View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0526_low_46 (Length: 344)
Name: NF0526_low_46
Description: NF0526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0526_low_46 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 30 - 315
Target Start/End: Original strand, 6881538 - 6881824
Alignment:
| Q |
30 |
aattgcacatcagaattgaacaagtttactatcaactttaaggcaaccatagtctatatg-ctatcattgatttggatactgaatacatattaagatttg |
128 |
Q |
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| T |
6881538 |
aattgcacatcagaattgaacaagtttactatcaactttaaggcaaccatagtctatatgtctatcattgatttggatactgaatacatattaagatttg |
6881637 |
T |
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| Q |
129 |
ttgtcaaatttagccaatacatttaagccaaccacataatttcttctcaaactcaatctaattataagatcatgacttacattaatgcattgcctagcac |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
6881638 |
ttgtcaaatttagccaatacatttaagccaaccacataatttcttctcaaactcaatctaattataagatcatggcttacattaatgcattgcctagcac |
6881737 |
T |
|
| Q |
229 |
aatggcaaggctataagaaatgtatcttgcattttctggagaaatcctatcttgcattaaaatgagccagttatccaaagcttgcac |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6881738 |
aatggcaaggctataagaaatgtatcttgcattttctggagaaatcctatcttgcattaaaatgagccagttatccaaagcttgcac |
6881824 |
T |
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