||| |
|
|
| T |
4598575 |
caaactccgatgacaaaacaaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttcttgctattggccaaaccccaagcaaa |
4598671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 119 - 372
Target Start/End: Original strand, 4585940 - 4586193
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| || |||||||||||| |||| ||||||||||||||||| |||| |||||| || ||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
4585940 |
catccacagtgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcgattaggcctctatctgaaatttcattct |
4586039 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
||| ||||||||||||| || || || ||||||||||||||||| ||| ||||||| ||||| ||| ||||||||| |||| |||||||||||| || |
|
|
| T |
4586040 |
taaactcagatgacaaaaccaaggaaccaccaatgacaagatcaggtctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactc |
4586139 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaac |
372 |
Q |
| |
|
|||| || | |||||||||||| |||| || ||||||||||||||||| |
|
|
| T |
4586140 |
taatagtttttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
4586193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 119 - 372
Target Start/End: Original strand, 4571276 - 4571529
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| || ||||||||||| |||| |||||||| |||||||| ||||||||||| | ||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
4571276 |
catccacagtgagtcaagaaaccaccaattgaaggatggttcaatactttctcttgcgagcaccaaccagcaattaggcctctatctgaaatttcattca |
4571375 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| || |||||||||| |||||||| |||||||||||||| |||||| ||||||||||||| ||| ||||||||| || | |||||| ||||| || |
|
|
| T |
4571376 |
caaactccgatgacaaaacaactgagccaccaatgacaagatcgggcctaatgatccacaaaaagagttgcttgctatttgctaaaccccatgcaaactc |
4571475 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaac |
372 |
Q |
| |
|
|||| || | |||||||||||| |||| || ||||||||||||||||| |
|
|
| T |
4571476 |
taacagtttttctgaagtcataactgtcctgctcccaaaattcacataaacaac |
4571529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 382140 - 382235
Alignment:
| Q |
17 |
aacttatggttatcaatatcttaagatgcatgtgagacatatcttgattccatactaaactgaattaaatcaatacaaatctctggtgtgtatatt |
112 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
382140 |
aactcatggttatcaatatcttaagatgcatgtgagacatatcttgattcgatactaaactgaattaaatcaatacaaatctctggtgtgtatatt |
382235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 119 - 294
Target Start/End: Original strand, 4568360 - 4568535
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| || | |||||||||||||||||||| |||||| |||||||| ||||||||| |||||||||| ||| || ||||| |
|
|
| T |
4568360 |
catccacaatgagtcaagaatcgtccaactgaagggtggttcaacacttgctcttgcggacaccagcttgctatttggcctctatccgaagttccattca |
4568459 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgct |
294 |
Q |
| |
|
|||| || ||||||||||| |||||||| ||||||||||| | ||||||| ||||||||||||| ||||||||||| |
|
|
| T |
4568460 |
caaactcggatgacaaaataactgagccaccaatgacaagctaaggcctaatgatccacaaaaaaggtttcttgct |
4568535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 119 - 372
Target Start/End: Original strand, 4557429 - 4557682
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| |||| |||||||| ||||| || |||| |||||| || ||||| | || |||||||||||||||||||||||||| |
|
|
| T |
4557429 |
catccacaatgagtcaagaatccaccaattgaaggatggtttaatacttgctcttgcgggcaccagcccgcgattaggcctctatctgaaatttcattga |
4557528 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| || |||||||||| |||||||| || ||||||||||| |||||| ||||||||||||| |||| ||||||||| || | |||||| ||||| || |
|
|
| T |
4557529 |
caaactccgatgacaaaacaactgagccaccgatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgctaaaccccatgcaaactc |
4557628 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaac |
372 |
Q |
| |
|
|||| || | ||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
4557629 |
taacagtttttctgccgtcataactgtcatgctcccaaaattcacataaacaac |
4557682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 119 - 375
Target Start/End: Complemental strand, 4256439 - 4256196
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| |||| | ||||| |||||||| |||| |||||| ||||||||||| | ||||| |||||||| |||| | |
|
|
| T |
4256439 |
catcctcaatgagtcaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccaactctcgattagtcctctatccgaaact------- |
4256347 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
||||||||||||| | ||||| |||||||| || ||||||||| |||| ||||||||||||||||||||||| |||| ||||||||||| || |
|
|
| T |
4256346 |
------cagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatacacaaaaatggtttcttgctattggccaatccccaagcaaactc |
4256253 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacaga |
375 |
Q |
| |
|
||||| || |||||||||||||||||||| || |||||||| ||||||||||| |
|
|
| T |
4256252 |
taacagttgatctggagtcataactgtaatgctgccaaaattcacgtaaacaacaga |
4256196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 4493259 - 4493346
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctg |
206 |
Q |
| |
|
||||| ||||||||||||||| |||| || ||| ||||||||| || ||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
4493259 |
catccacaatgagtcaagaatccaccaatcgaatggtggttcagcagtttctcttgtggacaccaactagcaattaggcctctatctg |
4493346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 30864065 - 30863989
Alignment:
| Q |
33 |
tatcttaagatgcatgtgagacatatcttgattccatactaaactgaattaaatcaatacaaatctctggtgtgtat |
109 |
Q |
| |
|
||||||| ||| |||||||| | ||||| ||||| |||||||| |||| | |||| |||||||||||| |||||||| |
|
|
| T |
30864065 |
tatcttacgatacatgtgagtcgtatctcgattcaatactaaaatgaactcaatcgatacaaatctctagtgtgtat |
30863989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 6300370 - 6300454
Alignment:
| Q |
25 |
gttatcaatatcttaagatgcatgtgagacatatcttgattccatactaaactgaattaaatcaatacaaatctctggtgtgtat |
109 |
Q |
| |
|
|||||||||||| || ||||||| ||| | |||||| |||| |||||| |||||| | |||| ||| |||||||||||||||| |
|
|
| T |
6300370 |
gttatcaatatcatataatgcatgcgagtcgtatctttattcgatactatactgaactcaatcgatatgaatctctggtgtgtat |
6300454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 6307180 - 6307264
Alignment:
| Q |
25 |
gttatcaatatcttaagatgcatgtgagacatatcttgattccatactaaactgaattaaatcaatacaaatctctggtgtgtat |
109 |
Q |
| |
|
|||||||||||| || ||||||| ||| | |||||| |||| |||||| |||||| | |||| ||| |||||||||||||||| |
|
|
| T |
6307180 |
gttatcaatatcatataatgcatgcgagtcgtatctttattcgatactatactgaactcaatcgatatgaatctctggtgtgtat |
6307264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 151; Significance: 8e-80; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 119 - 377
Target Start/End: Original strand, 1674530 - 1674788
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
|||||||| || ||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| |
|
|
| T |
1674530 |
catccgcagtgtgtcaagaatccgccgattgaagggtggttcaacactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttca |
1674629 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || |||| |||||||||||| || |
|
|
| T |
1674630 |
taaactcagatgacaaaaccactgagccaccaatgacaagatcaggcctagtgatccacaaaaaaggtttcttgcaatcggccaaaccccaagcaaactc |
1674729 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacagatc |
377 |
Q |
| |
|
| ||||| || ||||||||||| ||||||| |||||||||||||||||||| |||| |
|
|
| T |
1674730 |
caatagttgatctggagtcataacaataatgctaccgaaattcacataaacaaccgatc |
1674788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 119 - 315
Target Start/End: Complemental strand, 20863671 - 20863475
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| |||||||| | ||| |||| |||||||| ||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
20863671 |
catccacaatgagttagaaatccaccaattgaaggatggttcaacaccttctcttgtggacaccaactcgcgattaggcctctatctgaaatttcattca |
20863572 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaa |
315 |
Q |
| |
|
|||| ||||||| |||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| || |||| |||||| ||||| |
|
|
| T |
20863571 |
caaacgcagatgaaaaaatcaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttcttgctgttggccaaaccccatgcaaa |
20863475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 119 - 372
Target Start/End: Complemental strand, 16686095 - 16685842
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| |||||||| |||||| ||||||||||||| ||||| || |||| |||||| || ||||| || || ||||||| ||||||||| ||||||||| |
|
|
| T |
16686095 |
catccacaatgagttaagaatccaccgattgaaggatggtttaatacttgctcttgcgggcaccagctcgcgattaggcttctatctgagatttcattct |
16685996 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
||| ||||||||||||| ||| || |||| |||||||||||||| |||| ||||||| ||| ||| ||||||||| | || |||||||||||| || |
|
|
| T |
16685995 |
taaactcagatgacaaaaccacggaaccgcaaatgacaagatcagacctaatgatccattgaaaatgttgcttgctattggtcaaaccccaagcaaactc |
16685896 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaac |
372 |
Q |
| |
|
|||| || | |||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
16685895 |
taatagtttttctgcagtcataactgtcatgctcccaaaattcacataaacaac |
16685842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 30035336 - 30035413
Alignment:
| Q |
22 |
atggttatcaatatcttaagatgcatgtgagacatatcttgattccatactaaactgaattaaatcaatacaaatctc |
99 |
Q |
| |
|
|||||||||| ||||||| ||| |||||||| | ||||| |||| ||||| || |||||| |||| ||||||||||| |
|
|
| T |
30035336 |
atggttatcagtatcttatgatacatgtgagtcgtatctcaattcaatacttaattgaattcaatcgatacaaatctc |
30035413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 141; Significance: 8e-74; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 119 - 375
Target Start/End: Complemental strand, 3547 - 3291
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| |||| |||||||||||| ||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
3547 |
catccacaatgagtcaagaatccaccaattgaagggtggatcagtacttgctcttgtggacaccagcttgtgattaggcctctatctgaaatttcattct |
3448 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| || ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| ||||||||||||||| |
|
|
| T |
3447 |
caaattctgatgacaaaataaacgagccgccaatgacaagatcaggcctaatgatccacaaaaacggtttcttgctatcggccaaaccccaagcaaattc |
3348 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacaga |
375 |
Q |
| |
|
||||| | |||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
3347 |
taacagttgatttggagtcataactgtaatgctgccgaaattcacataaacaacaga |
3291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 119 - 375
Target Start/End: Original strand, 3086724 - 3086980
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||| ||||||||||||||| |||| ||||||||||| ||||| |||| |||||| |||||||| ||||| ||||| ||||||||||||||||| ||| |
|
|
| T |
3086724 |
catccacaatgagtcaagaatccaccaattgaagggtgattcaatacttgctcttgcggacaccagcttgcgattagacctctatctgaaatttctttct |
3086823 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| |||||||||| ||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| || |
|
|
| T |
3086824 |
caaactcagatgacataataaaggagccgccaatgacaagatcaggcctaatgatccacaaaaatggtttcttgctattggccaaaccccaagcaaactc |
3086923 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaacaga |
375 |
Q |
| |
|
|||||||| ||||||||||||||||||| || ||| |||||||||||||||| |
|
|
| T |
3086924 |
taatagttgctcttgagtcataactgtaatgctgccaaaactcacataaacaacaga |
3086980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 119 - 372
Target Start/End: Complemental strand, 4514 - 4261
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||||||| || || ||||||||||||||||||||||||||| |
|
|
| T |
4514 |
catccgcaatgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattct |
4415 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattc |
318 |
Q |
| |
|
|||| |||||||||||||| | ||||||||||||||||| ||||||||| ||||||||||||| | |||||| | ||| | || | |||||||||| || |
|
|
| T |
4414 |
caaactcagatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaacccaagcaaactc |
4315 |
T |
|
| Q |
319 |
ctgaagttgctccggagtcataactgtaatgcttccgaaattcacataaacaac |
372 |
Q |
| |
|
||||| || ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4314 |
taacagttgatctggagtcataactgtaatgcttccaaaattcacataaacaac |
4261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 113; Significance: 4e-57; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 119 - 315
Target Start/End: Original strand, 24103303 - 24103499
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
||||||||||||||||||||| |||| || ||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| ||| || |
|
|
| T |
24103303 |
catccgcaatgagtcaagaatccaccaatcgaagggtggtttaacactttatcttgtggacaccaacttgctattagtcctctatctgaaacttctttaa |
24103402 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaa |
315 |
Q |
| |
|
||| ||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||| || ||||||||||| |||| |||||||||||| |
|
|
| T |
24103403 |
aaaaatcagatgacaaaacaactgagcccccaatgacaagatcaggcctaattatccacaaaaaagggttcttgctattggccaaaccccaagcaaa |
24103499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 119 - 293
Target Start/End: Complemental strand, 27999927 - 27999753
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcg |
218 |
Q |
| |
|
|||||||| ||||||||||| | | |||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| |
|
|
| T |
27999927 |
catccgcagtgagtcaagaacccgctgattgaagggtggttcaaaactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcc |
27999828 |
T |
|
| Q |
219 |
caaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgc |
293 |
Q |
| |
|
||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
27999827 |
taaactcagatgacaaaaccactgagccaccaatgacaagattaggcctagtgatccacaaaaaaggtttcttgc |
27999753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 3261 - 3162
Alignment:
| Q |
195 |
ggcctctatctgaaatttcattcgcaaagtcagatgacaaaatcac-tgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgc |
293 |
Q |
| |
|
|||||||||||||| |||||||| |||| ||| || ||||| ||| ||| |||||||||||||| |||| |||| ||||||||| ||| |||||||||| |
|
|
| T |
3261 |
ggcctctatctgaagtttcattctcaaactcatataacaaag-cacatgatccgccaatgacaaggtcagacctaatgatccacacaaagggtttcttgc |
3163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 3512 - 3428
Alignment:
| Q |
119 |
catccgcaatgagtcaagaatacaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatc |
204 |
Q |
| |
|
||||| |||||||| |||||| |||| | | |||||||||||||||||| ||||| |||||||| ||||| | ||||||| |||| |
|
|
| T |
3512 |
catccacaatgagttaagaatccaccaact-aagggtggttcaacacttgctcttacggacaccatcttgcgactaggcctatatc |
3428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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