View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0518_low_12 (Length: 250)
Name: NF0518_low_12
Description: NF0518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0518_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 9 - 237
Target Start/End: Complemental strand, 36606023 - 36605795
Alignment:
| Q |
9 |
taataggcctcataaagttagccagccaaagcttatgtacatctcaactggtgatgacaagttcatggtgagggaaagagtgtcctcagtggctgaaatt |
108 |
Q |
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| T |
36606023 |
taataggcctcataaagttagccagccaaagcttatgtacatctcaactggtgatgacaagttcatggtgagggaaagagtgtcctcagtggctgaaatt |
36605924 |
T |
|
| Q |
109 |
gcacctctgaatatatctactaaaatttcaagccagaaagttttagaagaagagaagggaatggttttacagaatctagcaacagaaaggcctgcttctg |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36605923 |
gcacctctgaatatatctactaaaatttcaagccagaaagttttagaagaagagaagggaatggttttacagaatctagcaacagaaaggcctgcttctg |
36605824 |
T |
|
| Q |
209 |
gccatcttcccccagcttttgatgatgtc |
237 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
36605823 |
gccatcttcccccagcttttgatgatgtc |
36605795 |
T |
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