View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0526_low_36 (Length: 385)

Name: NF0526_low_36
Description: NF0526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0526_low_36
NF0526_low_36
[»] chr3 (45 HSPs)
chr3 (1-157)||(33362240-33362396)
chr3 (252-347)||(33214441-33214536)
chr3 (249-347)||(27073079-27073177)
chr3 (254-347)||(36274120-36274212)
chr3 (254-346)||(36635410-36635502)
chr3 (248-345)||(19580483-19580580)
chr3 (253-331)||(33214626-33214704)
chr3 (256-331)||(10598810-10598885)
chr3 (191-253)||(33362144-33362206)
chr3 (253-331)||(36274312-36274390)
chr3 (254-331)||(33219072-33219149)
chr3 (252-315)||(27072911-27072974)
chr3 (254-316)||(10599000-10599062)
chr3 (254-345)||(11651000-11651091)
chr3 (257-322)||(36635241-36635305)
chr3 (1-63)||(41359804-41359868)
chr3 (1-63)||(47964557-47964621)
chr3 (1-70)||(22304624-22304693)
chr3 (1-70)||(32589758-32589827)
chr3 (1-92)||(37990655-37990742)
chr3 (1-70)||(12114596-12114665)
chr3 (1-62)||(21832385-21832446)
chr3 (1-70)||(22303989-22304058)
chr3 (1-70)||(35946577-35946646)
chr3 (1-70)||(43346825-43346894)
chr3 (1-70)||(54018232-54018301)
chr3 (4-48)||(22303715-22303759)
chr3 (1-69)||(29644937-29645005)
chr3 (1-48)||(1634370-1634417)
chr3 (1-92)||(15772909-15772996)
chr3 (1-64)||(33803290-33803355)
chr3 (1-63)||(8327959-8328023)
chr3 (1-70)||(32462934-32463003)
chr3 (1-70)||(42342124-42342193)
chr3 (1-70)||(54017850-54017919)
chr3 (1-92)||(15773247-15773336)
chr3 (1-69)||(29644616-29644684)
chr3 (1-69)||(37991012-37991080)
chr3 (1-62)||(42342428-42342491)
chr3 (1-62)||(52634731-52634793)
chr3 (7-48)||(39389131-39389172)
chr3 (1-70)||(39934989-39935058)
chr3 (1-63)||(45395692-45395756)
chr3 (1-62)||(25739465-25739528)
chr3 (1-62)||(32462598-32462661)
[»] chr6 (35 HSPs)
chr6 (255-347)||(33022339-33022431)
chr6 (254-346)||(21389021-21389113)
chr6 (252-331)||(33022162-33022241)
chr6 (255-346)||(7789842-7789933)
chr6 (257-323)||(21389217-21389282)
chr6 (265-336)||(7789678-7789748)
chr6 (255-344)||(28472535-28472624)
chr6 (1-70)||(29518558-29518627)
chr6 (1-70)||(29518975-29519044)
chr6 (1-70)||(32741234-32741303)
chr6 (1-62)||(16454962-16455025)
chr6 (1-70)||(2377809-2377878)
chr6 (1-70)||(3409314-3409383)
chr6 (1-70)||(3415513-3415582)
chr6 (1-63)||(10074030-10074094)
chr6 (1-70)||(16107733-16107802)
chr6 (1-62)||(1127415-1127478)
chr6 (255-344)||(29859723-29859813)
chr6 (1-70)||(2378181-2378250)
chr6 (1-70)||(2578477-2578546)
chr6 (1-70)||(3058281-3058350)
chr6 (1-63)||(10074402-10074466)
chr6 (1-62)||(16454630-16454693)
chr6 (1-48)||(32460636-32460683)
chr6 (1-48)||(35210259-35210306)
chr6 (1-70)||(2843609-2843679)
chr6 (1-70)||(2579906-2579975)
chr6 (1-70)||(3409715-3409784)
chr6 (1-70)||(593741-593812)
chr6 (1-92)||(2579508-2579595)
chr6 (11-63)||(12071730-12071784)
chr6 (1-70)||(1846803-1846872)
chr6 (1-70)||(2578869-2578938)
chr6 (1-70)||(26544104-26544173)
chr6 (1-37)||(16108118-16108154)
[»] chr5 (58 HSPs)
chr5 (251-347)||(8323879-8323975)
chr5 (253-347)||(26534669-26534763)
chr5 (254-371)||(791592-791709)
chr5 (254-347)||(130419-130512)
chr5 (254-346)||(33377820-33377912)
chr5 (257-347)||(42630878-42630968)
chr5 (253-346)||(5146675-5146768)
chr5 (254-331)||(26534506-26534583)
chr5 (253-345)||(8489122-8489214)
chr5 (254-346)||(13823320-13823412)
chr5 (254-345)||(6518203-6518294)
chr5 (254-345)||(19898927-19899018)
chr5 (253-331)||(130253-130331)
chr5 (254-331)||(8323707-8323784)
chr5 (254-346)||(228717-228809)
chr5 (257-345)||(35454623-35454710)
chr5 (254-331)||(42630711-42630788)
chr5 (254-345)||(40881792-40881881)
chr5 (253-322)||(14069860-14069928)
chr5 (254-323)||(14388515-14388583)
chr5 (254-323)||(35454451-35454519)
chr5 (257-323)||(19897228-19897293)
chr5 (271-345)||(40881992-40882066)
chr5 (254-311)||(791810-791867)
chr5 (254-322)||(5146504-5146571)
chr5 (1-70)||(13415794-13415863)
chr5 (253-338)||(13823149-13823233)
chr5 (253-317)||(6518404-6518467)
chr5 (1-67)||(25327990-25328056)
chr5 (1-63)||(1028556-1028620)
chr5 (1-70)||(18603154-18603223)
chr5 (1-63)||(26074667-26074731)
chr5 (269-342)||(27319643-27319716)
chr5 (1-70)||(40296349-40296418)
chr5 (1-48)||(32487448-32487495)
chr5 (1-48)||(41170689-41170736)
chr5 (1-62)||(26074821-26074885)
chr5 (1-47)||(26075219-26075265)
chr5 (1-70)||(6500505-6500574)
chr5 (1-66)||(9498692-9498757)
chr5 (1-70)||(11417011-11417080)
chr5 (1-70)||(27502070-27502139)
chr5 (1-70)||(34753059-34753128)
chr5 (1-62)||(15370457-15370520)
chr5 (257-315)||(228987-229044)
chr5 (1-43)||(3295405-3295447)
chr5 (1-70)||(15370154-15370223)
chr5 (1-70)||(41632837-41632906)
chr5 (1-62)||(3295055-3295118)
chr5 (6-63)||(26074185-26074244)
chr5 (1-66)||(36568603-36568670)
chr5 (9-48)||(36521952-36521991)
chr5 (1-63)||(624251-624315)
chr5 (3-48)||(2411064-2411109)
chr5 (1-70)||(36492251-36492320)
chr5 (1-63)||(36522276-36522340)
chr5 (1-69)||(29549290-29549358)
chr5 (4-48)||(42405652-42405696)
[»] chr4 (53 HSPs)
chr4 (254-347)||(40534134-40534227)
chr4 (254-347)||(3102711-3102804)
chr4 (249-345)||(18936850-18936946)
chr4 (244-331)||(3102530-3102617)
chr4 (250-331)||(13690211-13690292)
chr4 (253-345)||(37177799-37177891)
chr4 (253-331)||(40533962-40534040)
chr4 (254-331)||(9231580-9231657)
chr4 (250-323)||(11147010-11147083)
chr4 (273-347)||(9231751-9231825)
chr4 (253-339)||(18381488-18381574)
chr4 (253-320)||(5121005-5121072)
chr4 (253-334)||(18936675-18936755)
chr4 (1-70)||(50630787-50630856)
chr4 (1-70)||(31691207-31691278)
chr4 (1-63)||(22027998-22028062)
chr4 (1-70)||(25483391-25483460)
chr4 (1-70)||(36629292-36629361)
chr4 (1-70)||(41370412-41370481)
chr4 (1-62)||(4955355-4955418)
chr4 (1-48)||(3271842-3271889)
chr4 (1-48)||(18879861-18879908)
chr4 (3-63)||(54936253-54936315)
chr4 (1-70)||(1731679-1731748)
chr4 (1-70)||(3340862-3340931)
chr4 (1-63)||(22183301-22183365)
chr4 (1-70)||(39404453-39404522)
chr4 (1-70)||(44620715-44620783)
chr4 (1-70)||(54108968-54109036)
chr4 (1-70)||(55933156-55933225)
chr4 (4-48)||(49302964-49303008)
chr4 (1-69)||(54017628-54017696)
chr4 (1-48)||(49880215-49880262)
chr4 (1-70)||(18932781-18932850)
chr4 (1-70)||(45496860-45496929)
chr4 (1-62)||(43174562-43174625)
chr4 (1-65)||(52884942-52885009)
chr4 (1-48)||(2741126-2741173)
chr4 (1-68)||(23817715-23817782)
chr4 (3-70)||(50002483-50002550)
chr4 (1-92)||(16889550-16889637)
chr4 (1-63)||(3244488-3244552)
chr4 (8-58)||(19504758-19504810)
chr4 (5-70)||(22028401-22028466)
chr4 (1-63)||(28034284-28034348)
chr4 (1-70)||(39792892-39792961)
chr4 (1-70)||(50459776-50459845)
chr4 (1-45)||(2891879-2891923)
chr4 (1-62)||(6975494-6975557)
chr4 (1-62)||(34646687-34646750)
chr4 (1-45)||(36572074-36572118)
chr4 (2-63)||(36608698-36608761)
chr4 (1-62)||(39404073-39404136)
[»] chr1 (57 HSPs)
chr1 (254-371)||(10227712-10227829)
chr1 (254-347)||(26552163-26552256)
chr1 (251-345)||(23346416-23346510)
chr1 (254-345)||(48871410-48871501)
chr1 (258-331)||(19059378-19059451)
chr1 (253-345)||(28217692-28217784)
chr1 (254-346)||(50892963-50893055)
chr1 (263-347)||(19059549-19059633)
chr1 (253-320)||(10227910-10227977)
chr1 (255-346)||(39669230-39669321)
chr1 (254-346)||(41833874-41833966)
chr1 (256-331)||(26551992-26552067)
chr1 (254-323)||(48752589-48752657)
chr1 (255-341)||(50904992-50905080)
chr1 (281-345)||(7062034-7062098)
chr1 (253-323)||(28217529-28217598)
chr1 (254-320)||(48871247-48871312)
chr1 (254-320)||(50893161-50893226)
chr1 (254-323)||(42180571-42180639)
chr1 (253-323)||(7062192-7062261)
chr1 (254-323)||(4156892-4156960)
chr1 (254-323)||(41834071-41834139)
chr1 (255-323)||(50905107-50905175)
chr1 (1-63)||(17294632-17294696)
chr1 (1-66)||(50052061-50052126)
chr1 (1-66)||(66123-66190)
chr1 (263-319)||(23346620-23346675)
chr1 (254-346)||(42180744-42180834)
chr1 (1-48)||(44290514-44290561)
chr1 (1-47)||(44290882-44290928)
chr1 (1-70)||(26661932-26662001)
chr1 (1-63)||(34364980-34365044)
chr1 (1-70)||(38804389-38804458)
chr1 (1-62)||(14318922-14318985)
chr1 (1-68)||(3550775-3550842)
chr1 (1-48)||(31767217-31767264)
chr1 (1-70)||(9955963-9956033)
chr1 (1-62)||(41142427-41142491)
chr1 (1-63)||(3875370-3875434)
chr1 (1-63)||(22077534-22077598)
chr1 (1-63)||(26661561-26661625)
chr1 (1-70)||(32594750-32594819)
chr1 (1-70)||(37556167-37556235)
chr1 (1-70)||(41157046-41157115)
chr1 (1-70)||(41157430-41157499)
chr1 (1-69)||(5320000-5320068)
chr1 (1-62)||(5528794-5528857)
chr1 (1-69)||(41759538-41759606)
chr1 (1-48)||(66528-66575)
chr1 (1-48)||(11977335-11977382)
chr1 (7-70)||(32168732-32168795)
chr1 (1-40)||(41184489-41184528)
chr1 (1-67)||(29798254-29798320)
chr1 (5-70)||(3537633-3537698)
chr1 (1-66)||(44043810-44043875)
chr1 (1-70)||(45839686-45839755)
chr1 (1-53)||(30630689-30630741)
[»] chr2 (56 HSPs)
chr2 (253-347)||(13280006-13280100)
chr2 (253-371)||(31860232-31860350)
chr2 (254-347)||(42028578-42028671)
chr2 (252-347)||(2059655-2059750)
chr2 (254-347)||(16115046-16115139)
chr2 (253-347)||(7317806-7317900)
chr2 (253-327)||(36059278-36059352)
chr2 (249-331)||(42028765-42028847)
chr2 (254-346)||(31470587-31470678)
chr2 (253-336)||(15332844-15332927)
chr2 (248-323)||(31860073-31860148)
chr2 (254-345)||(38086140-38086231)
chr2 (253-331)||(7317634-7317712)
chr2 (254-326)||(38085967-38086038)
chr2 (254-331)||(2059490-2059567)
chr2 (255-320)||(3671822-3671886)
chr2 (254-315)||(13279840-13279901)
chr2 (254-331)||(16115231-16115308)
chr2 (254-345)||(3671996-3672087)
chr2 (1-70)||(5542659-5542728)
chr2 (1-70)||(36178639-36178708)
chr2 (1-70)||(37106243-37106312)
chr2 (1-62)||(14745707-14745770)
chr2 (1-62)||(15880318-15880381)
chr2 (249-311)||(15330444-15330505)
chr2 (254-320)||(31470776-31470841)
chr2 (1-66)||(28254273-28254340)
chr2 (1-69)||(33731703-33731771)
chr2 (1-62)||(36005920-36005983)
chr2 (1-48)||(38796676-38796723)
chr2 (3-62)||(14745334-14745395)
chr2 (1-70)||(5543032-5543101)
chr2 (8-62)||(6421793-6421849)
chr2 (1-70)||(15511529-15511598)
chr2 (1-62)||(41283515-41283578)
chr2 (1-62)||(42514704-42514767)
chr2 (1-48)||(31259672-31259719)
chr2 (1-70)||(6421440-6421509)
chr2 (1-70)||(6422165-6422234)
chr2 (1-69)||(6713031-6713100)
chr2 (1-70)||(37105979-37106048)
chr2 (1-63)||(40733572-40733636)
chr2 (1-62)||(40679669-40679732)
chr2 (1-48)||(962653-962700)
chr2 (1-48)||(37632653-37632700)
chr2 (13-47)||(30312856-30312890)
chr2 (1-60)||(31385792-31385853)
chr2 (253-283)||(36059247-36059277)
chr2 (8-62)||(6421688-6421744)
chr2 (1-46)||(25390326-25390371)
chr2 (1-63)||(30313232-30313296)
chr2 (7-48)||(31468806-31468847)
chr2 (1-70)||(36178205-36178274)
chr2 (4-61)||(30323522-30323581)
chr2 (10-63)||(35580477-35580534)
chr2 (1-62)||(35580764-35580826)
[»] chr8 (49 HSPs)
chr8 (254-347)||(37994879-37994972)
chr8 (252-345)||(41539768-41539861)
chr8 (254-346)||(2814416-2814508)
chr8 (244-346)||(397177-397278)
chr8 (254-331)||(37994708-37994785)
chr8 (253-331)||(44036813-44036891)
chr8 (253-326)||(41539963-41540035)
chr8 (254-334)||(14193509-14193588)
chr8 (253-331)||(2814242-2814319)
chr8 (253-345)||(14193323-14193414)
chr8 (1-70)||(3670115-3670184)
chr8 (270-347)||(25101746-25101823)
chr8 (254-331)||(397007-397083)
chr8 (1-70)||(30441140-30441209)
chr8 (1-62)||(147506-147569)
chr8 (1-48)||(8918820-8918867)
chr8 (1-60)||(9507837-9507898)
chr8 (1-70)||(3038324-3038393)
chr8 (1-70)||(3669742-3669811)
chr8 (310-347)||(44036985-44037022)
chr8 (3-48)||(45123061-45123106)
chr8 (1-62)||(9608800-9608863)
chr8 (1-62)||(45122679-45122742)
chr8 (7-70)||(5915928-5915991)
chr8 (1-48)||(9483243-9483290)
chr8 (1-68)||(33113403-33113470)
chr8 (1-48)||(43274835-43274882)
chr8 (1-70)||(20870607-20870676)
chr8 (1-70)||(30359326-30359395)
chr8 (1-70)||(34834931-34835000)
chr8 (1-70)||(34835264-34835333)
chr8 (1-70)||(34835530-34835599)
chr8 (1-70)||(34835796-34835865)
chr8 (1-70)||(40579540-40579609)
chr8 (1-70)||(45122091-45122160)
chr8 (14-70)||(147888-147944)
chr8 (1-62)||(40518126-40518189)
chr8 (1-48)||(70330-70377)
chr8 (1-44)||(9309034-9309077)
chr8 (6-69)||(32640567-32640630)
chr8 (254-317)||(40587991-40588054)
chr8 (1-47)||(1513972-1514018)
chr8 (1-60)||(45121952-45122013)
chr8 (1-70)||(9482638-9482707)
chr8 (1-41)||(5420706-5420746)
chr8 (7-92)||(6651555-6651636)
chr8 (1-45)||(8794166-8794210)
chr8 (1-62)||(9609140-9609203)
chr8 (1-62)||(30359664-30359727)
[»] chr7 (42 HSPs)
chr7 (254-346)||(7298635-7298727)
chr7 (254-346)||(40521188-40521280)
chr7 (253-347)||(19805585-19805679)
chr7 (254-331)||(19804797-19804874)
chr7 (253-323)||(40521015-40521084)
chr7 (253-322)||(7298833-7298901)
chr7 (257-323)||(46567960-46568025)
chr7 (254-323)||(16979613-16979681)
chr7 (254-323)||(28949001-28949069)
chr7 (1-67)||(23414-23480)
chr7 (280-346)||(46568130-46568196)
chr7 (1-62)||(1085656-1085719)
chr7 (2-70)||(118333-118403)
chr7 (1-48)||(7517635-7517682)
chr7 (1-48)||(22566718-22566765)
chr7 (1-62)||(37533051-37533113)
chr7 (1-70)||(11845246-11845315)
chr7 (1-66)||(16569251-16569316)
chr7 (1-66)||(16596346-16596411)
chr7 (1-70)||(22567073-22567142)
chr7 (1-63)||(30244325-30244389)
chr7 (1-70)||(37533398-37533467)
chr7 (1-70)||(45433296-45433365)
chr7 (1-48)||(6054615-6054662)
chr7 (1-68)||(29157620-29157687)
chr7 (1-61)||(36534825-36534887)
chr7 (1-48)||(45434691-45434738)
chr7 (1-47)||(36939790-36939836)
chr7 (1-63)||(7554080-7554144)
chr7 (1-70)||(19122786-19122855)
chr7 (1-66)||(30245132-30245197)
chr7 (1-66)||(30253547-30253612)
chr7 (1-70)||(40094808-40094877)
chr7 (1-70)||(45754770-45754839)
chr7 (1-63)||(47129150-47129214)
chr7 (1-62)||(24177490-24177553)
chr7 (1-48)||(30032622-30032669)
chr7 (2-48)||(1085304-1085350)
chr7 (1-47)||(40230348-40230394)
chr7 (3-48)||(14681567-14681612)
chr7 (1-62)||(28300293-28300357)
chr7 (1-63)||(34218073-34218137)
[»] scaffold0214 (2 HSPs)
scaffold0214 (258-347)||(11630-11719)
scaffold0214 (254-331)||(11814-11891)
[»] scaffold0140 (2 HSPs)
scaffold0140 (251-322)||(15844-15915)
scaffold0140 (256-285)||(16045-16074)
[»] scaffold0135 (2 HSPs)
scaffold0135 (254-331)||(37446-37523)
scaffold0135 (273-347)||(37617-37691)
[»] scaffold0702 (1 HSPs)
scaffold0702 (1-70)||(548-617)
[»] scaffold0391 (1 HSPs)
scaffold0391 (1-64)||(1729-1794)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-66)||(5412-5477)


Alignment Details
Target: chr3 (Bit Score: 141; Significance: 8e-74; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 33362396 - 33362240
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttgcttgtgtgattgttctaacctccccttagt 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33362396 tataagtaagaggacccataaacccatttccttaagattttgggtaagtgtggcgtctctctcttgcttgcttgtgtgattgttctaacctccctttagt 33362297  T
Q  101 gacccaacatatttattaatacattaaaactcttttgagtttaagattgtccattac 157  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33362296 gacccaacatatttattaatacattaaaactcttttgattttaagattgtccattac 33362240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 252 - 347
Target Start/End: Original strand, 33214441 - 33214536
Alignment:
Q  252 tagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33214441 tagagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 33214536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 249 - 347
Target Start/End: Complemental strand, 27073177 - 27073079
Alignment:
Q  249 ttatagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27073177 ttattgagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 27073079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 36274120 - 36274212
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36274120 gagaaatt-ttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 36274212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 254 - 346
Target Start/End: Complemental strand, 36635502 - 36635410
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  36635502 gagaaattcttgtgtaggaacgaacctaacatatcatttttacaaacaacaaattaaaacatgacacgtcattgttttattttaaaataatta 36635410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 19580580 - 19580483
Alignment:
Q  248 gttatagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  19580580 gttaaagagaaattcttgtataggaacgaacctaacatatcattcttacaaacaacaaattaaaacatgacatgtcattgttttattttaaaataatt 19580483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 253 - 331
Target Start/End: Complemental strand, 33214704 - 33214626
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  33214704 agagaaattcttgtgtaggaacgaacctaacctatcaaccttacaaacaacaaattaaaacatgacacgtcgttgtttt 33214626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 10598810 - 10598885
Alignment:
Q  256 gaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  10598810 gaaattcttgtgtaggaacgaacctaacctatcatctttacaaacaacaaattaaaacatgacacgtcgttgtttt 10598885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 33362206 - 33362144
Alignment:
Q  191 cctccaattatttattaattaaaaaataattaatcgaaattatgttcatgcacataagttata 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33362206 cctccaattatttattaattaaaaaataattaatcgaaattatgttcatgcacataagttata 33362144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 253 - 331
Target Start/End: Complemental strand, 36274390 - 36274312
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||| |||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  36274390 agagaaattcttatgtaggaacgaatctaacctatcatctttacaaacaacaaattaaaacatgacacgtcgttgtttt 36274312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 33219072 - 33219149
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||||||    
T  33219072 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgattcgtcattgtttt 33219149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 252 - 315
Target Start/End: Original strand, 27072911 - 27072974
Alignment:
Q  252 tagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacat 315  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  27072911 tagagaaattcttgtgtaggaacgaacctaatctatcatccttacaaacaacaaattaaaacat 27072974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 316
Target Start/End: Complemental strand, 10599062 - 10599000
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatg 316  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  10599062 gagaaattcttgtgtggaaacgaacctaacatatcatccttacaaacaacaaattaaaacatg 10599000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 345
Target Start/End: Original strand, 11651000 - 11651091
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    ||||||||||||| || |||||||||||||||||||| |||||||||||||| |||||| |||| |  || ||||||| |||||||||||||    
T  11651000 gagaaattcttgtttatgaacgaacctaacatatcattcttacaaacaacaatttaaaatatgatatatcattgttttattttaaaataatt 11651091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 36635241 - 36635305
Alignment:
Q  257 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 322  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||    
T  36635241 aaattcttgtgtaggaacgaacctaac-tatcattgttacaaacaacaaattaaaacatgacacgt 36635305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41359868 - 41359804
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag--tgtggcgtctctctc 63  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||  |||||||||||||||    
T  41359868 tataagtaagaggacccataaacccattgccttaaggttttgggtaagaatgtggcgtctctctc 41359804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 47964621 - 47964557
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  47964621 tataagtgagaggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctctctc 47964557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22304624 - 22304693
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||||| |||  || |||||||||||||    
T  22304624 tataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 22304693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32589758 - 32589827
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| |||   | |||||||||||||    
T  32589758 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctctcttgcttg 32589827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 37990742 - 37990655
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttgcttgtgtgattgttctaacctc 92  Q
    ||||||||||||||| |||||||  ||| ||||||||||||||||||| |||  || |||||||||    ||||||||||||||||| ||||    
T  37990742 tataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttg----cttgtgtgattgttctagcctc 37990655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12114665 - 12114596
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||| |||  || |||||||| ||||    
T  12114665 tataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctctcttacttg 12114596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21832446 - 21832385
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctct 62  Q
    ||||||||||||||| |||||||  ||  ||||||||||||||||||| |||||||||||||    
T  21832446 tataagtaagaggactcataaactcatagccttaaggttttgggtaagagtggcgtctctct 21832385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22304058 - 22303989
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||| ||||||||||||| ||| |||||||||||||| |||| |||  || |||||||||||||    
T  22304058 tataagtaagcggacccataaacccattgccttaaggttttggataagagtgtggtgtctctcttgcttg 22303989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 35946577 - 35946646
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||  |||  || |||||||||||||    
T  35946577 tataagtaagaggacccataaacccgttgccttaaggttttgggtaaaagtgtggtgtctctcttgcttg 35946646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43346894 - 43346825
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||| |||  || |||||||||||||    
T  43346894 tataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 43346825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 54018301 - 54018232
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||| |||  || |||||| ||||||    
T  54018301 tataagtaagaggacccataaacctaacgccttaaggttttgggtaagagtgtggtgtctctcatgcttg 54018232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 22303759 - 22303715
Alignment:
Q  4 aagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||    
T  22303759 aagtaagaggacccataaacccattgccttaaggttttgggtaag 22303715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29645005 - 29644937
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgctt 69  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||| |||  |  ||||||||||||    
T  29645005 tataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggcgtctctcttgctt 29644937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 1634417 - 1634370
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||    
T  1634417 tataagtaagaggacccataaacccattggcttaaggttttgggtaag 1634370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15772909 - 15772996
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttgcttgtgtgattgttctaacctc 92  Q
    |||||||||||||||||||||||  ||| | |||||||||||| |||| |||  || |||||    |||||||||||| |||||||||||||    
T  15772909 tataagtaagaggacccataaactcattgctttaaggttttggataagagtgtggtgtctct----cttgcttgtgtggttgttctaacctc 15772996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33803355 - 33803290
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctct 64  Q
    |||||||||||||||||||||||| ||| | ||||||| |||||||  ||||||||||||| ||||    
T  33803355 tataagtaagaggacccataaacccattgcattaaggtattgggtaagagtgtggcgtctccctct 33803290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8327959 - 8328023
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    |||||||||||| |||||||||| || | |||||||||||||||||  ||||||| |||||||||    
T  8327959 tataagtaagagaacccataaacgtaatgccttaaggttttgggtaagagtgtggtgtctctctc 8328023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32463003 - 32462934
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||| ||| |||||||| ||| ||||||||||||| ||||| |||  || |||||||||||||    
T  32463003 tataagtaagaagactcataaacccattgccttaaggttttgagtaagagtgtggtgtctctcttgcttg 32462934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42342193 - 42342124
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||| |||||||  ||| ||||||||||||||||||| |||  |  |||||||||||||    
T  42342193 tataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggcgtctctcttgcttg 42342124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 54017919 - 54017850
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||| ||||||||||   ||||||||||||||||||| |||  || |||||||| ||||    
T  54017919 tataagtaagaggactcataaacctaacgccttaaggttttgggtaagagtgtggtgtctctcttacttg 54017850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15773247 - 15773336
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttgcttgtgtgattgttctaacctc 92  Q
    ||||||||||||||| ||||| |  ||| |||||| |||||||||||| |||     | ||||||||||||||||||| |||||||||||||    
T  15773247 tataagtaagaggactcataagctcattgccttaaagttttgggtaagagtg--tgatgtctcttgcttgcttgtgtggttgttctaacctc 15773336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29644684 - 29644616
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgctt 69  Q
    |||||||||||| ||||||||||| |||  |||||||||||||||||| |||  |  ||||||||||||    
T  29644684 tataagtaagagaacccataaacccattgtcttaaggttttgggtaagagtgtggcgtctctcttgctt 29644616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37991080 - 37991012
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgctt 69  Q
    |||||||||||||||| ||||||  ||  ||||||||||||||||||| |||  || ||||||||||||    
T  37991080 tataagtaagaggacctataaactcatcgccttaaggttttgggtaagagtgtggtgtctctcttgctt 37991012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42342491 - 42342428
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||||||||||||| | |||  ||||||||||||||||  |||||| |||||||||    
T  42342491 tataagtaagaggacccataaatccattgtcttaaggttttgggtaagagtgtgacgtctctct 42342428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52634731 - 52634793
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||||  |||||| |||||||||    
T  52634731 tataagtaagag-acccataaacccattgccttaaggttttgggtaagagtgtgacgtctctct 52634793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 39389131 - 39389172
Alignment:
Q  7 taagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||| |||  ||||||||||||||||||    
T  39389131 taagaggacccataaacccattgtcttaaggttttgggtaag 39389172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39935058 - 39934989
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||| ||||||||| ||| |||||| |||||| ||||| |||   | |||||||||||||    
T  39935058 tataagtaagaggatccataaacccattgccttaaagttttgagtaagagtgtgatgtctctcttgcttg 39934989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 45395756 - 45395692
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    |||||||||||||| ||||||||| |||  ||||| ||||||||||  ||||||| |||||||||    
T  45395756 tataagtaagaggatccataaacccattgtcttaatgttttgggtaagagtgtggtgtctctctc 45395692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25739528 - 25739465
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||||||||||||||  ||| | || ||||||||||||  |||||| |||||||||    
T  25739528 tataagtaagaggacccataaactcattgcttttaggttttgggtaagagtgtgacgtctctct 25739465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32462661 - 32462598
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||||||| || ||||||||||||| | |||||||||||| ||  ||||||| ||||||||    
T  32462661 tataagtaagatgatccataaacctattgctttaaggttttggataagagtgtggggtctctct 32462598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 33022431 - 33022339
Alignment:
Q  255 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33022431 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 33022339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 21389021 - 21389113
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  21389021 gagaaattcttctgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacatgatacgtcattgttttattttaaaataatta 21389113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 331
Target Start/End: Original strand, 33022162 - 33022241
Alignment:
Q  252 tagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33022162 tagagaaattattgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 33022241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 7789933 - 7789842
Alignment:
Q  255 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||    
T  7789933 agaaattcttgtgtaggaatgaacctaacatatcattcttacaaacaacaaattaaaacatgacacgtcattgtttttttaaaaaataatta 7789842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 21389282 - 21389217
Alignment:
Q  257 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  21389282 aaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtc 21389217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 336
Target Start/End: Original strand, 7789678 - 7789748
Alignment:
Q  265 gtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttctttt 336  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| ||||||| ||||    
T  7789678 gtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacatgtcattgttttttttt 7789748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 28472624 - 28472535
Alignment:
Q  255 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataat 344  Q
    ||||||| || ||||||||||||||||| |||||||  ||| ||||||||||||||| ||| ||||||  || |||||||||||||||||    
T  28472624 agaaatttttatgtaggaacgaacctaatatatcatttttataaacaacaaattaaatcataacacgttatttttttcttttaaaataat 28472535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29518558 - 29518627
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| |||  || |||||||||||||    
T  29518558 tataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctcttgcttg 29518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29518975 - 29519044
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| |||  || |||||||||||||    
T  29518975 tataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctcttgcttg 29519044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32741234 - 32741303
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| |||  || |||||||||||||    
T  32741234 tataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctctcttgcttg 32741303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16454962 - 16455025
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  16454962 tataagtaataggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctctct 16455025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2377809 - 2377878
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| |||  || ||| |||||||||    
T  2377809 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctttcttgcttg 2377878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3409314 - 3409383
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||||| |||  || |||||||||||||    
T  3409314 tataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 3409383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3415513 - 3415582
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||| |||  || |||||||||||||    
T  3415513 tataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctcttgcttg 3415582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10074094 - 10074030
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggt--aagtgtggcgtctctctc 63  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||  |||||||| |||||||||    
T  10074094 tataagtaagaggacccataaacccattgccttaaggttttgggtaaaagtgtggtgtctctctc 10074030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16107733 - 16107802
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||||||| |||  || |||||||||||||    
T  16107733 tataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 16107802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1127415 - 1127478
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||  ||||||||||||||||    
T  1127415 tataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgtctctct 1127478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 29859813 - 29859723
Alignment:
Q  255 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacg-tcgttgttttcttttaaaataat 344  Q
    ||||||| || ||||||||||||||||| |||||||  ||| ||||||||||||||| ||| ||||| |  || |||||||||||||||||    
T  29859813 agaaatttttatgtaggaacgaacctaatatatcatttttataaacaacaaattaaatcataacacgttattttttttcttttaaaataat 29859723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2378181 - 2378250
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||||  ||  || |||||||||||||    
T  2378181 tataagtaagaggacccataaacccattaccttaaggttttaggtaagaatgtggtgtctctcttgcttg 2378250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2578546 - 2578477
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||| |||  || ||||| |||||||    
T  2578546 tataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctcttttgcttg 2578477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3058281 - 3058350
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||| ||||| ||||||||| ||| ||||||||||||||||||| |||  || |||||||||||||    
T  3058281 tataagtatgaggatccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 3058350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10074466 - 10074402
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||  ||||||| |||||||||    
T  10074466 tataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctctc 10074402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16454630 - 16454693
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||||||||||||||| ||| ||||||| |||||| ||  ||||||||||||||||    
T  16454630 tataagtaagaggacccataaacccattgccttaagattttggataagagtgtggcgtctctct 16454693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32460683 - 32460636
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  32460683 tataagtaagaggactcataaacccattgccttaaggttttgggtaag 32460636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35210259 - 35210306
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||||    
T  35210259 tataagtaagaggacccataaaaccattgccttaaggttttgggtaag 35210306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2843609 - 2843679
Alignment:
Q  1 tataagtaagaggaccc-ataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||||| ||||||  ||| ||||||||||||||||||| |||  || |||||||||||||    
T  2843609 tataagtaagaggaccccataaactcattgccttaaggttttgggtaagagtgtggtatctctcttgcttg 2843679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2579975 - 2579906
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| |   |||||||||||||||||||  ||  || |||||||||||||    
T  2579975 tataagtaagaggacccataaacccacagccttaaggttttgggtaagaatgtggtgtctctcttgcttg 2579906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3409715 - 3409784
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| |||| |  ||||||||||| |||  || |||||||||||||    
T  3409715 tataagtaagaggacccataaacccattgcctttattttttgggtaagagtgtggtgtctctcttgcttg 3409784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 593812 - 593741
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||| |||||||| | | |||||||||||||||||  |||||||  |||||||||| ||||    
T  593812 tataagtaagaggactcataaaccgactgccttaaggttttgggtaatagtgtggtatctctctcttacttg 593741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2579595 - 2579508
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggt--aagtgtggcgtctctctcttgcttgcttgtgtgattgttctaacctc 92  Q
    ||||||||||||| |||||||||  ||| ||||||||||||||||  |||| ||| ||||||      |||||||||||| |||||||||||||    
T  2579595 tataagtaagagggcccataaactcattgccttaaggttttgggtaaaagtatggtgtctct------cttgcttgtgtggttgttctaacctc 2579508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 12071784 - 12071730
Alignment:
Q  11 aggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    ||||| |||||||||||  |||||||||||||||||  |||||||||||||||||    
T  12071784 aggactcataaacctatgaccttaaggttttgggtaagagtgtggcgtctctctc 12071730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1846803 - 1846872
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||| ||||||||| | ||| |||||||||||||| |||| |||  || ||||| |||||||    
T  1846803 tataagtaagagcacccataaatccattgccttaaggttttggataagagtgtggtgtctcttttgcttg 1846872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2578938 - 2578869
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||| |||||||| ||||||||  ||| ||||||||||||||||||| |||  || ||||| |||||||    
T  2578938 tataaataagaggatccataaactcattaccttaaggttttgggtaagagtgtggtgtctcttttgcttg 2578869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26544104 - 26544173
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| |   ||||||||||||| ||||| |||   | |||||||||||||    
T  26544104 tataagtaagaggacccataaacccaccgccttaaggttttgagtaagagtgtgatgtctctcttgcttg 26544173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 16108118 - 16108154
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaagg 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  16108118 tataagtaagaggacccataaacccattgccttaagg 16108154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 8323975 - 8323879
Alignment:
Q  251 atagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8323975 atagtgaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 8323879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 253 - 347
Target Start/End: Complemental strand, 26534763 - 26534669
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26534763 agagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 26534669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 791592 - 791709
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattatnnnnnn 353  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  791592 gagaaatttttgtgtaggaacgaacctaacctaccatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattataaaaaa 791691  T
Q  354 ntaaattaactagtcctt 371  Q
     |||||||||||||||||    
T  791692 ataaattaactagtcctt 791709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 130512 - 130419
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  130512 gagaaattcttttgtagtaacgaacctaacctatcatccttacaaacaacaaattaaaacataacacgtcgttgttttcttttaaaataattat 130419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 254 - 346
Target Start/End: Complemental strand, 33377912 - 33377820
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  33377912 gagaaattcttatgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacatgacacgtcattgttttattttaaaataatta 33377820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 257 - 347
Target Start/End: Complemental strand, 42630968 - 42630878
Alignment:
Q  257 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  42630968 aaattcttgtgtaggcacgaacctaacctatcatccttacaaacaataaattaaaatatgacacgtcgttgttttcttttaaaataattat 42630878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 253 - 346
Target Start/End: Complemental strand, 5146768 - 5146675
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  5146768 agagaaattcttgtgtagaaacgaacctaatatatcattcttacaaacaacaaattaaaacatgacacgtcattgttttattttaaaataatta 5146675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 26534506 - 26534583
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  26534506 gagaaattcttgtgtaggaacgaacctaacctatcaaccttacaaacaacaaattaaaacatgacacgtcgttgtttt 26534583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 8489122 - 8489214
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    |||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  8489122 agagaaattcttgtgtaggaacaaatctaacatatcattcttacaaacaacaaattaaaatatgacacgtcattgttttattttaaaataatt 8489214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 254 - 346
Target Start/End: Complemental strand, 13823412 - 13823320
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  13823412 gagaaattcttgtgtaggaacgaacttaacatatcatttttacaaataacaaattaaaacatgacacgtcattgttttattttaaaataatta 13823320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 254 - 345
Target Start/End: Original strand, 6518203 - 6518294
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  || ||| ||||||| |||||||||||||    
T  6518203 gagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacattgcatgtcattgttttattttaaaataatt 6518294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 254 - 345
Target Start/End: Complemental strand, 19899018 - 19898927
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    |||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  19899018 gagaaattcttgtgtaggaacgaacctaacatatcatttttataaacaacaaattaaaacatgacatgtcattgttttattttaaaataatt 19898927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 130253 - 130331
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    ||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||    
T  130253 agagaaattcttgtgtaggaacgaacctaacctgtcaaccttacaaacaacaaattaaaacatgacacgtcgttgtttt 130331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 8323707 - 8323784
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||    
T  8323707 gagaaattcttgtgtaggaacgaacctaacctatcatctttacaaacaataaattaaaacatgacacgtcgttgtttt 8323784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 228717 - 228809
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    ||||||||  ||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||  ||||||| ||||||||||||||    
T  228717 gagaaattactgtgtaggaacgaacctaacatatcattcttataaacaataaattaaaacatgacacgttattgttttattttaaaataatta 228809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 257 - 345
Target Start/End: Complemental strand, 35454710 - 35454623
Alignment:
Q  257 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||  || |||||||||    
T  35454710 aaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtcattgttttagttaaaaataatt 35454623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 42630711 - 42630788
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| || |||||||    
T  42630711 gagaaattcttgtgtatgaacgaacctaacctatcatccttacaaacaacaaactaaaacatgacacttcattgtttt 42630788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 345
Target Start/End: Original strand, 40881792 - 40881881
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    |||||||| |||||||||||||||||||||||   || ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  40881792 gagaaattgttgtgtaggaacgaacctaacatt--attcttacaaacaataaattaaaacatgacacgtcattgttttattttaaaataatt 40881881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 14069860 - 14069928
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 322  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  14069860 agagaaattcttgtgtaggaacgaacctaac-tatcattcttataaacaacaaattaaaacatgacacgt 14069928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 14388583 - 14388515
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    ||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||    
T  14388583 gagaaattcttgtgtaggaacaaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtc 14388515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 323
Target Start/End: Original strand, 35454451 - 35454519
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  35454451 gagaaattcttgtgtatgaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtc 35454519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 19897228 - 19897293
Alignment:
Q  257 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  19897228 aaattattgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtc 19897293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 345
Target Start/End: Complemental strand, 40882066 - 40881992
Alignment:
Q  271 gaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    ||||||| |||||||||||| ||||||||||||||||||||| |||||||||  ||||||| |||||||||||||    
T  40882066 gaacgaatctaacatatcattcttacaaacaacaaattaaaatatgacacgttattgttttattttaaaataatt 40881992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 791867 - 791810
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaa 311  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  791867 gagaaattcttgtgtaggaacgaacctaacctatcatctttacaaacaacaaattaaa 791810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 322
Target Start/End: Original strand, 5146504 - 5146571
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 322  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  5146504 gagaaattattgtgtaggaacgaacctaac-tatcattcttacaaacaataaattaaaacatgacacgt 5146571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13415863 - 13415794
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||  |  |||||||||||||    
T  13415863 tataagtaagaggacccataaacctattaccttaaggttttgggtaagagtgtggcgtctctcttgcttg 13415794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 13823149 - 13823233
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaa 338  Q
    ||||||||||||||||||||||||||||||| |||||| | || |||||| ||| |||||||||||||||  || |||||||||||    
T  13823149 agagaaattcttgtgtaggaacgaacctaac-tatcattcgtataaacaataaactaaaacatgacacgtattttttttcttttaa 13823233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 6518467 - 6518404
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatga 317  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||| ||||    
T  6518467 agagaaattcttgtgtagtaacgaacctaac-tatcattcttacaaacaacaaattaaaatatga 6518404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25327990 - 25328056
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgc 67  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||| |||  || ||||||||||    
T  25327990 tataagtaagaggacccataaacctaatgccttaaggttttgggtaagagtgtggtgtctctcttgc 25328056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1028620 - 1028556
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||  |||||||||||||||||    
T  1028620 tataagtaagaggacccataaacctataaccttaaggtttttggtaagagtgtggcgtctctctc 1028556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18603223 - 18603154
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| |||  |  |||||||||||||    
T  18603223 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcatctctcttgcttg 18603154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 26074667 - 26074731
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||  ||||||| |||||||||    
T  26074667 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctc 26074731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 27319716 - 27319643
Alignment:
Q  269 aggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaata 342  Q
    |||||| || |||||||||||| ||||||||||||||||||||| |||| || || ||||||| ||||||||||    
T  27319716 aggaaccaatctaacatatcattcttacaaacaacaaattaaaatatgaaacatcattgttttattttaaaata 27319643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 40296418 - 40296349
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||| |||  || |||||||||||||    
T  40296418 tataagtaagaggacccataaacccattgccttgaggttttgggtaagagtgtggtgtctctcttgcttg 40296349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32487448 - 32487495
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  32487448 tataagtaagaggacccataaacccattgccttaaggttttgggtaag 32487495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41170689 - 41170736
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  41170689 tataagtaagaggacccataaacccattgccttaaggttttgggtaag 41170736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26074885 - 26074821
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta---agtgtggcgtctctct 62  Q
    |||||||| |||||||||||||||||||  ||||||||||||||||   ||||||||||||||||    
T  26074885 tataagtaggaggacccataaacctattgtcttaaggttttgggtaaagagtgtggcgtctctct 26074821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26075265 - 26075219
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaa 47  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  26075265 tataagtaagaggacccataaacccattgccttaaggttttgggtaa 26075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6500505 - 6500574
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||||  |||||| ||| ||||||||||||||||||| |||  || |||||||||||||    
T  6500505 tataagtaagaggacctttaaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 6500574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9498757 - 9498692
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttg 66  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||||| |||  || |||||||||    
T  9498757 tataagtaagaggacccataaacccattgccttaagattttgggtaagagtgtggtgtctctcttg 9498692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11417080 - 11417011
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||| ||||||||| ||| ||||||||||||| ||||| |||   |||||||||||||||    
T  11417080 tataagtaagaggatccataaacccattgccttaaggttttgtgtaagagtgtgatctctctcttgcttg 11417011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27502139 - 27502070
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||||||| ||||||| |||| |||||  |||  || |||||||||||||    
T  27502139 tataagtaagaggacccataaacctattgccttaagatttttggtaaaagtgtggtgtctctcttgcttg 27502070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34753128 - 34753059
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||| |||  |  |||||||||||||    
T  34753128 tataagtaagaagacccataaaccgattgccttaaggttttgggtaagagtgtggcgtctctcttgcttg 34753059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15370457 - 15370520
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||||||||||||||| ||  ||||||||||||| |||  ||||||||||||||||    
T  15370457 tataagtaagaggacccataaacccatagccttaaggttttgcgtaagagtgtggcgtctctct 15370520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 229044 - 228987
Alignment:
Q  257 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacat 315  Q
    ||||| |||||||| ||||||| |||| |||||| ||||||||||||||||||||||||    
T  229044 aaatttttgtgtagaaacgaacataac-tatcattcttacaaacaacaaattaaaacat 228987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3295447 - 3295405
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgg 43  Q
    |||||||||||||||||||||||| ||| ||||||||||||||    
T  3295447 tataagtaagaggacccataaaccaattgccttaaggttttgg 3295405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15370154 - 15370223
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||| | |   ||||||||||||||||||| |||  || |||||||||||||    
T  15370154 tataagtaagaggacccataaatccacagccttaaggttttgggtaagagtgtggtgtctctcttgcttg 15370223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41632837 - 41632906
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| | | | ||||| ||||||||||| |||  || |||||||||||||    
T  41632837 tataagtaagaggacccataaacccaatgctttaagattttgggtaagagtgtggtgtctctcttgcttg 41632906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3295118 - 3295055
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||||||| |||||||||||| ||| |||| ||||||||||||  ||||||| ||||||||    
T  3295118 tataagtaagaagacccataaacccattgccttgaggttttgggtatgagtgtggtgtctctct 3295055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 26074244 - 26074185
Alignment:
Q  6 gtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    |||||||||||||| |||| ||| |||||||||||||||||  ||||||| |||||||||    
T  26074244 gtaagaggacccatgaacccattgccttaaggttttgggtaagagtgtggtgtctctctc 26074185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36568670 - 36568603
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctcttg 66  Q
    ||||||| ||| ||||| |||||| ||| |||||||||||| ||||  ||||||||||||||||||||    
T  36568670 tataagtgagatgacccgtaaacccattgccttaaggtttttggtaagagtgtggcgtctctctcttg 36568603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 36521991 - 36521952
Alignment:
Q  9 agaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  36521991 agaggacccataaaccaattgccttaaggttttgggtaag 36521952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 624251 - 624315
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    ||||||||||| |||||||||||| ||  |||| ||||||||||||  ||||||| |||||||||    
T  624251 tataagtaagatgacccataaacccatagccttgaggttttgggtaagagtgtggtgtctctctc 624315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 2411064 - 2411109
Alignment:
Q  3 taagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||| |||||||||| |||| ||||||||||||| |||||    
T  2411064 taagtaagagaacccataaacttattgccttaaggttttgagtaag 2411109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36492320 - 36492251
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||| ||||||  ||| |||| ||||||||| |||| |||  || |||||||||||||    
T  36492320 tataagtaagaggaccaataaacacattacctttaggttttggataagagtgtggtgtctctcttgcttg 36492251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36522340 - 36522276
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    ||||||| |||||||| ||||||| |||  ||||||||||||||||  ||||||| |||||||||    
T  36522340 tataagtgagaggaccaataaacccattatcttaaggttttgggtaagagtgtggtgtctctctc 36522276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 29549358 - 29549290
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgctt 69  Q
    ||||||||||| |||||||||||  ||| |||||||||||||| |||| |||  |  ||||||||||||    
T  29549358 tataagtaagaagacccataaacacattaccttaaggttttggataagagtgtggcgtctctcttgctt 29549290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 42405696 - 42405652
Alignment:
Q  4 aagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||| ||||| |||||||||| | |||||||||||||||||||    
T  42405696 aagtaaaaggactcataaacctaatgccttaaggttttgggtaag 42405652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 40534227 - 40534134
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40534227 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 40534134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 3102804 - 3102711
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3102804 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttttttttaaaataattat 3102711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 249 - 345
Target Start/End: Complemental strand, 18936946 - 18936850
Alignment:
Q  249 ttatagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  18936946 ttatagagaaattcttgtctaggaacgaacctaatatatcattcttacaaacaataaattaaaacatgacacgtcattgttttattttaaaataatt 18936850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 3102530 - 3102617
Alignment:
Q  244 ataagttatagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  3102530 ataaattaaagagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgatacgtcgttgtttt 3102617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 250 - 331
Target Start/End: Original strand, 13690211 - 13690292
Alignment:
Q  250 tatagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  13690211 tataaagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgatacgtcgttgtttt 13690292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 37177891 - 37177799
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||||||||    
T  37177891 agagaaattcttgtctaggaacgaacataacatatcattcttacaaacaacaaattaaaacatgatacgtcattgttttattttaaaataatt 37177799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 40533962 - 40534040
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||    
T  40533962 agagaaattcttgtgtaggaacgaacctaacctatcattcttacaaacaacaaattaaaacatgatacgtcgttgtttt 40534040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 9231580 - 9231657
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||    
T  9231580 gagaaattcttgtgtaggaacgaacctagcctaccatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 9231657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 250 - 323
Target Start/End: Original strand, 11147010 - 11147083
Alignment:
Q  250 tatagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  11147010 tatagagaaattcttgtgtaggaacgaacctaatatatcattcttacaaacaacaaattaaaacatgacacgtc 11147083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 273 - 347
Target Start/End: Complemental strand, 9231825 - 9231751
Alignment:
Q  273 acgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  9231825 acgaacctaacctatcatccttacaaacaacaaattaaaacatgctacgtcgttgttttcttttaaaataattat 9231751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 18381574 - 18381488
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaa 339  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| || ||||||| |||||||    
T  18381574 agagaaattcttgtgtaggaacgaacctaacatttcattcttacaagcaacaaattaaaacatgacacatcattgttttattttaaa 18381488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 320
Target Start/End: Complemental strand, 5121072 - 5121005
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 320  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  5121072 agagaaattcttgtgtaggaacaaacctaacatatcattcttacaaacaacaaattaaaacatgacac 5121005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 334
Target Start/End: Original strand, 18936675 - 18936755
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttctt 334  Q
    ||||||||||||||||| |||||||| |||| |||||| |||||||||||||||||||||||||| ||||| || |||||||    
T  18936675 agagaaattcttgtgtatgaacgaacataac-tatcattcttacaaacaacaaattaaaacatgatacgtcatttttttctt 18936755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 50630856 - 50630787
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| |||  || |||||||||||||    
T  50630856 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 50630787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31691207 - 31691278
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||  |||||||||||| |||||||||||    
T  31691207 tataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggcgtctatctcttgcttg 31691278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22028062 - 22027998
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag--tgtggcgtctctctc 63  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||  ||||| |||||||||    
T  22028062 tataagtaagaggacccataaacatattgccttaaggttttgggtaagaatgtggtgtctctctc 22027998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25483391 - 25483460
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||| ||||||||| ||| ||||||||||||||||||| |||  || |||||||||||||    
T  25483391 tataagtaagaggatccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 25483460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36629292 - 36629361
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||||| |||  || |||||||||||||    
T  36629292 tataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 36629361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41370412 - 41370481
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||| |||  || |||||||||||||    
T  41370412 tataagtaagaggacccataaacccattgccttaaagttttgggtaagagtgtagtgtctctcttgcttg 41370481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4955418 - 4955355
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||  ||||||||||||||||    
T  4955418 tataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggcgtctctct 4955355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3271842 - 3271889
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  3271842 tataagtaagagaacccataaacctattgccttaaggttttgggtaag 3271889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 18879861 - 18879908
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||    
T  18879861 tataagtaagatgacctataaacctatttccttaaggttttgggtaag 18879908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 54936253 - 54936315
Alignment:
Q  3 taagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    |||||||||||||||||||||| ||| |||||||||||||||||  ||||||| |||||||||    
T  54936253 taagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctc 54936315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1731748 - 1731679
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||| |||  || | |||||||||||    
T  1731748 tataaataagaggacccataaaccaattgccttaaggttttgggtaagagtgtggtgtttctcttgcttg 1731679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3340862 - 3340931
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||| |||  || ||| |||||||||    
T  3340862 tataagtaagaggacccataaacccactgccttaaggttttgggtaagagtgtggtgtctttcttgcttg 3340931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22183365 - 22183301
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    ||||||||| |||||||||||||| ||| |||||||||||||| ||  |||||||||||||||||    
T  22183365 tataagtaaaaggacccataaacccattgccttaaggttttggataagagtgtggcgtctctctc 22183301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39404453 - 39404522
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||  ||  || |||||||||||||    
T  39404453 tataagtaagaggacccataaacctatagccttaaggttttgggcaagaatgtggtgtctctcttgcttg 39404522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 44620715 - 44620783
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||| |||  || |||||||||||||    
T  44620715 tataagtaagaggacccataaacc-ataaccttaaggttttgggtaagagtgtggtttctctcttgcttg 44620783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 54108968 - 54109036
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||| |||  || |||||||||||||    
T  54108968 tataagtaagaggacccataaacccattgccttaa-gttttgggtaagagtgtggtgtctctcttgcttg 54109036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 55933225 - 55933156
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||| |||  || |||||||| ||||    
T  55933225 tataagtaagaggacccataaacccattgccttaaagttttgggtaagagtgtggtgtctctcttacttg 55933156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 49302964 - 49303008
Alignment:
Q  4 aagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||    
T  49302964 aagtaagaggacccataaacccattgccttaaggttttgggtaag 49303008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 54017696 - 54017628
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgctt 69  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||| |||   | ||||||||||||    
T  54017696 tataagtaagaggacccataaacccattgccttaaggttttaggtaagagtgtgatgtctctcttgctt 54017628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 49880215 - 49880262
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||||| | | |||||||||||||||||||    
T  49880215 tataagtaagaggacccataaacccactgccttaaggttttgggtaag 49880262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18932850 - 18932781
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||| |||||||||||||||||| ||| |||||||||||| |||||| |||  || |||||||| ||||    
T  18932850 tataaataagaggacccataaacccattgccttaaggttttaggtaagagtgtggtgtctctcttacttg 18932781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 45496860 - 45496929
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||| ||||||  |||  |||||||||||||||||| |||  || |||||||||||||    
T  45496860 tataagtaagaggacctataaactcattgtcttaaggttttgggtaagagtgtggtgtctctcttgcttg 45496929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43174562 - 43174625
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||||||||||| |||||||||||  |||||| || |||||||  ||||||||||||||||    
T  43174562 tataagtaagaggacacataaacctatgaccttaaagtgttgggtaagagtgtggcgtctctct 43174625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 52884942 - 52885009
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggtttt-gggtaag--tgtggcgtctctctctt 65  Q
    |||||||||||||| ||||||||| ||| |||||||||||| |||||||  ||||| |||||||||||    
T  52884942 tataagtaagaggatccataaacccattgccttaaggttttggggtaagaatgtggtgtctctctctt 52885009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2741126 - 2741173
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||  | ||| |||||||||||||||||||    
T  2741126 tataagtaagaggacccataactccattgccttaaggttttgggtaag 2741173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23817782 - 23817715
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgct 68  Q
    ||||||||||||||  |||||||  ||| ||||||||||||||||||| |||  || |||||||||||    
T  23817782 tataagtaagaggattcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgct 23817715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 50002483 - 50002550
Alignment:
Q  3 taagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||| | |||  |||||||||||||||||| |||  || |||||||| ||||    
T  50002483 taagtaagaggacccataaatccattgtcttaaggttttgggtaagagtgtggtgtctctcttacttg 50002550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16889637 - 16889550
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttgcttgtgtgattgttctaacctc 92  Q
    ||||||||||||||  |||||||||| | |||||| |||||||||||| ||   || |||||    ||| ||||||||||||||||||||||    
T  16889637 tataagtaagaggattcataaacctactgccttaaagttttgggtaagagtatggtgtctct----cttccttgtgtgattgttctaacctc 16889550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3244552 - 3244488
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag--tgtggcgtctctctc 63  Q
    |||||||||||||||||||||||  |||  ||||| ||||||||||||  |||| ||||||||||    
T  3244552 tataagtaagaggacccataaactcattgtcttaaagttttgggtaagaatgtgtcgtctctctc 3244488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 19504758 - 19504810
Alignment:
Q  8 aagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtct 58  Q
    ||||||||||||||| ||||| |||||| ||||||||||  ||||||||||||    
T  19504758 aagaggacccataaatctattgccttaaagttttgggtaagagtgtggcgtct 19504810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 22028466 - 22028401
Alignment:
Q  5 agtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||  |||  ||||| |||||||||||| |||  || |||||||||||||    
T  22028466 agtaagaggacccataaactcattgtcttaatgttttgggtaagagtgtggtgtctctcttgcttg 22028401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28034284 - 28034348
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag--tgtggcgtctctctc 63  Q
    ||||||| |||| |||||||||| |||| | |||||||||| ||||||  |||||||||||||||    
T  28034284 tataagtgagagaacccataaacttattgctttaaggttttaggtaagagtgtggcgtctctctc 28034348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39792961 - 39792892
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||| ||||||| || |||||  ||| ||||||||||||||||||| |||  || |||||||||||||    
T  39792961 tataagaaagaggaaccgtaaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 39792892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 50459776 - 50459845
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||| |||||||| |||  ||||||||||| |||||| | |  || |||||||||||||    
T  50459776 tataagtaagaggactcataaacccattatcttaaggttttaggtaagagcgtggtgtctctcttgcttg 50459845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2891923 - 2891879
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggt 45  Q
    |||||||||||||| ||||||||||| |  |||||||||||||||    
T  2891923 tataagtaagaggatccataaacctaatgtcttaaggttttgggt 2891879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6975557 - 6975494
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag--tgtggcgtctctct 62  Q
    ||||||||||||||| |||||| | |||  |||||| |||||||||||  ||||||||||||||    
T  6975557 tataagtaagaggactcataaatccattatcttaagattttgggtaagagtgtggcgtctctct 6975494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34646750 - 34646687
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||| ||||||||| |||||||  ||| |||||||||||||||||  ||||||| ||||||||    
T  34646750 tataactaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctct 34646687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36572074 - 36572118
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggt 45  Q
    ||||||||||| |||||||||| | ||| ||||||||||||||||    
T  36572074 tataagtaagaagacccataaatccattgccttaaggttttgggt 36572118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 36608761 - 36608698
Alignment:
Q  2 ataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    ||||||||||||| ||||||| | |||  ||||||||||||||||  ||||||| |||||||||    
T  36608761 ataagtaagaggatccataaatccattgtcttaaggttttgggtaagagtgtggtgtctctctc 36608698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39404073 - 39404136
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||||||||||| |||||||  ||  | |||||||||||||||  ||||||||||||||||    
T  39404073 tataagtaagaggactcataaactcatagcattaaggttttgggtaagagtgtggcgtctctct 39404136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 8e-43; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 10227712 - 10227829
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattatnnnnnn 353  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  10227712 gagaaattcttgtgtaggaacgaacctaacctaccatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattataaaaaa 10227811  T
Q  354 ntaaattaactagtcctt 371  Q
     |||||||||||||||||    
T  10227812 ataaattaactagtcctt 10227829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 26552256 - 26552163
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26552256 gagaaattcttgtgtaggatcgaacctaacctatcatccttacaaacaacaaattaaaatatgacacgtcgttgttttcttttaaaataattat 26552163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 23346416 - 23346510
Alignment:
Q  251 atagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| || |||| |||||||||||||    
T  23346416 atagagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaataaattaaaacatgacacgtcatttttttattttaaaataatt 23346510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 254 - 345
Target Start/End: Complemental strand, 48871501 - 48871410
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| ||||||| |||||||||||||    
T  48871501 gagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacattgcacgtcattgttttattttaaaataatt 48871410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 19059378 - 19059451
Alignment:
Q  258 aattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19059378 aattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 19059451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 28217784 - 28217692
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| || ||||||| |||||||||||||    
T  28217784 agagaaattattgtgtaggaacgaacctaacatatcattcttacaaacaacaaatcaaaacatgacacatcattgttttattttaaaataatt 28217692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 50892963 - 50893055
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    |||||||| |||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  50892963 gagaaatttttgtgtagcaacgaacttaacatatcattcttacaaacaacaaattaaaacatgacacgtcattgttttattttaaaataatta 50893055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 347
Target Start/End: Complemental strand, 19059633 - 19059549
Alignment:
Q  263 ttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||||||||    
T  19059633 ttgtgtaggaacgaacctaacctatcatccttataaagaacaaattaaaatatgacacatcgttgttttcttttaaaataattat 19059549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 253 - 320
Target Start/End: Complemental strand, 10227977 - 10227910
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 320  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10227977 agagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacac 10227910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 39669321 - 39669230
Alignment:
Q  255 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||    
T  39669321 agaaattcttgtgtagaaacgaacttaacatatcattcttacaaagaacaaattaaaacatgacacgttattgttttattttaaaataatta 39669230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 41833874 - 41833966
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    ||||||||||||| ||| |||||| |||| ||||||| |||||| ||||||||||||||||||||||||| || |||| ||||||||||||||    
T  41833874 gagaaattcttgtatagaaacgaatctaatatatcattcttacacacaacaaattaaaacatgacacgtcattattttattttaaaataatta 41833966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 26551992 - 26552067
Alignment:
Q  256 gaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  26551992 gaaattcttgtgtaggaacgaatctaacctatcatccttacaaacaaaaaattaaaatatggcacgtcgttgtttt 26552067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 48752657 - 48752589
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  48752657 gagaaattcttgtgtatgaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtc 48752589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 341
Target Start/End: Original strand, 50904992 - 50905080
Alignment:
Q  255 agaaattcttgtgtaggaacgaacctaacatat--catccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaat 341  Q
    |||||||||||||||||||||||||||| ||||  |||  ||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  50904992 agaaattcttgtgtaggaacgaacctaatatatatcatttttacaaacaacaagttaaaacatgacacgtcattgttttattttaaaat 50905080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 7062034 - 7062098
Alignment:
Q  281 aacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  7062034 aacatatcattcttacaaacaacaaattaaaacatgacacgtcattgttttattttaaaataatt 7062098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 28217529 - 28217598
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    |||||||||| |||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  28217529 agagaaattcctgtgtaggaacgaacctaat-tatcattcttacaaacaacaaattaaaacatgacacgtc 28217598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 48871247 - 48871312
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 320  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  48871247 gagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaataacaaattaaaacatgacac 48871312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 50893226 - 50893161
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 320  Q
    |||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  50893226 gagaaattcttgtgtaggaacgaacctaac-tatcattattacaaacaacaaattaaaacatgacac 50893161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 323
Target Start/End: Original strand, 42180571 - 42180639
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    |||||||||||||||||||||||||||||| || |||  |||||||||||||||||||||||||||||||    
T  42180571 gagaaattcttgtgtaggaacgaacctaac-tagcattattacaaacaacaaattaaaacatgacacgtc 42180639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 323
Target Start/End: Complemental strand, 7062261 - 7062192
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    ||||||||| ||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||||    
T  7062261 agagaaatttttgtgtaggaacgaacctaac-tatcatttttacaaacaacaaattaaaatatgacacgtc 7062192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 323
Target Start/End: Original strand, 4156892 - 4156960
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||| || ||||||||||||||||||||    
T  4156892 gagaaattcttgtgtaggaaggaacctaac-tatcattcttacaaataataaattaaaacatgacacgtc 4156960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 41834139 - 41834071
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    ||||||||||||||||||||||||| |||| || |||  |||||||||||||||||||||||||||||||    
T  41834139 gagaaattcttgtgtaggaacgaacataac-tagcattattacaaacaacaaattaaaacatgacacgtc 41834071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 50905175 - 50905107
Alignment:
Q  255 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    ||||||| |||||||  |||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  50905175 agaaatttttgtgtaaaaacgaatctaacatatcattcttacaaacaacaaattaaaacatgatacgtc 50905107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17294632 - 17294696
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||  ||||||| |||||||||    
T  17294632 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctc 17294696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50052126 - 50052061
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttg 66  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| |||  || |||||||||    
T  50052126 tataagtaagaggacccataaacctattttcttaaagttttgggtaagagtgtggtgtctctcttg 50052061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 66190 - 66123
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctcttg 66  Q
    |||||||||||||||||||||||||||  |||||||||||||||||  ||||||||| ||||| ||||    
T  66190 tataagtaagaggacccataaacctatggccttaaggttttgggtaagagtgtggcgcctctcacttg 66123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 319
Target Start/End: Complemental strand, 23346675 - 23346620
Alignment:
Q  263 ttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgaca 319  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  23346675 ttgtgtaggaacgaacctaac-tatcattcttacaaacaataaattaaaacatgaca 23346620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 346
Target Start/End: Complemental strand, 42180834 - 42180744
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    ||||||||||||| | | |||||| |||| ||||||| ||||||||||||||| ||||||||||||| || || |||| ||||||||||||||    
T  42180834 gagaaattcttgtat-gaaacgaatctaa-atatcattcttacaaacaacaaactaaaacatgacacatcattattttattttaaaataatta 42180744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 44290561 - 44290514
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  44290561 tataagtaagaggacccataaacccattgccttaaggttttgggtaag 44290514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44290928 - 44290882
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaa 47  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  44290928 tataagtaagaggacccataaacccattgccttaaggttttgggtaa 44290882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26662001 - 26661932
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||| ||| |||||||||||| ||| ||||||||||||||||||| |||  || |||||||||||||    
T  26662001 tataagtgagaagacccataaaccgattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 26661932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34364980 - 34365044
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||  ||||||| |||||||||    
T  34364980 tataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctc 34365044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38804458 - 38804389
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||| ||||||||| ||  ||||||||||||||||||| |||  || |||||||||||||    
T  38804458 tataagtaagaggatccataaacccataaccttaaggttttgggtaagagtgtagtgtctctcttgcttg 38804389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14318922 - 14318985
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||  ||||||| ||||||||    
T  14318922 tataagtaagaagacccataaatctattgccttaaggttttgggtaagagtgtggtgtctctct 14318985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3550775 - 3550842
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgct 68  Q
    ||||||||||||||| |||||||| ||| |||||| |||||||||||| |||  || |||||||||||    
T  3550775 tataagtaagaggactcataaacccattgccttaaagttttgggtaagagtgtggtgtctctcttgct 3550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31767264 - 31767217
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||||||||||||||| |||||| | |||||||||||||||||||    
T  31767264 tataagtaagaggacccattaacctaatgccttaaggttttgggtaag 31767217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9955963 - 9956033
Alignment:
Q  1 tataagtaagaggacccat-aaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||   | |||||||||||||    
T  9955963 tataagtaagaggacccattaaaccaattgccttaaggttttgggtaagagtgtgatgtctctcttgcttg 9956033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41142427 - 41142491
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta---agtgtggcgtctctct 62  Q
    ||||||||| |||||||||||||| ||| |||||||||||| ||||   ||||||||||||||||    
T  41142427 tataagtaaaaggacccataaacccattgccttaaggtttttggtaaagagtgtggcgtctctct 41142491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3875434 - 3875370
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag--tgtggcgtctctctc 63  Q
    ||||||||||||||| |||||||| ||| |||||||||||| ||||||  ||||| |||||||||    
T  3875434 tataagtaagaggactcataaacccattgccttaaggttttaggtaagaatgtggagtctctctc 3875370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22077598 - 22077534
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    |||||||||||||||||||||||   |  |||||||||||||||||  |||||||||||||||||    
T  22077598 tataagtaagaggacccataaactcgtagccttaaggttttgggtaagagtgtggcgtctctctc 22077534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 26661625 - 26661561
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    ||||||| |||||||||||||||  ||| |||||||||||||||||  ||||||| |||||||||    
T  26661625 tataagtgagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctctc 26661561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32594819 - 32594750
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||  |||  |||||||||||||||||| |||  || |||||||| ||||    
T  32594819 tataagtaagaggacccataaactcattgtcttaaggttttgggtaagagtgtggtgtctctcttacttg 32594750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37556167 - 37556235
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||| ||||||| ||  ||||||||||||||||||| |||  || |||||||||||||    
T  37556167 tataagtaagaggacc-ataaacccatagccttaaggttttgggtaagagtgtggtgtctctcttgcttg 37556235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41157046 - 41157115
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||  ||| | ||||||||||||||||| |||  || ||||| |||||||    
T  41157046 tataagtaagaggacccataaactcattgctttaaggttttgggtaagagtgtggtgtctctattgcttg 41157115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41157430 - 41157499
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| |||| |||||||| ||||| |||  || ||| |||||||||    
T  41157430 tataagtaagaggacccataaacccattgcctttaggttttgagtaagagtgtggtgtctgtcttgcttg 41157499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5320068 - 5320000
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgctt 69  Q
    ||||||| |||||||||||||||  ||  ||||||||||||||||||| |||  || ||||||||||||    
T  5320068 tataagtgagaggacccataaactcatagccttaaggttttgggtaagagtgtagtgtctctcttgctt 5320000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5528857 - 5528794
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaa--gtgtggcgtctctct 62  Q
    ||||| ||||||||| |||||||  |||| |||||||||||||||||  |||||||||||||||    
T  5528857 tataaataagaggactcataaactcattttcttaaggttttgggtaaatgtgtggcgtctctct 5528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 41759538 - 41759606
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgctt 69  Q
    ||||||||||| || ||||||| | ||| ||||||||||||||||||| |||  || ||||||||||||    
T  41759538 tataagtaagatgatccataaatccattgccttaaggttttgggtaagagtgtggtgtctctcttgctt 41759606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 66575 - 66528
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||| |||||||| |||  |||||||||||||||||||    
T  66575 tataagtaagaggatccataaacatatggccttaaggttttgggtaag 66528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11977335 - 11977382
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||| || |||||||||| | |||||||||||||||||||    
T  11977335 tataagtaagagcactcataaacctaatgccttaaggttttgggtaag 11977382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 32168795 - 32168732
Alignment:
Q  7 taagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||| ||| |||| |||||||||||||| |||  |  |||||||||||||    
T  32168795 taagaggacccataaacccattgccttgaggttttgggtaagagtgtggcgtctctcttgcttg 32168732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 41184528 - 41184489
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttt 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  41184528 tataagtaagaggacccataaacccattgccttaaggttt 41184489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29798254 - 29798320
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgc 67  Q
    ||||||||||||||| |||||||| ||| ||||||||| |||| |||| |||  || ||||||||||    
T  29798254 tataagtaagaggactcataaacccattgccttaaggtcttggataagagtgtggtgtctctcttgc 29798320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 3537698 - 3537633
Alignment:
Q  5 agtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||| ||||||| |||  |||||||||||||||||| |||  |  |||||||||||||    
T  3537698 agtaagaggacctataaacccattggcttaaggttttgggtaagagtgtggcgtctctcttgcttg 3537633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44043875 - 44043810
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttg 66  Q
    ||||||||||| |||||||||||| |||  |||||| ||||||||||| |||  || |||||||||    
T  44043875 tataagtaagatgacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctcttg 44043810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 45839686 - 45839755
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||| ||||||||||  || | |||||||||||||||||||  ||  || |||||||||||||    
T  45839686 tataagtaagaagacccataaatgtaatgccttaaggttttgggtaagattgtggtgtctctcttgcttg 45839755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30630741 - 30630689
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtgg 53  Q
    |||||||||||| ||||||||||  ||| |||||| |||||||||||| ||||    
T  30630741 tataagtaagagaacccataaacacattgccttaaagttttgggtaagagtgg 30630689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 253 - 347
Target Start/End: Complemental strand, 13280100 - 13280006
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13280100 agagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgatacgtcgttgttttcttttaaaataattat 13280006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 253 - 371
Target Start/End: Complemental strand, 31860350 - 31860232
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattatnnnnn 352  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||         
T  31860350 agagaaattcttgtgtaggaacgaacctaacctaccatccttacaaacaacaaattaaaacatgacacatcgttgttttcttttaaaataattataaaaa 31860251  T
Q  353 nntaaattaactagtcctt 371  Q
      |||||||||||||||||    
T  31860250 aataaattaactagtcctt 31860232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 42028578 - 42028671
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42028578 gagaaattcttgtgtaggaacgaacctaacctatcattcttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 42028671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 252 - 347
Target Start/End: Complemental strand, 2059750 - 2059655
Alignment:
Q  252 tagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2059750 tagagaaattattgtgttggaacgaacctaacctatcatccttacaaacaacaaattaaaatatgacacgtcgttgttttcttttaaaataattat 2059655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 16115046 - 16115139
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16115046 gagaaatttttgtgtaagaacgaacctaacctatcatccttacaaacaacaaattaaaatatgacacgtcgttgttttcttttaaaataattat 16115139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 253 - 347
Target Start/End: Complemental strand, 7317900 - 7317806
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| | ||| ||||||||||||||||||||    
T  7317900 agagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaataaattaaaacatgacacattgtttttttcttttaaaataattat 7317806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 36059352 - 36059278
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttg 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36059352 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttg 36059278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 249 - 331
Target Start/End: Complemental strand, 42028847 - 42028765
Alignment:
Q  249 ttatagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  42028847 ttattgagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgatacgtcgttgtttt 42028765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 31470587 - 31470678
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    |||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  31470587 gagaaattcttgtgtaggaacgaacctaac-tatcatttttacaaacaacaaattaaaacatgacacgtcattgttttattttaaaataatta 31470678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 15332927 - 15332844
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttctttt 336  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  15332927 agagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaataaattaaaacatgacacgtcattgttttatttt 15332844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 248 - 323
Target Start/End: Original strand, 31860073 - 31860148
Alignment:
Q  248 gttatagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  31860073 gttatcgagaaattcttgtgtaggaacgaacctaacctatcatccttataaacaacaaattaaaacatgacacgtc 31860148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 254 - 345
Target Start/End: Complemental strand, 38086231 - 38086140
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    |||||||| ||||||||| || ||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||    
T  38086231 gagaaatttttgtgtagggacaaacctaacatatcattcttacaaacaacaaattaaaatatgatacgtcattgttttattttaaaataatt 38086140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 7317634 - 7317712
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    ||||||| | ||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  7317634 agagaaacttttgtgtaggaacgaacctaacctatcatccttactaacaacaaactaaaacatgacacgtcgttgtttt 7317712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 38085967 - 38086038
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgtt 326  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||    
T  38085967 gagaaattcttgtgtaggaacgaaactaac-tatcattcttacaaacaacaaattaaaacatgacacgtcgtt 38086038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 2059490 - 2059567
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| || |||||||    
T  2059490 gagaaattcttgggtaggaacgaacctaacctatcatccttacaaacaacaaactaaaatatgacacttcattgtttt 2059567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 3671822 - 3671886
Alignment:
Q  255 agaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 320  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  3671822 agaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacac 3671886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 315
Target Start/End: Original strand, 13279840 - 13279901
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacat 315  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  13279840 gagaaattcttgtgtaggaacgaacctaatctatcatccttacaaacaacaaattaaaacat 13279901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 16115308 - 16115231
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||| || |||||||    
T  16115308 gagaaatttttgtgtaggaacgaacctaacctatcattcttacaaacaacaaactaaaatatgacacttcattgtttt 16115231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 345
Target Start/End: Complemental strand, 3672087 - 3671996
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    ||||||||||| || ||||||||| |||| |||||||  ||||||| |||||||||||| || ||||||| ||||||| |||||||||||||    
T  3672087 gagaaattcttatggaggaacgaatctaatatatcatttttacaaataacaaattaaaatataacacgtcattgttttattttaaaataatt 3671996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5542728 - 5542659
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||| |||  || |||||||||||||    
T  5542728 tataagtaagaggacccataaacctattgccttaaggtttttggtaagagtgtggtgtctctcttgcttg 5542659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36178708 - 36178639
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| |||  || |||||||||||||    
T  36178708 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 36178639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37106243 - 37106312
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||  || | |||||||||||    
T  37106243 tataagtaagaggacccataaacccatttccttaaggttttgggtaagagtgtggtgtttctcttgcttg 37106312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14745770 - 14745707
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||    
T  14745770 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctct 14745707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15880318 - 15880381
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||    
T  15880318 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctct 15880381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 311
Target Start/End: Original strand, 15330444 - 15330505
Alignment:
Q  249 ttatagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaa 311  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  15330444 ttatggagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaataaattaaa 15330505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 31470841 - 31470776
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacac 320  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||  |||||||    
T  31470841 gagaaatttttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaataatgacac 31470776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28254340 - 28254273
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctcttg 66  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||  ||||||| ||||||||||||    
T  28254340 tataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctctcttg 28254273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33731703 - 33731771
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgctt 69  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||| ||   || ||||||||||||    
T  33731703 tataagtaagaggatccataaacctattgccttaaggttttgggtaagagtatggtgtctctcttgctt 33731771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36005983 - 36005920
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggt--aagtgtggcgtctctct 62  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||  |||||||||||||||||    
T  36005983 tataagtaagaggacccataaactcattgccttaaggttttgggtaaaagtgtggcgtctctct 36005920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 38796723 - 38796676
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||    
T  38796723 tataagtaagaggacccataaacctaatgccttaaggttttgggtaag 38796676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 14745395 - 14745334
Alignment:
Q  3 taagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||| ||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||    
T  14745395 taagtatgaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctct 14745334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5543101 - 5543032
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||||||| |||  || ||||| |||||||    
T  5543101 tataagtaagaggatccataaacctattgccttaagattttgggtaagagtgtggtgtctctattgcttg 5543032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 6421793 - 6421849
Alignment:
Q  8 aagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||||||||||||||||| |||||||||||||||||  ||||||| ||||||||    
T  6421793 aagaggacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctct 6421849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15511598 - 15511529
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| |||  |||||| ||||||||||| |||  || |||||||||||||    
T  15511598 tataagtaagaggacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctcttgcttg 15511529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41283578 - 41283515
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||||||||||||||  ||| |||||||||||| ||||  ||||||||||||||||    
T  41283578 tataagtaagaggacccataaactcattgccttaaggttttaggtaagagtgtggcgtctctct 41283515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42514704 - 42514767
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||||||||||||||| ||  ||||||| |||||||||  ||||||||||||||||    
T  42514704 tataagtaagaggacccataaacccatcgccttaagattttgggtaagagtgtggcgtctctct 42514767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31259719 - 31259672
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||    
T  31259719 tataagtaagatgacccataaacctatcaccttaaggttttgggtaag 31259672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6421440 - 6421509
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||| |||||||  ||| |||| |||||||||||||| |||  || |||||||||||||    
T  6421440 tataagtaagaggactcataaactcattgccttgaggttttgggtaagagtgtggtgtctctcttgcttg 6421509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6422165 - 6422234
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||| |||||||||||||||||| ||  |||||||||||| |||||| |||  || |||||||||||||    
T  6422165 tataattaagaggacccataaacccatagccttaaggttttaggtaagagtgtggtgtctctcttgcttg 6422234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6713031 - 6713100
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaagg-ttttgggtaagtgtggcgtctctctcttgctt 69  Q
    |||||||||||||||||||||||||||| | |||||| ||||||||||| |||   | ||||||||||||    
T  6713031 tataagtaagaggacccataaacctattgctttaaggtttttgggtaagagtgtgatgtctctcttgctt 6713100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37105979 - 37106048
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||| ||||||||||||  ||| ||||||| ||||||||||| |||  || |||||||||||||    
T  37105979 tataagtaaggggacccataaactcattgccttaagattttgggtaagagtgtggtgtctctcttgcttg 37106048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40733572 - 40733636
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    ||||||||||||||||||||||||||   |||||| ||||||||||  ||||||| |||||||||    
T  40733572 tataagtaagaggacccataaacctacaaccttaaagttttgggtaagagtgtggtgtctctctc 40733636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40679732 - 40679669
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||| ||||||||||| ||  ||||||| |||||||||  ||||||||||||||||    
T  40679732 tataagtaagagaacccataaacccatcgccttaagattttgggtaagagtgtggcgtctctct 40679669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 962653 - 962700
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||| |||||||||||||||| |||  ||||||||||||||||||    
T  962653 tataagtgagaggacccataaacccattgtcttaaggttttgggtaag 962700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37632700 - 37632653
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||||| ||  | |||||||||||||||||    
T  37632700 tataagtaagaggacccataaacccataactttaaggttttgggtaag 37632653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 30312856 - 30312890
Alignment:
Q  13 gacccataaacctatttccttaaggttttgggtaa 47  Q
    ||||||||||| |||||||||||||||||||||||    
T  30312856 gacccataaacttatttccttaaggttttgggtaa 30312890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31385792 - 31385853
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttggg--taagtgtggcgtctct 60  Q
    ||||||| | |||||||||||||| ||| |||||||||||||||  ||||||||| ||||||    
T  31385792 tataagtgaaaggacccataaacccattgccttaaggttttgggaataagtgtggtgtctct 31385853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 283
Target Start/End: Original strand, 36059247 - 36059277
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaac 283  Q
    |||||||||||||||||||||||||||||||    
T  36059247 agagaaattcttgtgtaggaacgaacctaac 36059277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 6421688 - 6421744
Alignment:
Q  8 aagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||||||||||||  || |||||||||||||  ||||||| ||||||||    
T  6421688 aagaggacccataaacctattgactaaaggttttgggtaagagtgtggtgtctctct 6421744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25390371 - 25390326
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta 46  Q
    ||||| ||||| ||||||||||||||||  ||||||||||||||||    
T  25390371 tataactaagaagacccataaacctattgtcttaaggttttgggta 25390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30313232 - 30313296
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    ||||||| |||||||||| ||||  ||| ||||||| |||||||||  |||||||||||||||||    
T  30313232 tataagtgagaggacccaaaaactcattgccttaagattttgggtaagagtgtggcgtctctctc 30313296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 31468847 - 31468806
Alignment:
Q  7 taagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||  ||| |||||||||||||||||||    
T  31468847 taagaggacccataaactcattgccttaaggttttgggtaag 31468806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36178274 - 36178205
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||| | ||||||||||| ||| ||||||| ||||||||||| |||  ||  ||||||||||||    
T  36178274 tataagtaagggaacccataaacccattgccttaagattttgggtaagagtgtggtgcctctcttgcttg 36178205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 30323522 - 30323581
Alignment:
Q  4 aagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctc 61  Q
    |||| |||||||| ||||||  ||| |||||||||||||||||  |||||||||||||||    
T  30323522 aagtgagaggacctataaactcattgccttaaggttttgggtaagagtgtggcgtctctc 30323581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 35580534 - 35580477
Alignment:
Q  10 gaggacccataaacctatttccttaaggttttgggta----agtgtggcgtctctctc 63  Q
    ||||||||||||||  ||| |||||||||||||||||    |||||||||||||||||    
T  35580534 gaggacccataaactcattgccttaaggttttgggtaagagagtgtggcgtctctctc 35580477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35580826 - 35580764
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||| |||||||| ||||||| ||| |||||||||||||||||  |||| |||||||||||    
T  35580826 tataagtgagaggacc-ataaacccattgccttaaggttttgggtaagagtgcggcgtctctct 35580764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 5e-41; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 37994972 - 37994879
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37994972 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaataaattaaaacatgacacgtcgttgttttcttttaaaataattat 37994879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 252 - 345
Target Start/End: Original strand, 41539768 - 41539861
Alignment:
Q  252 tagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  41539768 tagagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaatatgacacgtcgttgttttattttaaaataatt 41539861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 254 - 346
Target Start/End: Complemental strand, 2814508 - 2814416
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  2814508 gagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacatgacacgtcattgttttttttaaaaataatta 2814416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 397278 - 397177
Alignment:
Q  244 ataagttatagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataa 343  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  397278 ataagtta-agagaaattcttgtgtagaaacgaacctaacatatcattcttataaacaacaaattaaaacatgacacgtcattgttttattttaaaataa 397180  T
Q  344 tta 346  Q
    |||    
T  397179 tta 397177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 37994708 - 37994785
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  37994708 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaataaattaaaacatgatacgtcgttgtttt 37994785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 44036813 - 44036891
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  44036813 agagaaattcatgtgtagggacgaacctaacctatcatccttacaaacaacaaattcaaacatgacacgtcgttgtttt 44036891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 326
Target Start/End: Complemental strand, 41540035 - 41539963
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgtt 326  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  41540035 agagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtcgtt 41539963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 334
Target Start/End: Complemental strand, 14193588 - 14193509
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttctt 334  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| || |||||||    
T  14193588 gagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacatgacacgtcatttttttctt 14193509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 2814242 - 2814319
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||| ||||    
T  2814242 agagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaatcatgacacgtcgttttttt 2814319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 345
Target Start/End: Original strand, 14193323 - 14193414
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatt 345  Q
    ||||||||| |||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||| || ||||||| |||||||||||||    
T  14193323 agagaaatttttgt-taggaacgaacctaacatattatttttacaaacaacaaattaaaacatgacacatcattgttttattttaaaataatt 14193414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3670115 - 3670184
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||  || |||||||||||||    
T  3670115 tataagtatgaggacccataaacctatttccttaaggttttgggtaagagtgtggtgtctctcttgcttg 3670184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 25101746 - 25101823
Alignment:
Q  270 ggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||||||||||||| |||||| ||| ||||||||||| ||||| ||||||| | ||||||||||||||||||||||||    
T  25101746 ggaacgaacctaacctatcattcttgcaaacaacaaaataaaatatgacacattgttgttttcttttaaaataattat 25101823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 397007 - 397083
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||| ||||||||||||||| |||||| ||||||||||| |||||||||||| |||||| ||| ||||    
T  397007 gagaaattcttgtgcaggaacgaacctaac-tatcattcttacaaacaataaattaaaacataacacgttgttttttt 397083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30441140 - 30441209
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||| |||  || |||||||||||||    
T  30441140 tataagtaagagggcccataaacccattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 30441209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 147506 - 147569
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||| |||||||||||||||||||||| |||||| ||||||||||  ||||||||||||||||    
T  147506 tataaataagaggacccataaacctattgccttaaagttttgggtaagagtgtggcgtctctct 147569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8918867 - 8918820
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  8918867 tataagtaagaggacccataaacctattgacttaaggttttgggtaag 8918820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9507837 - 9507898
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctct 60  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||  ||||||||||||||    
T  9507837 tataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgtctct 9507898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 3038393 - 3038324
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||| |||  |  |||||||||||||    
T  3038393 tataagtaaaaggacccataaacccattgccttaaggttttgggtaagagtgtggcatctctcttgcttg 3038324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3669742 - 3669811
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||| |||||||  ||| ||||||||||||||||||| |||  || |||||||||||||    
T  3669742 tataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 3669811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Complemental strand, 44037022 - 44036985
Alignment:
Q  310 aaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44037022 aaacatgacacgtcgttgttttcttttaaaataattat 44036985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 45123061 - 45123106
Alignment:
Q  3 taagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  45123061 taagtaagatgacccataaacctattttcttaaggttttgggtaag 45123106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9608800 - 9608863
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||||||| |||||||||||| ||  |||||||||||||||||  ||||||||||||||||    
T  9608800 tataagtaagatgacccataaacccatcaccttaaggttttgggtatgagtgtggcgtctctct 9608863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45122679 - 45122742
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||||||||||||||  |||  ||||||||||||||||  ||||||||||||||||    
T  45122679 tataagtaagaggacccataaactcattgtcttaaggttttgggtatgagtgtggcgtctctct 45122742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 5915928 - 5915991
Alignment:
Q  7 taagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||  ||| ||||||||||||||||||| |||  || |||||||||||||    
T  5915928 taagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 5915991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9483290 - 9483243
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||||| |||  ||||||||||||||||||    
T  9483290 tataagtaagaggacccataaacccattgtcttaaggttttgggtaag 9483243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33113470 - 33113403
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgct 68  Q
    |||||||||||||||||||||||  ||| ||||||| ||||||||||| |||  || |||||||||||    
T  33113470 tataagtaagaggacccataaactcattgccttaagattttgggtaagagtgtggtgtctctcttgct 33113403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43274882 - 43274835
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||    
T  43274882 tataagtaagaggacccataaacctattgtcttaaggttttgagtaag 43274835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20870676 - 20870607
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| | | ||||||| |||||| |||| |||  || |||||||||||||    
T  20870676 tataagtaagaggacccataaacccactgccttaagattttggataagagtgtggtgtctctcttgcttg 20870607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30359326 - 30359395
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||| ||||||||||||||||| ||  ||||||||||||||||||| |||  || |||||||| ||||    
T  30359326 tataagcaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctttcttg 30359395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34834931 - 34835000
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||| ||| |||||||  ||| ||||||||||||||||||| |||  || |||||||||||||    
T  34834931 tataagtaagatgactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgcttg 34835000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34835264 - 34835333
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||  ||| |||||| |||||||||||| |||  || || ||||||||||    
T  34835264 tataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttg 34835333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34835530 - 34835599
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||  ||| |||||| |||||||||||| |||  || || ||||||||||    
T  34835530 tataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttg 34835599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34835796 - 34835865
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||  ||| |||||| |||||||||||| |||  || || ||||||||||    
T  34835796 tataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactcttgcttg 34835865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 40579609 - 40579540
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||||||||||| |||| | |||||||||| |||||| |||  || ||||| |||||||    
T  40579609 tataagtaagaggacccataaacttattgctttaaggttttaggtaagagtgtggtgtctctattgcttg 40579540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45122160 - 45122091
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||| ||||||||||  |||| |||||||||||||||||| |||  || |||||||| ||||    
T  45122160 tataagtaagagaacccataaactcattttcttaaggttttgggtaagagtgtggtgtctctcttacttg 45122091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 147888 - 147944
Alignment:
Q  14 acccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||| ||||||||||||||||||| |||  || |||||||| ||||    
T  147888 acccataaacctattgccttaaggttttgggtaagagtgtggtgtctctcttacttg 147944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40518126 - 40518189
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||  ||||||||||||| | | |||||||||||||||||  ||||||||||||||||    
T  40518126 tataagtaaatggacccataaacccaatgccttaaggttttgggtaagagtgtggcgtctctct 40518189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 70377 - 70330
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||||| | | |||||||||||| ||||||    
T  70377 tataagtaagaggacccataaacccactgccttaaggttttaggtaag 70330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9309034 - 9309077
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttggg 44  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||    
T  9309034 tataagtaagaggacccataaacccattgcctaaaggttttggg 9309077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 32640630 - 32640567
Alignment:
Q  6 gtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgctt 69  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||| |||  |  ||||||||||||    
T  32640630 gtaagaggaccgataaacccattgccttaaggttttgggtaagagtgttgcgtctctcttgctt 32640567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 40588054 - 40587991
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatga 317  Q
    |||||||||| |||||||||||||  ||| |||||||  ||| ||| |||||||||||||||||    
T  40588054 gagaaattctggtgtaggaacgaatttaatatatcatttttataaataacaaattaaaacatga 40587991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1514018 - 1513972
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaa 47  Q
    ||||||||||||||||| |||||| ||  ||||||||||||||||||    
T  1514018 tataagtaagaggacccttaaacccataaccttaaggttttgggtaa 1513972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 45122013 - 45121952
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctct 60  Q
    ||||||||||||||| |||||||  ||| ||||||| |||||||||  ||||||||||||||    
T  45122013 tataagtaagaggactcataaactcattgccttaagattttgggtaacagtgtggcgtctct 45121952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9482707 - 9482638
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| ||| ||| |||||  |||| |||  || |||||||||||||    
T  9482707 tataagtaagaggacccataaacccattgcctaaagattttgtataagagtgtggtatctctcttgcttg 9482638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5420706 - 5420746
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggtttt 41  Q
    ||||||||||||||| |||||||| ||| ||||||||||||    
T  5420706 tataagtaagaggactcataaacccattgccttaaggtttt 5420746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 6651555 - 6651636
Alignment:
Q  7 taagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttgcttgtgtgattgttctaacctc 92  Q
    |||||| |||||||||   ||| ||||||||||||||||||| |||  || |||||    |||||||||| |||||||||||||||    
T  6651555 taagagaacccataaattcattgccttaaggttttgggtaagagtgtggtgtctct----cttgcttgtgcgattgttctaacctc 6651636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8794166 - 8794210
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggt 45  Q
    ||||||||||||||| |||||||||| |  |||||||||||||||    
T  8794166 tataagtaagaggactcataaacctaatatcttaaggttttgggt 8794210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9609140 - 9609203
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||||||| |||||||||||| ||  |||||| ||||| ||||  ||||||||||||||||    
T  9609140 tataagtaagatgacccataaacccatcgccttaatgttttcggtaagagtgtggcgtctctct 9609203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30359664 - 30359727
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    ||||||||||||||| |||||||| ||  ||||||| |||||||||  ||||||| ||||||||    
T  30359664 tataagtaagaggactcataaacccataaccttaagattttgggtaagagtgtggtgtctctct 30359727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 7298635 - 7298727
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  7298635 gagaaattcttgtgtaggaacgaacctaacatatcatttttacaaacaacaaattaaaacatgacacgtcattgttttattttaaaataatta 7298727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 254 - 346
Target Start/End: Complemental strand, 40521280 - 40521188
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  40521280 gagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacatgacacatcattgttttattttaaaataatta 40521188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 253 - 347
Target Start/End: Complemental strand, 19805679 - 19805585
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  19805679 agagaaattcttgtgtaggaacgaacttaacctatcatccttataaataacaaattaaaacatgacacgtcgttgctttcttttaaaataattat 19805585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 19804797 - 19804874
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||| ||||||||||    
T  19804797 gagaaattcttgtgtaggaacgaacctaacctattatccttacaaacaacaaattgaaacacgacacatcgttgtttt 19804874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 40521015 - 40521084
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  40521015 agagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaatatgacacgtc 40521084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 7298901 - 7298833
Alignment:
Q  253 agagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 322  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  7298901 agagaaattcttgtgtaggaacgaacctaac-tatcattcttacaaacaacaaattaaaacataacacgt 7298833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 46567960 - 46568025
Alignment:
Q  257 aaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  46567960 aaattcttgtgtaggaacgaacttaac-tatcattcttacaaacaacaaattaaaacatgacacgtc 46568025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 16979681 - 16979613
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||    
T  16979681 gagaaattcttgtgtaggaacgaatctaac-tatcattcttacaaataacaaattaaaacatgacacgtc 16979613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 28949069 - 28949001
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtc 323  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  28949069 gagaaatttttgtgtaggaacgaacctaac-tatcattcttacaaacaataaattaaaacatgacacgtc 28949001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23480 - 23414
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgc 67  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||  || ||||||||||    
T  23480 tataagtaagaggacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctcttgc 23414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 346
Target Start/End: Complemental strand, 46568196 - 46568130
Alignment:
Q  280 taacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataatta 346  Q
    ||||||||||| ||||||||||||||||||||||||||||| || ||||||| ||| ||||||||||    
T  46568196 taacatatcattcttacaaacaacaaattaaaacatgacacatcattgttttatttaaaaataatta 46568130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1085719 - 1085656
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||    
T  1085719 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctct 1085656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 118403 - 118333
Alignment:
Q  2 ataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||| ||||||||| ||| || ||||||||||||||  |||||||||||| |||||||||||    
T  118403 ataagtaagaggatccataaacccattaccgtaaggttttgggtaagagtgtggcgtctatctcttgcttg 118333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7517635 - 7517682
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  7517635 tataagtaagaggacccataaacccattgccttaaggttttgggtaag 7517682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22566765 - 22566718
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  22566765 tataagtaagaggacccataaacccattgccttaaggttttgggtaag 22566718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37533113 - 37533051
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggt-aagtgtggcgtctctct 62  Q
    |||||||||||||||||||||||  ||| |||||||||||||||| |||||||| ||||||||    
T  37533113 tataagtaagaggacccataaactcattgccttaaggttttgggtaaagtgtggtgtctctct 37533051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 11845246 - 11845315
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||| | ||| |||||||||||||| |||| |||  || |||||||||||||    
T  11845246 tataagtaagaggacccataaatccattgccttaaggttttggataagagtgtggtgtctctcttgcttg 11845315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16569251 - 16569316
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttg 66  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||| |||  || |||||||||    
T  16569251 tataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgcggtgtctctcttg 16569316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16596411 - 16596346
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttg 66  Q
    |||||||||||||||||||||||| ||| |||||||||||| |||||| |||  || |||||||||    
T  16596411 tataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgcggtgtctctcttg 16596346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22567142 - 22567073
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||  ||| |||||||||||| |||||| |||  || |||||||||||||    
T  22567142 tataagtaagaggacccataaactcattgccttaaggtttttggtaagagtgtggtgtctctcttgcttg 22567073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30244325 - 30244389
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||  ||||||| |||||||||    
T  30244325 tataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgtctctctc 30244389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37533467 - 37533398
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||||| |||  || ||||| |||||||    
T  37533467 tataagtaagaggacccataaatccattgccttaaggttttgggtaagagtgtggtgtctcttttgcttg 37533398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 45433296 - 45433365
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||| || |||||||||||| ||||||| ||||||||||| |||  || |||||||||||||    
T  45433296 tataagtaagagaactcataaacctattgccttaagattttgggtaagagtgtggtgtctctcttgcttg 45433365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6054615 - 6054662
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||    
T  6054615 tataagtaagaggacccataaacacattgccttaaggttttgggtaag 6054662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 29157620 - 29157687
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgct 68  Q
    ||||||||||| |||||||||| | ||| ||||||||||||||||||| |||  || |||||||||||    
T  29157620 tataagtaagacgacccataaatccattgccttaaggttttgggtaagagtgtggtgtctctcttgct 29157687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36534887 - 36534825
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctc 61  Q
    ||||||||||||||||||||||||||    ||||||||||||||||  |||||||||||||||    
T  36534887 tataagtaagaggacccataaacctaaagtcttaaggttttgggtaagagtgtggcgtctctc 36534825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45434691 - 45434738
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||||||||||||||||||| || | |||||||||||||||||||    
T  45434691 tataagtaagaggacccataaacttactgccttaaggttttgggtaag 45434738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36939836 - 36939790
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaa 47  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||||    
T  36939836 tataagtaagaggacccataaatccattgccttaaggttttgggtaa 36939790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7554080 - 7554144
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    |||||||||||||| ||||||||| ||  |||||||||||||||||  ||||||| |||||||||    
T  7554080 tataagtaagaggatccataaacccatagccttaaggttttgggtaagagtgtggtgtctctctc 7554144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19122786 - 19122855
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||||||| |||||| | ||| ||||||||||||||||||| |||  || ||| |||||||||    
T  19122786 tataagtaagaggactcataaatccattgccttaaggttttgggtaagagtgtggtgtctatcttgcttg 19122855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30245132 - 30245197
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttg 66  Q
    ||||||||||| |||||||||||  ||| ||||||||||||||||||| |||  || |||||||||    
T  30245132 tataagtaagacgacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttg 30245197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30253547 - 30253612
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttg 66  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||| |||  || |||||||||    
T  30253547 tataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttg 30253612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 40094877 - 40094808
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||   |||||||||||||||||| |||  |  |||||||||||||    
T  40094877 tataagtaagaggacccataaacccatcgtcttaaggttttgggtaagagtgtggcgtctctcttgcttg 40094808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 45754770 - 45754839
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    ||||||||||| ||| |||||||| ||  ||||||||||||||||||| |||  || |||||||||||||    
T  45754770 tataagtaagatgactcataaacccatagccttaaggttttgggtaagagtgtggtgtctctcttgcttg 45754839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 47129150 - 47129214
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    |||||||||||||||||||||||| ||  | |||||||||||||||  ||||||| |||||||||    
T  47129150 tataagtaagaggacccataaacccatcgctttaaggttttgggtaggagtgtggtgtctctctc 47129214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24177490 - 24177553
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||| ||||||||||||| ||| |||||| ||||| ||||  ||||||||||||||||    
T  24177490 tataagtaagcggacccataaacccattgccttaaagtttttggtaagagtgtggcgtctctct 24177553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 30032622 - 30032669
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    |||||||||||| | ||||||||||||  |||||||||||||||||||    
T  30032622 tataagtaagagtatccataaacctatagccttaaggttttgggtaag 30032669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 1085350 - 1085304
Alignment:
Q  2 ataagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||||||| ||||||||||  ||| |||||||||||||||||||    
T  1085350 ataagtaagagaacccataaactcattgccttaaggttttgggtaag 1085304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40230394 - 40230348
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaa 47  Q
    |||||||||||||||||||||||| ||   |||||||||||||||||    
T  40230394 tataagtaagaggacccataaacccatagtcttaaggttttgggtaa 40230348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 14681567 - 14681612
Alignment:
Q  3 taagtaagaggacccataaacctatttccttaaggttttgggtaag 48  Q
    ||||||||||| |||||||||| |||  ||||||||||||||||||    
T  14681567 taagtaagagggcccataaacccattgtcttaaggttttgggtaag 14681612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28300357 - 28300293
Alignment:
Q  1 tataagtaagaggaccc-ataaacctatttccttaaggttttgggta--agtgtggcgtctctct 62  Q
    |||||||||||| |||| ||||||| ||| ||||||| |||||||||  ||||||||||||||||    
T  28300357 tataagtaagagaaccccataaacccattgccttaagattttgggtaagagtgtggcgtctctct 28300293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34218137 - 34218073
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctc 63  Q
    ||||||| ||||||| |||||||| |||  ||||||||||||||||  ||||||| |||||||||    
T  34218137 tataagtgagaggactcataaacccattgtcttaaggttttgggtaagagtgtggtgtctctctc 34218073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 258 - 347
Target Start/End: Original strand, 11630 - 11719
Alignment:
Q  258 aattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  11630 aattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaatatgacacatcattgttttcttttaaaataattat 11719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 11891 - 11814
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11891 gagaaattcttgtgtaggaacgaacctaacctatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 11814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 15844 - 15915
Alignment:
Q  251 atagagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgt 322  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15844 atagagaaattcttgtgtaggaacgaacctaacatatcattcttacaaacaacaaattaaaacatgacacgt 15915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 285
Target Start/End: Complemental strand, 16074 - 16045
Alignment:
Q  256 gaaattcttgtgtaggaacgaacctaacat 285  Q
    ||||||||||||||||||||||||||||||    
T  16074 gaaattcttgtgtaggaacgaacctaacat 16045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 37446 - 37523
Alignment:
Q  254 gagaaattcttgtgtaggaacgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 331  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||    
T  37446 gagaaattcttgtgtaggaacgaacctagcctaccatccttacaaacaacaaattaaaacatgacacgtcgttgtttt 37523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 273 - 347
Target Start/End: Complemental strand, 37691 - 37617
Alignment:
Q  273 acgaacctaacatatcatccttacaaacaacaaattaaaacatgacacgtcgttgttttcttttaaaataattat 347  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  37691 acgaacctaacctatcatccttacaaacaacaaattaaaacatgctacgtcgttgttttcttttaaaataattat 37617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 617 - 548
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttgcttg 70  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| |||  || ||| |||||||||    
T  617 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctttcttgcttg 548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1794 - 1729
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggta--agtgtggcgtctctctct 64  Q
    ||||||| |||||||||||||||| ||| |||||||||||| ||||  ||||||| ||||||||||    
T  1794 tataagtgagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctctct 1729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5412 - 5477
Alignment:
Q  1 tataagtaagaggacccataaacctatttccttaaggttttgggtaagtgtggcgtctctctcttg 66  Q
    |||||||||||||||||||||||| ||| ||||||| |||||| |||| |||  || |||||||||    
T  5412 tataagtaagaggacccataaacccattgccttaagattttggataagagtgtggtgtctctcttg 5477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1024 times since January 2019
Visitors: 3662