View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0520_high_10 (Length: 362)
Name: NF0520_high_10
Description: NF0520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0520_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 43453651 - 43453921
Alignment:
| Q |
1 |
agtaaactgccttatactatcaacaaactatactcaatcatatgtgtgaatttaaaagtagtcattcataaaatgcgggttagtgactttagtagtagtt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
43453651 |
agtaaactgccttatactatcaacaaactatactcaatcatatgtgtgaatttaaaagtagtcattcataaaatgtgggttagtgactttagtagtagtt |
43453750 |
T |
|
| Q |
101 |
atacttaaaagttggattaacccttaaataaacggctcgtaaaaggaagactacacctgcttataaacatattttatgccttatctcattcaatgttgga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43453751 |
atacttaaaagttggattaacccttaaataaacggctcgtaaaaggaagactacacctgcttataaacatattttatgccttatctcattcaatgttgga |
43453850 |
T |
|
| Q |
201 |
ctcttaacacctttgggattagaaatttggagcatgacccaagtgccccaaaagcaatgacttgatgatgt |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43453851 |
ctcttaacacctttgggattagaaatttggagcatgacccaagtgccccaaaagcaatgacttgatgatgt |
43453921 |
T |
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