View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0526_high_54 (Length: 252)
Name: NF0526_high_54
Description: NF0526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0526_high_54 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 48015845 - 48016073
Alignment:
| Q |
1 |
cacattaaagaaattgtaagcagtaaatgttgaatgaaattacttggagtttaggactacaaatcctacaaggccagccgcctcgcgaagtgccggtctc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
48015845 |
cacattaaagaaattgtaagcagtaaatgttgaatgaaattacttggagtttaggactacaaatcctacaaggccagccgcctcgcgaagtgccagtctc |
48015944 |
T |
|
| Q |
101 |
catgcttgctcaaaatactgacgaagctgcaatttgtagttcttattctctaaacacaacttacgttccctctttgaaatcttcgtcaaaagattttgaa |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
48015945 |
catgcttgctcaaaatactgacgaagctgcaatttgtagttcttattctctaaacgcaacttatgttccctctttgaaatcttcgtcaaaagattttgaa |
48016044 |
T |
|
| Q |
201 |
atgctattccgaactcaccaatttgatga |
229 |
Q |
| |
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||||||||||||||||||||||||||||| |
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|
| T |
48016045 |
atgctattccgaactcaccaatttgatga |
48016073 |
T |
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