View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0508_high_1 (Length: 342)

Name: NF0508_high_1
Description: NF0508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0508_high_1
NF0508_high_1
[»] chr3 (68 HSPs)
chr3 (6-313)||(54017920-54018227)
chr3 (6-313)||(3135177-3135483)
chr3 (9-158)||(15773094-15773243)
chr3 (6-167)||(37990743-37990903)
chr3 (6-142)||(22304488-22304623)
chr3 (6-218)||(21832447-21832650)
chr3 (6-128)||(32462662-32462786)
chr3 (6-133)||(11661878-11662005)
chr3 (18-108)||(42342206-42342296)
chr3 (6-94)||(22304214-22304300)
chr3 (6-133)||(41359869-41359992)
chr3 (6-87)||(29644685-29644767)
chr3 (6-70)||(31190007-31190071)
chr3 (153-313)||(41359632-41359794)
chr3 (15-94)||(22304061-22304140)
chr3 (6-70)||(29645006-29645070)
chr3 (6-70)||(42342492-42342556)
chr3 (6-70)||(43346640-43346704)
chr3 (6-70)||(54018302-54018366)
chr3 (179-313)||(22303850-22303984)
chr3 (6-60)||(39389070-39389124)
chr3 (9-70)||(25739532-25739593)
chr3 (6-67)||(35946515-35946576)
chr3 (6-71)||(43346895-43346960)
chr3 (9-70)||(53577354-53577415)
chr3 (11-67)||(8327897-8327953)
chr3 (6-174)||(9240038-9240203)
chr3 (6-70)||(15772844-15772908)
chr3 (131-313)||(33803099-33803281)
chr3 (7-67)||(33803357-33803417)
chr3 (10-70)||(52634666-52634726)
chr3 (6-70)||(53118078-53118142)
chr3 (113-218)||(8328117-8328222)
chr3 (6-94)||(4823623-4823709)
chr3 (6-71)||(25755383-25755448)
chr3 (6-71)||(37991081-37991146)
chr3 (6-51)||(39935059-39935104)
chr3 (6-70)||(3135565-3135629)
chr3 (73-215)||(8328225-8328368)
chr3 (6-70)||(12114666-12114730)
chr3 (6-70)||(39914242-39914306)
chr3 (6-71)||(32463004-32463070)
chr3 (180-313)||(37990873-37991006)
chr3 (6-71)||(45901702-45901768)
chr3 (6-60)||(50612556-50612610)
chr3 (248-313)||(54017780-54017845)
chr3 (39-107)||(2299930-2299997)
chr3 (8-68)||(45395759-45395819)
chr3 (178-264)||(32462794-32462879)
chr3 (9-70)||(11661525-11661586)
chr3 (179-224)||(25739330-25739375)
chr3 (6-67)||(33175768-33175829)
chr3 (28-68)||(12747878-12747918)
chr3 (6-70)||(32589694-32589757)
chr3 (6-70)||(49336791-49336855)
chr3 (190-313)||(53577493-53577616)
chr3 (9-60)||(51886561-51886612)
chr3 (28-70)||(1634441-1634483)
chr3 (179-313)||(15772983-15773116)
chr3 (6-60)||(37726504-37726558)
chr3 (188-309)||(9239946-9240066)
chr3 (28-65)||(39336355-39336392)
chr3 (8-64)||(7767420-7767476)
chr3 (28-108)||(33809134-33809213)
chr3 (6-50)||(42584926-42584970)
chr3 (28-67)||(47965041-47965080)
chr3 (29-67)||(46546452-46546490)
chr3 (261-313)||(42342067-42342119)
[»] chr6 (50 HSPs)
chr6 (6-313)||(16107807-16108117)
chr6 (6-264)||(2579209-2579472)
chr6 (8-313)||(2578549-2578864)
chr6 (15-313)||(2579605-2579901)
chr6 (6-270)||(10073720-10073977)
chr6 (6-176)||(29518806-29518974)
chr6 (6-129)||(16454837-16454961)
chr6 (6-128)||(2378060-2378180)
chr6 (6-152)||(10074095-10074238)
chr6 (178-313)||(16454704-16454839)
chr6 (8-70)||(2579978-2580040)
chr6 (9-94)||(3409628-3409711)
chr6 (6-94)||(10074467-10074552)
chr6 (6-70)||(593813-593877)
chr6 (6-70)||(1950289-1950353)
chr6 (6-70)||(2377744-2377808)
chr6 (8-129)||(6071063-6071184)
chr6 (8-94)||(8481894-8481978)
chr6 (6-60)||(14748442-14748496)
chr6 (6-60)||(29518503-29518557)
chr6 (6-60)||(32741179-32741233)
chr6 (8-164)||(33605875-33606027)
chr6 (6-70)||(5832130-5832194)
chr6 (6-70)||(5958707-5958771)
chr6 (6-70)||(6999900-6999964)
chr6 (8-60)||(26544049-26544101)
chr6 (6-60)||(3058226-3058280)
chr6 (6-60)||(3409259-3409313)
chr6 (6-67)||(10911558-10911620)
chr6 (179-313)||(29518632-29518765)
chr6 (6-60)||(35210204-35210258)
chr6 (6-70)||(16107668-16107732)
chr6 (6-70)||(16454565-16454629)
chr6 (6-72)||(32460684-32460750)
chr6 (9-54)||(9062456-9062501)
chr6 (6-87)||(2578939-2579016)
chr6 (6-60)||(1127360-1127414)
chr6 (6-60)||(1846748-1846802)
chr6 (211-309)||(2377887-2377985)
chr6 (179-313)||(10074259-10074392)
chr6 (211-313)||(35210333-35210434)
chr6 (7-56)||(3415462-3415511)
chr6 (33-68)||(7588355-7588390)
chr6 (71-129)||(12092201-12092262)
chr6 (275-313)||(2843684-2843722)
chr6 (65-142)||(2975473-2975549)
chr6 (6-70)||(2843544-2843608)
chr6 (8-68)||(33605646-33605706)
chr6 (66-94)||(35210457-35210485)
chr6 (260-308)||(35210554-35210602)
[»] scaffold0391 (3 HSPs)
scaffold0391 (6-260)||(1210-1465)
scaffold0391 (9-260)||(3092-3345)
scaffold0391 (68-313)||(1464-1712)
[»] chr5 (58 HSPs)
chr5 (6-271)||(13415864-13416128)
chr5 (6-271)||(26074399-26074666)
chr5 (8-264)||(26074888-26075138)
chr5 (8-313)||(623947-624248)
chr5 (6-170)||(3295119-3295283)
chr5 (6-264)||(24489308-24489559)
chr5 (6-128)||(6500756-6500876)
chr5 (28-129)||(31509554-31509655)
chr5 (111-313)||(25328064-25328262)
chr5 (6-89)||(26074250-26074330)
chr5 (18-218)||(35150570-35150789)
chr5 (48-104)||(15370370-15370426)
chr5 (6-70)||(36492321-36492385)
chr5 (25-164)||(13785732-13785868)
chr5 (9-70)||(12662759-12662820)
chr5 (6-70)||(299479-299543)
chr5 (6-70)||(6224186-6224250)
chr5 (6-70)||(42405700-42405764)
chr5 (6-65)||(35150002-35150061)
chr5 (9-70)||(15370089-15370150)
chr5 (6-70)||(25327925-25327989)
chr5 (6-70)||(26075266-26075330)
chr5 (6-70)||(40296419-40296483)
chr5 (6-60)||(32487394-32487448)
chr5 (9-172)||(38427447-38427599)
chr5 (182-313)||(6500579-6500709)
chr5 (18-71)||(35151027-35151080)
chr5 (6-67)||(36568671-36568732)
chr5 (8-129)||(36522002-36522121)
chr5 (6-60)||(6500451-6500504)
chr5 (6-70)||(11417081-11417143)
chr5 (9-70)||(35914839-35914900)
chr5 (6-67)||(41632775-41632836)
chr5 (6-58)||(7768852-7768904)
chr5 (6-58)||(18603224-18603276)
chr5 (8-67)||(1028623-1028682)
chr5 (8-67)||(39309677-39309736)
chr5 (6-68)||(3295448-3295509)
chr5 (67-128)||(9498411-9498473)
chr5 (6-60)||(27502140-27502194)
chr5 (179-236)||(3295249-3295306)
chr5 (9-54)||(41170640-41170685)
chr5 (6-70)||(300949-301013)
chr5 (8-60)||(623818-623870)
chr5 (8-60)||(5723897-5723949)
chr5 (6-70)||(35167942-35168006)
chr5 (179-313)||(38427348-38427483)
chr5 (14-70)||(26900082-26900138)
chr5 (6-70)||(34753129-34753193)
chr5 (6-57)||(6225047-6225098)
chr5 (275-313)||(3295336-3295374)
chr5 (6-60)||(9498758-9498812)
chr5 (183-253)||(15370268-15370338)
chr5 (7-60)||(29549360-29549413)
chr5 (9-57)||(2411010-2411058)
chr5 (6-58)||(26074320-26074372)
chr5 (28-68)||(36527209-36527249)
chr5 (6-70)||(41635295-41635359)
[»] chr4 (84 HSPs)
chr4 (7-313)||(45489434-45489741)
chr4 (8-264)||(20826015-20826269)
chr4 (6-215)||(44621270-44621480)
chr4 (6-264)||(2740869-2741125)
chr4 (6-313)||(49076550-49076858)
chr4 (6-313)||(54108666-54108967)
chr4 (64-312)||(16889313-16889562)
chr4 (6-243)||(39404217-39404452)
chr4 (8-142)||(44620578-44620712)
chr4 (105-313)||(23817498-23817708)
chr4 (6-92)||(52884856-52884941)
chr4 (8-94)||(3341094-3341180)
chr4 (6-105)||(22028063-22028162)
chr4 (6-264)||(43174321-43174561)
chr4 (6-127)||(36629172-36629291)
chr4 (6-68)||(3700357-3700419)
chr4 (6-70)||(10245910-10245974)
chr4 (6-70)||(36608763-36608827)
chr4 (9-90)||(10246317-10246398)
chr4 (7-68)||(41707567-41707628)
chr4 (6-67)||(52884688-52884749)
chr4 (82-313)||(22028163-22028396)
chr4 (179-313)||(41370486-41370618)
chr4 (9-105)||(3244556-3244649)
chr4 (6-72)||(36572007-36572073)
chr4 (8-70)||(50002416-50002478)
chr4 (6-67)||(2740693-2740754)
chr4 (9-70)||(22183369-22183430)
chr4 (9-70)||(25483326-25483387)
chr4 (178-313)||(3340936-3341070)
chr4 (6-70)||(4390203-4390267)
chr4 (6-70)||(34646751-34646815)
chr4 (6-80)||(16888918-16888993)
chr4 (135-264)||(44621177-44621307)
chr4 (6-60)||(55933226-55933280)
chr4 (9-70)||(1731752-1731813)
chr4 (6-67)||(20825829-20825890)
chr4 (8-65)||(39404013-39404070)
chr4 (6-70)||(4955419-4955483)
chr4 (8-60)||(50630859-50630911)
chr4 (31-128)||(18932887-18932982)
chr4 (6-69)||(51768162-51768225)
chr4 (125-238)||(31691356-31691470)
chr4 (6-72)||(22028471-22028539)
chr4 (6-67)||(32941225-32941286)
chr4 (6-78)||(44620926-44620999)
chr4 (6-67)||(54741280-54741341)
chr4 (6-70)||(44620286-44620350)
chr4 (12-68)||(45050593-45050649)
chr4 (8-60)||(50788087-50788139)
chr4 (6-65)||(3340802-3340861)
chr4 (6-70)||(54017804-54017870)
chr4 (8-70)||(11348432-11348494)
chr4 (8-70)||(19504695-19504757)
chr4 (188-270)||(45496723-45496804)
chr4 (6-60)||(49880160-49880214)
chr4 (9-63)||(54017700-54017754)
chr4 (6-67)||(39792962-39793023)
chr4 (180-261)||(50627668-50627748)
chr4 (6-66)||(49076932-49076992)
chr4 (9-57)||(50459724-50459772)
chr4 (6-50)||(54343103-54343147)
chr4 (19-70)||(11706636-11706687)
chr4 (6-60)||(41370357-41370411)
chr4 (6-70)||(16889638-16889703)
chr4 (252-313)||(25483465-25483526)
chr4 (6-51)||(44620362-44620407)
chr4 (9-62)||(49302902-49302955)
chr4 (18-58)||(40067045-40067085)
chr4 (25-68)||(6876218-6876261)
chr4 (179-313)||(10246048-10246182)
chr4 (274-313)||(22183252-22183291)
chr4 (8-67)||(28034222-28034281)
chr4 (6-70)||(54936190-54936250)
chr4 (43-101)||(11783308-11783365)
chr4 (231-313)||(19895425-19895506)
chr4 (283-313)||(50002555-50002585)
chr4 (6-70)||(54108527-54108590)
chr4 (11-60)||(6975563-6975612)
chr4 (179-255)||(18933027-18933101)
chr4 (41-70)||(23817783-23817812)
chr4 (6-51)||(44621011-44621056)
chr4 (9-65)||(34004689-34004744)
chr4 (283-315)||(55933121-55933153)
[»] chr8 (68 HSPs)
chr8 (6-313)||(45122753-45123060)
chr8 (8-313)||(8918870-8919173)
chr8 (9-270)||(147623-147880)
chr8 (6-208)||(40518437-40518636)
chr8 (6-94)||(9309321-9309409)
chr8 (6-128)||(30359540-30359663)
chr8 (7-128)||(1013976-1014096)
chr8 (11-109)||(6731857-6731953)
chr8 (6-130)||(18372360-18372483)
chr8 (6-128)||(3669993-3670114)
chr8 (9-167)||(18371763-18371920)
chr8 (16-170)||(18372485-18372638)
chr8 (6-138)||(45121760-45121892)
chr8 (6-172)||(18372803-18372968)
chr8 (106-263)||(9608932-9609088)
chr8 (6-142)||(18373035-18373171)
chr8 (6-106)||(34835165-34835263)
chr8 (6-246)||(45122450-45122678)
chr8 (6-158)||(9482708-9482854)
chr8 (6-107)||(34835427-34835529)
chr8 (6-107)||(34835693-34835795)
chr8 (128-238)||(9483031-9483143)
chr8 (6-70)||(147441-147505)
chr8 (8-70)||(3038396-3038458)
chr8 (6-71)||(6876966-6877032)
chr8 (6-67)||(41972151-41972212)
chr8 (6-70)||(25561920-25561984)
chr8 (6-70)||(30359261-30359325)
chr8 (10-70)||(33113475-33113535)
chr8 (6-65)||(45122161-45122220)
chr8 (8-94)||(4154386-4154471)
chr8 (6-67)||(9608738-9608799)
chr8 (6-71)||(34834865-34834930)
chr8 (179-313)||(1014141-1014274)
chr8 (6-65)||(1514019-1514078)
chr8 (179-313)||(3669816-3669948)
chr8 (128-264)||(9482868-9483005)
chr8 (6-60)||(1014349-1014403)
chr8 (6-60)||(3669687-3669741)
chr8 (9-71)||(8794100-8794162)
chr8 (6-60)||(30441081-30441135)
chr8 (113-223)||(40579352-40579461)
chr8 (8-62)||(45122016-45122070)
chr8 (9-67)||(9308970-9309030)
chr8 (25-69)||(5915863-5915907)
chr8 (6-50)||(25561748-25561792)
chr8 (9-69)||(32640634-32640694)
chr8 (74-176)||(3038099-3038201)
chr8 (6-53)||(41416275-41416322)
chr8 (43-94)||(43274708-43274759)
chr8 (8-70)||(37544596-37544658)
chr8 (9-70)||(70381-70441)
chr8 (8-67)||(4154772-4154831)
chr8 (9-68)||(5420643-5420702)
chr8 (8-67)||(20995507-20995566)
chr8 (204-271)||(34835046-34835112)
chr8 (11-70)||(43274888-43274947)
chr8 (11-91)||(6651476-6651552)
chr8 (179-313)||(9309110-9309243)
chr8 (6-56)||(18380121-18380171)
chr8 (6-55)||(20130454-20130503)
chr8 (6-68)||(40518061-40518125)
chr8 (11-66)||(12283867-12283922)
chr8 (28-67)||(18645713-18645752)
chr8 (220-313)||(40518200-40518293)
chr8 (8-65)||(5274770-5274827)
chr8 (6-35)||(9483291-9483320)
chr8 (275-315)||(32305604-32305644)
[»] scaffold0734 (2 HSPs)
scaffold0734 (6-313)||(5526-5831)
scaffold0734 (6-70)||(5386-5450)
[»] chr7 (63 HSPs)
chr7 (6-236)||(7553848-7554079)
chr7 (10-269)||(40094502-40094752)
chr7 (6-142)||(30244619-30244755)
chr7 (6-169)||(30245385-30245548)
chr7 (6-270)||(45434427-45434690)
chr7 (43-238)||(48243218-48243415)
chr7 (9-313)||(1085355-1085645)
chr7 (6-125)||(30244204-30244324)
chr7 (6-109)||(30245028-30245131)
chr7 (6-91)||(30255308-30255393)
chr7 (6-141)||(22566766-22566901)
chr7 (6-128)||(14681442-14681564)
chr7 (95-264)||(47129272-47129441)
chr7 (6-70)||(7517570-7517634)
chr7 (179-313)||(37533260-37533393)
chr7 (179-312)||(37532907-37533039)
chr7 (6-94)||(37533114-37533200)
chr7 (8-72)||(1085722-1085786)
chr7 (6-70)||(24177425-24177489)
chr7 (6-70)||(41910698-41910762)
chr7 (6-69)||(36109021-36109084)
chr7 (6-70)||(22567143-22567206)
chr7 (6-70)||(40094878-40094942)
chr7 (6-70)||(43241485-43241549)
chr7 (6-70)||(45433231-45433295)
chr7 (9-70)||(36622950-36623011)
chr7 (6-70)||(23481-23545)
chr7 (6-70)||(118405-118469)
chr7 (43-164)||(37345815-37345933)
chr7 (6-70)||(45754706-45754769)
chr7 (69-238)||(28300365-28300532)
chr7 (6-60)||(29157565-29157619)
chr7 (6-67)||(8128545-8128606)
chr7 (183-313)||(45433370-45433497)
chr7 (41-128)||(45697845-45697929)
chr7 (10-71)||(47129084-47129145)
chr7 (6-70)||(16569186-16569250)
chr7 (6-70)||(16596412-16596476)
chr7 (6-70)||(24838806-24838870)
chr7 (6-70)||(34218138-34218202)
chr7 (6-70)||(36534888-36534952)
chr7 (6-70)||(41854625-41854688)
chr7 (6-69)||(36939837-36939900)
chr7 (179-270)||(37345753-37345843)
chr7 (179-313)||(30245284-30245418)
chr7 (8-70)||(36967335-36967397)
chr7 (9-70)||(9901635-9901695)
chr7 (6-67)||(28301647-28301708)
chr7 (6-70)||(30032557-30032621)
chr7 (9-65)||(40230398-40230454)
chr7 (6-53)||(11845198-11845245)
chr7 (6-57)||(37533468-37533519)
chr7 (6-52)||(19122740-19122785)
chr7 (31-108)||(4124217-4124293)
chr7 (6-55)||(44361567-44361616)
chr7 (6-58)||(6054562-6054614)
chr7 (189-313)||(30244481-30244605)
chr7 (16-70)||(20599304-20599358)
chr7 (87-139)||(30253830-30253884)
chr7 (47-129)||(10342191-10342271)
chr7 (186-313)||(30253699-30253826)
chr7 (179-207)||(45697753-45697781)
chr7 (178-270)||(45754886-45754977)
[»] chr2 (67 HSPs)
chr2 (6-313)||(7598357-7598663)
chr2 (6-264)||(36785667-36785925)
chr2 (25-313)||(3672830-3673120)
chr2 (6-172)||(38796322-38796489)
chr2 (6-218)||(40679733-40679933)
chr2 (6-198)||(42514882-42515070)
chr2 (6-141)||(29676822-29676957)
chr2 (6-128)||(40733814-40733937)
chr2 (6-177)||(28531418-28531584)
chr2 (6-127)||(5542729-5542849)
chr2 (6-94)||(37106156-37106242)
chr2 (6-90)||(15880233-15880317)
chr2 (11-82)||(31468855-31468926)
chr2 (49-167)||(35580532-35580650)
chr2 (8-313)||(6421860-6422162)
chr2 (6-90)||(40733487-40733571)
chr2 (6-76)||(6421369-6421439)
chr2 (9-128)||(14745401-14745518)
chr2 (6-71)||(16542438-16542503)
chr2 (6-94)||(36178373-36178459)
chr2 (12-75)||(6421289-6421352)
chr2 (39-129)||(30323395-30323485)
chr2 (135-313)||(6421514-6421690)
chr2 (8-129)||(30313109-30313230)
chr2 (43-130)||(41678510-41678595)
chr2 (14-67)||(37632709-37632762)
chr2 (6-70)||(38796724-38796788)
chr2 (6-60)||(36178709-36178763)
chr2 (6-67)||(962591-962652)
chr2 (6-63)||(1769889-1769946)
chr2 (6-67)||(42514642-42514703)
chr2 (6-70)||(31899530-31899594)
chr2 (39-107)||(40734231-40734299)
chr2 (230-313)||(35580670-35580753)
chr2 (6-65)||(35580827-35580886)
chr2 (226-313)||(37106053-37106140)
chr2 (6-60)||(5543102-5543156)
chr2 (6-72)||(6712964-6713030)
chr2 (7-69)||(12529133-12529195)
chr2 (6-60)||(14745771-14745825)
chr2 (6-60)||(37105924-37105978)
chr2 (6-60)||(41283579-41283633)
chr2 (9-70)||(28254344-28254405)
chr2 (8-70)||(15511601-15511661)
chr2 (6-67)||(5367448-5367509)
chr2 (9-94)||(29873644-29873728)
chr2 (6-70)||(36005984-36006047)
chr2 (9-67)||(16590881-16590940)
chr2 (6-70)||(33731636-33731702)
chr2 (190-313)||(36178513-36178634)
chr2 (16-105)||(37894806-37894892)
chr2 (25-70)||(3672709-3672754)
chr2 (6-63)||(7598225-7598282)
chr2 (137-313)||(23346365-23346541)
chr2 (230-303)||(29676668-29676740)
chr2 (6-70)||(31259720-31259787)
chr2 (261-313)||(3673197-3673249)
chr2 (179-235)||(40734090-40734146)
chr2 (28-67)||(33954387-33954426)
chr2 (6-49)||(40163477-40163520)
chr2 (230-313)||(42514778-42514860)
chr2 (6-68)||(37895165-37895227)
chr2 (52-93)||(38796529-38796570)
chr2 (8-52)||(29676543-29676587)
chr2 (65-109)||(34481599-34481643)
chr2 (6-42)||(36178275-36178311)
chr2 (28-68)||(43443108-43443148)
[»] chr1 (73 HSPs)
chr1 (6-313)||(41157120-41157429)
chr1 (6-169)||(34364816-34364979)
chr1 (9-270)||(37555900-37556163)
chr1 (28-313)||(22077248-22077524)
chr1 (6-128)||(26661626-26661749)
chr1 (6-131)||(3537251-3537375)
chr1 (6-142)||(22077599-22077731)
chr1 (9-128)||(44290565-44290683)
chr1 (6-128)||(48588592-48588713)
chr1 (6-270)||(66191-66458)
chr1 (77-264)||(41184198-41184386)
chr1 (113-313)||(34649567-34649767)
chr1 (8-128)||(50469187-50469303)
chr1 (6-89)||(11977251-11977334)
chr1 (6-69)||(40082398-40082461)
chr1 (6-71)||(34364496-34364561)
chr1 (8-68)||(17294569-17294629)
chr1 (6-70)||(29798189-29798253)
chr1 (6-70)||(34649428-34649492)
chr1 (6-70)||(41142362-41142426)
chr1 (14-142)||(30630750-30630875)
chr1 (179-313)||(34364636-34364770)
chr1 (8-70)||(41184531-41184593)
chr1 (28-128)||(50051777-50051876)
chr1 (13-70)||(35154150-35154207)
chr1 (6-70)||(31767265-31767329)
chr1 (6-70)||(37850704-37850768)
chr1 (6-70)||(41156981-41157045)
chr1 (179-313)||(44290720-44290853)
chr1 (6-60)||(32594820-32594874)
chr1 (6-60)||(44290929-44290983)
chr1 (6-64)||(45084378-45084436)
chr1 (6-71)||(39066304-39066369)
chr1 (6-70)||(26662002-26662066)
chr1 (6-68)||(66576-66638)
chr1 (9-67)||(24600421-24600479)
chr1 (8-142)||(47379891-47380021)
chr1 (65-158)||(1188391-1188482)
chr1 (6-59)||(3550721-3550774)
chr1 (8-68)||(38804461-38804521)
chr1 (9-57)||(50052130-50052178)
chr1 (11-70)||(21378150-21378209)
chr1 (1-55)||(3537698-3537752)
chr1 (6-68)||(3875435-3875497)
chr1 (6-68)||(5320069-5320131)
chr1 (6-60)||(41759483-41759537)
chr1 (7-60)||(45494083-45494137)
chr1 (42-108)||(47380258-47380323)
chr1 (6-67)||(24132089-24132150)
chr1 (14-67)||(44685449-44685502)
chr1 (6-68)||(5575098-5575158)
chr1 (179-313)||(50051921-50052053)
chr1 (8-54)||(4266888-4266934)
chr1 (9-67)||(4878796-4878854)
chr1 (207-313)||(22077752-22077858)
chr1 (41-129)||(24448211-24448296)
chr1 (11-69)||(37555721-37555779)
chr1 (9-50)||(5528861-5528902)
chr1 (8-68)||(9955899-9955960)
chr1 (11-68)||(22793270-22793327)
chr1 (9-65)||(22077935-22077991)
chr1 (77-131)||(3537495-3537550)
chr1 (179-310)||(11977076-11977208)
chr1 (28-67)||(19283581-19283620)
chr1 (11-70)||(45839617-45839675)
chr1 (6-52)||(14318875-14318921)
chr1 (6-60)||(32168796-32168845)
chr1 (284-313)||(4266798-4266827)
chr1 (179-255)||(48588758-48588832)
chr1 (11-67)||(1188697-1188753)
chr1 (25-65)||(4208136-4208176)
chr1 (285-313)||(41157504-41157532)
chr1 (178-261)||(48588382-48588463)
[»] scaffold0171 (1 HSPs)
scaffold0171 (6-111)||(17560-17665)
[»] scaffold0078 (3 HSPs)
scaffold0078 (6-128)||(5288-5411)
scaffold0078 (179-271)||(5154-5243)
scaffold0078 (14-70)||(4972-5028)
[»] scaffold0702 (3 HSPs)
scaffold0702 (6-128)||(246-366)
scaffold0702 (6-70)||(618-682)
scaffold0702 (211-309)||(441-539)
[»] scaffold0113 (1 HSPs)
scaffold0113 (28-129)||(39770-39870)
[»] scaffold0504 (1 HSPs)
scaffold0504 (6-70)||(10215-10279)
[»] scaffold0027 (1 HSPs)
scaffold0027 (6-70)||(47350-47414)


Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 6 - 313
Target Start/End: Original strand, 54017920 - 54018227
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  54017920 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaatactccccctcaagtgtgagtccatcttttcatcatg 54018019  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcgc 205  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  54018020 ttccccctcaagcggaagctctttacttgcttgtatcactgttgttggtttctccgcaaacggactgacacgtttgtaccgccattgctgctttctgcgc 54018119  T
Q  206 aaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggct 305  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  54018120 aaacggaccggctgcctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtaggagtcagggggaccgcccacatcgaggct 54018219  T
Q  306 agaacaac 313  Q
    ||||||||    
T  54018220 agaacaac 54018227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 6 - 313
Target Start/End: Original strand, 3135177 - 3135483
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaac-aacactccccctcaagtgtgagtccatcttttcatcat 104  Q
    ||||||||||| |||||| ||||||||||||| ||||||||||||  |||||| ||||||| ||||||| || |||||||||||| ||||  |||||| |    
T  3135177 aggtgttcaacatttactattttatccgatgtgggacatataact--cacttgtacacaacaaacactcaccatcaagtgtgagt-catcaattcatcgt 3135273  T
Q  105 gctcctcctcaagcggaag-ctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctg 202  Q
    ||||| |||| |||||||| | ||||||||| |||||||   |||| |||||||| ||||||| ||| |||||  |||||||||||||||||||||||||    
T  3135274 gctccccctctagcggaagccactttacttgtttgtatcgtcgttgctggtttctccgcaaacagaccgacactgtttgtaccgccgttgctgctttctg 3135373  T
Q  203 cgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgag 302  Q
    || |||||||||  || ||||| ||| |||||| || |||  || |||||||| |||| ||| |||||    | ||||||||||||||| ||||||||||    
T  3135374 cgtaaacggaccaactgcctcgttcgtaccctttgtcgaa-tggggctctgataccacagttgggtcatgaggagagtcagggggaccgtccacatcgag 3135472  T
Q  303 gctagaacaac 313  Q
    |||||||||||    
T  3135473 gctagaacaac 3135483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 15773243 - 15773094
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc 108  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||    
T  15773243 tgttcaacttttactcttttattcgatgtgggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcactttatcgtgctc 15773144  T
Q  109 ctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttct 158  Q
    | ||   |||||||||| |||||||||||||||| |||||| || |||||    
T  15773143 ccccaagagcggaagctttttacttgcttgtatcgctgttgctgctttct 15773094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 167
Target Start/End: Original strand, 37990743 - 37990903
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||| |||||| ||||||||||||| | |||||||||||||||||| |||||||||||||||||||||| ||||||||||||  |||||||||    
T  37990743 aggtgttcaacatttactattttatccgatgtggaacatataactcacacttgtacacaacaacactccccctcaactgtgagtccatcaattcatcatg 37990842  T
Q  106 ctcctcctcaagcggaagctctttac-ttgcttgtatcactgttgttggtttcttcgcaaacg 167  Q
    | || ||||||||||||||| ||||| |||| |||||| | |||| |||||||| ||||||||    
T  37990843 c-ccccctcaagcggaagct-tttactttgcatgtatcgccgttgctggtttctgcgcaaacg 37990903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 22304623 - 22304488
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||| |||||||||    
T  22304623 aggtattcaacctttactattttatccgatgtgggacatatagctcacacttgcaaac--caacactccccctcaagtgtgagtccatctattcatcatg 22304526  T
Q  106 ctcctcc-tcaagcggaagctctttacttgcttgtatc 142  Q
    |||| || ||||||||||||||||   |||||||||||    
T  22304525 ctcccccttcaagcggaagctcttactttgcttgtatc 22304488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 218
Target Start/End: Original strand, 21832447 - 21832650
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| || ||||| |||| |||||||||||||||||||||||   | |||||||| |||||||||||||||||||| |||||||||    
T  21832447 aggtgttcaacctttacttttctatccaatgtgggacatataactcacacttgcac---ataacactccgcctcaagtgtgagtccatctattcatcatg 21832543  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcgc 205  Q
    |||| | ||||  ||||||||  ||||||||||||||   |||| |||||||| ||| ||||||| |||||   ||||||| |||||||| ||||| |||    
T  21832544 ctccccatcaaatggaagctc-atacttgcttgtatcgtcgttgctggtttctccgc-aacggaccgacac---tgtaccgtcgttgctggtttctccgc 21832638  T
Q  206 aaacggaccggct 218  Q
     ||||||||||||    
T  21832639 -aacggaccggct 21832650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 32462662 - 32462786
Alignment:
Q  6 aggtgttcaaccttt-actcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcat 104  Q
    ||||||||||||||| ||||||| || |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||    
T  32462662 aggtgttcaaccttttactctttcattcgatgtgggacatataactcacacttgtacacaacaacactccccctcaagtgtgagtccatcaattcatcat 32462761  T
Q  105 gctcctcc-tcaagcggaagctctt 128  Q
    ||||| || ||||||| ||||||||    
T  32462762 gctcccccttcaagcgaaagctctt 32462786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 11662005 - 11661878
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||||||||||||||||||| |||| || ||| |||||||||||| || ||||||||||||||||  |||||||||||||||  || ||| ||    
T  11662005 aggtgttcaacctttactcttttatccaatgtggggcatttaactcacacttacatacaacaacactcccccaaaagtgtgagtccatcactttatcgtg 11661906  T
Q  106 ctcctcctcaagcggaagctctttactt 133  Q
    ||||||||  |||||||||| |||||||    
T  11661905 ctcctcctagagcggaagctttttactt 11661878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 42342206 - 42342296
Alignment:
Q  18 tttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc 108  Q
    |||||||||||||||||||| | |||||| | |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  42342206 tttactcttttatccgatgtggaacatatgaatcacacttgcacacaacaacactccccctcaagtgtgagtccatcaattcatcatgctc 42342296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 22304300 - 22304214
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  22304300 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac--caacactccccctcaagtgtgagtccatc 22304214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 41359869 - 41359992
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||| ||||||||||||| || |||||||||| |||    ||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  41359869 aggtattcaacctttactattgtatccgatgtggga----taactcacacttgcacacaacaacactcccccttaagtgtgagt-catctattcatcatg 41359963  T
Q  106 ctc-ctcctcaagcggaagctctttactt 133  Q
    ||| | | ||||| |||||||||||||||    
T  41359964 ctctcccttcaagtggaagctctttactt 41359992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 29644685 - 29644767
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacact-ccccctcaagtgtga 87  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| | |||||||||||||||    
T  29644685 aggtgttcaacctttactctttaatccgatgtgggacatataactcacacttgcacacaaaaacattcccccctcaagtgtga 29644767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 31190071 - 31190007
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  31190071 aggtgttcaacctttactcttttatccgatgtgggacatatcactcacacttgcacacaacaaca 31190007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 153 - 313
Target Start/End: Original strand, 41359632 - 41359794
Alignment:
Q  153 gtttcttcgcaaacggactgacaca--tttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagct 250  Q
    |||||| ||||||||||| |||||   |||||||||| ||||||||||| |||||| |||||| |||| ||||||||  ||||||||| |||  || |||    
T  41359632 gtttctccgcaaacggaccgacactgctttgtaccgctgttgctgctttatgcgcagacggactggctgcctcgatcttacccttcgtcgaa-tggggct 41359730  T
Q  251 ctgatgccactgtttggtcaccgtgggag-tcagggggaccgcccacatcgaggctagaacaac 313  Q
     |||| ||||| || |||||| | ||||| || |||||||||||||||||||||||||||||||    
T  41359731 atgataccactattgggtcactgggggagctcggggggaccgcccacatcgaggctagaacaac 41359794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 22304061 - 22304140
Alignment:
Q  15 acctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    ||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  22304061 acctttactattttatctgatgtgggacatataactcacacttgtacacaacaacattctccctcaagtgtgagtccatc 22304140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 29645006 - 29645070
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  29645006 aggtgtttaacctttactcttttatccgatgtgggacatataacttacacttgcacacaacaaca 29645070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 42342492 - 42342556
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  42342492 aggtgttgaacctttactcttttatcggatgtgggacatataactcacacttgcacacaacaaca 42342556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 43346704 - 43346640
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  43346704 aggtgttcaacctttactattttatccgatgtgggacatacaactcacacttgcacacaacaaca 43346640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 54018302 - 54018366
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  54018302 aggtgttcaatctttactcttttatccgatgcaggacatataactcacacttgcacataacaaca 54018366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 179 - 313
Target Start/End: Original strand, 22303850 - 22303984
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    |||||||| |||||||||||||||||||| | |||||||  ||||  ||||||||||||| ||||||| |||||||| |||||||| |||||| | ||||    
T  22303850 ttgtaccgtcgttgctgctttctgcgcaa-ctgaccggcggcctctgtcgcacccttcgtcgaaccggggctctgataccactgttaggtcactggggga 22303948  T
Q  279 gtc-agggggaccgcccacatcgaggctagaacaac 313  Q
    | |  |||||||   |||||||||||||||||||||    
T  22303949 gccttgggggacaatccacatcgaggctagaacaac 22303984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 39389124 - 39389070
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39389124 aggtgttcaacctttactattttatccgatgtaggacatataactcacacttgca 39389070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 25739532 - 25739593
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  25739532 tgttcaacttttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 25739593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 35946576 - 35946515
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  35946576 aggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgtacacaaca 35946515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 43346895 - 43346960
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacac 71  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  43346895 aggtgttcaacctttactattttatctgatgtgggacatataactcacacttgtacacaacaacac 43346960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 53577415 - 53577354
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  53577415 tgttcaacctttactgttttatccgatgtgtgacatataactcacacttgcacacaacaaca 53577354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 8327953 - 8327897
Alignment:
Q  11 ttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8327953 ttcatcctttactcttttatccgatgtgggacatataactcacacttgcacacaaca 8327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 174
Target Start/End: Complemental strand, 9240203 - 9240038
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||| | ||||||  | |||||||||| | |||||||||||||||||||||||   |||||||| |||||||||||||||||||  ||| | |||    
T  9240203 aggtgttcagcttttacttctctatccgatgtggaacatataactcacacttgcacac---aacactcctcctcaagtgtgagtccatccattcgttatg 9240107  T
Q  106 ctc-ctcctcaagcggaagctctttacttgc-ttgtatcactgttgttggtttcttcgcaaacggactgac 174  Q
    ||| | |||||||||||| ||| |||||||| ||||||||  |||| || ||||| ||| |||||||||||    
T  9240106 ctctcccctcaagcggaaactc-ttacttgctttgtatcatcgttgctgctttctgcgc-aacggactgac 9240038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 15772908 - 15772844
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| ||||||    
T  15772908 aggtgttcaacatttactcttttatccgatatgggacatataactcacacttgcacacgacaaca 15772844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 313
Target Start/End: Original strand, 33803099 - 33803281
Alignment:
Q  131 cttgcttgtatcactgttgttggtttcttcgcaaacggactgacacat-ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgc 229  Q
    |||||||||||| | |||| ||| |||| ||||| ||||| |||||   |||||| | |||||||||||| ||||||||||||| |||| ||||  |||     
T  33803099 cttgcttgtatcgccgttgctggcttctccgcaa-cggaccgacactgcttgtactgtcgttgctgctttatgcgcaaacggactggctgcctcagtcgt 33803197  T
Q  230 acccttcgttgaaccggagctctgatgccactgtttggtcaccg-tgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    ||||||||| ||| ||  |||||||| |||||| |||||||  | |||||||  ||||||||| |||||||||||||||||||||    
T  33803198 acccttcgtcgaatcgaggctctgataccactg-ttggtcattgatgggagtttgggggaccgtccacatcgaggctagaacaac 33803281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 33803357 - 33803417
Alignment:
Q  7 ggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  33803357 ggtgttcaacctttactattttatccgatgtgggacatataactcacaattgcacacaaca 33803417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 52634726 - 52634666
Alignment:
Q  10 gttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||    
T  52634726 gttcaacctttactgttttatccgatgtgggacatataactcacacttgtacacaacaaca 52634666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 53118078 - 53118142
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||| | | ||||||||||||||||||| ||||||||||    
T  53118078 aggtgttcaacctttactcttttatccgatatggaacatataactcacacttgcccacaacaaca 53118142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 8328222 - 8328117
Alignment:
Q  113 tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcgcaaacgg 211  Q
    |||||||||||||||| ||||||||||||| | |||| |||||||| ||||||||||| |||||   ||||| |||||||| |||| |||||||||||||    
T  8328222 tcaagcggaagctctt-acttgcttgtatcgccgttgctggtttctccgcaaacggaccgacactgcttgtatcgccgttgttgctctctgcgcaaacgg 8328124  T
Q  212 accggct 218  Q
    | |||||    
T  8328123 atcggct 8328117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 4823709 - 4823623
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    ||||||| ||| |||||| |||||||||||||  ||| ||||||||||||||||| ||  ||||||||||| |||||||||||||||||    
T  4823709 aggtgtttaacttttactattttatccgatgtgagacttataactcacacttgcaaac--caacactccccttcaagtgtgagtccatc 4823623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 25755448 - 25755383
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacac 71  Q
    |||| ||||||||||||||||||||| |||||  ||||||||||||||||||| ||||||||||||    
T  25755448 aggtattcaacctttactcttttatctgatgtgagacatataactcacacttgtacacaacaacac 25755383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 37991081 - 37991146
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacac 71  Q
    |||||||||||||||||| |||||||| ||||  ||||||||||||||||||| ||||||||||||    
T  37991081 aggtgttcaacctttactattttatccaatgtgagacatataactcacacttgtacacaacaacac 37991146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 39935059 - 39935104
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactc 51  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39935059 aggtgttcaacctttactcttttatccgatgtaggacatataactc 39935104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 3135565 - 3135629
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||||||||||| || || |||||||||||||||||||| |||||||||||    
T  3135565 aggtgttcaacttttactcttttatctgaggtgggacatataactcacacttgtacacaacaaca 3135629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 215
Target Start/End: Complemental strand, 8328368 - 8328225
Alignment:
Q  73 ccccctcaagtgtgagtccatcttttcatcatgctcctcct-caagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggact 171  Q
    ||||||||||||||||||||||  | ||||   |||| ||| ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| ||      
T  8328368 ccccctcaagtgtgagtccatcaatgcatcgatctcccccttcaagcggaagctctt-acttgcttgtatcaccgttgttggtttctccgcaaactgatc 8328270  T
Q  172 gacac-atttgtaccgccgttgctgctttctgcgcaaacggaccg 215  Q
    |||||   ||||| ||||||||||  ||||| | |||||||||||    
T  8328269 gacactgcttgtatcgccgttgctagtttctccacaaacggaccg 8328225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 12114666 - 12114730
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| || |||||||||| ||| |||||||| |||||||||||||||||||    
T  12114666 aggtgttcaacctttacttttctatccgatgtgggatatataacttacacttgcacacaacaaca 12114730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 39914306 - 39914242
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||| |||| ||||||| |||||  |||||||||||||||||||||||||||||||    
T  39914306 aggtgttcaacctctactgttttatctgatgtgagacatataactcacacttgcacacaacaaca 39914242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 32463004 - 32463070
Alignment:
Q  6 aggtgttcaaccttt-actcttttatccgatgtaggacatataactcacacttgcacacaacaacac 71  Q
    |||| |||||||||| |||||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  32463004 aggtattcaaccttttactcttctatccgatgtgggacatataactcacacttgtacacaacaacac 32463070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 313
Target Start/End: Original strand, 37990873 - 37991006
Alignment:
Q  180 tgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtca-ccgtggga 278  Q
    |||| ||||||||||| |||||||||||||| ||||||| ||||||||| |||||| || |||  || || ||||| |||||||| |||||   | ||||    
T  37990873 tgtatcgccgttgctggtttctgcgcaaacgaaccggctgcctcgatcgtaccctttgtcgaa-tggggccctgataccactgttgggtcatgaggggga 37990971  T
Q  279 gtcagggggaccgcccacatcgaggctagaacaac 313  Q
    | | | ||||||| |||||||||||||||||||||    
T  37990972 gcctgagggaccgtccacatcgaggctagaacaac 37991006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 45901768 - 45901702
Alignment:
Q  6 aggtgttcaacctttact-cttttatccgatgtaggacatataactcacacttgcacacaacaacac 71  Q
    |||||||||||||||  | |||||||||||||| |||||||||||||||||||| ||||||||||||    
T  45901768 aggtgttcaacctttttttcttttatccgatgtgggacatataactcacacttgtacacaacaacac 45901702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 50612556 - 50612610
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  50612556 aggtgttcaatctttactattttatccgatgtgggacatataactcacacttgca 50612610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 54017780 - 54017845
Alignment:
Q  248 gctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |||||||| |||||||| |||||| | ||||| ||||||||||||||||||||| |||||||||||    
T  54017780 gctctgataccactgttgggtcactgggggagccagggggaccgcccacatcgaagctagaacaac 54017845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 2299997 - 2299930
Alignment:
Q  39 ggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||  || ||||||||    
T  2299997 ggacatataacccacacttgcacacaacaata-tccccctcaagtgtgagtccatcaatttatcatgct 2299930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 45395759 - 45395819
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    ||||| ||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||    
T  45395759 gtgtttaacctttactcttttattcgatgtgggatatataacttacacttgcacacaacaa 45395819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 264
Target Start/End: Original strand, 32462794 - 32462879
Alignment:
Q  178 tttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtt 264  Q
    ||||||||||||||||||||||||||||||||| |||| || |  || ||| ||||||||| ||||  | |||||||||||||||||    
T  32462794 tttgtaccgccgttgctgctttctgcgcaaacgaaccgactgctccggtcgtacccttcgtcgaactag-gctctgatgccactgtt 32462879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 11661586 - 11661525
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||| |||| ||||| ||||||||||||| |||||||||||||||||||| ||||| |||||    
T  11661586 tgtttaaccgttactattttatccgatgtgggacatataactcacacttgtacacaccaaca 11661525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 25739330 - 25739375
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcg 224  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||    
T  25739330 ttgtaccgccgttgttgctttctgcgcaaacggaccggctgcctcg 25739375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 33175768 - 33175829
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| || |||| |||||  ||||||||||||||||||| ||||||||    
T  33175768 aggtgttcaacctttacttttctatctgatgtgagacatataactcacacttgtacacaaca 33175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 12747878 - 12747918
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  12747878 tatccgatgtgggacatataactcacacttgcacacaacaa 12747918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 32589757 - 32589694
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||| | |||||||  |||| ||||||||| ||||||||||||||||||||||    
T  32589757 aggtgttcaacctttattattttatcttatgtgggacatata-ctcacacttgcacacaacaaca 32589694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 49336791 - 49336855
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||| |||||||||||| || ||||||||||  ||||| ||||||||||||| |||||||||||    
T  49336791 aggtggtcaacctttacttttctatccgatgtgagacatgtaactcacacttgtacacaacaaca 49336855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 53577616 - 53577493
Alignment:
Q  190 ttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtg-ggagtcaggggga 288  Q
    |||||||||||||||| ||| |||||||  ||||| ||| ||||||||| |||||||  ||||||| |||||||| ||||||   | |||||  ||||||    
T  53577616 ttgctgctttctgcgc-aactgaccggcggcctcggtcgtacccttcgtcgaaccgggactctgataccactgttgggtcacaaagaggagttcggggga 53577518  T
Q  289 ccgcccacatcgaggctagaacaac 313  Q
    ||  ||||| |||||||||||||||    
T  53577517 ccatccacaccgaggctagaacaac 53577493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 51886612 - 51886561
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    ||||||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  51886612 tgttcaacctttactattttattcgatgtgagacatataactcacacttgca 51886561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 1634441 - 1634483
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||| |||||||||||||||||||||||||| |||||    
T  1634441 tatccgatgtgggacatataactcacacttgcacacagcaaca 1634483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 15773116 - 15772983
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    ||||| ||| |||||||||||||||  || | |||||||  ||||||||| ||||||||| ||| | | |||||||| |||||||| |||||    ||||    
T  15773116 ttgtatcgctgttgctgctttctgcataa-ctgaccggcggcctcgatcgtacccttcgtcgaatcagggctctgataccactgttgggtcatgagggga 15773018  T
Q  279 gtcagggggaccgcccacatcgaggctagaacaac 313  Q
    ||||   |||||| ||||||||||| |||||||||    
T  15773017 gtcaaaaggaccgtccacatcgaggttagaacaac 15772983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 37726558 - 37726504
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||| |||||| |||||| |||||||||||||  |||||||||||||||||||||    
T  37726558 aggtattcaacatttactattttatccgatgtgagacatataactcacacttgca 37726504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 309
Target Start/End: Complemental strand, 9240066 - 9239946
Alignment:
Q  188 cgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcaggggg 287  Q
    |||||||||||||||||| ||||||| | || ||||||||| |||||| |||||||||  | |||||| | |||||| | |||    |||||   |||||    
T  9240066 cgttgctgctttctgcgc-aacggactgactgcctcgatcgtaccctttgttgaaccgaggttctgatactactgttggatcatgaggggagcttggggg 9239968  T
Q  288 accgcccacatcgaggctagaa 309  Q
    |||| |||||||||||||||||    
T  9239967 accgtccacatcgaggctagaa 9239946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 39336355 - 39336392
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaa 65  Q
    |||||||||| |||||||||||||||||||||||||||    
T  39336355 tatccgatgtgggacatataactcacacttgcacacaa 39336392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 7767420 - 7767476
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacaca 64  Q
    |||| ||||||||||| || |||||||||| |||||||||||||| |||| ||||||    
T  7767420 gtgtccaacctttacttttctatccgatgtgggacatataactcagacttacacaca 7767476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 33809134 - 33809213
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc 108  Q
    |||| ||||| |||||||||||| |||||||||||||||||   || | || |||||||||||||||  ||||||||||||    
T  33809134 tatctgatgtgggacatataacttacacttgcacacaacaa-tttctctctgaagtgtgagtccatcaattcatcatgctc 33809213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 42584926 - 42584970
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataact 50  Q
    |||||||||| |||||||||| |||||||||| ||||||||||||    
T  42584926 aggtgttcaatctttactcttctatccgatgtgggacatataact 42584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 47965041 - 47965080
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  47965041 tatccgatgtaaaacatataactcacacttgcacacaaca 47965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 46546452 - 46546490
Alignment:
Q  29 atccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  46546452 atccaatgtaggacatataactcacacttacacacaaca 46546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 42342067 - 42342119
Alignment:
Q  261 tgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |||| |||||||| ||||||  || |||||| |||||||||||||||||||||    
T  42342067 tgttgggtcaccgagggagttcggaggaccgtccacatcgaggctagaacaac 42342119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 3e-79; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 6 - 313
Target Start/End: Complemental strand, 16108117 - 16107807
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||| |||||||||||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  16108117 aggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaacaacactccccctcaagtgtgagtccatcaattcatcatg 16108018  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac--atttgtaccgccgttgctgctttctgc 203  Q
    |||| | |||||||||||||| |||||| |||| ||| | |||| |||||||||||||||| ||| |||||   ||||||||||||||||||||||||||    
T  16108017 ctccccttcaagcggaagctc-ttactttcttgcatcgccgttgctggtttcttcgcaaacagaccgacactgctttgtaccgccgttgctgctttctgc 16107919  T
Q  204 gcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccg--tgggagtcagggggaccgcccacatcga 301  Q
     |||| ||||||||| ||||| ||  ||||||||| ||||||| |||||||| |||||||| |||||| |   |||||| ||||| ||| ||||||||||    
T  16107918 acaaatggaccggctgcctcggtcatacccttcgtcgaaccggggctctgataccactgttgggtcactgaaggggagttaggggtaccacccacatcga 16107819  T
Q  302 ggctagaacaac 313  Q
    ||||||| ||||    
T  16107818 ggctagagcaac 16107807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 6 - 264
Target Start/End: Original strand, 2579209 - 2579472
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||| |||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  2579209 aggtgttcaacttttactcttttatccgatgtgggacatataactaacacttgtacacaacaacactccccctcaagtgtgagtccatctattcatcatg 2579308  T
Q  106 ctcctcc----tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac--atttgtaccgccgttgctgcttt 199  Q
     | ||||    |||||||||||||| ||||||| ||||||| | |||| ||||||||  |||||| ||| |||||   ||||||||||||||||||||||    
T  2579309 ttgctcccctttcaagcggaagctc-ttacttgtttgtatcgccgttgctggtttctctgcaaacagaccgacaccgctttgtaccgccgttgctgcttt 2579407  T
Q  200 ctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtt 264  Q
    ||||||||  ||||||||| ||||| ||| ||| ||||| ||||||| |||||||| ||||||||    
T  2579408 ctgcgcaagtggaccggctgcctcggtcgtaccgttcgtcgaaccggggctctgataccactgtt 2579472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 8 - 313
Target Start/End: Original strand, 2578549 - 2578864
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  2578549 gtgttcaacctttactcttttatccg-tgtgggacatataactcacacttgtacacaacaacactccccctcaagtgtgagtccatctattcatcatgct 2578647  T
Q  108 cctcc----tcaagcggaagc----tct-ttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac--atttgtaccgccgttgctgc 196  Q
     ||||    ||||||||||||     || ||||||||||||||| | ||||||||||||| ||||||| ||| |||||   |||||| ||||||||||||    
T  2578648 gctcccttttcaagcggaagcggaagctcttacttgcttgtatcgccgttgttggtttctccgcaaacagaccgacactgctttgtaacgccgttgctgc 2578747  T
Q  197 tttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccac 296  Q
    ||||||| ||| |||||||||| ||||| ||| ||||||||| ||||||| |||||||| ||||||||   |||    ||||| | ||||||||| ||||    
T  2578748 tttctgcccaagcggaccggctgcctcggtcgtacccttcgtcgaaccggggctctgataccactgttgattcatgaggggagcctgggggaccgtccac 2578847  T
Q  297 atcgaggctagaacaac 313  Q
    |||||||  ||||||||    
T  2578848 atcgaggtcagaacaac 2578864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 15 - 313
Target Start/End: Original strand, 2579605 - 2579901
Alignment:
Q  15 acctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcctcct- 113  Q
    ||||||||| |||| |||||||| ||||||||||||||||| |||    |||||||||| ||||||||||||||||| ||| ||||||||| ||| |||     
T  2579605 acctttacttttttgtccgatgtgggacatataactcacacctgct---aacaacactctccctcaagtgtgagtccgtctattcatcatggtccccctt 2579701  T
Q  114 caagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacat-ttgtaccgccgttgctgctttctgcgcaaacgga 212  Q
    |||||| ||||||||   ||| ||||||| ||||||||||||||| |||||| |||| | ||| | |||||||||  ||||||||||||||||||||| |    
T  2579702 caagcgaaagctcttactttgtttgtatctctgttgttggtttctccgcaaatggaccgtcacttattgtaccgcaattgctgctttctgcgcaaacgaa 2579801  T
Q  213 ccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaa 312  Q
    | |||| ||||| ||| ||||||||| ||||||| |||||||| |||||||| ||| |    ||||| |  |||||||  ||||||||||||||||||||    
T  2579802 ctggctgcctcggtcgtacccttcgtggaaccggggctctgataccactgttgggtaatgaggggag-cttggggaccttccacatcgaggctagaacaa 2579900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 6 - 270
Target Start/End: Original strand, 10073720 - 10073977
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||||||||||  ||| |||||||| |||||||||||| |||||||||||||||| |   ||| || |||||||||||||||  |||||||||    
T  10073720 aggtgttcaacctttact--tttctccgatgtgggacatataactaacacttgcacacaacacc---ccctcttaagtgtgagtccatcaattcatcatg 10073814  T
Q  106 ctcctcct-caagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcg 204  Q
     ||| ||| |||||||||| |||| |||| ||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||  |||||| |||||| ||    
T  10073815 ttcccccttcaagcggaaggtctt-actttcttgtatcactgttgatggtttctccgcaa-cggaccgacacgtttgtaccgt-gttgctactttctacg 10073911  T
Q  205 caaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtca 270  Q
    |||||||||||||| ||||| ||| ||| ||||||||||||| | |||||| ||| |||| |||||    
T  10073912 caaacggaccggctgcctcggtcgtacctttcgttgaaccggggatctgataccattgttgggtca 10073977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 176
Target Start/End: Complemental strand, 29518974 - 29518806
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||  |||||| ||    
T  29518974 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac--caacactccccctcaagtgtgagtccatcaattcatcgtg 29518877  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac 176  Q
    |||| ||||||||||||||||||   |||| ||| || | |||| |||||||| | ||||||||| |||||    
T  29518876 ctccccctcaagcggaagctcttactttgcatgtgtctccgttgctggtttctccacaaacggaccgacac 29518806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 16454961 - 16454837
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||||||| ||| |||||||||||||||||||||| ||||| ||||||  |||| ||||    
T  16454961 aggtgttcaacctttactcttttatctgatgtgggacacataactcacatttgtacacaacaacactccccctcaactgtgactccatcaattcagcatg 16454862  T
Q  106 ctcctcc-tcaagcggaagctcttt 129  Q
    |||| || |||||||||||||||||    
T  16454861 ctcccccttcaagcggaagctcttt 16454837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 2378180 - 2378060
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||  |||||||||||| ||| ||||||||||| | |||||||||    
T  2378180 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac--caacactccccc-caaatgtgagtccatttattcatcatg 2378084  T
Q  106 ctcctcc-tcaagcggaagctctt 128  Q
    |||| || ||||||||||||||||    
T  2378083 ctcccccttcaagcggaagctctt 2378060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 152
Target Start/End: Original strand, 10074095 - 10074238
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||| |||||| || |||||||||| ||| ||||||||||| |||||||   |||||||||||||||||||| ||||| |||  |||||||||    
T  10074095 aggtgttcaacgtttacttttctatccgatgtgggatatataactcacccttgcac---acaacactccccctcaagtgcgagtctatcaattcatcatg 10074191  T
Q  106 ctcctcc-tcaagcggaagctctttacttgcttgtatcactgttgttg 152  Q
    |||| || |||||||||||||| ||||||||||||||| | |||||||    
T  10074192 ctcccccttcaagcggaagctc-ttacttgcttgtatcgccgttgttg 10074238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 178 - 313
Target Start/End: Complemental strand, 16454839 - 16454704
Alignment:
Q  178 tttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggg 277  Q
    ||||||||| ||||| ||||||||||||||||||||||| | ||||| ||| ||||||||| ||||| | |||||||| |||||||| ||||||   |||    
T  16454839 tttgtaccgtcgttgttgctttctgcgcaaacggaccggttacctcggtcgtacccttcgtcgaacctgggctctgataccactgttgggtcacgagggg 16454740  T
Q  278 agtcagggggaccgcccacatcgaggctagaacaac 313  Q
    ||   ||||||||| |||||||||||||||||||||    
T  16454739 agctcgggggaccgtccacatcgaggctagaacaac 16454704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 2579978 - 2580040
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2579978 gtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaacaaca 2580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 3409711 - 3409628
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    |||||||| |||||| ||||||| ||||| | |||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  3409711 tgttcaacttttactattttatctgatgtggtacatataactcacacttgcaaac--caacactccccctcaagtgtgagtccatc 3409628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 10074467 - 10074552
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    |||||||||||||||||| || |||||||||| |||| | ||||||||||||||||   |||||||||||||| |||||||||||||||    
T  10074467 aggtgttcaacctttacttttctatccgatgtgggacctctaactcacacttgcac---acaacactcccccttaagtgtgagtccatc 10074552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 593813 - 593877
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || |||||    
T  593813 aggtgttcaacctttactcttttatccgatgtgggacatacaactcacacttgcactcagcaaca 593877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 1950289 - 1950353
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||  || ||||||||    
T  1950289 aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttatacgcaacaaca 1950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 2377808 - 2377744
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  2377808 aggtgttcaacctttactcttttaaccgatgtgggacatataactcacacttgtgcacaacaaca 2377744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 6071184 - 6071063
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    |||||||||||  ||| || ||| | |||| ||||||||||||||||||||||||||||||  || |||||||| ||||||||||||  |||||||||||    
T  6071184 gtgttcaacctccacttttctattcaatgtgggacatataactcacacttgcacacaacaa-tcttcccctcaaatgtgagtccatcaattcatcatgct 6071086  T
Q  108 c-ctcctcaagcggaagctcttt 129  Q
    | | ||| || ||||||||||||    
T  6071085 caccccttaaacggaagctcttt 6071063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 8481978 - 8481894
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    |||||||||||  ||| || |||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  8481978 gtgttcaacctccacttttatatctgatgt-ggacatataactcacacttgcacacaacaa-tctccccctcaagtgtgagtccatc 8481894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 14748442 - 14748496
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  14748442 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 14748496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 29518557 - 29518503
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  29518557 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 29518503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 32741233 - 32741179
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  32741233 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 32741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 164
Target Start/End: Complemental strand, 33606027 - 33605875
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    |||||||||||  ||| || ||| |||||| |||||||||||| ||| ||||||||| ||   ||||||||||||||||||||||||  |||| | |||     
T  33606027 gtgttcaacctccacttttctattcgatgtgggacatataacttacatttgcacacatca---ctccccctcaagtgtgagtccatcaattcaccgtgcc 33605931  T
Q  108 cctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaa 164  Q
    | || || ||||||||||| |||||||||||||||   |||| |||||||| |||||    
T  33605930 cttcttcgagcggaagctc-ttacttgcttgtatcgtcgttgctggtttctccgcaa 33605875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 5832130 - 5832194
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| |||||||  ||||||||||    
T  5832130 aggtgttcaacctttactcttttatccaatgtgggacatataacttacacttgtgcacaacaaca 5832194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 5958707 - 5958771
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||| |||||||| ||||||    
T  5958707 aggtgttcaacctttactgttttatccgatgtaacacatataactcacaattgcacaccacaaca 5958771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 6999900 - 6999964
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||  |||||| ||||    
T  6999900 aggtgttcaacttttacttttttatccgatgtaggacatataactcacacttatacacaataaca 6999964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 26544101 - 26544049
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  26544101 gtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 26544049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 3058280 - 3058226
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  3058280 aggtgttcaacctttactattttatccgatgtgggacatataactaacacttgca 3058226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 3409313 - 3409259
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  3409313 aggtgttcaacctttactattttatctgatgtgggacatataactcacacttgca 3409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 10911620 - 10911558
Alignment:
Q  6 aggtgttcaacctttactctttt-atccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||||||||||||| ||||||    
T  10911620 aggtgttcaacctttactttttttatctgatgtaggacatataactcacacttgcatacaaca 10911558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 29518765 - 29518632
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    |||||||| |||||||||||||||||||| |  ||||||   |||| ||||||||||||| ||||||| |||||||| |||||||| ||| |     |||    
T  29518765 ttgtaccgtcgttgctgctttctgcgcaa-ctaaccggcggtctcggtcgcacccttcgtcgaaccggggctctgataccactgttgggttatgagagga 29518667  T
Q  279 gtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |   ||||||||| |||||||||||||||||||||    
T  29518666 gcgcgggggaccgtccacatcgaggctagaacaac 29518632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 35210258 - 35210204
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  35210258 aggtgttcaacctttactattttatccgatgtgagacatataactcacacttgca 35210204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 16107732 - 16107668
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||| |||||||||| |||||||||||||   |||||||||||||||||| |||||||||||    
T  16107732 aggtgtttaacctttacttttttatccgatgtgacacatataactcacacttgtacacaacaaca 16107668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 16454629 - 16454565
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||| ||||||||| ||||| ||||| |||||||||||||| |||||||||||    
T  16454629 aggtgttcaacttttattcttttatctgatgtgggacacataactcacacttgtacacaacaaca 16454565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 32460684 - 32460750
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacact 72  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||||||| |   ||||||||||||    
T  32460684 aggtgttcaacctttactattttatacgatgtgggacatataactcacacctttgcacaacaacact 32460750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 9062456 - 9062501
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcaca 54  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  9062456 tgttcaacctttactattttatccgatgtgggacatataactcaca 9062501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 2578939 - 2579016
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtga 87  Q
    |||| |||||| |||||| ||||||||||||  |||||||||| |||||||||| |   |||||||||||||||||||||||    
T  2578939 aggtattcaacatttact-ttttatccgatgagggacatataaatcacacttgctc---acaacactccccctcaagtgtga 2579016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 1127414 - 1127360
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||| ||||||| ||| |||||||||||| |||||    
T  1127414 aggtgttcaacctttactattttacccgatgtgggatatataactcacagttgca 1127360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 1846802 - 1846748
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| |||||||||||||  |||||| || |||||||||||    
T  1846802 aggtgttcaacctttactattttatccgatgtgagacatagaattcacacttgca 1846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 309
Target Start/End: Complemental strand, 2377985 - 2377887
Alignment:
Q  211 gaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaa 309  Q
    ||||| || ||||| | ||||||||||| ||||||| |||||||| |||||||| |||||| | || ||   ||||||||  |||||||||||||||||    
T  2377985 gaccgactacctcggttgcacccttcgtcgaaccggggctctgataccactgttgggtcactggggaagctcgggggaccttccacatcgaggctagaa 2377887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 313
Target Start/End: Original strand, 10074259 - 10074392
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    |||||||| ||||||| |||||||||| ||| |||||||  ||||| ||| ||||||| | ||||||| |||||||| | |  ||| ||||||   ||||    
T  10074259 ttgtaccgtcgttgctactttctgcgc-aactgaccggcggcctcggtcgtacccttcttcgaaccggggctctgatacaagagttgggtcacaagggga 10074357  T
Q  279 gtcagggggaccgcccacatcgaggctagaacaac 313  Q
    | | |||||||   |||||||||||||||||||||    
T  10074358 gcctgggggactatccacatcgaggctagaacaac 10074392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 35210434 - 35210333
Alignment:
Q  211 gaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaac 310  Q
    |||||||| | ||| ||| ||||||||| ||||||  ||| |||| |||||||| |||||| | ||||| |||||| |||| |||||||||||||||| |    
T  35210434 gaccggctacttcggtcgtacccttcgtcgaaccgaggctttgataccactgttgggtcactgggggagccagggg-accgtccacatcgaggctagagc 35210336  T
Q  311 aac 313  Q
    |||    
T  35210335 aac 35210333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 3415511 - 3415462
Alignment:
Q  7 ggtgttcaacctttactcttttatccgatgtaggacatataactcacact 56  Q
    ||||||||||||||||| ||||||  ||||| ||||||||||||||||||    
T  3415511 ggtgttcaacctttactattttatgtgatgtgggacatataactcacact 3415462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 7588355 - 7588390
Alignment:
Q  33 gatgtaggacatataactcacacttgcacacaacaa 68  Q
    ||||| ||||||||||||||||||||||||||||||    
T  7588355 gatgtgggacatataactcacacttgcacacaacaa 7588390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 12092201 - 12092262
Alignment:
Q  71 ctccccctcaagtgtgagtccatcttttcatcatgct---cctcctcaagcggaagctcttt 129  Q
    ||||||||||||||||||||||||  |||||||||||   || |||| ||||||||||||||    
T  12092201 ctccccctcaagtgtgagtccatcaattcatcatgctcacccccctctagcggaagctcttt 12092262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 313
Target Start/End: Complemental strand, 2843722 - 2843684
Alignment:
Q  275 gggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  2843722 gggagttagggggaccgtccacatcgaggctagaacaac 2843684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 2975549 - 2975473
Alignment:
Q  65 acaacactccccctcaagtgtgagtccatcttttcatcatgctcctcc-tcaagcggaagctctttacttgcttgtatc 142  Q
    ||||||||||||| ||||||||||| ||||| ||||||||| ||| || | |||||||||||| ||||||||| |||||    
T  2975549 acaacactccccc-caagtgtgagtgcatctattcatcatgttccccctttaagcggaagctc-ttacttgctcgtatc 2975473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 2843608 - 2843544
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||| | |||||||||||||   |||||||||||||| |||  ||||||||||    
T  2843608 aggtgttcaacttttattattttatccgatgtgaaacatataactcacaattgtgcacaacaaca 2843544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 33605706 - 33605646
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||||||||||  ||| || |||| |||||  |||||||| ||||||||||||||||||||    
T  33605706 gtgttcaacctccacttttctatctgatgtgagacatatagctcacacttgcacacaacaa 33605646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 94
Target Start/End: Complemental strand, 35210485 - 35210457
Alignment:
Q  66 caacactccccctcaagtgtgagtccatc 94  Q
    |||||||||||||||||||||||||||||    
T  35210485 caacactccccctcaagtgtgagtccatc 35210457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 35210602 - 35210554
Alignment:
Q  260 ctgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctaga 308  Q
    ||||| |||||| | ||||| ||||||||||| ||||||||||||||||    
T  35210602 ctgttgggtcactgggggagccagggggaccgtccacatcgaggctaga 35210554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 145; Significance: 3e-76; HSPs: 3)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 6 - 260
Target Start/End: Original strand, 1210 - 1465
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  1210 aggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgtacacaacaacattccccctcaagtgtgagtccatcttttgatcatg 1309  T
Q  106 ctcctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgc 203  Q
    |||| || || ||||||||||| |||||||||||||||   |||| |||||||| ||||||||||| ||||| | |||||||||||||||||||||||||    
T  1310 ctcccccttcgagcggaagctc-ttacttgcttgtatcgtcgttgctggtttctccgcaaacggaccgacactacttgtaccgccgttgctgctttctgc 1408  T
Q  204 gcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccac 260  Q
     |||||||||||||| ||||| ||  ||||||||| ||||||| |||||||| ||||    
T  1409 acaaacggaccggctgcctcggtcatacccttcgtcgaaccggggctctgataccac 1465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 9 - 260
Target Start/End: Original strand, 3092 - 3345
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc 108  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  3092 tgttcaacctttactcttttatccgatgtgggacatataactcacacctgcacacaacaacactccccctcaagtgtgagtccatcaactcatcatgctc 3191  T
Q  109 ctcc-tcaagcggaagctctttacttg-cttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcgc 205  Q
    | || |||||||||||||| |||||||  ||||||| | |||||||| |||| |||||||||||||| ||  ||||| ||||| |||||||||| || ||    
T  3192 ccccttcaagcggaagctc-ttacttgatttgtatcgccgttgttgggttctccgcaaacggactgatactgtttgtcccgccattgctgctttttgtgc 3290  T
Q  206 aaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccac 260  Q
    |||||||||| || ||| | ||| |||||||||||| |||| ||| |||| ||||    
T  3291 aaacggaccgactgccttggtcgtacccttcgttgatccggggctttgataccac 3345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 68 - 313
Target Start/End: Original strand, 1464 - 1712
Alignment:
Q  68 acactccccctcaagtgtgagtccatcttttcatcatgctcctcct-caagcggaagctctttacttgcttgtatcact--gttgttggtttcttcgcaa 164  Q
    ||||||||||||||||||||||| |||  ||||||||||||| ||| | |||| ||||| ||||||||||||||||||   |||| |||||||| |||||    
T  1464 acactccccctcaagtgtgagtcaatcgattcatcatgctcccccttccagcgaaagct-tttacttgcttgtatcacaacgttgctggtttctccgcaa 1562  T
Q  165 acggactgacacattt---gtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccact 261  Q
    ||||||  |||| ||    |||||||| | ||||||||||||||||||||||| ||| ||||| | | |||||| || ||||  | |||||||| |||||    
T  1563 acggacctacactttactcgtaccgccat-gctgctttctgcgcaaacggaccagctgcctcggttgtaccctttgtcgaacgag-gctctgataccact 1660  T
Q  262 gtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    ||| ||||||   |||||  |||||||| |||||||||||||||||||||||    
T  1661 gttgggtcacgaggggagctagggggactgcccacatcgaggctagaacaac 1712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 2e-68; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 6 - 271
Target Start/End: Original strand, 13415864 - 13416128
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| ||||    
T  13415864 aggtgttcaacctttactaatttatccgatgtgggacatataactcacacttgcacacaacagcact-cccctcaagtgtgagtccatctattcagcatg 13415962  T
Q  106 ctcctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgc 203  Q
    |||| || |||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||||| || ||   ||| |||||||||||||||||||||    
T  13415963 ctcccccttcaagcggaagctc-ttacttgcttgtatcgctgttgatggtttctccgcaaacggaccgagactgcttgcaccgccgttgctgctttctgc 13416061  T
Q  204 gcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcac 271  Q
    ||||||||||||| | ||||| ||| ||||||||  |||| ||| ||||||| |||||||| ||||||    
T  13416062 gcaaacggaccggttgcctcggtcgtacccttcgacgaacggga-ctctgataccactgttgggtcac 13416128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 6 - 271
Target Start/End: Complemental strand, 26074666 - 26074399
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||||||| |||||| ||||||||||||||||||||||||||||  || ||||||    
T  26074666 aggtgttcaacctttactcttttatccgatatggaacatataactcacacttgtacacaaaaacactccccctcaagtgtgagtccatcaattgatcatg 26074567  T
Q  106 ctcctcc-tcaagcggaagctctttacttgc-ttgtatcactgttgttggtttcttcgcaaacggactgaca-catttgtaccgccgttgctgctttctg 202  Q
    || |||| ||||| |||||||| |||||||| ||||||  |  ||||||| |||||||||||| ||| ||||    ||| ||||||||||||||||||||    
T  26074566 ctactccttcaagtggaagctc-ttacttgctttgtattgccattgttgggttcttcgcaaacagaccgacattgcttgcaccgccgttgctgctttctg 26074468  T
Q  203 cgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcac 271  Q
    ||||||| |||  |||  |||| ||| |||||| ||  |||||| |||||||||||| |||| ||||||    
T  26074467 cgcaaacagactagctgtctcggtcgtaccctttgtcaaaccggggctctgatgccattgttgggtcac 26074399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 8 - 264
Target Start/End: Original strand, 26074888 - 26075138
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||| |||    
T  26074888 gtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaacactccccctcaagtgtgagtccatcaattcatcaagct 26074987  T
Q  108 cctcctcaagcggaagctctttacttgc-ttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcgca 206  Q
    || |||       |||||| |||||||| ||||||| | |||| ||  |||| ||||||||| | ||||    || ||||||||||||||||||||||||    
T  26074988 ccccct-----tcaagctc-ttacttgctttgtatcgccgttgctgagttctccgcaaacgggccgacattactgcaccgccgttgctgctttctgcgca 26075081  T
Q  207 aacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtt 264  Q
    ||| |||||||| ||||| ||| ||||||||| ||| ||  |||||||| ||||||||    
T  26075082 aacagaccggctgcctcggtcgtacccttcgtcgaa-cgaggctctgataccactgtt 26075138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 313
Target Start/End: Complemental strand, 624248 - 623947
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    |||||||||||||||| |||||| | |||| |||||||||||||||||||||| ||  ||||||| |||||||||||||| ||||||| |||||||||||    
T  624248 gtgttcaacctttactattttatacaatgtgggacatataactcacacttgcaaac--caacacttcccctcaagtgtga-tccatctattcatcatgct 624152  T
Q  108 cctcctcaagcggaagctctttacttgc-ttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcgc 205  Q
    || | | |||||||||||| ||||| || ||||||| | |||| ||| |||| ||||||||||| ||||| | |||||||| ||||||| ||||||||||    
T  624151 cccctttaagcggaagctc-ttactcgctttgtatcgccgttgctgggttctccgcaaacggaccgacactacttgtaccgtcgttgcttctttctgcgc 624053  T
Q  206 aaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggct 305  Q
    |||||||||| || || || ||| ||||||| | |||| || |||||||| |||||||| |||||| |  ||||   ||||||||| | |||| ||||||    
T  624052 aaacggaccgactgccacggtcgtacccttcttcgaacagg-gctctgataccactgttgggtcactg-aggagctcgggggaccgtctacattgaggct 623955  T
Q  306 agaacaac 313  Q
    ||||||||    
T  623954 agaacaac 623947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 3295119 - 3295283
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcaca--caacaacactccccctcaagtgtgagtccatcttttcatca 103  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||  ||  ||     
T  3295119 aggtgttcaacctttactattttatccgatgtgggacatata-ctcacacttgcacacacaacaacactccccctcaagtgtgagtccatcactttttcg 3295217  T
Q  104 tgctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggac 170  Q
    |||||| ||| |||||||||||| ||||||||||||||| | |||| || ||||| |||||||||||    
T  3295218 tgctcccccttaagcggaagctc-ttacttgcttgtatcgccgttgctgctttctgcgcaaacggac 3295283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 6 - 264
Target Start/End: Original strand, 24489308 - 24489559
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||| ||||||| || || |||| ||||| |||||||||||||||||||| ||||||   ||||||||||||||||||||||||||  |||||||||    
T  24489308 aggtgtttaaccttttcttttctatctgatgtgggacatataactcacacttgaacacaa---cactccccctcaagtgtgagtccatcaattcatcatg 24489404  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcgc 205  Q
    || | |||||| | |||||| ||||||   ||||||| | |||| ||| |||| ||| ||||||| ||| ||||| ||||||| ||| |||||| |||||    
T  24489405 ctacccctcaaccagaagctttttact---ttgtatcgccgttgctggcttctccgc-aacggaccgactcatttataccgccattgttgctttatgcgc 24489500  T
Q  206 aaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtt 264  Q
    ||| |||| |||| ||||| ||| ||||||||| | | ||| | |||||| ||||||||    
T  24489501 aaatggactggctacctcggtcgtacccttcgtcggatcggggttctgataccactgtt 24489559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 6500876 - 6500756
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||  ||||||||||| |||||||||||||||||| |||||||||    
T  6500876 aggtgttcaacctttactattttatccgatgt-ggacatataactcacacttgcaaac--caacactccccatcaagtgtgagtccatctattcatcatg 6500780  T
Q  106 ctcctcc-tcaagcggaagctctt 128  Q
    |||| || ||||| ||||||||||    
T  6500779 ctcccccttcaaggggaagctctt 6500756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 31509655 - 31509554
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc-ctcctcaagcggaagctc 126  Q
    ||||||||||  |||||||||||||||||||||||||||||  ||| ||||||||||||||||||||  |||||||||||| | ||||||||||||||||    
T  31509655 tatccgatgtgagacatataactcacacttgcacacaacaa-tctctccctcaagtgtgagtccatcaattcatcatgctcacccctcaagcggaagctc 31509557  T
Q  127 ttt 129  Q
    |||    
T  31509556 ttt 31509554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 313
Target Start/End: Complemental strand, 25328262 - 25328064
Alignment:
Q  111 cctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcgcaaacg 210  Q
    |||||||||||||||||| ||||||||||||||| |||| |  ||||| ||||| | |||||||||   || ||||||||||||||||| || |||||||    
T  25328262 cctcaagcggaagctctt-acttgcttgtatcaccgttgctattttctccgcaa-cagactgacac---tggaccgccgttgctgctttttgtgcaaacg 25328168  T
Q  211 gaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccg-tgggagtcagggggaccgcccacatcgaggctagaa 309  Q
    |||||||| ||||| |||  |||||||| |||  || |||||| | |||||||| |||||| |  |||||   ||||||||| |||||| ||||||||||    
T  25328167 gaccggctgcctcgttcgtgcccttcgtcgaaggggggctctggtaccactgttgggtcactgaggggagctcgggggaccgtccacattgaggctagaa 25328068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 26074250 - 26074330
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagt 89  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||   |||||||||||||||||||||||||    
T  26074250 aggtgttcaacctttacttttttatccgatgtgtgacatataactcacacttgcac---acaacactccccctcaagtgtgagt 26074330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 218
Target Start/End: Complemental strand, 35150789 - 35150570
Alignment:
Q  18 tttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccc---------------cctcaagtgtgagtccatcttttcatc 102  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||               || ||||||||||||||||  ||||||    
T  35150789 tttactcttttattcgatgtgggacatataactcacacttgcacacaacaacaccccctccccccccccccccccccaagtgtgagtccatcaattcatc 35150690  T
Q  103 atgctcctcctcaa-gcggaagctcttt-acttgctt-gtatcactgttgttggtttcttcgcaaacggactgacacat-ttgtaccgccgttgctgctt 198  Q
    ||||||  || ||| ||||||||| ||| |||||||| ||||||| |||| ||| |||| ||||||||||| |||||   |||| ||| |||||||||||    
T  35150689 atgctcacccccaaagcggaagcttttttacttgctttgtatcaccgttgctgggttctccgcaaacggaccgacactgcttgttccgtcgttgctgctt 35150590  T
Q  199 tctgcgcaaacggaccggct 218  Q
    ||||||||||| ||||||||    
T  35150589 tctgcgcaaacagaccggct 35150570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 15370426 - 15370370
Alignment:
Q  48 actcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15370426 actcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcat 15370370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 36492321 - 36492385
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  36492321 aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcaaacaacaaca 36492385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 164
Target Start/End: Original strand, 13785732 - 13785868
Alignment:
Q  25 ttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg-ctcctcctcaagcggaag 123  Q
    ||||||||||| | ||||||||||||||||||| |||   ||||||||||||||||| |||||||| |||| |||||||||  ||| | |||||||||||    
T  13785732 ttttatccgatttgggacatataactcacacttccac---acaacactccccctcaaatgtgagtctatctattcatcatgtttccccttcaagcggaag 13785828  T
Q  124 ctctttacttgcttgtatcactgttgttggtttcttcgcaa 164  Q
    ||| |||||||||||||||  ||||| || ||||| |||||    
T  13785829 ctc-ttacttgcttgtatcggtgttgctgctttctccgcaa 13785868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 12662759 - 12662820
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  12662759 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 12662820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 299543 - 299479
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  299543 aggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcgcacaacaaca 299479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 6224250 - 6224186
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||    
T  6224250 aggtgttcaacctttactcttttatccgaagtgggacatataactcacacttgtacacaacaaca 6224186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 42405700 - 42405764
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||    
T  42405700 aggtgttcaacctttactattttatccgatgttggacatataactcacacttgtacacaacaaca 42405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 35150061 - 35150002
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaa 65  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  35150061 aggtgttcaaccttgactcttttatccgatgtgggacatataactcacacttgcacacaa 35150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 15370150 - 15370089
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||    
T  15370150 tgttcaacctttactattttattcgatgtgggacatataactcacacttgcacacaacaaca 15370089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 25327989 - 25327925
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||  |||||||||||    
T  25327989 aggtgttcaacttttactgttttatccgatgtaggacatataactcacacttagacacaacaaca 25327925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 26075266 - 26075330
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||||||||| |||||||||||    
T  26075266 aggtgttcaacctttactcttttatccgatgtgagacatataaatcacacttgtacacaacaaca 26075330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 40296419 - 40296483
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| |||||    
T  40296419 aggtgttcaaccttttctattttatccgatgtgggacatataactcacacttgcacacaccaaca 40296483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 32487448 - 32487394
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  32487448 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 32487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 38427599 - 38427447
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc 108  Q
    ||||||||||||||| || ||||| |||| |||||||||||||||||           ||||||||||||||||||||||||||||| ||||| |||| |    
T  38427599 tgttcaacctttacttttctatccaatgtgggacatataactcacac-----------aacactccccctcaagtgtgagtccatctattcatgatgcac 38427511  T
Q  109 ctc-ctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactg 172  Q
    | |  ||||| |||||||| |||||||||||||||   |||| |||||||| ||||||| |||||    
T  38427510 ccctttcaagaggaagctc-ttacttgcttgtatcgtcgttgctggtttctgcgcaaacagactg 38427447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 313
Target Start/End: Complemental strand, 6500709 - 6500579
Alignment:
Q  182 taccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccg-tgggagt 280  Q
    |||||||||||| |||||||||||||   ||| |||| ||||| | ||||||||||| |||||||| ||||||| |||||||| ||| |  |  |||||     
T  6500709 taccgccgttgcggctttctgcgcaac--gactggctgcctcggttgcacccttcgtcgaaccggaactctgataccactgttgggtaagtgaggggagc 6500612  T
Q  281 cagggggaccgcccacatcgaggctagaacaac 313  Q
    | ||||||||| |||||||||||||||||||||    
T  6500611 ctgggggaccgtccacatcgaggctagaacaac 6500579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 35151080 - 35151027
Alignment:
Q  18 tttactcttttatccgatgtaggacatataactcacacttgcacacaacaacac 71  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  35151080 tttactcttttattcgatgtgggacatataactcacacttgcacacaacaacac 35151027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 36568671 - 36568732
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    ||||||||||| |||||| || |||||||||| |||||||||||||||||||||||||||||    
T  36568671 aggtgttcaacttttacttttctatccgatgtgggacatataactcacacttgcacacaaca 36568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 129
Target Start/End: Original strand, 36522002 - 36522121
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    |||||||||||  ||| || |||| ||||| ||||||||||||||||||||| |   ||||||||| ||||||||||||||||||||  |||||| |  |    
T  36522002 gtgttcaacctcaacttttctatctgatgtgggacatataactcacacttgcgc---acaacactctccctcaagtgtgagtccatcaattcatcgttat 36522098  T
Q  108 -cctcctcaagcggaagctcttt 129  Q
     || |||||||||||||||||||    
T  36522099 cccacctcaagcggaagctcttt 36522121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 6500504 - 6500451
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  6500504 aggtgttcaacctttactattttatccgatgt-ggacatataactcacacttgca 6500451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 11417081 - 11417143
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||  ||||||||||||||||||    
T  11417081 aggtgttcaacctttactattttatccgatgtggaacatataact--cacttgcacacaacaaca 11417143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 35914900 - 35914839
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||  ||||||||||||| ||||  |||||||||||    
T  35914900 tgttcaacctttactcttttatccgatgtgtgacatataactcatacttatacacaacaaca 35914839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 41632836 - 41632775
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| || ||||||||||  ||||||||||| ||||||||||||||||    
T  41632836 aggtgttcaacctttacttttctatccgatgtgagacatataacttacacttgcacacaaca 41632775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 7768904 - 7768852
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttg 58  Q
    |||||||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  7768904 aggtgttcaacctttattattttatccgatgtaggatatataactcacacttg 7768852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 18603224 - 18603276
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttg 58  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  18603224 aggtgttcaacctttactattttatctgatgtgggacatataactcacacttg 18603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 1028623 - 1028682
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    ||||||| |||||||| || |||||||||| |||||||||||||||||||| ||||||||    
T  1028623 gtgttcatcctttacttttctatccgatgtgggacatataactcacacttgtacacaaca 1028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 39309736 - 39309677
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    ||||||||| ||||| |||||||||||||| |||||||||||||| ||||| ||||||||    
T  39309736 gtgttcaacatttacccttttatccgatgtgggacatataactcatacttgtacacaaca 39309677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 3295448 - 3295509
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||||||||||||||||| ||||||||||||| | |||||| |||||||||| ||||||||||    
T  3295448 aggtgttcaacctttactattttatccgatgtggaacatat-actcacacttccacacaacaa 3295509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 9498411 - 9498473
Alignment:
Q  67 aacactccccctcaagtgtgagtccatcttttcatcatgctcctcc-tcaagcggaagctctt 128  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||    
T  9498411 aacacaccccctcaagtgtgagtccatctattcatcatgctcccccttcaaggggaagctctt 9498473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 27502140 - 27502194
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    ||||||| |||||||||| |||||||| |||| ||||||||||||||||||||||    
T  27502140 aggtgtttaacctttactattttatccaatgtgggacatataactcacacttgca 27502194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 3295249 - 3295306
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttc 236  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||| ||| |||||||    
T  3295249 ttgtatcgccgttgctgctttctgcgcaaacggaccgactgcctcggtcgtacccttc 3295306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 41170685 - 41170640
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcaca 54  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  41170685 tgttcaacctttactattttatccgatgtgggacatataactcaca 41170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 301013 - 300949
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||| ||||||||||||| ||||||| ||||| ||||||||||| |||||||| |||||| ||||    
T  301013 aggtattcaacctttactgttttatctgatgtgggacatataacccacacttgtacacaaaaaca 300949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 623870 - 623818
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  623870 gtgttcaacctttactattatatccgatgtgagacatataactcacacttgca 623818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 5723897 - 5723949
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    ||||||||| |||| | ||||||||||||| ||||||||||||||||||||||    
T  5723897 gtgttcaacttttattattttatccgatgtgggacatataactcacacttgca 5723949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 35167942 - 35168006
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||| |||||  || | |||||||| ||||| |||||||||||    
T  35167942 aggtgttcaacctttactcttttatctgatgtgagatacataactcatacttgtacacaacaaca 35168006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 38427483 - 38427348
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccg-tggg 277  Q
    ||||| || |||||||| ||||||||||||| ||| ||||  || | || |||||||||| ||||||| ||||| || |||||||| | ||| ||  |||    
T  38427483 ttgtatcgtcgttgctggtttctgcgcaaacagactggctgtcttggtcacacccttcgtcgaaccggggctctaataccactgttggatcatcgaaggg 38427384  T
Q  278 agtcagggggaccgcccacatcgaggctagaacaac 313  Q
    ||   ||||||||||| ||||||||| |||||||||    
T  38427383 agctcgggggaccgccaacatcgaggttagaacaac 38427348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 26900082 - 26900138
Alignment:
Q  14 aacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||| ||||||||||| ||||| |||||||||||||| | ||| |||||||||||    
T  26900082 aaccttaactcttttatctgatgtgggacatataactcaaatttgtacacaacaaca 26900138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 34753129 - 34753193
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||| || ||||| |||| |||||||||||| ||| ||| |||||||||||    
T  34753129 aggtgttcaacttttacttttctatccaatgtgggacatataacttacatttgtacacaacaaca 34753193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 6225098 - 6225047
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacactt 57  Q
    |||||||||||||||| ||||||||| ||||| ||| |||||||||| ||||    
T  6225098 aggtgttcaacctttattcttttatctgatgtgggatatataactcagactt 6225047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 313
Target Start/End: Original strand, 3295336 - 3295374
Alignment:
Q  275 gggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  3295336 gggagtgagggggaccgtccacatcgaggctagaacaac 3295374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 9498758 - 9498812
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| || |||| |||||  ||||||||||||||| |||||    
T  9498758 aggtgttcaacctttactattctatctgatgtgagacatataactcacatttgca 9498812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 15370338 - 15370268
Alignment:
Q  183 accgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctg 253  Q
    ||||| |||||| ||||||||||||||||||||||  ||||| ||| |||||| || |||| || ||||||    
T  15370338 accgcggttgctactttctgcgcaaacggaccggcagcctcggtcgtaccctttgtcgaacgggggctctg 15370268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 29549360 - 29549413
Alignment:
Q  7 ggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||| |||||||| ||||||| ||| | | ||||||||||||||||||||    
T  29549360 ggtgttcatcctttactattttatctgatatggaacatataactcacacttgca 29549413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 2411058 - 2411010
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacactt 57  Q
    |||||||| ||||||  | ||||| ||||||||||||||||||||||||    
T  2411058 tgttcaacttttacttctctatccaatgtaggacatataactcacactt 2411010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 26074372 - 26074320
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttg 58  Q
    |||||||||| ||||| | || |||| ||||| ||||||||||||||||||||    
T  26074372 aggtgttcaatctttagttttctatctgatgtgggacatataactcacacttg 26074320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 36527209 - 36527249
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||| ||||| |||||||||||||||||||| |||||||||    
T  36527209 tatctgatgtgggacatataactcacacttgtacacaacaa 36527249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 41635295 - 41635359
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||||||||||| ||||    |||||||||||| ||||  |||||||||||    
T  41635295 aggtgttcaacatttactcttttatctgatgggaaacatataactcatacttatacacaacaaca 41635359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 3e-67; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 7 - 313
Target Start/End: Original strand, 45489434 - 45489741
Alignment:
Q  7 ggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacact-ccccctcaagtgtgagtccatc-ttttcatcat 104  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  45489434 ggtgttcaacctttactcttttatccgatgtgagacatataattcacacttgtacacaacaacactcccccctcaagtgtgagtccatcgttttcatcat 45489533  T
Q  105 gctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacat-ttgtaccgccgttgctgctttctgc 203  Q
    ||||||| |||||||||||||| ||||||||||||||| || ||| ||| |||| ||||||||||| ||||| | |||||||||||||||| || ||| |    
T  45489534 gctcctcttcaagcggaagctc-ttacttgcttgtatcgctattgctgggttctccgcaaacggaccgacacttcttgtaccgccgttgctactatctac 45489632  T
Q  204 gcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgagg 303  Q
     |||||||||||| |  |||| ||| |||||||||  ||| ||| ||||||| ||| |||| |||||| |  |||||  |||||| || ||||||||||     
T  45489633 acaaacggaccggttgtctcggtcgtacccttcgtcaaacggga-ctctgataccattgttgggtcactggaggagtttgggggatcggccacatcgaga 45489731  T
Q  304 ctagaacaac 313  Q
    ||||||||||    
T  45489732 ctagaacaac 45489741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 264
Target Start/End: Complemental strand, 20826269 - 20826015
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||| ||  ||   | ||||||||||||||||||||||||||||| |||||||||||    
T  20826269 gtgttcaacttttactattttatccgatgtgggacatataactcacatttctac---ataacactccccctcaagtgtgagtccatctattcatcatgct 20826173  T
Q  108 cctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcgc 205  Q
    || || ||||||||| |||  ||||||||||||||| | |||| |||||||| ||||||||||   ||||   |||||||||||||||||||||||||||    
T  20826172 cccccttcaagcggacgct-attacttgcttgtatcgccgttgctggtttctccgcaaacggatcaacactgcttgtaccgccgttgctgctttctgcgc 20826074  T
Q  206 aaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtt 264  Q
    ||| ||||||||| ||||| ||| ||||||||| |||  || |||||||||||||||||    
T  20826073 aaatggaccggctgcctcggtcgtacccttcgtcgaattggggctctgatgccactgtt 20826015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 44621480 - 44621270
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||| |||||||||| |||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| ||    
T  44621480 aggtgtttaacctttactgttttatcccatgttggacatataactcacacttgcacacaacgacactccccctcaagtgtgagtccatcaattcatcgtg 44621381  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcg 204  Q
    |||| ||  |||||||||||||||||||| |||||||   |||| |||| |||  ||||| |||| ||||| | ||||| ||||||||||||||||||||    
T  44621380 ctcccccaaaagcggaagctctttacttgtttgtatcgtcgttgctggtgtctctgcaaatggaccgacactacttgtatcgccgttgctgctttctgcg 44621281  T
Q  205 caaacggaccg 215  Q
     ||||||||||    
T  44621280 aaaacggaccg 44621270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 6 - 264
Target Start/End: Complemental strand, 2741125 - 2740869
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||| ||||||||||||| || |||| ||||| |||||||||||||||||||||||| ||||   |||||| |||||||||||||||||  |||||||||    
T  2741125 aggtattcaacctttactattctatctgatgtgggacatataactcacacttgcacataaca---ctccccttcaagtgtgagtccatcaattcatcatg 2741029  T
Q  106 ctcctcc--tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgc 203  Q
    |||  ||  ||||||||||||||||   ||||| ||||| | |||| ||||||||  |||||||||| |||||  ||||||||| |||||||||||||||    
T  2741028 ctctccccttcaagcggaagctcttactttgctcgtatcgccgttgctggtttctctgcaaacggaccgacacgattgtaccgctgttgctgctttctgc 2740929  T
Q  204 gcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtt 264  Q
    ||||||||| ||||| ||||| ||| ||||||||| ||| ||| |||||||| ||||||||    
T  2740928 gcaaacggatcggctgcctcggtcgtacccttcgtcgaa-cggggctctgataccactgtt 2740869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 313
Target Start/End: Original strand, 49076550 - 49076858
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccat--cttttcatca 103  Q
    |||||||||||||||||| ||||||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||    
T  49076550 aggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaacaacactcctcctcaagtgtgagtccatcacttttcatca 49076649  T
Q  104 tgctcctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctg 202  Q
    || ||| || |||||||||| ||| ||||||||||||||    |||| |||||||| | ||||||||| ||||| ||||||||| | |||||||||| ||    
T  49076650 tgttcccccttcaagcggaaactc-ttacttgcttgtattgtcgttgctggtttctccacaaacggaccgacacgtttgtaccgtcattgctgctttatg 49076748  T
Q  203 cg-caaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggag-tcagggggaccgcccacatcg 300  Q
    ||  ||| |||| |||| ||||| | | |||||| || ||| ||| |||||||| |||||||| |||||  | ||||| ||| |||||| | ||||||||    
T  49076749 cgtaaaatggactggctgcctcggtagtaccctttgtcgaa-cggggctctgataccactgttgggtca-tgagggagctca-ggggacagtccacatcg 49076845  T
Q  301 aggctagaacaac 313  Q
    |||||||||||||    
T  49076846 aggctagaacaac 49076858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 313
Target Start/End: Complemental strand, 54108967 - 54108666
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||||||||| |||||||  ||| ||||||||||||||||   |||||||| ||||||||||| ||   |||||||||    
T  54108967 aggtgttcaacctttactattttatccgatgtgggacata--actgacacttgcacacaaca---ctcccccttaagtgtgagtctattaattcatcatg 54108873  T
Q  106 ctcctcct-caagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgc 203  Q
    |||| ||| ||||||||||||||| ||||||||||||| | |||| |||||||| | |||||| || ||||| | |||||||||| |||||||||| |||    
T  54108872 ctcccccttcaagcggaagctctt-acttgcttgtatcgccgttgctggtttctccacaaacgaaccgacactacttgtaccgccattgctgctttatgc 54108774  T
Q  204 gcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggag-tcagggggaccgcccacatcgag 302  Q
    ||||||||||||||| ||||| ||| ||||||||| ||| ||  |||||||| || ||||| |||||| | ||||| |  ||||||||| |||||| |||    
T  54108773 gcaaacggaccggctgcctcg-tcgtacccttcgtcgaa-cgtggctctgataccgctgttgggtcactgggggagctatgggggaccg-ccacattgag 54108677  T
Q  303 gctagaacaac 313  Q
    |||||||||||    
T  54108676 gctagaacaac 54108666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 64 - 312
Target Start/End: Original strand, 16889313 - 16889562
Alignment:
Q  64 aacaacactccccctcaagtgtgagtccatct-tttcatcatgctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgc 162  Q
    |||||||||||||||||||||||||||||||  ||| ||| |||||| |||||||||||||||||||||||| |||||||   |||| |||||||| | |    
T  16889313 aacaacactccccctcaagtgtgagtccatcactttaatcgtgctccccctcaagcggaagctctttacttgtttgtatcgtcgttgctggtttctcctc 16889412  T
Q  163 aaacggactgacac-atttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccact 261  Q
    |||||||| ||||| | ||||||||||||||||||||||||| |||||||||||| | ||||  ||| ||||||||| |||| || |||||| | ||| |    
T  16889413 aaacggacggacactacttgtaccgccgttgctgctttctgcacaaacggaccggttgcctcagtcgtacccttcgtcgaacagg-gctctggtaccatt 16889511  T
Q  262 gtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaa 312  Q
    ||| ||||||   |||||   | ||||||| ||||||||||| ||||||||    
T  16889512 gttgggtcacgtggggagctcgagggaccgtccacatcgaggttagaacaa 16889562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 39404452 - 39404217
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||  |||||| ||    
T  39404452 aggtgttccacctttactcttttatctgatgtgggacatataactcacacttgtacacaacaacactcctcctcaagtgt-agtccatcaattcatcgtg 39404354  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttg---taccgccgttgctgctttct 201  Q
    |||  ||||||||||||||||||      |||||||| | |||| |||||||| ||||||||||| |||||   |||   | ||| ||||||||||||||    
T  39404353 ctctccctcaagcggaagctctta-----cttgtatcgccgttgatggtttctccgcaaacggaccgacactgcttgcactgccgtcgttgctgctttct 39404259  T
Q  202 gcgcaaacggaccggctccctcgatcgcacccttcgttgaac 243  Q
     |||||||||||||||| ||||| ||  ||||||||| ||||    
T  39404258 acgcaaacggaccggctgcctcggtcatacccttcgtcgaac 39404217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 44620712 - 44620578
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    ||||||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||| ||||    
T  44620712 gtgttcaacctctactatttcatccgatgtgggacatataactcacacttgcacacaacgacactccacctcaagtgtgagtccatcaattcatcgtgct 44620613  T
Q  108 cctcctcaagcggaagctctttacttgcttgtatc 142  Q
    || ||  |||||||||||||||||||| |||||||    
T  44620612 cccccaaaagcggaagctctttacttgtttgtatc 44620578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 105 - 313
Target Start/End: Original strand, 23817498 - 23817708
Alignment:
Q  105 gctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgc 203  Q
    ||||| |||||||||||||||||||||||| |||||||  ||||| |||||||| |  |||| ||| ||||| | |||||||| ||||||||||||||||    
T  23817498 gctccccctcaagcggaagctctttacttgtttgtatcgttgttgctggtttctccagaaacagaccgacactacttgtaccgtcgttgctgctttctgc 23817597  T
Q  204 gcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccg-tgggag-tcagggggaccgcccacatcga 301  Q
    |||||| |||||||| ||||||||| ||||||||| |||  || ||| |||| |||||||| | ||| ||  ||||| |  ||||||||| |||||||||    
T  23817598 gcaaacagaccggctgcctcgatcgtacccttcgtcgaa-tggggctatgataccactgttggatcatcgaggggagctatgggggaccgtccacatcga 23817696  T
Q  302 ggctagaacaac 313  Q
    ||||||||||||    
T  23817697 ggctagaacaac 23817708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 52884941 - 52884856
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtcca 92  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  52884941 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacact-cccctcaagtgtgagtcca 52884856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 3341180 - 3341094
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    ||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  3341180 gtgtttaacctttactcttttatccaatgtgggacatataactcacacttgcacacaacaacactctgcctcaagtgtgagtccatc 3341094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 22028063 - 22028162
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||  | ||||||||||||| |||||||||| |||||||||||||||||||||| || ||| |||||||||||||| |||||||||||    
T  22028063 aggtgttcaacctttcgtattttatccgatgtgggacatataagtcacacttgcacacaacaacacccctccttaagtgtgagtccatattttcatcatg 22028162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 6 - 264
Target Start/End: Complemental strand, 43174561 - 43174321
Alignment:
Q  6 aggtgttcaacctttactctttt-atccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcat 104  Q
    ||||||||||||||||||||||| ||| |||||  | ||||||||||||||||| |||||||||||||||||||||||||||                 |    
T  43174561 aggtgttcaacctttactctttttatctgatgtgtggcatataactcacacttgtacacaacaacactccccctcaagtgtg-----------------t 43174479  T
Q  105 gctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacaca--tttgtaccgccgttgctgctttctg 202  Q
     | |||  |||||||||||||||| ||||| ||||||| | ||||||||||||| ||||||| ||| |||||   ||||||||| ||||||| |||||||    
T  43174478 ccccct--tcaagcggaagctctt-acttgtttgtatcgccgttgttggtttctccgcaaacagaccgacactgctttgtaccgtcgttgctactttctg 43174382  T
Q  203 cgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtt 264  Q
    |||||||||||||||| ||||||||  ||| ||||| ||| ||| ||| |||| ||||||||    
T  43174381 cgcaaacggaccggctgcctcgatcttacctttcgtcgaa-cggtgctttgataccactgtt 43174321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 36629291 - 36629172
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||| ||| |||||| || |||||||||| |||||||||||||||||||| ||   |||||||||||||||||||||||| |||||  |||||||||    
T  36629291 aggtgtttaacttttacttttctatccgatgtgggacatataactcacacttgaac---acaacactccccctcaagtgtgagcccatcaattcatcatg 36629195  T
Q  106 ctcctcc-tcaagcggaagctct 127  Q
    |||| || |||||||||||||||    
T  36629194 ctccaccttcaagcggaagctct 36629172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 3700419 - 3700357
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3700419 aggtgttcaacatttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 3700357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 10245974 - 10245910
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  10245974 aggtgttcaacctttactcttttatccgatgtggggcatataactcacacttgcacacaacaaca 10245910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 36608763 - 36608827
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36608763 aggtgttcaacttttactcttttatccgatgttggacatataactcacacttgcacacaacaaca 36608827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 10246398 - 10246317
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtc 90  Q
    ||||||||||||||||||||||||||| |  ||||||||||  |||||||||||||||| |||||||||||||| |||||||    
T  10246398 tgttcaacctttactcttttatccgatttgagacatataacagacacttgcacacaacagcactccccctcaagcgtgagtc 10246317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 41707567 - 41707628
Alignment:
Q  7 ggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  41707567 ggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaa 41707628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 52884749 - 52884688
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  52884749 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 52884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 82 - 313
Target Start/End: Original strand, 22028163 - 22028396
Alignment:
Q  82 gtgtgagtccatcttttcatcatgctcctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-att 179  Q
    ||||||||||||||||||||| |||||| || ||||||| |||||| ||||||||||| |||   |||| |||||||| ||||||||||| ||||| | |    
T  22028163 gtgtgagtccatcttttcatcgtgctcccccttcaagcgaaagctc-ttacttgcttgaatcgtcgttgctggtttctccgcaaacggaccgacactact 22028261  T
Q  180 tgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccg-tggga 278  Q
    ||||||| ||||| |||||| ||| ||||||||| | ||  |||| ||  ||||||||| ||| ||| |||| ||| |||||||| |||||  |  ||||    
T  22028262 tgtaccgtcgttgttgctttatgcacaaacggactgactgtctcggtcatacccttcgtcgaa-cggggctccgataccactgttgggtcagtgagggga 22028360  T
Q  279 g-tcagggggaccgcccacatcgaggctagaacaac 313  Q
    | |  ||||||||| |||||| ||||||||||||||    
T  22028361 gctttgggggaccgtccacattgaggctagaacaac 22028396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 41370618 - 41370486
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    ||||||||||||||| |||||||| ||||   |||||||| ||||| ||||||||||||| |||  || ||||||||  ||||||| |||||| | || |    
T  41370618 ttgtaccgccgttgcggctttctgtgcaac--gaccggctgcctcggtcgcacccttcgtcgaatgggggctctgatatcactgttgggtcactggggaa 41370521  T
Q  279 gtcagggggaccgcccacatcgaggctagaacaac 313  Q
    ||  ||||||||| |||||||||||||||||||||    
T  41370520 gttcgggggaccgtccacatcgaggctagaacaac 41370486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 3244556 - 3244649
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||||||| || ||||||||||  ||||||||||||||||||||||   ||||||||| |||| ||| |||||||||||| |||||||||    
T  3244556 tgttcaacctttacttttctatccgatgtgagacatataactcacacttgcac---acaacactctcccttaagcgtgagtccatctattcatcatg 3244649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 36572073 - 36572007
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacact 72  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  36572073 aggtgttcaacatttactcttttattcgatgtgggacatataactcacacttgtacacaacaacact 36572007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 50002478 - 50002416
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  50002478 gtgttcaacctttactcttttatccgatgtgagacatataactcacacttgcaaacaacaaca 50002416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 2740754 - 2740693
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||    
T  2740754 aggtgttcaacctttactgttctatccgatgtgggacatataactcacacttgcacacaaca 2740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 22183369 - 22183430
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  22183369 tgttcaacatttactcttttatccgatgtgggatatataactcacacttgcacacaacaaca 22183430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 25483387 - 25483326
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  25483387 tgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaaca 25483326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 313
Target Start/End: Complemental strand, 3341070 - 3340936
Alignment:
Q  178 tttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggg 277  Q
    ||||||||| |||||||||||||||||| ||| |||| ||  ||||| ||| ||| ||||| ||||||| |||||||| |||||||| |||||| | |||    
T  3341070 tttgtaccgtcgttgctgctttctgcgc-aactgaccagcgacctcggtcgtaccgttcgtcgaaccggggctctgataccactgttgggtcactggggg 3340972  T
Q  278 ag-tcagggggaccgcccacatcgaggctagaacaac 313  Q
    || ||| || ||||| |||||||||||||||||||||    
T  3340971 agctca-ggagaccgtccacatcgaggctagaacaac 3340936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 4390203 - 4390267
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||| ||||| ||| || |||||||||||||||||||||||||    
T  4390203 aggtgttcaacctttactcttttatctgatgtgggatatgtaactcacacttgcacacaacaaca 4390267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 34646751 - 34646815
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||||    
T  34646751 aggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgtacacaacaaca 34646815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 16888918 - 16888993
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttg-cacacaacaacactccccctca 80  Q
    |||| ||||||||||||| || |||||||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  16888918 aggtattcaacctttacttttctatccgatgtgggacatataactcacacttgccacacaacaacacttcccctca 16888993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 135 - 264
Target Start/End: Complemental strand, 44621307 - 44621177
Alignment:
Q  135 cttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcaccc 233  Q
    |||||||| | |||| || ||||| || |||||||| ||||| | ||||| |||||||||||||||||||| |||||||||||||  |||| ||| ||||    
T  44621307 cttgtatcgccgttgctgctttctgcgaaaacggaccgacactacttgtatcgccgttgctgctttctgcgaaaacggaccggctgtctcggtcgtaccc 44621208  T
Q  234 ttcgttgaaccggagctctgatgccactgtt 264  Q
    |||||  |||| | |||||||| ||||||||    
T  44621207 ttcgtcaaaccagggctctgataccactgtt 44621177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 55933226 - 55933280
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  55933226 aggtgttcaacccttactattttatccgatgtaggacatataactcacacttgca 55933280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 1731752 - 1731813
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||| |||||||||||||||    
T  1731752 tgttcaacctttactgttttatctgatgtgggacatataactcacatttgcacacaacaaca 1731813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 20825890 - 20825829
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||||    
T  20825890 aggtgttcaacctttactcttttatccgatgtggaacatataactcacatttgtacacaaca 20825829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 39404070 - 39404013
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaa 65  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||    
T  39404070 gtgttcaacctttactcttttattcaatgtaggacatataactcacacttgtacacaa 39404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 4955419 - 4955483
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||| ||| ||||||||||| |  |||||||||||||||||||||||||||||||    
T  4955419 aggtgttcaaccttaactattttatccgatatgagacatataactcacacttgcacacaacaaca 4955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 50630859 - 50630911
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  50630859 gtgttcaacctttactattttatccgatgtaggacatataactcacgcttgca 50630911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 18932887 - 18932982
Alignment:
Q  31 ccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcctcc-tcaagcggaagctctt 128  Q
    ||||||| |||||||||||||| ||||||| ||  |||||| |||||||||||||||||| |||| ||||||||||||| || |||||||||| |||||    
T  18932887 ccgatgtgggacatataactcagacttgcaaac--caacac-ccccctcaagtgtgagtctatctattcatcatgctcccccttcaagcggaaactctt 18932982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 51768162 - 51768225
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaac 69  Q
    ||||||||||| ||||||||| ||| |||| |||||||||||||||||| ||||||||||||||    
T  51768162 aggtgttcaacatttactcttatattcgatataggacatataactcacatttgcacacaacaac 51768225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 31691470 - 31691356
Alignment:
Q  125 tctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcgcaaacggaccggctccctc 223  Q
    |||||||||| ||||||| | |||| ||||||||  ||||||| |||||||| ||||||||||   |||||| |||||||||||||||||| ||  ||||    
T  31691470 tctttacttgtttgtatcgccgttgctggtttctctgcaaacgaactgacactatttgtaccgtttttgctgttttctgcgcaaacggaccagcggcctc 31691371  T
Q  224 gatcgcacccttcgt 238  Q
    | ||| |||||||||    
T  31691370 ggtcgtacccttcgt 31691356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 22028471 - 22028539
Alignment:
Q  6 aggtgttcaacctttactctttt--atccgatgtaggacatataactcacacttgcacacaacaacact 72  Q
    |||||||||||||||| | ||||  |||||||||||||||||||| | |||||||||||||||||||||    
T  22028471 aggtgttcaacctttatttttttttatccgatgtaggacatataagtaacacttgcacacaacaacact 22028539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 32941225 - 32941286
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| || | ||||||||| ||||||||||||||||||||| ||||||    
T  32941225 aggtgttcaacctttactgttctttccgatgtaagacatataactcacacttgcagacaaca 32941286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 44620999 - 44620926
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtagg-acatataactcacacttgcacacaacaacactccccct 78  Q
    |||||||||||||||||  ||||||||||||| || |||| |||||||||||||  ||||||||||||||||||    
T  44620999 aggtgttcaacctttacagttttatccgatgttgggacatctaactcacacttgtccacaacaacactccccct 44620926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 54741280 - 54741341
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| || ||||||||||  ||||||||| ||||||||||||||||||    
T  54741280 aggtgttcaacctttacttttctatccgatgtgagacatataattcacacttgcacacaaca 54741341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 44620350 - 44620286
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| |||||||| |||| |||||||||||||| | ||| |||||||||||    
T  44620350 aggtgttcaacctttactattttatcccatgtgggacatataactcatatttgtacacaacaaca 44620286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 45050649 - 45050593
Alignment:
Q  12 tcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||||||||||||||||||  |||||  |||||||||||||||||||||||||||||    
T  45050649 tcaacctttactcttttatttgatgtgagacatataactcacacttgcacacaacaa 45050593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 50788087 - 50788139
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  50788087 gtgttcaacctttactattttatccgatgtgggacatataacttacacttgca 50788139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 3340861 - 3340802
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaa 65  Q
    ||||| |||||||||||||||| ||| ||||  |||||||||||||||||||||||||||    
T  3340861 aggtgctcaacctttactctttcatctgatgcgggacatataactcacacttgcacacaa 3340802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 54017804 - 54017870
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtagg--acatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| ||||||||||||| ||  | |||||||||||| |||||||||||||||    
T  54017804 aggtgttcaacctttactgttttatccgatgtgggatatatataactcacatttgcacacaacaaca 54017870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 11348432 - 11348494
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||  ||| ||||||| ||||||| |||||||||||||| |||||||||||||||    
T  11348432 gtgttcaacctccactattttatctgatgtagaacatataactcacaattgcacacaacaaca 11348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 19504757 - 19504695
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||| |||||| ||||||||||| | |||||||||||||| ||||| |||||||||||    
T  19504757 gtgttcaacttttactattttatccgatatgggacatataactcatacttgtacacaacaaca 19504695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 45496804 - 45496723
Alignment:
Q  188 cgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtca 270  Q
    |||||||||||||| ||||| | |||||||  ||||| ||||||||||||| ||||||| |||||||| |||||||| |||||    
T  45496804 cgttgctgctttctacgcaa-ctgaccggcggcctcggtcgcacccttcgtcgaaccggggctctgataccactgttgggtca 45496723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 49880214 - 49880160
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| |||||| | |||| ||||||||||||||||||||||    
T  49880214 aggtgttcaacctttactattttattcaatgtgggacatataactcacacttgca 49880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 54017700 - 54017754
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacac 63  Q
    ||||||||||||||| ||||||| || || |||||||||||||||||||||||||    
T  54017700 tgttcaacctttactattttatctgacgtgggacatataactcacacttgcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 39792962 - 39793023
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    ||||||||||| |||||| || |||| ||||| |||||||||||||||||||| ||||||||    
T  39792962 aggtgttcaacatttacttttctatctgatgtgggacatataactcacacttgtacacaaca 39793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 50627668 - 50627748
Alignment:
Q  180 tgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccact 261  Q
    |||||||||| |||||||||||| ||||||| ||||||| ||||||||| |||||| || ||| ||| |||||||| |||||    
T  50627668 tgtaccgccgctgctgctttctgtgcaaacgaaccggctgcctcgatcgtaccctttgtcgaa-cggggctctgataccact 50627748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 49076932 - 49076992
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaac 66  Q
    |||||||||||||||||| ||||| || || | | ||||||||||||||||||||||||||    
T  49076932 aggtgttcaacctttactattttagccaatatggaacatataactcacacttgcacacaac 49076992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 50459772 - 50459724
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacactt 57  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  50459772 tgttcaacctttactcttttaaccgatgtggaacatataactcacactt 50459724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 54343103 - 54343147
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataact 50  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  54343103 aggtgttcaacctttactattttatccgatgtgggacatataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 11706636 - 11706687
Alignment:
Q  19 ttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||| ||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  11706636 ttacttttttatccgatgtgggacatacaactcacccttgcacacaacaaca 11706687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 41370411 - 41370357
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||| |||||| |||||| ||||||||||| | ||||||||||||||||||||||    
T  41370411 aggttttcaacatttactattttatccgatttgggacatataactcacacttgca 41370357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 16889638 - 16889703
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttg-cacacaacaaca 70  Q
    |||| ||||||||||||| || |||||||| |  ||||||||||||||||||| ||||||||||||    
T  16889638 aggtattcaacctttacttttctatccgatttgagacatataactcacacttgccacacaacaaca 16889703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 25483526 - 25483465
Alignment:
Q  252 tgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |||| |||||||| |||||| | ||||| ||||| ||||| |||||||||||||||||||||    
T  25483526 tgataccactgttgggtcactgggggagccagggagaccgtccacatcgaggctagaacaac 25483465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 44620407 - 44620362
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactc 51  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||    
T  44620407 aggtgttcaacctttactgttttatccgatgtggaacatataactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 49302955 - 49302902
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcaca 62  Q
    ||||||||||||||| ||||||  ||||| ||||||||||||||||||| ||||    
T  49302955 tgttcaacctttacttttttatttgatgtgggacatataactcacacttacaca 49302902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 40067085 - 40067045
Alignment:
Q  18 tttactcttttatccgatgtaggacatataactcacacttg 58  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  40067085 tttacacttttatccgatgtagaacatataactcacacttg 40067045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 6876218 - 6876261
Alignment:
Q  25 ttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||||||||||||| || |||||| |||||||||||||||||||    
T  6876218 ttttatccgatgtaagatatataaatcacacttgcacacaacaa 6876261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 10246182 - 10246048
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggg- 277  Q
    |||||||| |||||||||||||||| ||| | ||| |||  ||||  ||| ||||||| | ||||||| | |||||| |||||||| ||||| || |||     
T  10246182 ttgtaccgtcgttgctgctttctgcacaa-ctgacaggcggcctcagtcgtacccttcatcgaaccggggttctgataccactgttgggtcagcgagggg 10246084  T
Q  278 agtcagggggaccgcccacatcgaggctagaacaac 313  Q
    ||   |||||| || |||||||||||||||||||||    
T  10246083 agcttgggggagcgtccacatcgaggctagaacaac 10246048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 22183252 - 22183291
Alignment:
Q  274 tgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  22183252 tgggagtctgggggaccgtccacatcgaggctagaacaac 22183291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 28034281 - 28034222
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||  ||| || |||||||||  |||||||||| ||||||||||||||||||    
T  28034281 gtgttcaacctccacttttctatccgatgcgggacatataattcacacttgcacacaaca 28034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 54936250 - 54936190
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| ||||||| ||||| ||    |||||||||||||| |||||||||||    
T  54936250 aggtgttcaacctttactattttatctgatgtggg----ataactcacacttgtacacaacaaca 54936190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 11783308 - 11783365
Alignment:
Q  43 atataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcat 101  Q
    ||||||| |||||||||| ||||||  ||||||| ||||||||||||||||| ||||||    
T  11783308 atataacacacacttgcatacaacactactcccc-tcaagtgtgagtccatcatttcat 11783365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 19895506 - 19895425
Alignment:
Q  231 cccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |||||||| |||||| ||||||||| |||||||| |||||  | |||||  | ||||||| || |||||||||||||||||||    
T  19895506 cccttcgtcgaaccgaagctctgataccactgttgggtcatggggggagctatggggaccacc-acatcgaggctagaacaac 19895425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 313
Target Start/End: Complemental strand, 50002585 - 50002555
Alignment:
Q  283 gggggaccgcccacatcgaggctagaacaac 313  Q
    |||||||||||||||||||||||||||||||    
T  50002585 gggggaccgcccacatcgaggctagaacaac 50002555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 54108590 - 54108527
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgc-acacaacaaca 70  Q
    |||||||||||||||||| |||||||| || | ||||  ||||||||||||||| |||||||||||    
T  54108590 aggtgttcaacctttactattttatcctatatgggac--ataactcacacttgcaacacaacaaca 54108527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 6975563 - 6975612
Alignment:
Q  11 ttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    ||||||||||||| ||||||| |||||  ||||||||||||||| |||||    
T  6975563 ttcaacctttactattttatcggatgtgagacatataactcacatttgca 6975612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 255
Target Start/End: Original strand, 18933027 - 18933101
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgat 255  Q
    |||||||||||||||  |||||||| ||| |  ||||||| ||||| |||||| |||||| ||||||| ||||||||    
T  18933027 ttgtaccgccgttgcgactttctgcacaacc--accggctgcctcggtcgcacacttcgtcgaaccggggctctgat 18933101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 70
Target Start/End: Original strand, 23817783 - 23817812
Alignment:
Q  41 acatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||||||||||||||||||    
T  23817783 acatataactcacacttgcacacaacaaca 23817812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 44621056 - 44621011
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactc 51  Q
    |||||||||||||||||| ||||||||||||| || |||| |||||    
T  44621056 aggtgttcaacctttactgttttatccgatgtgggtcatacaactc 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 34004689 - 34004744
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaa 65  Q
    ||||||||||||| | |||||||  ||||  ||||||||||||||||||||||||||    
T  34004689 tgttcaacctttagt-ttttatcatatgtgtgacatataactcacacttgcacacaa 34004744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 55933121 - 55933153
Alignment:
Q  283 gggggaccgcccacatcgaggctagaacaactg 315  Q
    ||||||||| |||||||||||||||||||||||    
T  55933121 gggggaccgtccacatcgaggctagaacaactg 55933153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 4e-66; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 6 - 313
Target Start/End: Complemental strand, 45123060 - 45122753
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  45123060 aggtgtttaacctttactattttatccgatgtgggacatataactcacacttgcacacagcaacactccccctcaagtgtaagtccatctattcatcatg 45122961  T
Q  106 ctcctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcg 204  Q
     ||| || |||||||||||||| |||||||||||||||   |||| ||||||||  || ||||||| |||||   |||||| |||||| |||||||||||    
T  45122960 ttcccccttcaagcggaagctc-ttacttgcttgtatcgtcgttgctggtttctctgc-aacggacagacac---tgtaccaccgttgttgctttctgcg 45122866  T
Q  205 caaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagt-----cagggggaccgcccacatc 299  Q
    ||||||||| |||| ||||| ||| ||||||||| ||||  | |||||||||||||||||||||||  | ||||||     ||||||||||  |||||||    
T  45122865 caaacggactggctgcctcggtcgtacccttcgtcgaactag-gctctgatgccactgtttggtcatggggggagtcgggccagggggaccttccacatc 45122767  T
Q  300 gaggctagaacaac 313  Q
    |||||| |||||||    
T  45122766 gaggcttgaacaac 45122753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 8 - 313
Target Start/End: Original strand, 8918870 - 8919173
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    ||||||||||||||||||  |||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||      
T  8918870 gtgttcaacctttactctgctatctgatgtgggacatgtaactcacacttgcacacaacaacactccccctcaagtgtgagtccatctattcatcatgtc 8918969  T
Q  108 cctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcgca 206  Q
    || | | |||||||||||| | ||||||||||||| | |||| || ||||||||||||||||| |||||  | ||||||| ||||||| |||| ||| ||    
T  8918970 cccctttaagcggaagctc-taacttgcttgtatcgccgttgctgatttcttcgcaaacggaccgacactgtctgtaccgtcgttgctactttatgcaca 8919068  T
Q  207 aacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggcta 306  Q
    | |||||||||| ||||| ||  |||||||||||||| ||| ||||||| ||| ||||  |||| || ||||  | ||||||||| ||||||||| ||||    
T  8919069 atcggaccggctacctcggtcatacccttcgttgaacggga-ctctgataccattgttgagtca-cgagggaagctgggggaccgtccacatcgaagcta 8919166  T
Q  307 gaacaac 313  Q
    |||||||    
T  8919167 gaacaac 8919173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 9 - 270
Target Start/End: Complemental strand, 147880 - 147623
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc 108  Q
    |||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  147880 tgttcaacatttacttttttatcagatgtgggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcaattcatca-gctc 147782  T
Q  109 ctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcgca 206  Q
    | || | |||||||||||     ||| ||||||||   ||||||||||||| ||||||||||| |||||   ||||||||| ||||||||||||||||||    
T  147781 cccctttaagcggaagct-----cttacttgtatcgtcgttgttggtttctccgcaaacggaccgacactgcttgtaccgctgttgctgctttctgcgca 147687  T
Q  207 aacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtca 270  Q
    ||||||| |||| ||||||||| |||||| || ||||||| ||||||||  ||||||| |||||    
T  147686 aacggactggctgcctcgatcgtaccctttgtcgaaccggggctctgatatcactgttgggtca 147623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 6 - 208
Target Start/End: Complemental strand, 40518636 - 40518437
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| || |||| ||||| |||||||||||||||||||| |||||| |   ||||||||||||||||||||||||  |||||||||    
T  40518636 aggtgttcaacctttacttttctatctgatgtgggacatataactcacacttgaacacaata---ctccccctcaagtgtgagtccatcaattcatcatg 40518540  T
Q  106 ctcctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcg 204  Q
    |||| || ||||| |||||||||| |||||||||||||   |||| |||||||| ||||||||||| ||||  ||||||||||||||||| || ||||||    
T  40518539 ctcccccctcaagtggaagctctt-acttgcttgtatcgtcgttgctggtttctccgcaaacggaccgacatgtttgtaccgccgttgctactctctgcg 40518441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 9309409 - 9309321
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9309409 aggtgttcaacatttactcttttatccgatgtgggacatataactcacacttgcacacaacaacactccccctcaattgtgagtccatc 9309321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 30359663 - 30359540
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||| |||||||||||||| |||||  ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||  || ||||||    
T  30359663 aggtgttcaacttttactcttttatctgatgtgagacatataactcacacttgtacacaacaacattccccctcaagtgtgagtccatcaatttatcatg 30359564  T
Q  106 ctcctcc-tcaagcggaagctctt 128  Q
    |||| || ||||||||||||||||    
T  30359563 ctcccccttcaagcggaagctctt 30359540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 1013976 - 1014096
Alignment:
Q  7 ggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgc 106  Q
    |||||||||| |||||| ||||||||||||| | |||||||||||||||||||| ||  |||||||||||||||||||||||||||||  |||||||| |    
T  1013976 ggtgttcaacttttactattttatccgatgtggaacatataactcacacttgcaaac--caacactccccctcaagtgtgagtccatcaattcatcatac 1014073  T
Q  107 tcctcc-tcaagcggaagctctt 128  Q
    ||| || ||||||||||||||||    
T  1014074 tcccccttcaagcggaagctctt 1014096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 6731953 - 6731857
Alignment:
Q  11 ttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcc 109  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||  || |||||||||||||||||| ||||||||||||| |||||||||||||    
T  6731953 ttcaacctttactattttatccgatgtgggacatataactcacacttg--caaaacaacactccccctcaaatgtgagtccatctattcatcatgctcc 6731857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 18372360 - 18372483
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||   ||||||||||||||||||||||||||||||||||  || ||| ||    
T  18372360 aggtgttcaacctttactattttatccgatgtgagacatataactcacactt--tcacaacaacactccccctcaagtgtgagtccatcactttatcgtg 18372457  T
Q  106 ctcctcc-tcaagcggaagctcttta 130  Q
    |||| || ||||| ||||||||||||    
T  18372458 ctcccccttcaaggggaagctcttta 18372483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 3670114 - 3669993
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| ||  ||||| |||||||||||||||||||||||  |||||||||    
T  3670114 aggtgttaaacctttactattttatccgatgtgggacatataactcacacttgcaaac--caacagtccccctcaagtgtgagtccatcaattcatcatg 3670017  T
Q  106 ctc-ctcctcaagcggaagctctt 128  Q
    ||| | | |||||| |||||||||    
T  3670016 ctcacccttcaagcagaagctctt 3669993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 167
Target Start/End: Original strand, 18371763 - 18371920
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc 108  Q
    ||||||||||||||| |||||||||||||  |||||||||||  |||||  |||||||| ||||||||||||||||||||||||||  || ||| ||| |    
T  18371763 tgttcaacctttactattttatccgatgtgtgacatataact--cacttctacacaacagcactccccctcaagtgtgagtccatcactttatcgtgccc 18371860  T
Q  109 ctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacg 167  Q
    | || |||||||||||||||||| ||| ||||||| | | || |||||||| ||||||||    
T  18371861 ccccttcaagcggaagctctttatttgtttgtatcgccgctgctggtttctccgcaaacg 18371920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 18372485 - 18372638
Alignment:
Q  16 cctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgc-tcctcctc 114  Q
    |||||||| ||||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||  || ||| ||| ||| | ||    
T  18372485 cctttactattttatccgatgtgggacatataactcacactt--tcacaacaacactccccctcaagtgtgagtccatcactttatcgtgcttccccttc 18372582  T
Q  115 aagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggac 170  Q
    ||| |||||||||||| ||| ||| ||| | | || |||||||| |||||||||||    
T  18372583 aaggggaagctctttatttgtttgaatcgccgctgctggtttctccgcaaacggac 18372638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 45121760 - 45121892
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||| |||||||||||||||||||||||||| ||||| | |||||||||||| ||||||||||||||||||| |||||||||||||||  || ||| ||    
T  45121760 aggtgatcaacctttactcttttatccgatgtgggaca-acaactcacacttgtacacaacaacactcccccttaagtgtgagtccatcactttatcgtg 45121858  T
Q  106 ctcctcctcaagcggaagc-tctttacttgcttg 138  Q
    |||| ||   ||||||||| | ||||||||||||    
T  45121859 ctccccccagagcggaagcttttttacttgcttg 45121892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 18372803 - 18372968
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||   |||||||||||| | |||||||||||||||||||  || ||| ||    
T  18372803 aggtgttcaacctttactattttatccgatgtgtgacatataactcacactt--tcacaacaacact-ctcctcaagtgtgagtccatcactttatcgtg 18372899  T
Q  106 ctcctcct--caagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactg 172  Q
    |||| |||   | | |||||||||||| ||| ||||||| | | || |||||||| |||||||||||||    
T  18372900 ctcccccttgaagggggaagctctttatttgtttgtatcgccgctgctggtttctccgcaaacggactg 18372968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 263
Target Start/End: Complemental strand, 9609088 - 9608932
Alignment:
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcgc 205  Q
    |||| |||||||| | ||||||| ||||||||||| | ||  || || ||||| ||||||||||| |||||  ||||||||||||||||||||| |||||    
T  9609088 ctccccctcaagcagtagctctt-acttgcttgtaccgctaatgctgctttctgcgcaaacggaccgacacgcttgtaccgccgttgctgctttatgcgc 9608990  T
Q  206 aaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgt 263  Q
    ||||||||||| | ||||| ||| |||||| || ||||||| || ||||| |||||||    
T  9608989 aaacggaccggtttcctcggtcgtaccctttgtcgaaccggggcactgataccactgt 9608932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 142
Target Start/End: Original strand, 18373035 - 18373171
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| |||||||||| || |||||||||| |||||| || |||||||||||||||  ||||||||||||||||||  || ||| ||    
T  18373035 aggtgttcaacctttactattttatccgaagtgggacatataaatcacac-tgtacacaacaacactccatctcaagtgtgagtccatcactttatcgtg 18373133  T
Q  106 ctcctcc-tcaagcggaagctctttacttgcttgtatc 142  Q
    |||| || ||||| |||||||||| | ||| |||||||    
T  18373134 ctcccccatcaaggggaagctcttcatttgtttgtatc 18373171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 34835263 - 34835165
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||| |||| ||||| ||||||||||||||||  |||||||||||  |||||||||    
T  34835263 aggtgttcaacctttactattttatcggatgtgggacatataactcacccttgtacacagcaacactccccctcaa--gtgagtccatcaattcatcatg 34835166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 246
Target Start/End: Complemental strand, 45122678 - 45122450
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||||||||  || |||||      |||||||||||||||   ||||||||||||||||||| | ||| |||||||||    
T  45122678 aggtgttcaacctttactattttatccgatgcgggccatat------cacttgcacacaaca---ctccccctcaagtgtgagttcttctattcatcatg 45122588  T
Q  106 ctcctcct-caagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgc 203  Q
    |||| ||| | |||||||||||||      ||||||||  ||||||||||| || ||||||||||| |||||   |||||||| |||| || ||||||||    
T  45122587 ctcccccttccagcggaagctctta-----cttgtatcgatgttgttggttcctccgcaaacggaccgacactgcttgtaccgtcgtttcttctttctgc 45122493  T
Q  204 gcaaacggaccggctccctcgatcgcacccttcgttgaaccgg 246  Q
    || || |||| || | ||||||||| |||||| || |||||||    
T  45122492 gccaatggacaggttgcctcgatcgtaccctttgtcgaaccgg 45122450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 158
Target Start/End: Original strand, 9482708 - 9482854
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||  |||||| ||||||||||||||||||||||  ||||||||| |  ||||   ||    
T  9482708 aggtgttcaacctttactcttttatcccatgtggaacatataact--cacttgtacacaacaacactccccctcaa--gtgagtccaacaattcactgtg 9482803  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttct 158  Q
    | || | |||||||||||||| ||||||||||||||| | |||| ||||||||    
T  9482804 c-ccccttcaagcggaagctc-ttacttgcttgtatcgccgttgctggtttct 9482854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 34835529 - 34835427
Alignment:
Q  6 aggtgttcaacctttactcttttatccg-atgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcat 104  Q
    ||||||| |||||||||| ||||||| | | || ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||  ||||||||    
T  34835529 aggtgttaaacctttactattttatcgggacgtgggacatataactcacccttgtacacagcaacactccccctcaagtgtgagtccatcaattcatcat 34835430  T
Q  105 gct 107  Q
    |||    
T  34835429 gct 34835427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 34835795 - 34835693
Alignment:
Q  6 aggtgttcaacctttactcttttatccg-atgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcat 104  Q
    ||||||| |||||||||| ||||||| | | || ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||  ||||||||    
T  34835795 aggtgttaaacctttactattttatcgggacgtgggacatataactcacccttgtacacagcaacactccccctcaagtgtgagtccatcaattcatcat 34835696  T
Q  105 gct 107  Q
    |||    
T  34835695 gct 34835693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 9483031 - 9483143
Alignment:
Q  128 ttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacaca--tttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcga 225  Q
    |||||||||| |||| | |||| |||||||| ||||||||||| |||||   |||||||||||||||||||||||||||||||||||||| || |||||     
T  9483031 ttacttgcttatatcgccgttgatggtttctccgcaaacggaccgacactgctttgtaccgccgttgctgctttctgcgcaaacggaccgactgcctcgg 9483130  T
Q  226 tcgcacccttcgt 238  Q
    | | |||||||||    
T  9483131 ttgtacccttcgt 9483143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 147505 - 147441
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||    
T  147505 aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttacacgcaacaaca 147441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 3038396 - 3038458
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||    
T  3038396 gtgttcaacctttactattttatccgatgtgggacatataactcacacttgtacacaacaaca 3038458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 6876966 - 6877032
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggac-atataactcacacttgcacacaacaacac 71  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||    
T  6876966 aggtgttcaacctttacttttttatccgatgtgggactatataactcacacttgcacacaacaacac 6877032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 41972212 - 41972151
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||    
T  41972212 aggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacacaaca 41972151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 25561920 - 25561984
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||| | |||||||||    
T  25561920 aggtgttcaacgtttactcttttatccgatgtgggacatataactcacacttgtagacaacaaca 25561984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 30359325 - 30359261
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  30359325 aggtgttcaacatttactcttttatccgatgtgagacatataactcacacttgtacacaacaaca 30359261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 33113475 - 33113535
Alignment:
Q  10 gttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||    
T  33113475 gttcaacctttactattttatccgatgtaggacatataactcaaacttgtacacaacaaca 33113535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 45122161 - 45122220
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaa 65  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||    
T  45122161 aggtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaa 45122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 4154386 - 4154471
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    |||||||||||  ||| || |||| |||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||    
T  4154386 gtgttcaacctccacttttctatctgatgtaggacatataactcacatttgcacacaacaa-tttccccctcaagtgtgagtccatc 4154471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 9608799 - 9608738
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| || |||||||| | |||||||||||||||||||||||||||||    
T  9608799 aggtgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 9608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 34834930 - 34834865
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacac 71  Q
    ||||||| |||||||||| |||||||| |||| |||||||||||||||||||| ||||||||||||    
T  34834930 aggtgtttaacctttactattttatccaatgtgggacatataactcacacttgtacacaacaacac 34834865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 313
Target Start/End: Original strand, 1014141 - 1014274
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    ||||||||||||||| |||||||||||||   |||||||| ||||  ||| ||||||||| ||||||| |||||||| ||||||||   |||| | ||||    
T  1014141 ttgtaccgccgttgcggctttctgcgcaa--cgaccggctgcctcagtcgtacccttcgtcgaaccggggctctgataccactgttgtatcactggggga 1014238  T
Q  279 g-tcagggggaccgcccacatcgaggctagaacaac 313  Q
    | || |||| |||  |||||||||||||||||||||    
T  1014239 gctcgggggaaccatccacatcgaggctagaacaac 1014274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 1514019 - 1514078
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaa 65  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||||    
T  1514019 aggtgttcaacctttactcttttatccgatgtgggatatataactcatacttgtacacaa 1514078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 3669948 - 3669816
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    ||||||||  ||||| |||||||||||||   |||||||| ||||||||| ||||||| |||||  || |||||||| |||| ||| ||||||   ||||    
T  3669948 ttgtaccgttgttgcggctttctgcgcaac--gaccggctgcctcgatcgtacccttcattgaaggggggctctgataccaccgttgggtcacgagggga 3669851  T
Q  279 gtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |  |||||||||  |||||||||||||||||||||    
T  3669850 gctagggggaccatccacatcgaggctagaacaac 3669816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 264
Target Start/End: Original strand, 9482868 - 9483005
Alignment:
Q  128 ttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacaca--tttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcga 225  Q
    ||||||||||||||| | |||| || ||||| ||||||||||| |||||   ||||||||| |||||||  |||||| |||||||||||| || |||||     
T  9482868 ttacttgcttgtatcgccgttgatgctttctccgcaaacggaccgacactgctttgtaccgtcgttgcttttttctgtgcaaacggaccgactgcctcgg 9482967  T
Q  226 tcgcacccttcgttgaaccggagctctgatgccactgtt 264  Q
    ||| ||||||||| ||| ||| |||||||| ||| ||||    
T  9482968 tcgtacccttcgtcgaa-cggggctctgataccattgtt 9483005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 1014349 - 1014403
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  1014349 aggtgttcaacctttactattttatctgatgtatgacatataactcacacttgca 1014403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 3669741 - 3669687
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  3669741 aggtgttcaacctttactattttatctgatgtgggacatataactcacacttgca 3669687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 8794162 - 8794100
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacac 71  Q
    |||||||| |||| |||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  8794162 tgttcaacatttattcttttatccgatgtgagacatataactcacacttgtacacaacaacac 8794100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 30441135 - 30441081
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  30441135 aggtgttcaacctttactattttagccgatgtgggacatataactcacacttgca 30441081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 40579352 - 40579461
Alignment:
Q  113 tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcgcaaacgga 212  Q
    ||||| ||||||| |||||||||| ||||| | |||| |||||||| | |||| |||| |||||  || ||| |||||||||||||||||| ||||||||    
T  40579352 tcaaggggaagct-tttacttgctcgtatctccgttgatggtttctccacaaaaggaccgacacgcttttacggccgttgctgctttctgcacaaacgga 40579450  T
Q  213 ccggctccctc 223  Q
    |||||| ||||    
T  40579451 ccggctgcctc 40579461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 45122016 - 45122070
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcaca 62  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  45122016 gtgttcaacctttactattttatgcgatgtgggacatataactcacacttgcaca 45122070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 9309030 - 9308970
Alignment:
Q  9 tgttcaacctttactcttttatccgatgt--aggacatataactcacacttgcacacaaca 67  Q
    |||||||| |||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  9309030 tgttcaacttttactcttttatctgatgtgtaggacatataactcacacttgcacacaaca 9308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 5915907 - 5915863
Alignment:
Q  25 ttttatccgatgtaggacatataactcacacttgcacacaacaac 69  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  5915907 ttttatccaatgtaggacatataactcacacttgcacacaacaac 5915863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 25561748 - 25561792
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataact 50  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  25561748 aggtgttcaacctttactcttttatccgatgtgggacatataact 25561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 32640634 - 32640694
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaac 69  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||| ||| |||||||    
T  32640634 tgttcaacctttactcttttatccgatgtgagacagataactcacacttccacgcaacaac 32640694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 3038099 - 3038201
Alignment:
Q  74 cccctcaagtgtgagtccatcttttcatcatgctcctcctcaagcggaagctctttacttgc-ttgtatcactgttgttggtttcttcgcaaacggactg 172  Q
    ||||| |||||||||||||||  ||||||  ||||| |||||||||||||||| |||||||| ||||||| | |||| |||||||| | ||||||||| |    
T  3038099 cccctaaagtgtgagtccatcaattcatcgagctccccctcaagcggaagctc-ttacttgctttgtatcgccgttgctggtttctcctcaaacggaccg 3038197  T
Q  173 acac 176  Q
    ||||    
T  3038198 acac 3038201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 41416275 - 41416322
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcac 53  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  41416275 aggtgttcaacctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 43274708 - 43274759
Alignment:
Q  43 atataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  43274708 atataactcacacttgtacacaacaacactgtccctcaagtgtgagtccatc 43274759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 37544596 - 37544658
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||| |||||||||||||  ||| |||||||||||||||  ||||||||||    
T  37544596 gtgttcaacctttactattttatccgatgtgcgacttataactcacacttgtgcacaacaaca 37544658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 70381 - 70441
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||| |||||||||||||||||||| |||||||||||||||  ||| |||||||||||    
T  70381 tgttcaacatttactcttttatccgatgtgggacatataactcac-tttgtacacaacaaca 70441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 4154772 - 4154831
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||  ||| || |||| ||||| |||||||||||||||||||||||||||||    
T  4154772 gtgttcaacctccacttttctatcagatgtgggacatataactcacacttgcacacaaca 4154831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 5420702 - 5420643
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    ||||||||||||||| || |||||||||| ||||||||||  |||||||||| |||||||    
T  5420702 tgttcaacctttactattctatccgatgtgggacatataatacacacttgcatacaacaa 5420643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 20995507 - 20995566
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||  ||| ||||||| |||||  ||||||||||||||||||||||||||||    
T  20995507 gtgttcaacctccacttttttatctgatgtgagacatataactcacacttgcacacaaca 20995566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 34835112 - 34835046
Alignment:
Q  204 gcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcac 271  Q
    ||||||||||||||| ||||| ||| ||||||||| ||||||| |||||||| |||||||| ||||||    
T  34835112 gcaaacggaccggctgcctcggtcgtacccttcgtcgaaccgg-gctctgataccactgttgggtcac 34835046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 43274888 - 43274947
Alignment:
Q  11 ttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||||||||| |||||   |||||||||||||||||  |||||||||||    
T  43274888 ttcaacctttactcttttatctgatgtgaaacatataactcacacttatacacaacaaca 43274947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 6651552 - 6651476
Alignment:
Q  11 ttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtcc 91  Q
    ||||||||||||| |||||||||||||  |||||||||||  ||||||  || ||||||||  ||||||||||||||||||    
T  6651552 ttcaacctttactattttatccgatgtgagacatataact--cacttg--caaaacaacacctcccctcaagtgtgagtcc 6651476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 9309243 - 9309110
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    |||| ||| ||||| |||||||| ||||| | |||||||  ||||| ||| ||||| ||| |||| || | |||||| ||||| || |||||| | ||||    
T  9309243 ttgtgccgtcgttgttgctttctacgcaa-ctgaccggcggcctcggtcgtaccctccgtcgaactggggttctgataccacttttgggtcactggggga 9309145  T
Q  279 gtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |   ||||||||| |||||||||||||||||||||    
T  9309144 gctcgggggaccgtccacatcgaggctagaacaac 9309110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 18380121 - 18380171
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacact 56  Q
    |||||||||||||||||| |||||| |||||| ||| ||||||||||||||    
T  18380121 aggtgttcaacctttactattttattcgatgtgggatatataactcacact 18380171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 20130503 - 20130454
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacac 55  Q
    ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  20130503 aggtgttcaacttttactcttttatccgatgtgagacatatatctcacac 20130454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 40518125 - 40518061
Alignment:
Q  6 aggtgttcaacctttactctttt--atccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||||||||||||||||| ||||  |||| |||| | |||||||||||||||||| |||||||||    
T  40518125 aggtgttcaacctttacttttttttatccaatgtggaacatataactcacacttgaacacaacaa 40518061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 12283922 - 12283867
Alignment:
Q  11 ttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaac 66  Q
    |||||| |||||| ||||||| || || |||||||||||| |||||||||||||||    
T  12283922 ttcaacatttacttttttatctgacgtgggacatataacttacacttgcacacaac 12283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 18645713 - 18645752
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  18645713 tatccgatgtgagacatataactcacacttgcacacaaca 18645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 313
Target Start/End: Complemental strand, 40518293 - 40518200
Alignment:
Q  220 cctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggg-agtcagggggaccgcccacatcgaggctagaacaac 313  Q
    ||||| ||| ||||||||| |||| || |||||||| ||| ||||||||||||| ||| ||   ||||||||| ||||||| |||||||||||||    
T  40518293 cctcggtcgtacccttcgtcgaacggg-gctctgataccattgtttggtcaccggggggagctcgggggaccgtccacatcaaggctagaacaac 40518200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 5274827 - 5274770
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaa 65  Q
    ||||||||||| | || |||||| | |||||| |||||||||||| ||||||||||||    
T  5274827 gtgttcaacctctccttttttattcaatgtagaacatataactcatacttgcacacaa 5274770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 9483291 - 9483320
Alignment:
Q  6 aggtgttcaacctttactcttttatccgat 35  Q
    ||||||||||||||||||||||||||||||    
T  9483291 aggtgttcaacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 32305644 - 32305604
Alignment:
Q  275 gggagtcagggggaccgcccacatcgaggctagaacaactg 315  Q
    ||||||||||||||||| ||||||| ||| |||||||||||    
T  32305644 gggagtcagggggaccgtccacatcaaggttagaacaactg 32305604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 126; Significance: 6e-65; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 6 - 313
Target Start/End: Complemental strand, 5831 - 5526
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||    
T  5831 aggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcaattcatcttg 5732  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcg 204  Q
    |||| ||||||||||||||||||   |||| ||| || | |||  ||||||||  |||||||||| |||||   ||| ||||||||||||||||||||||    
T  5731 ctccccctcaagcggaagctcttactttgcatgtgtcgccgttactggtttctctgcaaacggaccgacactgcttgcaccgccgttgctgctttctgcg 5632  T
Q  205 caaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggc 304  Q
    ||||||||||| || ||| |||| |||||||||| |||| |  |||||||| ||||| || |||||| | |||||    |||| ||| ||||||||||||    
T  5631 caaacggaccgactgcctggatcacacccttcgtcgaacag--gctctgataccactattgggtcactgagggagctttggggtccg-ccacatcgaggc 5535  T
Q  305 tagaacaac 313  Q
    | |||||||    
T  5534 ttgaacaac 5526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 5450 - 5386
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5450 aggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcacacaacaaca 5386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 7554079 - 7553848
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||    
T  7554079 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcaattcatcgtg 7553980  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcg 204  Q
    |||| ||||||||||||||||||   |||| ||| || | |||| ||||||||  ||||||||||  ||||   ||| |||||| |||||||||||||||    
T  7553979 ctccccctcaagcggaagctcttactttgcatgtgtcgccgttgctggtttctctgcaaacggaccaacactgcttgcaccgccattgctgctttctgcg 7553880  T
Q  205 caaacggaccggctccctcgatcgcacccttc 236  Q
    ||||||||||| || |||| ||||||||||||    
T  7553879 caaacggaccgactgcctcaatcgcacccttc 7553848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 10 - 269
Target Start/End: Original strand, 40094502 - 40094752
Alignment:
Q  10 gttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcc 109  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||   |||||||||| ||| |||||||||||||||| ||||||| ||||     
T  40094502 gttcaacctttactcttttatctgatgttggacatataactcacacttgcac---acaacactcctcctaaagtgtgagtccatctattcatcacgctct 40094598  T
Q  110 tcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcgcaaac 209  Q
     |||||||||||||||| |||||||||||||||  ||||| |||||| | ||| ||| ||| |||||   ||||||||||||||| ||||||||||||||    
T  40094599 ccctcaagcggaagctc-ttacttgcttgtatcgttgttgctggtttatccgc-aacagaccgacac---tgtaccgccgttgctactttctgcgcaaac 40094693  T
Q  210 ggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtc 269  Q
    ||||||||| ||||| ||| ||||||||| |||| || |||||||| |||||||| ||||    
T  40094694 ggaccggctgcctcggtcgtacccttcgtcgaacagg-gctctgataccactgttaggtc 40094752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 30244755 - 30244619
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc-ttttcatcat 104  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30244755 aggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatctttttcatcat 30244656  T
Q  105 gctcctcctcaagcggaagctctttacttgcttgtatc 142  Q
    ||||| | | |||||||||||| |||||||||||||||    
T  30244655 gctccccttgaagcggaagctc-ttacttgcttgtatc 30244619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 30245548 - 30245385
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc-ttttcatcat 104  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||| || ||||||||||    
T  30245548 aggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaacagtccccctcaagtgtgtgtccgtctttttcatcat 30245449  T
Q  105 gctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacgga 169  Q
    ||||| |||||||||||||||| ||||||||||||||| | |||| || | ||| ||||||||||    
T  30245448 gctccccctcaagcggaagctc-ttacttgcttgtatcgccgttgctgctctctgcgcaaacgga 30245385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 6 - 270
Target Start/End: Complemental strand, 45434690 - 45434427
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||||| |||||||||||  ||||| ||||||||||||| ||  |||||||||    
T  45434690 aggtgttcaacctttacttttttatccgatgtgggacatataacttacacttgtacacaacaaca--cccccccaagtgtgagtccttcaattcatcatg 45434593  T
Q  106 ctcctcc-tcaagcggaagc-tctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctg 202  Q
    |||| || |||||||||||| | |||||||||||||||| | |||| | |||||| ||||||| ||| ||||| | ||||| || |||||||||||| ||    
T  45434592 ctcccccttcaagcggaagcttttttacttgcttgtatcgccgttgctagtttctccgcaaacagaccgacactacttgtatcgtcgttgctgctttatg 45434493  T
Q  203 cgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtca 270  Q
    || |||||||| |||| ||||| ||| |||||| || ||||||| |||| ||| |||||||| |||||    
T  45434492 cggaaacggactggctacctcg-tcgtaccctttgtcgaaccgg-gctccgataccactgttgggtca 45434427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 48243218 - 48243415
Alignment:
Q  43 atataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcctcct-caagcggaagctctttacttgcttgtat 141  Q
    |||||||||| ||||| |||||||||||||||||||||||||||| ||||||  ||||||||||||| ||| |||| ||||| |||| ||||||||||||    
T  48243218 atataactcagacttgtacacaacaacactccccctcaagtgtgaatccatcaattcatcatgctcccccttcaagtggaagttctt-acttgcttgtat 48243316  T
Q  142 cactgttgttggtttcttcgcaaacggactgacaca--tttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgt 238  Q
    | | |||| |||||||| ||| |||| || |||||   ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  48243317 cgccgttgctggtttctccgccaacgaaccgacactgctttgtaccgccgttgctgctttctgcgcaaacggaccggctgcctcggtcgtacccttcgt 48243415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 9 - 313
Target Start/End: Original strand, 1085355 - 1085645
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataa-ctcacacttgcacacaacaacactccccctcaagtgtga--gtccatcttttcatcatg 105  Q
    |||||||| |||||| ||||||||||| | ||||||| || |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  1085355 tgttcaacttttactattttatccgatatgggacataaaaactcacacttgcacacaacaacactccccttcaagtgtgagtgtccatcttttcatcatg 1085454  T
Q  106 ct-cctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcg 204  Q
    || || | ||||| |||||||| ||||||||||||||| |||||| |||||||| ||||||||||| ||||                 || |||||||||    
T  1085455 ctaccccttcaaggggaagctc-ttacttgcttgtatcgctgttgctggtttctccgcaaacggaccgaca-----------------ctactttctgcg 1085536  T
Q  205 caaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggc 304  Q
    |||| ||||||||| ||||| ||  ||||||| | ||||||| ||| |||| |||||||| |||||    ||||| ||||||||||| ||||||||||||    
T  1085537 caaatggaccggctgcctcggtcatacccttcatcgaaccggggctatgataccactgttgggtcatgaggggagccagggggaccgtccacatcgaggc 1085636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 30244324 - 30244204
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||  ||||||||    
T  30244324 aggtcttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaacactccccctcaagtgtgagttcatctagtcatcatg 30244225  T
Q  106 ct-cctcctcaagcggaagct 125  Q
    || |||| |||||||||||||    
T  30244224 ctccctcttcaagcggaagct 30244204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 30245131 - 30245028
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||    
T  30245131 aggtgttcaacctttactcttttatccgatgtggaacatataactcacacttgtacacaacaacactccccctcaagtgcgagtccatctaatcatcatg 30245032  T
Q  106 ctcc 109  Q
    ||||    
T  30245031 ctcc 30245028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 30255393 - 30255308
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtcc 91  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30255393 aggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaacaacactccccctcaagtgtgagtcc 30255308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 22566766 - 22566901
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||| |||| |||  || ||| ||    
T  22566766 aggtgttcaacctttactcttttatccgatgtgggacatattactcacacttgcatacaacaacactccccctcaaatgttagtctatcactttatcgtg 22566865  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtat 141  Q
    |||| ||   |||||||||| |||||||||||||||    
T  22566866 ctccccccagagcggaagctttttacttgcttgtat 22566901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 14681564 - 14681442
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||| ||||||||| ||  |||||||||||||||||||||||||||||| |||||||||    
T  14681564 aggtgttcaacctttactattttatctgatgtgggacatataacttacacttgcaaac--caacactccccctcaagtgtgagtccatctattcatcatg 14681467  T
Q  106 ctcctcc--tcaagcggaagctctt 128  Q
    |||| ||  ||||||||||||||||    
T  14681466 ctccccccttcaagcggaagctctt 14681442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 95 - 264
Target Start/End: Complemental strand, 47129441 - 47129272
Alignment:
Q  95 ttttcatcatgctcctcct-caagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacat-ttgtaccgccgttg 192  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||||||    |||| |||||||| ||||||||||| |||||   ||| ||||||||||    
T  47129441 ttttcatcatgctcccccttcaagcggaagctctt-acttgcttgtattgtcgttgctggtttctccgcaaacggaccgacactgcttgcaccgccgttg 47129343  T
Q  193 ctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtt 264  Q
     |||||||| |||||||||||||||| ||||||||||||| ||| | ||| ||| |||||||| ||||||||    
T  47129342 ttgctttctacgcaaacggaccggctgcctcgatcgcaccattcatcgaa-cggggctctgataccactgtt 47129272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 7517634 - 7517570
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7517634 aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaacaaca 7517570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 179 - 313
Target Start/End: Original strand, 37533260 - 37533393
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    |||||||| |||||||||||||| ||||| | |||||||  ||||| ||||||||||||| ||||||| |||||||| |||||||| ||||||   ||||    
T  37533260 ttgtaccgtcgttgctgctttctacgcaa-ctgaccggcggcctcggtcgcacccttcgtcgaaccggggctctgataccactgttgggtcacgagggga 37533358  T
Q  279 gtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |   ||||||||| |||||||||||||||||||||    
T  37533359 gcgcgggggaccgtccacatcgaggctagaacaac 37533393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 179 - 312
Target Start/End: Original strand, 37532907 - 37533039
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    |||||| | |||||||||||||||||||| | |||||||  ||||| ||||||||||||| ||||||| |||||||| |||||||| ||||||  |||||    
T  37532907 ttgtacagtcgttgctgctttctgcgcaa-ctgaccggcggcctcggtcgcacccttcgtcgaaccggggctctgataccactgttgggtcacgatggga 37533005  T
Q  279 gtcagggggaccgcccacatcgaggctagaacaa 312  Q
    |   ||||||||| ||||||||||| ||||||||    
T  37533006 gcgcgggggaccgtccacatcgaggttagaacaa 37533039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 37533114 - 37533200
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    |||||||||||||||||| |||||||| |||| |||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||    
T  37533114 aggtgttcaacctttactattttatccaatgtgggacatataactcacacttgcaaac--caacactccccctcaagcgtgagtccatc 37533200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 1085722 - 1085786
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacact 72  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1085722 gtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacact 1085786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 24177489 - 24177425
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  24177489 aggtgttcagcctttactcttttatccgatgtgggacatataactcatacttgcacacaacaaca 24177425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 41910698 - 41910762
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  41910698 aggtattcaacctttactcttttatccgatgtgggacatataactcacacttacacacaacaaca 41910762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 36109021 - 36109084
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaac 69  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  36109021 aggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaacaac 36109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 22567143 - 22567206
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  22567143 aggtgttcaacctttactcttttatccgatgt-ggacatattactcacacttgcatacaacaaca 22567206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 40094878 - 40094942
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||    
T  40094878 aggtgttgaacctttactcttttattcgatgtgagacatataactcacacttgcacacaacaaca 40094942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 43241549 - 43241485
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||| | ||||||||||||| | ||||||||||||||||||||||||||||||    
T  43241549 aggtgttcaacctttatttttttatccgatgtggaacatataactcacacttgcacacaacaaca 43241485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 45433295 - 45433231
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||| |||||||||||    
T  45433295 aggtgttcaacctttactcttttatccgatgtggatcatataactcacacttgtacacaacaaca 45433231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 36623011 - 36622950
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  36623011 tgtttaacctttactattttatccgatgtgggacatataactcacacttgcacacaataaca 36622950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 23481 - 23545
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| || |||||||||| | |||||||||||||| |||||||||||||||    
T  23481 aggtgttcaacctttactattgtatccgatgtggaacatataactcacaattgcacacaacaaca 23545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 118405 - 118469
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| || |||| ||||| |||||||||||| |||||||||||||||||||    
T  118405 aggtgttcaacctttacttttctatctgatgtgggacatataacttacacttgcacacaacaaca 118469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 164
Target Start/End: Complemental strand, 37345933 - 37345815
Alignment:
Q  43 atataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcctcc-tcaagcggaagctctttacttgcttgtat 141  Q
    |||||||||||||||||||||||||   |||||| |||||||||||| ||||  |||||| |||||| || ||||| ||||||| |||||||||||||||    
T  37345933 atataactcacacttgcacacaaca---ctccccttcaagtgtgagttcatcaattcatcgtgctcccccgtcaagtggaagct-tttacttgcttgtat 37345838  T
Q  142 cactgttgttggtttcttcgcaa 164  Q
    | | |||| || ||||| |||||    
T  37345837 cgccgttgctgctttctccgcaa 37345815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 45754769 - 45754706
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||||    
T  45754769 aggtgttcaacatttactattttatccgatgt-ggacatataactcacacttgtacacaacaaca 45754706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 238
Target Start/End: Original strand, 28300365 - 28300532
Alignment:
Q  69 cactccccctcaagtgtgagtccatcttttcatcatgctcctcc--tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttc-gcaaa 165  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||  ||||||||||||      |||||||||| |   |||| |||||||| | |||||    
T  28300365 cactccctctcaagtgtgagtccatctattcatcatgctcctcctttcaagcggaagc-----ccttgcttgtaacgtcgttgctggtttctccagcaaa 28300459  T
Q  166 cggactgacac-atttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgt 238  Q
     |||| |||||   |||||||| |||||||||||||||||| || |||||| || ||||| ||| |||||||||    
T  28300460 tggaccgacactgcttgtaccgtcgttgctgctttctgcgc-aatggaccgactgcctcggtcgtacccttcgt 28300532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 29157619 - 29157565
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  29157619 aggtgttcaacctttactattttatccggtgtgggacatataactcacacttgca 29157565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 8128545 - 8128606
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||| | || |||||||| | |||||||||||||||||||||||||||||    
T  8128545 aggtgttcaacctttatttttctatccgatatgggacatataactcacacttgcacacaaca 8128606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 45433497 - 45433370
Alignment:
Q  183 accgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccg-tgggagtc 281  Q
    ||||||||||||||||| |||||||||||||| ||| ||||| ||| |||||| || ||||||| ||||||||   ||||   |||||  |  ||||| |    
T  45433497 accgccgttgctgctttatgcgcaaacggaccagctgcctcggtcgtaccctttgtcgaaccgg-gctctgat---actgcagggtcatagaggggagcc 45433402  T
Q  282 agggggaccgcccacatcgaggctagaacaac 313  Q
    |||||||||| |||||||||||||||||||||    
T  45433401 agggggaccgaccacatcgaggctagaacaac 45433370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 45697929 - 45697845
Alignment:
Q  41 acatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcctcctcaagcggaagctctt 128  Q
    |||||||| | ||||||||||||||||   |||| ||||||||||||||  |||| ||||||||||||| | ||||||||||||||||    
T  45697929 acatataaatgacacttgcacacaaca---ctcctcctcaagtgtgagtttatctattcatcatgctccccttcaagcggaagctctt 45697845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 47129145 - 47129084
Alignment:
Q  10 gttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacac 71  Q
    |||||||||||||| |||||||||||||  |||||||||||||||||||  |||||||||||    
T  47129145 gttcaacctttactattttatccgatgtgagacatataactcacacttgtgcacaacaacac 47129084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 16569250 - 16569186
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||| ||||||||||||| || ||||||||||  ||||||||||||||||||||| |||||||||    
T  16569250 aggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaacaaca 16569186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 16596412 - 16596476
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||| ||||||||||||| || ||||||||||  ||||||||||||||||||||| |||||||||    
T  16596412 aggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaacaaca 16596476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 24838806 - 24838870
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||| ||||||  |||||||||||    
T  24838806 aggtgttcaacctttactcttttattcgatgtgagacatataacttacacttatacacaacaaca 24838870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 34218138 - 34218202
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||| |||||||||||||  ||||||||||||||| ||| |||||||||||    
T  34218138 aggtgttcaacatttacttttttatccgatgtgagacatataactcacatttgtacacaacaaca 34218202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 36534888 - 36534952
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||| |||| |||||||||| || |||||||||| | |||||||||||||||||||    
T  36534888 aggtgttcaacctctactgttttatccgaggtgggacatataagttacacttgcacacaacaaca 36534952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 41854688 - 41854625
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||| |||||||||||| ||||    
T  41854688 aggtgttcaacctttactctttta-ctgatgtgggacatataactcatacttgcacacaaaaaca 41854625  T

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Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 36939837 - 36939900
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaac 69  Q
    ||||||||||| |||||| |||||| |||| | |||||||||||||||||||||||| ||||||    
T  36939837 aggtgttcaacttttactattttatacgatttgggacatataactcacacttgcacagaacaac 36939900  T

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Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 37345843 - 37345753
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtca 270  Q
    ||||| ||||||||||||||||| ||| |||||| ||||| ||||||| | |||||||  |||||||| |||||||| |||||||| |||||    
T  37345843 ttgtatcgccgttgctgctttctccgc-aacggatcggctgcctcgattgtacccttcactgaaccggggctctgataccactgttgggtca 37345753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 30245418 - 30245284
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    ||||| ||||||||||||| |||||||||||||| ||||| ||||||||| ||||||   |  | ||| |||||||| |||||||| |||||    ||||    
T  30245418 ttgtatcgccgttgctgctctctgcgcaaacggatcggctgcctcgatcgtacccttttgtcgagcggggctctgataccactgttgggtcataagggga 30245319  T
Q  279 gtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |   ||||||||| |||||| |||||| |||||||    
T  30245318 gcatgggggaccgtccacattgaggcttgaacaac 30245284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 36967335 - 36967397
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||| || ||||||| |||||||||||||  ||||||||||||||||||| |||||||||||    
T  36967335 gtgtttaatctttacttttttatccgatgtgagacatataactcacacttgtacacaacaaca 36967397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 9901695 - 9901635
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||| ||||    
T  9901695 tgttcaacctttactgttttatccgatgt-ggacatataactcacacttatacacaataaca 9901635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 28301647 - 28301708
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    ||||||||| | |||||| || ||||||||||  ||||||||||||||||||||||||||||    
T  28301647 aggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaaca 28301708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 30032621 - 30032557
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||  |||||||||||| |||||| ||||||||||||||||| || || ||||||||    
T  30032621 aggtgttcaacacttactcttttattcgatgtgggacatataactcacacatgtacgcaacaaca 30032557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 40230398 - 40230454
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaa 65  Q
    |||||||| |||||| |||||| |||||| |||||||||||| ||||||||||||||    
T  40230398 tgttcaacttttacttttttattcgatgtgggacatataacttacacttgcacacaa 40230454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 11845245 - 11845198
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcac 53  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||    
T  11845245 aggtgttcaacctttactattttatccgatgtggaacatataactcac 11845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 37533468 - 37533519
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacactt 57  Q
    |||||||||||||||||| |||||| | |||||| |||||||||||||||||    
T  37533468 aggtgttcaacctttactattttattcaatgtagaacatataactcacactt 37533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 19122785 - 19122740
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactca 52  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  19122785 aggtgttcaacctttactattttatccgatgt-ggacatataactca 19122740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 4124217 - 4124293
Alignment:
Q  31 ccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc 108  Q
    |||||||||||||| ||| ||||| ||||||||||||| ||| | | ||||||||||| |||||  ||||||||||||    
T  4124217 ccgatgtaggacatgtaattcacagttgcacacaacaa-acttcacatcaagtgtgagcccatcaattcatcatgctc 4124293  T

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Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 44361567 - 44361616
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacac 55  Q
    ||||||||||| ||||||||||||||||||||  |||||||| |||||||    
T  44361567 aggtgttcaacttttactcttttatccgatgtgagacatatatctcacac 44361616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 6054614 - 6054562
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttg 58  Q
    ||||||||||| |||||| |||||||||||||  ||||||||||| |||||||    
T  6054614 aggtgttcaacatttactattttatccgatgtgagacatataactaacacttg 6054562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 313
Target Start/End: Complemental strand, 30244605 - 30244481
Alignment:
Q  189 gttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcaggggga 288  Q
    ||||||||| ||||||||||||||||| || ||||||||| ||||||   | || ||| ||| |||| ||| |||| |||||    ||||| | | ||||    
T  30244605 gttgctgctctctgcgcaaacggaccgactgcctcgatcgtacccttttgtcaaacggggctttgataccattgttgggtcatgaggggagcctgaggga 30244506  T
Q  289 ccgcccacatcgaggctagaacaac 313  Q
    ||| ||||||||||||| |||||||    
T  30244505 ccgtccacatcgaggcttgaacaac 30244481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 20599358 - 20599304
Alignment:
Q  16 cctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||| ||||||||||| | |||||||||||||||||||  | |||||||||    
T  20599358 cctttacttttttatccgatatgggacatataactcacacttatagacaacaaca 20599304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 30253884 - 30253830
Alignment:
Q  87 agtccatctttt-catcatgctcctcctcaagcggaagctctt-tacttgcttgt 139  Q
    |||||||||||| ||||||||||| |||||| ||||||||||| |||||||||||    
T  30253884 agtccatctttttcatcatgctccccctcaaacggaagctcttatacttgcttgt 30253830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 10342271 - 10342191
Alignment:
Q  47 aactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct-cctcctcaagcggaagctcttt 129  Q
    ||||||||||||||||| |||   ||||||||||||| |||||||  |  ||||||||||| || ||||||| |||||||||||    
T  10342271 aactcacacttgcacaccaca---ctccccctcaagtatgagtccgccaattcatcatgctgccccctcaagtggaagctcttt 10342191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 30253826 - 30253699
Alignment:
Q  186 gccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttc-gttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagg 284  Q
    |||||||||||| ||||| |||||||| ||||| ||| ||||| ||||||  || |||| || |||||||| ||| |||| |||||    ||||| | ||    
T  30253826 gccgttgctgctctctgcacaaacggatcggctgccttgatcgtacccttttgtcgaacggg-gctctgataccattgttgggtcatgaggggagcctgg 30253728  T
Q  285 gggaccgcccacatcgaggctagaacaac 313  Q
    ||||| | ||||||||||||| |||||||    
T  30253727 gggacagtccacatcgaggcttgaacaac 30253699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 207
Target Start/End: Complemental strand, 45697781 - 45697753
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaa 207  Q
    |||||||||||||||||||||||||||||    
T  45697781 ttgtaccgccgttgctgctttctgcgcaa 45697753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 270
Target Start/End: Complemental strand, 45754977 - 45754886
Alignment:
Q  178 tttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtca 270  Q
    ||||||||| | |||||||||||||  ||||||||| |||| ||||| ||  ||||||||  ||| ||| |||||||| |||||||| |||||    
T  45754977 tttgtaccgtctttgctgctttctgtacaaacggactggctgcctcggtcatacccttcgccgaa-cggggctctgataccactgttgggtca 45754886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 6 - 313
Target Start/End: Complemental strand, 7598663 - 7598357
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||||||||    
T  7598663 aggtgttcaacctttacttttttatctgatgtgggacatataactcacacttgcacac--caacactccctctcaagtgtgagtccatctattcatcatg 7598566  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacgga-ctgacac-atttgtaccgccgttgctgctttctgc 203  Q
    | || | ||||||||||||||||||||||||||||||   ||||||||||||| || |||| || |||||||   |||||||| ||||||||||||||||    
T  7598565 ccccccttcaagcggaagctctttacttgcttgtatcgtcgttgttggtttctccgtaaacagacctgacactgcttgtaccgtcgttgctgctttctgc 7598466  T
Q  204 gcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggag-tcagggggaccgcccacatcgag 302  Q
    || |||||||||||| ||||  ||| ||||||||| ||||| | ||| |||| ||| |||| ||||||   ||||| ||| ||||||||  |||||||||    
T  7598465 gc-aacggaccggctacctcagtcgtacccttcgtcgaacctgggctttgataccagtgttgggtcacgaggggagatca-ggggaccgttcacatcgag 7598368  T
Q  303 gctagaacaac 313  Q
    ||| |||||||    
T  7598367 gcttgaacaac 7598357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 6 - 264
Target Start/End: Original strand, 36785667 - 36785925
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  36785667 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacactccccctaaagtgtgagtccatcaattcatcatg 36785766  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcg 204  Q
    |||| |||||||||||||||| ||||||| |||||||   |||| ||||||||  |||||||||  || ||   ||||||||||||||||||||| || |    
T  36785767 ctccccctcaagcggaagctc-ttacttggttgtatcgtcgttgctggtttctctgcaaacggatcgatactgcttgtaccgccgttgctgctttatgtg 36785865  T
Q  205 caaacggaccggct-ccctcgatcgcacccttcgttgaaccggagctctgatgccactgtt 264  Q
    |||||||| || ||  ||||||||| ||||||||| ||| ||| |||||||| ||||||||    
T  36785866 caaacggatcgtctggcctcgatcgtacccttcgtcgaa-cggggctctgataccactgtt 36785925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 25 - 313
Target Start/End: Complemental strand, 3673120 - 3672830
Alignment:
Q  25 ttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct-cctcctcaagcggaag 123  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||| |||| |||||||||||    
T  3673120 ttttatccaatgtgggacatataactcacacttgcacacaacaacactcctcctcaagtgtgagtccatcaattcatcatgctccctcttcaagcggaag 3673021  T
Q  124 ctctttac-ttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcgcaaacggaccggctccc 221  Q
    || ||||| |||| |||||    |||| |||||||| ||||||||||| |||||   ||| |||||||  ||||||||||||||||||||||||||| ||    
T  3673020 ct-tttactttgcatgtattgtcgttgctggtttctccgcaaacggaccgacactgcttgcaccgccgccgctgctttctgcgcaaacggaccggctgcc 3672922  T
Q  222 tcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcac-cgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |||||| |||||||||| ||| ||| ||||||||  ||  ||| ||||||  | ||||| |||||| |||| |||||||||| ||||||||||    
T  3672921 tcgatcacacccttcgtcgaa-cggggctctgataacagcgttgggtcactagggggagccaggggaaccgtccacatcgagactagaacaac 3672830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 38796322 - 38796489
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc-ttttcatcat 104  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38796322 aggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatctttttcatcat 38796421  T
Q  105 gctcctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactg 172  Q
    ||||| || ||||||||||| || |||||||||||||||   |||| |||||||| |||||||||||||    
T  38796422 gctcccccttcaagcggaagatc-ttacttgcttgtatcgtcgttgctggtttctccgcaaacggactg 38796489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 6 - 218
Target Start/End: Original strand, 40679733 - 40679933
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||| ||||| || |||||||| | |||||||||||||||| ||||||||||   ||||||||||||||||||||||||||| |||||||||    
T  40679733 aggtgttcaacccttacttttctatccgatatgggacatataactcacatttgcacacaa---cactccccctcaagtgtgagtccatctattcatcatg 40679829  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcgc 205  Q
    |||| |||||||||||||||     |||||||||||  | |||| |||||||| ||| ||||||| |||||   ||||| ||||||||||||||||||||    
T  40679830 ctccccctcaagcggaagct-----cttgcttgtattgcagttgctggtttctccgc-aacggaccgacac---tgtactgccgttgctgctttctgcgc 40679920  T
Q  206 aaacggaccggct 218  Q
    | |||||||||||    
T  40679921 atacggaccggct 40679933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 6 - 198
Target Start/End: Complemental strand, 42515070 - 42514882
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacata----taactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcat 101  Q
    ||||||| |||||||||| || |||||||||| |||||||    |||||||||| |||||||||||   ||||||||||| ||||||||||||| |||||    
T  42515070 aggtgtttaacctttacttttctatccgatgtgggacatacatataactcacacctgcacacaaca---ctccccctcaaatgtgagtccatctattcat 42514974  T
Q  102 catgctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctt 198  Q
    ||||||||  ||||||||||||||| ||||||||||||||| |||||| |||||||| ||| ||||||| |||||   |||||||||||||||||||    
T  42514973 catgctccctctcaagcggaagctc-ttacttgcttgtatcgctgttgctggtttctccgc-aacggaccgacac---tgtaccgccgttgctgctt 42514882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 29676957 - 29676822
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  || ||| ||    
T  29676957 aggtgttaaacctttactcttttatccgatgtgggacatataactcacacctgcacacaacaacacaccccctcaagtgtgagtccatcactttatcgtg 29676858  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtat 141  Q
    |||| ||   | |||||||| |||||||||||||||    
T  29676857 ctccccccagaccggaagctttttacttgcttgtat 29676822  T

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Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 40733937 - 40733814
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||| || |||||||||||||| |||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  |||||||||    
T  40733937 aggtgttaaatctttactcttttattcgatgtgggacatataactcacacttgtacacaataacactccccctcaagtgtgagtccatcaattcatcatg 40733838  T
Q  106 ctcctcc-tcaagcggaagctctt 128  Q
    |||| || ||||||||||||||||    
T  40733837 ctcccccttcaagcggaagctctt 40733814  T

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Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 6 - 177
Target Start/End: Original strand, 28531418 - 28531584
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||||||| || || |||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||||  |||||||||    
T  28531418 aggtgttcaacctttgcttttctatccgatgtgggacatataactcacacttgcac---acaacactccccctcaagtgtgagtccatcagttcatcatg 28531514  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacaca 177  Q
    |||| | ||||| |||||||  |||||||||||||||   ||||||| ||||| |  |||||||||||||||    
T  28531515 ctcc-cttcaagtggaagct-attacttgcttgtatcgtcgttgttgctttctccataaacggactgacaca 28531584  T

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Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 5542729 - 5542849
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| |||||| |||| | |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||||||||    
T  5542729 aggtgttcaacctttactattttattcgatatgggacatataactcacacttgcaaac--caacactccccctcaagtgtgagtccatctattcatcatg 5542826  T
Q  106 c-tcctcctcaagcggaagctct 127  Q
    | ||| | |||||||||||||||    
T  5542827 cttccccttcaagcggaagctct 5542849  T

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Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 37106242 - 37106156
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  37106242 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac--caacactccccctcaagtgtgagtccatc 37106156  T

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Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 15880317 - 15880233
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtc 90  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  15880317 aggtgttcaacctttactcttttatccgatgtggaacatataactcacacttgtacacaacaacacttccccttaagtgtgagtc 15880233  T

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Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 31468855 - 31468926
Alignment:
Q  11 ttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaag 82  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31468855 ttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacactccccctcaag 31468926  T

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Target: chr2; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 35580532 - 35580650
Alignment:
Q  49 ctcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcctcc-tcaagcggaagctctttacttgcttgtatcactgt 147  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||| ||||| ||||||| |||||||||| ||||    ||    
T  35580532 ctcacacttgcacacaacagcactctccctcaagtgtgagtccatctattcatcatgctcctccttcaaggggaagct-tttacttgctcgtattgtcgt 35580630  T
Q  148 tgttggtttcttcgcaaacg 167  Q
    ||||||||||| ||||||||    
T  35580631 tgttggtttctccgcaaacg 35580650  T

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Target: chr2; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 8 - 313
Target Start/End: Complemental strand, 6422162 - 6421860
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    |||||||||||||||| ||||||| ||||| ||||||      |||| |||||||||| |   ||||||||||||||||||||||||  |||||||||||    
T  6422162 gtgttcaacctttacttttttatctgatgtgggacat------cacatttgcacacaaga---ctccccctcaagtgtgagtccatcaattcatcatgct 6422072  T
Q  108 cctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcgc 205  Q
    || || ||||||||||| | |||||| ||||||||    |||| |||||||| |||||||| || ||||| | |||||||||| ||||| |  |||||||    
T  6422071 cccccttcaagcggaagttttttactagcttgtattgtcgttgctggtttctccgcaaacgaaccgacactacttgtaccgccattgctaccctctgcgc 6421972  T
Q  206 aaacggaccgg----ctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcga 301  Q
    ||||||| |||    || ||||| ||| |||||| || ||||||  ||||| || |||| ||| |||||    |||||   ||||||||| |||||||||    
T  6421971 aaacggatcggttgcctgcctcggtcgtaccctttgtcgaaccgaggctctaataccaccgttgggtcatgaggggagctcgggggaccgtccacatcga 6421872  T
Q  302 ggctagaacaac 313  Q
    ||| ||||||||    
T  6421871 ggccagaacaac 6421860  T

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Target: chr2; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 40733571 - 40733487
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtc 90  Q
    ||||||||||| |||||| ||||||| ||||| |||||||||||||||||||| |||||| |||||| |||||||||||||||||    
T  40733571 aggtgttcaacatttacttttttatctgatgtgggacatataactcacacttgtacacaataacacttcccctcaagtgtgagtc 40733487  T

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Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 6421439 - 6421369
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactcccc 76  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||    
T  6421439 aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtgcacaacaacacccccc 6421369  T

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Target: chr2; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 14745401 - 14745518
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc 108  Q
    ||||||||| ||||| |||||| |||||| |||||||||||||||| ||||| ||  ||||||| |||||||||| ||||| ||||| ||||||||||||    
T  14745401 tgttcaaccattactattttattcgatgtgggacatataactcacagttgcaaac--caacact-cccctcaagtttgagtacatctattcatcatgctc 14745497  T
Q  109 ctcc-tcaagcggaagctctt 128  Q
    | || ||||||||||||||||    
T  14745498 ccccttcaagcggaagctctt 14745518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 16542503 - 16542438
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacac 71  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  16542503 aggtgttcaacctttactattttatccgatgtgggacttataactcacacttgcacacaacaacac 16542438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 36178373 - 36178459
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    |||||||| ||||||||| |||||||||| || |||||||||||||||||||||| ||  ||||| |||||||||||||||||||||||    
T  36178373 aggtgttccacctttactattttatccgaagtgggacatataactcacacttgcaaac--caacagtccccctcaagtgtgagtccatc 36178459  T

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Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 6421352 - 6421289
Alignment:
Q  12 tcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccc 75  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||    
T  6421352 tcaacctttactcttttatccgatgtgggacatataacttacacttgtacacaacaacactccc 6421289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 30323485 - 30323395
Alignment:
Q  39 ggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcct-cctcaagcggaagctcttt 129  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||| | ||||||||||| |||||||    
T  30323485 ggacatataacacacacttgcacacaacaat-ctccccctcaagtgtgagtccatcaattcatcatgctcatccctcaagcggatgctcttt 30323395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 313
Target Start/End: Complemental strand, 6421690 - 6421514
Alignment:
Q  135 cttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcaccct 234  Q
    ||||||||  ||||| |||||||| ||||||||||| |||||  |||||| | |||||||||||||||| ||||| || | ||||||||  ||| |||||    
T  6421690 cttgtatcgttgttgctggtttctccgcaaacggaccgacacgcttgtactgtcgttgctgctttctgcacaaacaga-cagctccctcagtcgtaccct 6421592  T
Q  235 tcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    | || ||| ||| |||||||| |||||||| ||||||   |||||   ||||||||| |||||||||| ||||||||||    
T  6421591 ttgtcgaa-cggtgctctgataccactgttgggtcacgaggggagctcgggggaccgtccacatcgagactagaacaac 6421514  T

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Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 30313230 - 30313109
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    |||||||||||  ||| || ||||||||||  |||||||||| ||| ||||||||||||||  || ||||||||||||||||||| |  |||||||||||    
T  30313230 gtgttcaacctccacttttctatccgatgtgagacatataacacacgcttgcacacaacaa-tcttcccctcaagtgtgagtccaacaattcatcatgct 30313132  T
Q  108 c-ctcctcaagcggaagctcttt 129  Q
    | | |||||||||||||||||||    
T  30313131 cacccctcaagcggaagctcttt 30313109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 41678510 - 41678595
Alignment:
Q  43 atataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc-ctcctcaagcggaagctcttta 130  Q
    |||||||||||||||||||||||   |||||||| |||||||||||||||||  ||||| |||||| ||||||||||||||||||||||    
T  41678510 atataactcacacttgcacacaa---cactccccttcaagtgtgagtccatcaattcataatgctctctcctcaagcggaagctcttta 41678595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 37632709 - 37632762
Alignment:
Q  14 aacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37632709 aacctttactattttatccgatgtaggacatataactcacacttgcacacaaca 37632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 38796724 - 38796788
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||| | ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  38796724 aggtgttcaacctttattgttttatcagatgtgggacatataactcacacttgcacacaacaaca 38796788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 36178709 - 36178763
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  36178709 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 36178763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 962652 - 962591
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||||    
T  962652 aggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcatacaaca 962591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 1769946 - 1769889
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacac 63  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  1769946 aggtgttcaacttttactcttttatccgatgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 42514703 - 42514642
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| || |||| |||||||||||||||||||||||||||| ||||||    
T  42514703 aggtgttcaacctttacttttctatctgatgtaggacatataactcacacttgcatacaaca 42514642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 31899530 - 31899594
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||| ||||||||||||| | ||||||||||||||||| ||||||||||||    
T  31899530 aggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaacaaca 31899594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 40734299 - 40734231
Alignment:
Q  39 ggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||  |||||| ||||    
T  40734299 ggacatataactcacacttgtacacaataacactccccctcaagtgtgattccatcaattcatcgtgct 40734231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 313
Target Start/End: Original strand, 35580670 - 35580753
Alignment:
Q  230 acccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    ||||||||| ||||||| |||||||| ||| | || |||||  | ||||||||||||||||| |||||||||||||||||||||    
T  35580670 acccttcgtcgaaccggggctctgataccattattgggtcattgggggagtcagggggaccgtccacatcgaggctagaacaac 35580753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 35580827 - 35580886
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaa 65  Q
    ||||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||    
T  35580827 aggtgttcaacatttattgttttatccgatgtgggacatataactcacacttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 37106140 - 37106053
Alignment:
Q  226 tcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    ||||||||||||| ||||||| |||||||| |||||||| ||||||   |||||   ||||||||| |||||||||||||||||||||    
T  37106140 tcgcacccttcgtcgaaccggggctctgataccactgttgggtcacaaggggagctcgggggaccgtccacatcgaggctagaacaac 37106053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 5543102 - 5543156
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  5543102 aggtgttcaacctttactattttatcggatgtgggacatataactcacacttgca 5543156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 6713030 - 6712964
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacact 72  Q
    ||||||||||| |||||| |||||||||||||  ||||||||||||||||||| | |||||||||||    
T  6713030 aggtgttcaacatttactgttttatccgatgtgagacatataactcacacttgtatacaacaacact 6712964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 12529133 - 12529195
Alignment:
Q  7 ggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaac 69  Q
    ||||||||| ||||||| ||||||  |||||||||||||||||||||||||||| ||||||||    
T  12529133 ggtgttcaatctttactgttttatttgatgtaggacatataactcacacttgcatacaacaac 12529195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 14745771 - 14745825
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  14745771 aggtgttcaacctttactattttatccaatgtgggacatataactcacacttgca 14745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 37105978 - 37105924
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  37105978 aggtgttcaacctttactattttattcgatgtgggacatataactcacacttgca 37105924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 41283579 - 41283633
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  41283579 aggtgttcaacctttactattttatccgatatgggacatataactcacacttgca 41283633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 28254344 - 28254405
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||| || |||||||||| |||||||||| ||||||| |||||||||||||    
T  28254344 tgttcaacctttacttttctatccgatgtgggacatataagtcacactggcacacaacaaca 28254405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 15511601 - 15511661
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||| |||  |||||||||||  ||||||||||||||||||    
T  15511601 gtgttcaacctttactcttttatccgttgtgtgacatataact--cacttgcacacaacaaca 15511661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 5367509 - 5367448
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    ||||||||||||||| |||||||||||||| | |||||||||  ||||||||| ||||||||    
T  5367509 aggtgttcaacctttgctcttttatccgatctgggacatatatatcacacttgtacacaaca 5367448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 29873644 - 29873728
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc 94  Q
    ||||||||||  ||| || |||| ||||| |||||| |||| ||| ||||||||||||||  ||||||||||||||||||||||||    
T  29873644 tgttcaacctccacttttctatctgatgtgggacatgtaacacacccttgcacacaacaa-tctccccctcaagtgtgagtccatc 29873728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 36005984 - 36006047
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||| || ||| |||||| |||||||||||||||||||| |||||||||||    
T  36005984 aggtgttcaacttttact-ttctattcgatgtgggacatataactcacacttgtacacaacaaca 36006047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 16590940 - 16590881
Alignment:
Q  9 tgttcaacctttactctttt-atccgatgtaggacatataactcacacttgcacacaaca 67  Q
    ||||||||||||||| |||| ||  ||||| |||||||||||||||||||||||||||||    
T  16590940 tgttcaacctttactttttttatttgatgtgggacatataactcacacttgcacacaaca 16590881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 33731702 - 33731636
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactc--acacttgcacacaacaaca 70  Q
    ||||| ||||||||||||||||||||||||||  || |||||||||  ||||||| |||||||||||    
T  33731702 aggtgctcaacctttactcttttatccgatgtgagatatataactcacacacttgaacacaacaaca 33731636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 36178513 - 36178634
Alignment:
Q  190 ttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggac 289  Q
    |||||||||||||||||| | ||||||   ||| | ||||||||||||| ||||||| |||||||| ||||| || ||||| || |||||   ||||||     
T  36178513 ttgctgctttctgcgcaa-ctgaccggtggccttggtcgcacccttcgtcgaaccggggctctgataccactattgggtca-cgagggagcgcgggggat 36178610  T
Q  290 cgcccacatcgaggctagaacaac 313  Q
    || |||||| ||||||||||||||    
T  36178611 cgtccacatagaggctagaacaac 36178634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 37894806 - 37894892
Alignment:
Q  16 cctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||| || ||| | |||| |||||||||||||||| ||||||   |||| ||||||||| |||| ||||||||||| |||||||||    
T  37894806 cctttacttttctattcaatgtgggacatataactcacatttgcac---acaatactcccccttaagtatgagtccatctattcatcatg 37894892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 3672754 - 3672709
Alignment:
Q  25 ttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||| |||||| |||||||||||||| |||||||||||||||||    
T  3672754 ttttattcgatgtgggacatataactcatacttgcacacaacaaca 3672709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 7598282 - 7598225
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacac 63  Q
    ||||||| |||||||||| || ||| |||||||| |||||||| ||||||||||||||    
T  7598282 aggtgttgaacctttacttttctattcgatgtagaacatataattcacacttgcacac 7598225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 313
Target Start/End: Complemental strand, 23346541 - 23346365
Alignment:
Q  137 tgtatcactgttgttggtttcttcgcaaacggactgacacat-ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcaccctt 235  Q
    |||||| | |||| |||||||| ||||||| ||| |||||   |||||| ||| ||| ||||||||||||| || |||||||| ||||| ||| |||||     
T  23346541 tgtatcgccgttgctggtttctccgcaaacagaccgacactgcttgtactgccattgttgctttctgcgcagacagaccggctacctcggtcgtacccta 23346442  T
Q  236 cgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |||  |||||| |||||||| ||| |||| |||||    |||||   ||| ||||| ||||||| |||||||||||||    
T  23346441 cgtcaaaccgg-gctctgataccattgttgggtcatgaggggagctcgggcgaccgtccacatctaggctagaacaac 23346365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 29676740 - 29676668
Alignment:
Q  230 acccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgagg 303  Q
    ||||||||||||||||| |||||||| |||||||| |||||| | ||||||   |||||||| |||||||||||    
T  29676740 acccttcgttgaaccggggctctgataccactgttgggtcactg-gggagttccggggaccgtccacatcgagg 29676668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 31259720 - 31259787
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtag---gacatataactcacacttgcacacaacaaca 70  Q
    ||||||| |||||||||||||||||||||||  |   |||||||||||| ||||| ||||||||||||    
T  31259720 aggtgttgaacctttactcttttatccgatgatgtgagacatataactcgcacttacacacaacaaca 31259787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 3673249 - 3673197
Alignment:
Q  261 tgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |||| |||||| | ||||| ||||||||||| |||||||||||||||||||||    
T  3673249 tgttgggtcactgggggagccagggggaccgtccacatcgaggctagaacaac 3673197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 40734146 - 40734090
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcaccctt 235  Q
    ||||||||  |||||||||||||||||||||| ||||||| ||||| ||| ||||||    
T  40734146 ttgtaccgttgttgctgctttctgcgcaaacgaaccggctgcctcggtcgtaccctt 40734090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 33954387 - 33954426
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  33954387 tatctgatgtgggacatataactcacacttgcacacaaca 33954426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 40163477 - 40163520
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataac 49  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  40163477 aggtgttcaacctttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 313
Target Start/End: Complemental strand, 42514860 - 42514778
Alignment:
Q  230 acccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    ||||||||| |||| || |||||||| |||||||| ||||||   |||||   ||||||||| |||||||||||||||||||||    
T  42514860 acccttcgtcgaacagg-gctctgataccactgttgggtcacgaggggagctcgggggaccgtccacatcgaggctagaacaac 42514778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 37895165 - 37895227
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||| |||||| |||| | || |||||||||| |||||||||||||| ||| |||||||||||    
T  37895165 aggttttcaacttttatttttctatccgatgtgggacatataactcaaactcgcacacaacaa 37895227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 38796529 - 38796570
Alignment:
Q  52 acacttgcacacaacaacactccccctcaagtgtgagtccat 93  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||    
T  38796529 acactcgcacacaacaacactcctcctaaagtgtgagtccat 38796570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 29676587 - 29676543
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactca 52  Q
    |||||||| |||||||||||||||| ||||  |||||||||||||    
T  29676587 gtgttcaatctttactcttttatccaatgtgagacatataactca 29676543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 109
Target Start/End: Complemental strand, 34481643 - 34481599
Alignment:
Q  65 acaacactccccctcaagtgtgagtccatcttttcatcatgctcc 109  Q
    ||||||||| ||||||||||||||||||||  ||||||| |||||    
T  34481643 acaacactctccctcaagtgtgagtccatcaattcatcacgctcc 34481599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 36178275 - 36178311
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggac 42  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  36178275 aggtgttcaacctttactattttatccgatgtgggac 36178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 43443108 - 43443148
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||| ||||| |||||||||||| |||||||||||||||||    
T  43443108 tatctgatgtgggacatataacttacacttgcacacaacaa 43443148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 6e-62; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 6 - 313
Target Start/End: Complemental strand, 41157429 - 41157120
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||  || ||| ||    
T  41157429 aggtgttcaacttttactcttttatctgatgtgggacatataactcacacttgcacacaacaatactcccccttaagtgtgagtccatcaatttatcgtg 41157330  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac-atttgtaccgccgttgctgctttctgcg 204  Q
    |||| ||   |||||||||||| |||||| |||||||   ||||||||||||| ||||||||||||||||| | |||||||| ||||| |||||| ||||    
T  41157329 ctcc-cccagagcggaagctctctacttgtttgtatcgtcgttgttggtttctccgcaaacggactgacactacttgtaccgtcgttgttgctttatgcg 41157231  T
Q  205 caaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccg--tgggagtc-agggggaccgcccacatcga 301  Q
    ||||||||||| || ||| | ||| |||||| || ||| ||| |||||||| ||| |||| |||||| |   ||||| |  |||||||||||||||||||    
T  41157230 caaacggaccgactgccttggtcgtaccctttgtcgaa-cggggctctgataccattgttgggtcactgaaggggagccttgggggaccgcccacatcga 41157132  T
Q  302 ggctagaacaac 313  Q
    ||||||||||||    
T  41157131 ggctagaacaac 41157120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 34364979 - 34364816
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatc-ttttcatcat 104  Q
    |||||||||||||||| | |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34364979 aggtgttcaacctttattattttatccgatgtgtgacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatctttttcatcat 34364880  T
Q  105 gctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacgga 169  Q
    ||||| |||||| ||||||||| |||||||||||| || |||||| |||||| | ||||||||||    
T  34364879 gctccccctcaatcggaagctc-ttacttgcttgtgtcgctgttgctggtttttccgcaaacgga 34364816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 9 - 270
Target Start/End: Complemental strand, 37556163 - 37555900
Alignment:
Q  9 tgttcaacctttactctttt-atccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  || ||| |||     
T  37556163 tgttcaacctttactatttttatccgatgtgggacatataactcacacttgtacacaacaacactccccctcaagtgtgagtccatcactttatcctgcc 37556064  T
Q  108 cctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac--atttgtaccgccgttgctgctttctgcg 204  Q
    || || ||||||  |||||| |||||||||| |||| | |||| |||||||| ||||||||||| |||||   |||||||||||||||||||||| ||||    
T  37556063 cccccttcaagctaaagctc-ttacttgcttctatcgccgttgctggtttctccgcaaacggaccgacactgctttgtaccgccgttgctgctttttgcg 37555965  T
Q  205 caaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtca 270  Q
    ||| |||||| ||| ||||||||  ||||||||  |||  || |||||||| |||||||| |||||    
T  37555964 caatcggaccagctgcctcgatcatacccttcgccgaa-tggggctctgataccactgttgggtca 37555900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 313
Target Start/End: Original strand, 22077248 - 22077524
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcctcctcaagcggaagctct 127  Q
    |||||||||| |||||||||||||||||||||||   |||||||||||||||||||||| |||||||| ||||||||||||    ||||||| ||||||     
T  22077248 tatccgatgtgggacatataactcacacttgcac---acaacactccccctcaagtgtgtgtccatctattcatcatgctcgctatcaagcgaaagctc- 22077343  T
Q  128 ttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacatttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatc 227  Q
    ||||||||||||||| | | ||  ||||||| ||| ||| ||| |||||   ||||||| |||||||| ||||| ||| |||||||||||| ||| | ||    
T  22077344 ttacttgcttgtatcgccgctgccggtttctccgc-aacagaccgacac---tgtaccgtcgttgctggtttctccgc-aacggaccggctgccttggtc 22077438  T
Q  228 gcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaacaac 313  Q
    | ||||||||| ||||| | ||||||||||||||||| ||||||   ||||| | ||||||||| ||| ||||| ||| |||||||    
T  22077439 gtacccttcgtcgaacctgggctctgatgccactgttgggtcacaaggggagcctgggggaccgtccatatcgatgcttgaacaac 22077524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 26661626 - 26661749
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||     
T  26661626 aggtgttcaacctttactcttttacccgatgtgggacatataactcacacttgtacacaacaacactcccccttaagtgtgagtccatctattcatcata 26661725  T
Q  106 ctc-ctcctcaagcggaagctctt 128  Q
    ||| | | ||||||||||||||||    
T  26661726 ctctcccttcaagcggaagctctt 26661749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 3537251 - 3537375
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||  |||||| ||    
T  3537251 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac--caacactccccctcaagtgtgagtccatcaattcatcttg 3537348  T
Q  106 ctcctcc-tcaagcggaagctctttac 131  Q
    |||| || |||||||||||||||||||    
T  3537349 ctcccccttcaagcggaagctctttac 3537375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 6 - 142
Target Start/End: Original strand, 22077599 - 22077731
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| || ||||||||||  ||||||||||||||||||||||||||   ||||||||||||||||||||||||| | |||||||||    
T  22077599 aggtgttcaacctttacttttctatccgatgtgagacatataactcacacttgcacacaa---cactccccctcaagtgtgagtccatgtattcatcatg 22077695  T
Q  106 ctcctcctcaagcggaagctctttacttgcttgtatc 142  Q
    |||| | |||||||||||||| ||| |||||||||||    
T  22077696 ctccccatcaagcggaagctc-ttaattgcttgtatc 22077731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 44290565 - 44290683
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc 108  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| ||||||||||||    
T  44290565 tgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac--caacactccccctcaagtgtgagtccatctattcatcatgctc 44290662  T
Q  109 ctcc-tcaagcggaagctctt 128  Q
    | || ||||| ||||||||||    
T  44290663 ccccttcaaggggaagctctt 44290683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 48588592 - 48588713
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| ||  |||||||||||||||||||||||||||||| |||||||||    
T  48588592 aggtgttcaacctttactattttatccgatgtcggacatagaactcacacttgcaaac--caacactccccctcaagtgtgagtccatctattcatcatg 48588689  T
Q  106 ct-cctcctcaagcggaagctctt 128  Q
    || || | ||||||||||||||||    
T  48588690 ctaccccttcaagcggaagctctt 48588713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 6 - 270
Target Start/End: Original strand, 66191 - 66458
Alignment:
Q  6 aggtgttcaa-cctttactcttttatccgatgtaggacat-ataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatca 103  Q
    |||||||||| |||||||| || ||||||||||  ||||| || ||||||||||||||||||||   || |||||||||||||||||||||| |||||||    
T  66191 aggtgttcaaacctttacttttctatccgatgtgagacatgattactcacacttgcacacaaca---cttcccctcaagtgtgagtccatctattcatca 66287  T
Q  104 tgctcctcc-tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacaca-----tttgtaccgccgttgctgct 197  Q
    || ||| || ||||||||||||||||  |||||||||||| | |||| ||| |||| | | || |||||||||||      || ||||||||||| || |    
T  66288 tgttcccccatcaagcggaagctcttatcttgcttgtatcgccgttgctggcttctccac-aagggactgacacaatgagcttataccgccgttgttggt 66386  T
Q  198 ttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtca 270  Q
    |||| ||| |||||||||||| ||||| ||| ||||||||| |||||||  |||||||  ||||||| |||||    
T  66387 ttctccgc-aacggaccggctgcctcggtcgtacccttcgtcgaaccgggactctgatatcactgttgggtca 66458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 77 - 264
Target Start/End: Original strand, 41184198 - 41184386
Alignment:
Q  77 ctcaagtgtgagtccatcttttcatcatgctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacac 176  Q
    ||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||| |||||||   |||| |||||| | ||||||||||| |||||    
T  41184198 ctcaagtgtgagtccatcacttcatcgtgctccccctcaagcggaagctctttacttgtttgtatcgtcgttgctggtttttccgcaaacggaccgacac 41184297  T
Q  177 -atttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtt 264  Q
     | |||||||| | ||| ||||| || |||||||||||||| | ||||| ||  ||||||||| || |  | |||||||| ||||||||    
T  41184298 taattgtaccgtcattgttgcttgctacgcaaacggaccggttgcctcggtcttacccttcgtcgagctcgggctctgataccactgtt 41184386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 313
Target Start/End: Complemental strand, 34649767 - 34649567
Alignment:
Q  113 tcaagcggaagctctttacttgcttgtatcactgttgttggtttcttcgcaaacggactgacacat-ttgtaccgccgttgctgctttctgcgcaaacgg 211  Q
    ||||||| |||||||| |||||||||||||   |||| |||||||| |||||| |||| || ||   |||||||| ||||| ||||||||||||||||||    
T  34649767 tcaagcgaaagctctt-acttgcttgtatcgtcgttgctggtttctccgcaaatggaccgaaactgcttgtaccgtcgttgttgctttctgcgcaaacgg 34649669  T
Q  212 accggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggag-tcagggggaccgcccacatcgaggctagaac 310  Q
    ||||||| ||||| ||| ||||||| | ||| ||| |||||||| |||||||| ||||||   || || || ||||||||| ||||||||||||||||||    
T  34649668 accggctgcctcggtcgtacccttcatcgaa-cggggctctgataccactgttgggtcactagggaagctccgggggaccgtccacatcgaggctagaac 34649570  T
Q  311 aac 313  Q
    |||    
T  34649569 aac 34649567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 50469187 - 50469303
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||||||||||   ||||||||||||||| ||||| |||  |||| |||||||| ||    
T  50469187 gtgttcaacctttactttattatctgatgtaggacatataactcacacttgcac---acaacactccccctc-agtgtcagtttatctattcatcatact 50469282  T
Q  108 cctcctcaagcggaagctctt 128  Q
    ||||||||||| |||||||||    
T  50469283 cctcctcaagcagaagctctt 50469303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 11977334 - 11977251
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagt 89  Q
    ||||||||||| |||||| ||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  11977334 aggtgttcaacatttactgttttacccgatgtgggacatataactcacacttgtacacagcaacactccccctcaagtgtgagt 11977251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 40082461 - 40082398
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaac 69  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  40082461 aggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcgcacaacaac 40082398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 34364561 - 34364496
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacac 71  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  34364561 aggtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaacac 34364496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 17294629 - 17294569
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  17294629 gtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaa 17294569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 29798253 - 29798189
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||    
T  29798253 aggtgttcaacctttactattttatccaatgtaggacatataactcacacttgcatacaacaaca 29798189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 34649492 - 34649428
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||    
T  34649492 aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtatacaacaaca 34649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 41142426 - 41142362
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||    
T  41142426 aggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcacagaacaaca 41142362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 14 - 142
Target Start/End: Original strand, 30630750 - 30630875
Alignment:
Q  14 aacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcctcc- 112  Q
    |||||||| | |||||||||||||  ||||||||| ||||||||||||| ||||   ||||| ||||||||||||||||||  ||||||||||||| ||     
T  30630750 aacctttaattttttatccgatgtgagacatataaatcacacttgcacataaca---ctccctctcaagtgtgagtccatcaattcatcatgctccccct 30630846  T
Q  113 tcaagcggaagctctttacttgcttgtatc 142  Q
    ||||| |||||| | |||||||||||||||    
T  30630847 tcaagaggaagcac-ttacttgcttgtatc 30630875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 34364770 - 34364636
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    ||||| ||||||||||||||||||| ||||||||||||||  || | ||| ||||||||| ||||||| |||||||| |||||||| |||||| | ||||    
T  34364770 ttgtatcgccgttgctgctttctgcacaaacggaccggctgtctgggtcgtacccttcgtcgaaccggggctctgataccactgttgggtcactggggga 34364671  T
Q  279 g-tcagggggaccgcccacatcgaggctagaacaac 313  Q
    | ||| ||| |||  |||||||||||||||| ||||    
T  34364670 gctca-gggaaccatccacatcgaggctagagcaac 34364636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 41184531 - 41184593
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  41184531 gtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaaca 41184593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 50051777 - 50051876
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcctcc-tcaagcggaagctc 126  Q
    |||||||||| |||||||||||||||||||||| ||  ||||| ||||||||||||||||||||||   ||||||||||||| || |||||| |||||||    
T  50051777 tatccgatgtgggacatataactcacacttgcaaac--caacattccccctcaagtgtgagtccattaattcatcatgctcccccttcaagcagaagctc 50051874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 35154150 - 35154207
Alignment:
Q  13 caacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  35154150 caacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaaca 35154207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 31767265 - 31767329
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||||||||||||    
T  31767265 aggtgttcaacctttactgttttatccgatgtggaacatataacccacacttgcacacaacaaca 31767329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 37850704 - 37850768
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||| |||| |||||| |||||| ||||||||||||||||||||||||||||||||    
T  37850704 aggtgttcaacctctactgttttatgcgatgtgggacatataactcacacttgcacacaacaaca 37850768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 41157045 - 41156981
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||||| | | |||||||||| |||||||||||||||||||||    
T  41157045 aggtgttcaacctttactcttttatccgttatgggacatataattcacacttgcacacaacaaca 41156981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 179 - 313
Target Start/End: Original strand, 44290720 - 44290853
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtca-ccgtggg 277  Q
    ||||||| ||||||| |||||||||||||    ||||||| ||||| ||||||||||||| ||||||| |||||||| |||||||| |||||   | |||    
T  44290720 ttgtaccaccgttgcggctttctgcgcaaca--accggctgcctcggtcgcacccttcgtcgaaccggggctctgataccactgttgggtcagtgggggg 44290817  T
Q  278 agtcagggggaccgcccacatcgaggctagaacaac 313  Q
    ||   ||||||||| |||||||||||||||||||||    
T  44290818 agctcgggggaccgtccacatcgaggctagaacaac 44290853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 32594820 - 32594874
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  32594820 aggtgttcaacctttactattttatctgatgtaggacatataactcacacttgca 32594874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 44290929 - 44290983
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  44290929 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 44290983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 45084436 - 45084378
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacaca 64  Q
    |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  45084436 aggtgttcaacctttactgttttatccgatgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 39066304 - 39066369
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacac 71  Q
    |||||||||||||||||| || |||||||||| | | |||||||||||||||||||||||||||||    
T  39066304 aggtgttcaacctttacttttctatccgatgtggaatatataactcacacttgcacacaacaacac 39066369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 26662002 - 26662066
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||||| ||| | ||| |||||||||||||||| |||||||||||    
T  26662002 aggtgttcaacctttactcttttatctgatatgggatatataactcacacttgtacacaacaaca 26662066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 66576 - 66638
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||||||||||||||||| || |||||||| | | ||||||||||||||||||||||||||||    
T  66576 aggtgttcaacctttacttttctatccgatatggaacatataactcacacttgcacacaacaa 66638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 24600421 - 24600479
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    ||||||||||||||| || |||||||| | |||||||||||||||||||||||||||||    
T  24600421 tgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 24600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 47379891 - 47380021
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgct 107  Q
    |||||||||||  ||| || |||||||||| ||| ||||||||||||||||||     |||||||||||||||| ||| |||||| |  |||||| ||||    
T  47379891 gtgttcaacctccacttttctatccgatgtgggatatataactcacacttgcat----caacactccccctcaaatgtaagtccaacaattcatcgtgct 47379986  T
Q  108 -cctcctcaagcggaagctctttacttgcttgtatc 142  Q
     || ||||||||||||| || |||||||||||||||    
T  47379987 cccccctcaagcggaagttc-ttacttgcttgtatc 47380021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 1188391 - 1188482
Alignment:
Q  65 acaacactccccctcaagtgtgagtccatcttttcatcatgctcctcctcaagcggaagctctttacttgcttgtatcactgttgttggtttct 158  Q
    |||||||||  |||||||||||||||||||  ||||||||||||| | ||||| |||||||| |||||||||||| ||| |||||||| |||||    
T  1188391 acaacactcatcctcaagtgtgagtccatcaattcatcatgctcc-cttcaagtggaagctc-ttacttgcttgtgtcaatgttgttgctttct 1188482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 3550774 - 3550721
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgc 59  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  3550774 aggtgttcaacctttactattttatctgatgtgggacatataactcacacttgc 3550721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 38804461 - 38804521
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||||| | |||||||    
T  38804461 gtgttcaacctttactcttttattcgatgtgggacgtataactcacacttgtaaacaacaa 38804521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 50052130 - 50052178
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacactt 57  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  50052130 tgttcaacctttactattttatccgatgtgggacatataactcacactt 50052178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 21378150 - 21378209
Alignment:
Q  11 ttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||||| || |||||||| | |||||||||||| |||||||||||||||||||    
T  21378150 ttcaacctttactgttctatccgatctgggacatataactgacacttgcacacaacaaca 21378209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3537698 - 3537752
Alignment:
Q  1 tcatcaggtgttcaacctttactcttttatccgatgtaggacatataactcacac 55  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||||| ||||    
T  3537698 tcataaggtgttcaacctttactattttatccgatgtgggacatataactaacac 3537752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 3875435 - 3875497
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||||| ||||||||||| |||||||||||||  ||||||||||| || ||||||||||||||    
T  3875435 aggtgtacaacctttacttttttatccgatgtgtgacatataactgactcttgcacacaacaa 3875497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 5320069 - 5320131
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    ||||||||||| |||||| || |||||||||| | |||||||||||||||||||| |||||||    
T  5320069 aggtgttcaacttttacttttctatccgatgtggaacatataactcacacttgcatacaacaa 5320131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 41759537 - 41759483
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    ||||||||||| |||||| |||||||||||||  |||||||||||||||||||||    
T  41759537 aggtgttcaacttttactattttatccgatgtgtgacatataactcacacttgca 41759483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 45494083 - 45494137
Alignment:
Q  7 ggtgttcaacctttactcttttatccgatgtaggacatat-aactcacacttgca 60  Q
    ||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  45494083 ggtgttcaacctttactattttatccgatgtgggacatataaactcacacttgca 45494137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 47380258 - 47380323
Alignment:
Q  42 catataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc 108  Q
    |||||||||||||||||||||||||||  || |||||||||||||| ||||||  ||||||||||||    
T  47380258 catataactcacacttgcacacaacaa-tcttcccctcaagtgtgaatccatcaattcatcatgctc 47380323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 24132089 - 24132150
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||||||||||| || |||||||||  |||||||||||||||| ||||| ||||||    
T  24132089 aggtgttcaacctttacttttctatccgatgagggacatataactcacagttgcatacaaca 24132150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 44685502 - 44685449
Alignment:
Q  14 aacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||||||| || |||||||| | |||||||||||||||||||||||||||||    
T  44685502 aacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 44685449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 5575158 - 5575098
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    ||||||||||||||||||||| ||||||| || |||||||||| |||||  ||||||||||||    
T  5575158 aggtgttcaacctttactcttctatccgacgtgggacatataattcaca--tgcacacaacaa 5575098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 313
Target Start/End: Original strand, 50051921 - 50052053
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtggga 278  Q
    |||||| | |||||| ||||||||| ||| |  ||||||| ||||| |||| ||||| || ||||||| |||||||| |||||||| ||||||   ||||    
T  50051921 ttgtactgtcgttgcggctttctgcccaacc--accggctgcctcggtcgcgccctttgtcgaaccggggctctgataccactgttgggtcacgagggga 50052018  T
Q  279 gtcagggggaccgcccacatcgaggctagaacaac 313  Q
    |   ||||||| | ||||||||||| |||||||||    
T  50052019 gctcgggggactgtccacatcgaggttagaacaac 50052053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 4266888 - 4266934
Alignment:
Q  8 gtgttcaacctttactcttttatccgatgtaggacatataactcaca 54  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||    
T  4266888 gtgttcaacatttactcttttatctaatgtaggacatataactcaca 4266934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 4878854 - 4878796
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    ||||||| ||| ||| ||||||||||||| | |||||||||||||| ||||||||||||    
T  4878854 tgttcaagcttcactattttatccgatgtggaacatataactcacaattgcacacaaca 4878796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 313
Target Start/End: Original strand, 22077752 - 22077858
Alignment:
Q  207 aacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggcta 306  Q
    |||||||||||| ||| | ||  ||||||||| ||||| | ||||||||||||||||| ||||||   ||||| | || |||||| ||||||||| |||     
T  22077752 aacggaccggctgccttggtcatacccttcgtcgaacctgggctctgatgccactgttgggtcacaaggggagcctggaggaccgtccacatcgatgctt 22077851  T
Q  307 gaacaac 313  Q
    |||||||    
T  22077852 gaacaac 22077858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 24448296 - 24448211
Alignment:
Q  41 acatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctcctcctcaagcggaagctcttt 129  Q
    |||||||||| ||||||||||||||||   ||||||||||| |||||| |||||  |||||| ||||   ||||||||| |||||||||    
T  24448296 acatataacttacacttgcacacaaca---ctccccctcaattgtgagcccatcaattcatcgtgctttccctcaagcgaaagctcttt 24448211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 37555779 - 37555721
Alignment:
Q  11 ttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaac 69  Q
    ||||||||| ||| ||||||||||||| |||| ||||||||||||||  ||||||||||    
T  37555779 ttcaaccttcactattttatccgatgtgggacttataactcacacttttacacaacaac 37555721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 5528861 - 5528902
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataact 50  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  5528861 tgttcaacctttactcttttatccgatgtgagacatataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 9955960 - 9955899
Alignment:
Q  8 gtgttcaacctttactctttt-atccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||||||||||||||| |||| ||| ||||| ||||||||||||||||||  ||||||||||    
T  9955960 gtgttcaacctttactttttttatctgatgtgggacatataactcacactaacacacaacaa 9955899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 22793327 - 22793270
Alignment:
Q  11 ttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 68  Q
    |||||||| |||| || ||| |||||| ||||||||||||||||||||| ||||||||    
T  22793327 ttcaacctctacttttctatacgatgtgggacatataactcacacttgctcacaacaa 22793270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 22077935 - 22077991
Alignment:
Q  9 tgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaa 65  Q
    ||||||||||||| | || |||||||| ||  |||||||||||||||||||||||||    
T  22077935 tgttcaacctttatttttctatccgatttaaaacatataactcacacttgcacacaa 22077991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 3537495 - 3537550
Alignment:
Q  77 ctcaagtgtgagtccatcttttcatcatgctcctcc-tcaagcggaagctctttac 131  Q
    ||||||||||||||||||   |||||||||||| || |||||||||||||||||||    
T  3537495 ctcaagtgtgagtccatcaaatcatcatgctcccccttcaagcggaagctctttac 3537550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 310
Target Start/End: Complemental strand, 11977208 - 11977076
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccac--tgtttggtcaccgtg- 275  Q
    |||||||| |||||||||||||||||| ||| ||||| |  ||||| ||| |||||||||  |||||| |||||||||||||  |||| ||||||   |     
T  11977208 ttgtaccgtcgttgctgctttctgcgc-aactgaccgacggcctcggtcgtacccttcgtcaaaccgg-gctctgatgccactttgttaggtcacaaaga 11977111  T
Q  276 ggagtcagggggaccgcccacatcgaggctagaac 310  Q
    ||||   ||||||||| ||||||||||||||||||    
T  11977110 ggagctcgggggaccgtccacatcgaggctagaac 11977076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 19283581 - 19283620
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  19283581 tatccggtgtgggacatataactcacacttgcacacaaca 19283620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 45839675 - 45839617
Alignment:
Q  11 ttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| | || |||||||||| |||||||||||||| ||||| |||||||||||    
T  45839675 ttcaacctttatt-ttctatccgatgtgggacatataactcatacttgtacacaacaaca 45839617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 14318921 - 14318875
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactca 52  Q
    |||||||||||||||||| |||||||||| || | ||||||||||||    
T  14318921 aggtgttcaacctttactattttatccgacgtggaacatataactca 14318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 32168796 - 32168845
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgca 60  Q
    |||||||||||||||||| |||||||||     ||||||||||||||||||||||    
T  32168796 aggtgttcaacctttactattttatccg-----ggacatataactcacacttgca 32168845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 313
Target Start/End: Original strand, 4266798 - 4266827
Alignment:
Q  284 ggggaccgcccacatcgaggctagaacaac 313  Q
    ||||||||||||||||||||||||||||||    
T  4266798 ggggaccgcccacatcgaggctagaacaac 4266827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 255
Target Start/End: Original strand, 48588758 - 48588832
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgat 255  Q
    |||||||| |||||| ||||||||| |||   |||||||| ||||  ||||||||||||| ||||||| ||||||||    
T  48588758 ttgtaccgtcgttgcagctttctgcacaat--gaccggctgcctcagtcgcacccttcgtcgaaccggggctctgat 48588832  T

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Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 1188697 - 1188753
Alignment:
Q  11 ttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaaca 67  Q
    ||||||||  ||| || |||||||| | | |||||||||||||||||||||||||||    
T  1188697 ttcaacctccacttttctatccgatatggaacatataactcacacttgcacacaaca 1188753  T

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Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 4208136 - 4208176
Alignment:
Q  25 ttttatccgatgtaggacatataactcacacttgcacacaa 65  Q
    ||||||| |||||| ||||||||||||||||| ||||||||    
T  4208136 ttttatctgatgtatgacatataactcacactcgcacacaa 4208176  T

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Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Complemental strand, 41157532 - 41157504
Alignment:
Q  285 gggaccgcccacatcgaggctagaacaac 313  Q
    |||||||||||||||||||||||||||||    
T  41157532 gggaccgcccacatcgaggctagaacaac 41157504  T

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Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 261
Target Start/End: Original strand, 48588382 - 48588463
Alignment:
Q  178 tttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccact 261  Q
    |||||| || |||||| |||||||||||||    ||||||| ||||| | |||||||||||||||||||  ||||||| |||||    
T  48588382 tttgtatcgtcgttgcggctttctgcgcaaca--accggctgcctcggttgcacccttcgttgaaccgggactctgataccact 48588463  T

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Target: scaffold0171 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 6 - 111
Target Start/End: Original strand, 17560 - 17665
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17560 aggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatctattcatcatg 17659  T
Q  106 ctcctc 111  Q
    ||||||    
T  17660 ctcctc 17665  T

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Target: scaffold0078 (Bit Score: 76; Significance: 4e-35; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 5411 - 5288
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| || |||||||||| | |||||||||||||||||||||||||||| |||| ||||||||||||||||||||  |||||| ||    
T  5411 aggtgttcaacctttactgttctatccgatgtggaacatataactcacacttgcacacaacaaaactctccctcaagtgtgagtccatcagttcatcgtg 5312  T
Q  106 ctcctcc-tcaagcggaagctctt 128  Q
    |||| || ||||||||||||||||    
T  5311 ctcccccttcaagcggaagctctt 5288  T

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Target: scaffold0078; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 5243 - 5154
Alignment:
Q  179 ttgtaccgccgttgctgctttctgcgcaaacggaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcac 271  Q
    |||||||||||||||||||||||||||||   |||| ||| ||||||||| ||| ||||| ||| ||| ||| ||||||||||||| ||||||    
T  5243 ttgtaccgccgttgctgctttctgcgcaa--cgaccagctgcctcgatcgtacctttcgtcgaa-cggggctgtgatgccactgttgggtcac 5154  T

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Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 5028 - 4972
Alignment:
Q  14 aacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||| || | ||||||||  ||||||||| |||||||||||||||||||||    
T  5028 aacctttactgttctctccgatgtgagacatataattcacacttgcacacaacaaca 4972  T

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Target: scaffold0702 (Bit Score: 69; Significance: 6e-31; HSPs: 3)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 246 - 366
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatg 105  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||  |||||||||||| ||| ||||||||||| | |||||||||    
T  246 aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcaaac--caacactccccc-caaatgtgagtccatttattcatcatg 342  T
Q  106 ctcctcc-tcaagcggaagctctt 128  Q
    |||| || ||||||||||||||||    
T  343 ctcccccttcaagcggaagctctt 366  T

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Target: scaffold0702; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 618 - 682
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  618 aggtgttcaacctttactcttttaaccgatgtgggacatataactcacacttgtgcacaacaaca 682  T

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Target: scaffold0702; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 441 - 539
Alignment:
Q  211 gaccggctccctcgatcgcacccttcgttgaaccggagctctgatgccactgtttggtcaccgtgggagtcagggggaccgcccacatcgaggctagaa 309  Q
    ||||| || ||||| | ||||||||||| ||||||| |||||||| |||||||| |||||| | || ||   ||||||||  |||||||||||||||||    
T  441 gaccgactacctcggttgcacccttcgtcgaaccggggctctgataccactgttgggtcactggggaagctcgggggaccttccacatcgaggctagaa 539  T

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Target: scaffold0113 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 39870 - 39770
Alignment:
Q  28 tatccgatgtaggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcttttcatcatgctc-ctcctcaagcggaagctc 126  Q
    |||||||||| |||||||||||||||||||| ||||||||  | |||||||||||||||||| ||||  |||||||||||| | ||||||||||||||||    
T  39870 tatccgatgtgggacatataactcacacttgaacacaaca--attccccctcaagtgtgagttcatcaattcatcatgctcacccctcaagcggaagctc 39773  T
Q  127 ttt 129  Q
    |||    
T  39772 ttt 39770  T

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Target: scaffold0504 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 10215 - 10279
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    ||||||||||| |||||  |||||||||||||  |||||||||||||||||||  ||||||||||    
T  10215 aggtgttcaacttttaccattttatccgatgtgagacatataactcacacttgtgcacaacaaca 10279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 47414 - 47350
Alignment:
Q  6 aggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaaca 70  Q
    |||||||||| ||||||| ||||||| |||||  ||||| ||| ||||||||||||||| |||||    
T  47414 aggtgttcaaactttactattttatcggatgtgagacatttaattcacacttgcacacatcaaca 47350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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