View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0509_low_9 (Length: 230)

Name: NF0509_low_9
Description: NF0509
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0509_low_9
NF0509_low_9
[»] chr7 (14 HSPs)
chr7 (1-163)||(9544110-9544272)
chr7 (1-163)||(16141054-16141216)
chr7 (1-163)||(46498423-46498585)
chr7 (1-163)||(5390041-5390203)
chr7 (1-163)||(26304865-26305027)
chr7 (1-163)||(26361791-26361953)
chr7 (1-163)||(8502358-8502520)
chr7 (1-163)||(44898608-44898770)
chr7 (1-163)||(6535793-6535955)
chr7 (1-163)||(32099689-32099851)
chr7 (1-161)||(42596698-42596858)
chr7 (1-133)||(13284299-13284432)
chr7 (1-63)||(7582484-7582546)
chr7 (1-71)||(15175385-15175455)
[»] chr6 (7 HSPs)
chr6 (1-163)||(18161374-18161536)
chr6 (1-163)||(16899255-16899417)
chr6 (1-163)||(31358870-31359032)
chr6 (1-163)||(29541756-29541918)
chr6 (4-161)||(18704916-18705073)
chr6 (4-161)||(18710851-18711008)
chr6 (1-161)||(34766667-34766827)
[»] chr5 (13 HSPs)
chr5 (1-163)||(18362586-18362748)
chr5 (1-163)||(26201195-26201357)
chr5 (1-163)||(27413457-27413619)
chr5 (1-163)||(33940629-33940791)
chr5 (1-161)||(20949166-20949326)
chr5 (1-161)||(23375767-23375927)
chr5 (1-63)||(5601587-5601649)
chr5 (1-71)||(24413671-24413741)
chr5 (1-71)||(30453466-30453536)
chr5 (1-71)||(30458544-30458614)
chr5 (88-161)||(19781874-19781947)
chr5 (1-70)||(24289953-24290022)
chr5 (1-70)||(24299460-24299529)
[»] chr3 (9 HSPs)
chr3 (1-163)||(8974155-8974317)
chr3 (1-163)||(9538444-9538606)
chr3 (1-163)||(6423616-6423778)
chr3 (2-163)||(12387297-12387458)
chr3 (1-63)||(48979681-48979743)
chr3 (1-71)||(28366941-28367011)
chr3 (12-71)||(28374773-28374832)
chr3 (12-71)||(28382595-28382654)
chr3 (1-63)||(4384459-4384521)
[»] chr1 (3 HSPs)
chr1 (1-163)||(16156192-16156354)
chr1 (1-161)||(1988059-1988219)
chr1 (1-46)||(22959754-22959799)
[»] chr8 (8 HSPs)
chr8 (1-163)||(21211840-21212002)
chr8 (1-164)||(14892622-14892785)
chr8 (4-90)||(22832121-22832207)
chr8 (1-70)||(12916389-12916458)
chr8 (1-70)||(18233760-18233829)
chr8 (1-70)||(18243211-18243280)
chr8 (1-70)||(25036218-25036287)
chr8 (1-70)||(25050255-25050324)
[»] chr4 (8 HSPs)
chr4 (1-163)||(6693527-6693689)
chr4 (1-162)||(16254548-16254709)
chr4 (1-161)||(17150684-17150844)
chr4 (4-161)||(7845331-7845488)
chr4 (1-161)||(520783-520943)
chr4 (1-71)||(54698641-54698711)
chr4 (1-71)||(26813333-26813403)
chr4 (126-161)||(13791747-13791782)
[»] chr2 (6 HSPs)
chr2 (1-163)||(18652527-18652689)
chr2 (4-163)||(9512637-9512796)
chr2 (1-156)||(45015669-45015824)
chr2 (1-161)||(27168856-27169016)
chr2 (1-161)||(22903455-22903610)
chr2 (1-63)||(1791963-1792025)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-163)||(53400-53562)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-163)||(148017-148179)
[»] scaffold0141 (1 HSPs)
scaffold0141 (5-163)||(20084-20242)
[»] scaffold0313 (2 HSPs)
scaffold0313 (1-161)||(7080-7240)
scaffold0313 (1-161)||(10862-11022)
[»] scaffold0254 (1 HSPs)
scaffold0254 (1-161)||(6438-6598)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-161)||(16538-16698)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-71)||(103155-103225)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-46)||(189396-189441)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-70)||(257899-257968)


Alignment Details
Target: chr7 (Bit Score: 151; Significance: 5e-80; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 9544110 - 9544272
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  9544110 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 9544209  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9544210 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 9544272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 16141054 - 16141216
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  16141054 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 16141153  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16141154 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 16141216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 46498585 - 46498423
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  46498585 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 46498486  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46498485 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 46498423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 5390041 - 5390203
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  5390041 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 5390140  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5390141 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatttgtgatga 5390203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 26305027 - 26304865
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  26305027 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 26304928  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26304927 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatttgtgatga 26304865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26361791 - 26361953
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  26361791 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 26361890  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26361891 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatttgtgatga 26361953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 8502520 - 8502358
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  8502520 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 8502421  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  8502420 atgcactttttgctttgacagctccttctttgtttgttggaacaaagtctccatttgtgatga 8502358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 44898770 - 44898608
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  44898770 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 44898671  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  44898670 atgcactttttgctttgacagctccttctttgtttgttggaacaaagtctccatttgtgatga 44898608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 6535955 - 6535793
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| | |||    
T  6535955 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgctgacc 6535856  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  6535855 atgcactttttgctttgacagctccttctttgtttgttggaacaaagtctccatttgtgatga 6535793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 32099851 - 32099689
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||| |||    
T  32099851 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttaataatacctgagctttttcatctgttgacc 32099752  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  32099751 atgcactttttgctttgacagctccttctttggttgttggaacaaaatctccatttgtgatga 32099689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 42596858 - 42596698
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| |||||||||||||||||| |||    
T  42596858 cattcatcacctctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttaacaatacctgagctttttcatctgttgacc 42596759  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| ||| ||||||  | ||||| ||||||  |||||||||||||||||||||||||    
T  42596758 atgcactcttttctttgatggttccttttttggtctttggaacaaagtctccatctgtgat 42596698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 13284299 - 13284432
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcac- 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||  |||||||||| ||||||||||||| ||     
T  13284299 cattcatcaactctttcactttcttccatggttagtgcacataatagaaagagtctagctttagaatttaacaatacttgagatttttcatctgttgaca 13284398  T
Q  100 catgcactttttgctttgacagctccttctttgg 133  Q
    |||||||| ||| ||||||  | |||||||||||    
T  13284399 catgcactcttttctttgatggttccttctttgg 13284432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7582546 - 7582484
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagcttta 63  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||    
T  7582546 cattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtcgagcttta 7582484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15175455 - 15175385
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttag 71  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| ||||||| |||||||    
T  15175455 cattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaaaagtcaagctttagagtttag 15175385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 5e-80; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 18161536 - 18161374
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  18161536 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 18161437  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18161436 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 18161374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16899417 - 16899255
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  16899417 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 16899318  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16899317 atgcactttttgctttgacagctccttctttggttgttggaacatagtctccatctgtgatga 16899255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 31359032 - 31358870
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  31359032 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 31358933  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  31358932 atgcactttttgctttgacagctccttctttggttgttggaacaaagtcttcatttgtgatga 31358870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 29541918 - 29541756
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| ||||| |||||||||||| |||    
T  29541918 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttaacaatacctgagccttttcatctgttgacc 29541819  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29541818 atgcactcttttctttgacagctccttctttggttgttggaacaaagtctccatctatgatga 29541756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 18704916 - 18705073
Alignment:
Q  4 tcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcaccatg 103  Q
    |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  18704916 tcatcaactcttgcactttcttccatggtcagtgcacatgataaaaagagtctagctttagagtttagtaatacatgagctttttcatctgttgaccatg 18705015  T
Q  104 cactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    |||| ||| | || |||||||||| ||||||||||| |||||||||||||||||||||    
T  18705016 cactcttttcctttacagctccttatttggttgttgcaacaaagtctccatctgtgat 18705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 18710851 - 18711008
Alignment:
Q  4 tcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcaccatg 103  Q
    |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  18710851 tcatcaactcttgcactttcttccatggtcagtgcacatgataaaaagagtctagctttagagtttagtaatacatgagctttttcatctgttgaccatg 18710950  T
Q  104 cactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    |||| ||| | || |||||||||| ||||||||||| |||||||||||||||||||||    
T  18710951 cactcttttcctttacagctccttatttggttgttgcaacaaagtctccatctgtgat 18711008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 34766827 - 34766667
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||| |||    
T  34766827 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgacc 34766728  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| ||  ||||||     ||||||||||||  ||||||||||||||||||||||||    
T  34766727 atgcactcttaactttgatgatcccttctttggttagtggaacaaagtctccatctgtgat 34766667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 18362748 - 18362586
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  18362748 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 18362649  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18362648 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 18362586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26201195 - 26201357
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  26201195 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 26201294  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26201295 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatttgtgatga 26201357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 27413619 - 27413457
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||||||||| |||    
T  27413619 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttaaaatttagtaatacctgacctttttcatctgttgacc 27413520  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27413519 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 27413457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33940791 - 33940629
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  33940791 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 33940692  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  33940691 atgcactttttgctttgacagctccttctttgtttgttggaacaaagtctccatttgtgatga 33940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 20949326 - 20949166
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||| |||    
T  20949326 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgacc 20949227  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| ||  ||||||     ||||||||||||  ||||||||||||||||||||||||    
T  20949226 atgcactcttaactttgatgatcccttctttggttagtggaacaaagtctccatctgtgat 20949166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 23375767 - 23375927
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| ||||||  ||||| |||||||| |||||| || |||    
T  23375767 catttatcaactctttcattttcttccatggttagtgcacatgataaaaagagtctaggtttagagtttaacaatacatgagctttgtcatctattgacc 23375866  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| |||  |||||  | ||||||||| ||  |||||||||||||||||| ||||||    
T  23375867 atgcactcttttgtttgatggttccttctttagtctttggaacaaagtctccatttgtgat 23375927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5601649 - 5601587
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagcttta 63  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  5601649 cattcatcaactctttcactttcttccatgcttagtgcacatgatagaaagagtcgagcttta 5601587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24413741 - 24413671
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttag 71  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| |||||||    
T  24413741 cattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtcgagctttagagtttag 24413671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30453466 - 30453536
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttag 71  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| |||||||    
T  30453466 cattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtcgagctttagagtttag 30453536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30458544 - 30458614
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttag 71  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| |||||||    
T  30458544 cattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtcgagctttagagtttag 30458614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 19781947 - 19781874
Alignment:
Q  88 tcatctgttcaccatgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||||  |||||||||| ||| | || ||| ||||||||||||||||||||||||||||||||||||||||    
T  19781947 tcatctgtggaccatgcactattttcctttacaactccttctttggttgttggaacaaagtctccatctgtgat 19781874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24289953 - 24290022
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagttta 70  Q
    ||||||| || |||||||||||||||||||||||||| ||||  || |||||||  ||||||| ||||||    
T  24289953 cattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagttgagctttagagttta 24290022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24299460 - 24299529
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagttta 70  Q
    ||||||| || |||||||||||||||||||||||||| ||||  || |||||||  ||||||| ||||||    
T  24299460 cattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagttgagctttagagttta 24299529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 5e-80; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 8974317 - 8974155
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  8974317 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 8974218  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8974217 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 8974155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 9538606 - 9538444
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  9538606 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 9538507  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9538506 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatttgtgatga 9538444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 6423778 - 6423616
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  6423778 cattcatcaactctttcactttcttccatggttagtgcacacgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 6423679  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6423678 atgcattttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 6423616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 12387458 - 12387297
Alignment:
Q  2 attcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacca 101  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| ||||    
T  12387458 attcataaactctttcagtttcttccatggttagtgcacatgatagaaagagtctagctttagagtttattaatacttgagctttttcatttgttgacca 12387359  T
Q  102 tgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  12387358 tgcacttttttctttgacagttccttctttggtttttggaacaaagtctccatctgtgatga 12387297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 48979743 - 48979681
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagcttta 63  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  48979743 cattcatcaactctttcactttcttccatgcttagtgcacatgatagaaagagtcgagcttta 48979681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28366941 - 28367011
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttag 71  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||  |||||||    
T  28366941 cattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtcgagctttggagtttag 28367011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 28374773 - 28374832
Alignment:
Q  12 tctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttag 71  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||||||  |||||||    
T  28374773 tctttcactttcttccatgcttagtgcgcatgatagaaagagtcgagctttggagtttag 28374832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 28382595 - 28382654
Alignment:
Q  12 tctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttag 71  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||||||  |||||||    
T  28382595 tctttcactttcttccatgcttagtgcgcatgatagaaagagtcgagctttggagtttag 28382654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4384459 - 4384521
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagcttta 63  Q
    |||||||||||||||||||||||||||||| ||| |   ||||||||| ||| || |||||||    
T  4384459 cattcatcaactctttcactttcttccatgcttaatctgcatgatagatagactcgagcttta 4384521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 16156354 - 16156192
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  16156354 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 16156255  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16156254 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 16156192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 1988059 - 1988219
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||| |||    
T  1988059 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgacc 1988158  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| ||  ||||||    |||||||||||||  ||||||||||||||||||||||||    
T  1988159 atgcactcttaactttgatgattccttctttggttaatggaacaaagtctccatctgtgat 1988219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22959799 - 22959754
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgata 46  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||||    
T  22959799 cattcatcaaccctttcactttcttccaaggttaatgcacatgata 22959754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 3e-75; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 21211840 - 21212002
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  21211840 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 21211939  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  21211940 atgcactttttgctttgacagctccttctttgtttgttggaacaaagtctccatttgtgatga 21212002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14892622 - 14892785
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  ||||| |||||||||||||||||| |||    
T  14892622 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagaatttaacaatacctgagctttttcatctgttgacc 14892721  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatgat 164  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14892722 atgcacttttttctttgacagctccttctttggttgttggaacaaagtctccatatgtgatgat 14892785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 22832207 - 22832121
Alignment:
Q  4 tcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttca 90  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  22832207 tcatcaactctttcactttctttcatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttca 22832121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12916458 - 12916389
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagttta 70  Q
    ||||||| || |||||||||||||||||||||||||| ||||  || |||||||  ||||||| ||||||    
T  12916458 cattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagttgagctttagagttta 12916389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18233829 - 18233760
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagttta 70  Q
    ||||||| || |||||||||||||||||||||||||| ||||  || |||||||  ||||||| ||||||    
T  18233829 cattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagttgagctttagagttta 18233760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18243280 - 18243211
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagttta 70  Q
    ||||||| || |||||||||||||||||||||||||| ||||  || |||||||  ||||||| ||||||    
T  18243280 cattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagttgagctttagagttta 18243211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25036218 - 25036287
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagttta 70  Q
    ||||||| || |||||||||||||||||||||||||| ||||  || |||||||  ||||||| ||||||    
T  25036218 cattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagttgagctttagagttta 25036287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25050255 - 25050324
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagttta 70  Q
    ||||||| || |||||||||||||||||||||||||| ||||  || |||||||  ||||||| ||||||    
T  25050255 cattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagttgagctttagagttta 25050324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 6693689 - 6693527
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  6693689 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 6693590  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  6693589 atgcactttttgctttgacagctccttctttgtttgttggaacaaagtctccatttgtgatga 6693527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 16254709 - 16254548
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||| |||    
T  16254709 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttaacaatacttgagctttttcatctgttgacc 16254610  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatg 162  Q
    ||| ||| ||| || ||||| |||||||||||||||||||||||||||||||||||||||||    
T  16254609 atgtactcttttctgtgacaactccttctttggttgttggaacaaagtctccatctgtgatg 16254548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 17150844 - 17150684
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||| ||||| |||||||||||| |||    
T  17150844 cattcatcaactctttcactttcttccatggttagtgcaaatgatagaaagagtctagctttaaagtttaacaatacctgagcattttcatctgttgacc 17150745  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| ||| ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  17150744 atgcactcttttctttgacagttccttcgttggttgttggaacaaagtctccatctgtgat 17150684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 7845331 - 7845488
Alignment:
Q  4 tcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcaccatg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||| |||||||||||| ||||||    
T  7845331 tcatcaactctttcactttcttccatggttagtgcacatgatagaaaaagtctagctttagagtttagtaatacatgagccttttcatctgttgaccatg 7845430  T
Q  104 cactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    |  | ||| | || | ||||||||||||| ||||||||||||||||||||||||||||    
T  7845431 ccttcttttcctttatagctccttctttgtttgttggaacaaagtctccatctgtgat 7845488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 520783 - 520943
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||| |||    
T  520783 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgacc 520882  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| ||  ||||||     ||||||||||||  ||||||||||||||||||||||||    
T  520883 atgcactcttaactttgatgatcccttctttggttagtggaacaaagtctccatctgtgat 520943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 54698641 - 54698711
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttag 71  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| |||||||    
T  54698641 cattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtcgagctttagagtttag 54698711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26813403 - 26813333
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttag 71  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||  |||||||    
T  26813403 cattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtcgagctttggagtttag 26813333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 13791747 - 13791782
Alignment:
Q  126 ttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||||||||||||||||||||||||||| ||||    
T  13791747 ttctttggttgttggaacaaagtctccatctttgat 13791782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 3e-75; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 18652689 - 18652527
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  18652689 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgacc 18652590  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  18652589 atgcactttttgctttgacagctccttctttgtttgttggaacaaagtctccatttgtgatga 18652527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 9512637 - 9512796
Alignment:
Q  4 tcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcaccatg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  9512637 tcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagtaatacctgagctttttcatctgttgaccatg 9512736  T
Q  104 cactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  9512737 cactttttgctttgacagctccttctttgtttgttggaacaaagtctccatttgtgatga 9512796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 45015824 - 45015669
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| ||||||||| |||||||||||||||||| |||    
T  45015824 cattcatcaactctttcactttcttccatggttagtgcacatgataaaaagactctagctttagagtatagtaatacctgagctttttcatctgttgacc 45015725  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatct 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  45015724 atgcactttttgctttgacagctccttctttggttgttggaacaaaatcttcatct 45015669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 27168856 - 27169016
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||| |||    
T  27168856 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgacc 27168955  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| ||  ||||||     ||||||||||||  ||||||||||||||||||||||||    
T  27168956 atgcactcttaactttgatgatcccttctttggttagtggaacaaagtctccatctgtgat 27169016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 22903610 - 22903455
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| |||| ||||||||||||| |||    
T  22903610 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttaacaatacctgagttttttcatctgttgacc 22903511  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| ||| ||||||  | |||||||||     ||||||||||||||| |||||||||    
T  22903510 atgcactcttttctttgatggttccttcttt-----ttggaacaaagtctctatctgtgat 22903455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1792025 - 1791963
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagcttta 63  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  1792025 cattcatcaactctttcactttcttccatgcttagtgcacatgatagaaagagtcgagcttta 1791963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 53400 - 53562
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||  ||||| ||||||||||||||| || |||    
T  53400 cattcatcaactctttcactttcttccatggttaatgcacatgatagaaagagtctagctttagaatttaacaatacctgagctttttcatctattgacc 53499  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53500 atgcactcttttctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 53562  T

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Target: scaffold0014 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 148179 - 148017
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||| |||| |||    
T  148179 cattcatcaactctttcactttcttccatggtaagtgcacatgatagaaagagtctagcttaagagtttagtaatacctgagctttttcatttgttgacc 148080  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    ||||||| ||| | || ||||||||||||||||||||||||||||||||||||||||||||||    
T  148079 atgcactcttttcctttacagctccttctttggttgttggaacaaagtctccatctgtgatga 148017  T

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Target: scaffold0141 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 20242 - 20084
Alignment:
Q  5 catcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcaccatgc 104  Q
    ||||||||||||||||||||||| | || |||||||||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||| |||||||    
T  20242 catcaactctttcactttcttccctagtcagtgcacatgatagaaagagtctagctttggagtttagtaatacctgagatttttcatctgttgaccatgc 20143  T
Q  105 actttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgatga 163  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20142 acttttttcttttacagctccttctttggttgttggaacaaagtctccatctgtgatga 20084  T

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Target: scaffold0313 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 7240 - 7080
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||| |||    
T  7240 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgacc 7141  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| ||  ||||||     ||||||||||||  ||||||||||||||||||||||||    
T  7140 atgcactcttaactttgatgatcccttctttggttagtggaacaaagtctccatctgtgat 7080  T

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Target: scaffold0313; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 11022 - 10862
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||| |||    
T  11022 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgacc 10923  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| ||  ||||||     ||||||||||||  ||||||||||||||||||||||||    
T  10922 atgcactcttaactttgatgatcccttctttggttagtggaacaaagtctccatctgtgat 10862  T

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Target: scaffold0254 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 6438 - 6598
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||||||||| |||    
T  6438 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttagagtttagcaatacctgagccttttcatctgttgacc 6537  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| ||  ||||||     ||||||||||||  ||||||||||||||||||||||||    
T  6538 atgcactcttaactttgatgatcccttctttggttagtggaacaaagtctccatctgtgat 6598  T

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Target: scaffold0016 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 16698 - 16538
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttagtaatacttgagctttttcatctgttcacc 100  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| ||||||  ||||| |||||||| |||||| || |||    
T  16698 catttatcaactctttcattttcttccatggttagtgcacatgataaaaagagtctaggtttagagtttaacaatacatgagctttgtcatctattgacc 16599  T
Q  101 atgcactttttgctttgacagctccttctttggttgttggaacaaagtctccatctgtgat 161  Q
    ||||||| |||  |||||  | ||||||||| ||  |||||||||||||||||| ||||||    
T  16598 atgcactcttttgtttgatggttccttctttagtctttggaacaaagtctccatttgtgat 16538  T

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Target: scaffold0028 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 103155 - 103225
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagtttag 71  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| |||||||    
T  103155 cattcatcaactctttcactttcttccatgcttagtgcgcatgatagaaagagtcgagctttagagtttag 103225  T

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Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 189396 - 189441
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgata 46  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||    
T  189396 cattcatcaaccctttcaatttcttccaaggttagtgcacatgata 189441  T

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Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 257968 - 257899
Alignment:
Q  1 cattcatcaactctttcactttcttccatggttagtgcacatgatagaaagagtctagctttatagttta 70  Q
    ||||||| || |||||||||||||||||||||||||| ||||  || |||||||  ||||||| ||||||    
T  257968 cattcataaattctttcactttcttccatggttagtgaacattgtaaaaagagttgagctttagagttta 257899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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