View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0526_low_57 (Length: 284)
Name: NF0526_low_57
Description: NF0526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0526_low_57 |
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Alignment Details
Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 36018154 - 36017907
Alignment:
| Q |
9 |
caataatatttaaaccccttaaccacctccacttctttctcagcttgtttccttctccaaaagagaataacacaagcttcatttcaataacacacacttt |
108 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36018154 |
caataatatttaaaccccttaaccacctccacttctttctcagcttgtttccttctccaaaagagaataacacaagcttcatttcaataacacacacttt |
36018055 |
T |
|
| Q |
109 |
ttccctttctattttcaattgctttcaacacccccatttcaataatgaatactctatctccacctccctcttctaacaccctcaatttcaaccacataac |
208 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36018054 |
ttccctttctatttttaattgctttcaacacccccatttcaataatgaatactctatctccacctccctcttctaacaccctcaatttcaaccacataac |
36017955 |
T |
|
| Q |
209 |
aataacacggccgtggaaatttccaaaccggcttggtccgaaccgtgt |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36017954 |
aataacacggccgtggaaatttccaaaccggcttggtccgaaccgtgt |
36017907 |
T |
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