View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0519_high_6 (Length: 404)
Name: NF0519_high_6
Description: NF0519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0519_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 30 - 398
Target Start/End: Original strand, 35220801 - 35221174
Alignment:
| Q |
30 |
acttcctctatttttgggggttatgattgaaaatgactagctaaatattgatgtattcactgtactgtgccatttgcagaaggcacattcaggttcacta |
129 |
Q |
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| T |
35220801 |
acttcctctatttttgggggttatgattgaaaatgactagctaaatattgatgtattcactgtactgtgccatttgcagaaggcacattcaggttcacta |
35220900 |
T |
|
| Q |
130 |
atattttgtaatgt-----tatgaaaagttatgatgcatgttatttattctaaatccgaagggaagattccaattgtttgttgcaacttgcatttcatac |
224 |
Q |
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| T |
35220901 |
atattttgtaatgttatgttatgaaaagttatgatgcatgttatttattctaaatccgaagggaagattccaattgtttgttgcaacttgcatttcatac |
35221000 |
T |
|
| Q |
225 |
atatgcttaatgatcctatatttccctctcaagttgccacgtactgttcatttccataactatctctcaacttgcagggtggggttttgatgatcatttc |
324 |
Q |
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| T |
35221001 |
atatgcttaatgatcctatatttccctctcaagttgccacgtactgttcatctccataactatctctcaacttgcagggtggggttttgatgatcatttt |
35221100 |
T |
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| Q |
325 |
tgtataggtttatatgtttgtgtctttatcactcaacttgctaccttaggtcacctaatttgatttcatctcac |
398 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
35221101 |
tgtattggtttatatgtttgtgtctttatcactcaacttgctaccttaggtcacctaatttgatttcatttcac |
35221174 |
T |
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