View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0520_low_13 (Length: 315)
Name: NF0520_low_13
Description: NF0520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0520_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 5414742 - 5414524
Alignment:
| Q |
1 |
attgttgtaggtatggtaaagtgttcaagtcacacatatttggaagccctaccattgtttcaacagatgcagatgtgaataagtttatactacaaagtga |
100 |
Q |
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| T |
5414742 |
attgttgcaggtatggtaaagtgttcaagtcacacatatttggaagccctaccattgtttcaacagatgcagatgtgaataagtttatactacaaagtga |
5414643 |
T |
|
| Q |
101 |
tgcaaaggtttttgttccttcttatcccaagtcattgatgcagttaatgggagagtcttctattttgctcatcaatggaaccttgcaaaggagaatacat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5414642 |
tgcaaaggtttttgttccttcttatcccaagtcattgatgcagttaatgggagagtcttctattttgctcatcaatggaaccttgcaaaggagaatacat |
5414543 |
T |
|
| Q |
201 |
ggacttattggtgctttct |
219 |
Q |
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||||||||||||||||||| |
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| T |
5414542 |
ggacttattggtgctttct |
5414524 |
T |
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