View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0526_low_60 (Length: 278)
Name: NF0526_low_60
Description: NF0526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0526_low_60 |
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Alignment Details
Target: chr8 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 57 - 238
Target Start/End: Complemental strand, 32738358 - 32738179
Alignment:
| Q |
57 |
aaacttcacttcataattgatttcagggcattaattattttgctatgtattcattcaaacctttgaattttgaaacatcatgtcaatctgaagcgacttt |
156 |
Q |
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| T |
32738358 |
aaacttcacttcataattgatt-cagggcattaattattttgctatgtattcattcaaacctttgaattttgaaacatcatatcaatctgaagcgacttt |
32738260 |
T |
|
| Q |
157 |
tgatactttgacacacgccaggacttgaaaaagagcaccactttccataattatgtgtctaatttctcaggtgacatatttc |
238 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
32738259 |
tgatac-ttgacacacgccaggacttgaaaaagagcaccacttttgataattatgtgtctaatttctcaggtgacatatttc |
32738179 |
T |
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