View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0526_low_62 (Length: 275)
Name: NF0526_low_62
Description: NF0526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0526_low_62 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 30 - 266
Target Start/End: Original strand, 35247653 - 35247884
Alignment:
| Q |
30 |
gattattctgtaatttaattagcataaatcttgttaatttaaaaatatgatatgatttgatttgctttgatgtgtgagttaagaaagagagttggagatg |
129 |
Q |
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| T |
35247653 |
gattattctgtaatttaattagtataaatcttgttaatttaaaaatatgatatgatttgatttg-----atgtgtgagttaagaaagagagttggagatg |
35247747 |
T |
|
| Q |
130 |
cggaacagttgcattgtgaagcggaagatgatagaaagaagaagaagaagctcaccttgacatctgtaacaaagctggagaaccaaaacaaaacaattgt |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
35247748 |
cggaacagttgcattgtgaagcggaagatgatagaaagaagaagaagaagcttaccttgacatctgtaacaaagctggagaaccaaaacaaaacaaatgt |
35247847 |
T |
|
| Q |
230 |
gttgtcattgtcctctcattttttactatatattatt |
266 |
Q |
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||||||| ||||||||||||||||||||||||||||| |
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| T |
35247848 |
gttgtcaatgtcctctcattttttactatatattatt |
35247884 |
T |
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