View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0526_low_7 (Length: 584)
Name: NF0526_low_7
Description: NF0526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0526_low_7 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 496; Significance: 0; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 496; E-Value: 0
Query Start/End: Original strand, 18 - 553
Target Start/End: Original strand, 38061345 - 38061880
Alignment:
Q |
18 |
tgaatccttggcaccatcttcacgaaacatacgccacattctttctaatccaatttcagaaatgggaattctcacaaagtcagactttactttgaaaata |
117 |
Q |
|
|
|||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
T |
38061345 |
tgaatctttggcaccatcttcatgaaacatacgccacattctttctaatccaatttcagaaatgggaattctcacaaaatcagactttactttgaaaata |
38061444 |
T |
 |
Q |
118 |
tcctttgcagcttgtatgctgttgagcaacatttcaggtgattcgcctttcggaaatccataaaggtaaagaaccgattcaatccaactcatctcaatac |
217 |
Q |
|
|
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
38061445 |
tcctttgcagcttgtgttctgttgagcaacatttcaggtgattcgcctttcggaaatccataaaggtaaagaaccgattcaatccaactcatctcaatac |
38061544 |
T |
 |
Q |
218 |
aatcttctctaaccaaaccaagtgctggaaacttttctaccatcaagggaatgagtttatctacacttccaagaaacaaggcttgaaataaagcttgtac |
317 |
Q |
|
|
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
38061545 |
aatcttctctaaccaaaccaagttctggaaacttttctttcatcaagggaatgagtttatctacacttccaagaaacaaggcttgaaataaagcttgtac |
38061644 |
T |
 |
Q |
318 |
tgttgaatttgactttccttttttacttaaatttaccctttgcaagataacataaatggctatgttttcatcaattgtacttgtcacaaactgccacttg |
417 |
Q |
|
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
38061645 |
tgttgaatttgacttaccttttttacttaaatttaccctttgcaagataacataaatggctatgttttcatcaattgtacttgtcacaaactgccacttg |
38061744 |
T |
 |
Q |
418 |
tgaacaagctttgttgcattttgatccaatgtttttggcacattgaacactgtcacacttgatggaacttgaacaagtttaaccttccatgaaattatga |
517 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
38061745 |
tgaacaagctttgttgcattttgatccaatgtttttggcacattgaacactgacacacttgatggaacttgaacaagtttaaccttccatgaaattatga |
38061844 |
T |
 |
Q |
518 |
ctccaaaacttgctcctccacctcctctaatagccc |
553 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| |
|
|
T |
38061845 |
ctccaaaacttgctcctccacctcctctaatagccc |
38061880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 25 - 553
Target Start/End: Complemental strand, 38059102 - 38058574
Alignment:
Q |
25 |
ttggcaccatcttcacgaaacatacgccacattctttctaatccaatttcagaaatgggaattctcacaaagtcagactttactttgaaaatatcctttg |
124 |
Q |
|
|
||||||||||||||| |||||||| |||| |||| ||||||||||| ||||| |||||||||| | ||||| ||||| ||||||||| |||||||||||| |
|
|
T |
38059102 |
ttggcaccatcttcatgaaacataggccatattccttctaatccaacttcaggaatgggaattttgacaaaatcagattttactttgtaaatatcctttg |
38059003 |
T |
 |
Q |
125 |
cagcttgtatgctgttgagcaacatttcaggtgattcgcctttcggaaatccataaaggtaaagaaccgattcaatccaactcatctcaatacaatcttc |
224 |
Q |
|
|
|||| || | |||||||||||| ||||| ||| |||| |||||||||| || |||||||||||||| ||||||| |||||||||||||| ||||||||| |
|
|
T |
38059002 |
cagcaagtgttctgttgagcaacgtttcaagtggttcgtctttcggaaacccgtaaaggtaaagaactgattcaacccaactcatctcaacacaatcttc |
38058903 |
T |
 |
Q |
225 |
tctaaccaaaccaagtgctggaaacttttctaccatcaagggaatgagtttatctacacttccaagaaacaaggcttgaaataaagcttgtactgttgaa |
324 |
Q |
|
|
||||||||||||||| | |||||||| ||| ||||||| | ||||| |||||||| | ||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
38058902 |
tctaaccaaaccaagctcaggaaacttctcttgcatcaagtgtatgagcttatctactcctccaagaaacaaggcttgaaatatagcttgtactgttgat |
38058803 |
T |
 |
Q |
325 |
tttgactttccttttttacttaaatttaccctttgcaagataacataaatggctatgttttcatcaattgtacttgtcacaaactgccacttgtgaacaa |
424 |
Q |
|
|
|||||||| || ||| ||||| ||||||||||||| ||||||||| ||| ||| ||||||||||||| ||||||||| ||||||||||||||||| || |
|
|
T |
38058802 |
tttgacttcccctttatacttgaatttaccctttgtaagataacagtaatttctaagttttcatcaattctacttgtcaaaaactgccacttgtgaataa |
38058703 |
T |
 |
Q |
425 |
gctttgttgcattttgatccaatgtttttggcacattgaacactgtcacacttgatggaacttgaacaagtttaaccttccatgaaattatgactccaaa |
524 |
Q |
|
|
||||||||||||| || |||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
38058702 |
gctttgttgcattgtgttccaatgtttttggaacattgaagactgtcacaattgatggaacttgaacaagtttaatcttccatgaaattatgactccaaa |
38058603 |
T |
 |
Q |
525 |
acttgctcctccacctcctctaatagccc |
553 |
Q |
|
|
||||||||||||||| ||||||||||||| |
|
|
T |
38058602 |
acttgctcctccaccacctctaatagccc |
38058574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 28 - 553
Target Start/End: Complemental strand, 38073433 - 38072902
Alignment:
Q |
28 |
gcaccatcttcacgaaacatacgccacattctttctaatccaatttcagaaatgggaattctcacaaagtcagactttactttgaaaatatcctttgcag |
127 |
Q |
|
|
|||||||||||| ||||| | |||| | || |||||| ||| |||||| ||| |||||| | ||||| ||||| || ||||| || |||||||||||| |
|
|
T |
38073433 |
gcaccatcttcatcaaacaaaggccataatccttctaaaccagtttcaggaataggaattttgacaaaatcagatttcgctttggaattatcctttgcag |
38073334 |
T |
 |
Q |
128 |
cttgtatgctgttgagcaacatttcaggtgattcgcctttcggaaatccataaaggtaaagaaccgattcaatccaactcatctcaatacaatcttctct |
227 |
Q |
|
|
|| || | |||||||||||| ||||| ||| |||||||| ||||| | | ||||||||||||| ||||||||||||||||| |||| |||||||||||| |
|
|
T |
38073333 |
ctagtgttctgttgagcaacgtttcaagtggttcgccttctggaaaccgaaaaaggtaaagaactgattcaatccaactcatttcaacacaatcttctct |
38073234 |
T |
 |
Q |
228 |
aaccaaaccaagtgctggaaacttttctaccatcaagggaatgagtttatctacacttccaagaaacaaggcttgaaataaagcttgtactgttgaattt |
327 |
Q |
|
|
||||||||||||| | |||||||||||| |||||||||| | ||| |||||||||||||| |||||||||| ||||||||||||| |||||||||| ||| |
|
|
T |
38073233 |
aaccaaaccaagttcaggaaacttttcttccatcaagggtaagaggttatctacacttcctagaaacaaggattgaaataaagctagtactgttgacttt |
38073134 |
T |
 |
Q |
328 |
gactttccttttttac------ttaaatttaccctttgcaagataacataaatggctatgttttcatcaattgtacttgtcacaaactgccacttgtgaa |
421 |
Q |
|
|
| || |||| ||||| |||||| || |||||||||||||| || |||||||| |||||| |||| | || | ||||||||||||||||||| |
|
|
T |
38073133 |
ggctcaccttgtttacttgaatttaaatctagcctttgcaagataatattaatggctaagttttcttcaagtttatgagctacaaactgccacttgtgaa |
38073034 |
T |
 |
Q |
422 |
caagctttgttgcattttgatccaatgtttttggcacattgaacactgtcacacttgatggaacttgaacaagtttaaccttccatgaaattatgactcc |
521 |
Q |
|
|
||||||||||||||||||| ||||||||| |||| ||| | ||||| || ||| |||||||||||||||||||||||| ||||||||||| |||||| || |
|
|
T |
38073033 |
caagctttgttgcattttgttccaatgttcttggaacagtaaacaccgttacagttgatggaacttgaacaagtttaatcttccatgaaactatgacacc |
38072934 |
T |
 |
Q |
522 |
aaaacttgctcctccacctcctctaatagccc |
553 |
Q |
|
|
|||||||||||||||||| ||||||||||||| |
|
|
T |
38072933 |
aaaacttgctcctccaccacctctaatagccc |
38072902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 60 - 553
Target Start/End: Complemental strand, 38086911 - 38086412
Alignment:
Q |
60 |
ttctaatccaatttcagaaatgggaattctcacaaagtcagactttactttgaaaatatcctttgcagcttgtatgctgttgagcaacatttcaggtgat |
159 |
Q |
|
|
|||||||||| |||||| ||| |||||||||||||| ||||| ||| ||||||| ||||| || ||||||| | ||||| ||||||| |||||||| |
|
|
T |
38086911 |
ttctaatccagtttcaggaattggaattctcacaaaatcagattttgctttgaatatatcaagtgtagcttgtgttctgttaagcaacacttcaggtgta |
38086812 |
T |
 |
Q |
160 |
tcgcctttcggaaatccataaaggtaaagaaccgattcaatccaactcatctcaatacaatcttctctaaccaaaccaagtgctggaaacttttctacca |
259 |
Q |
|
|
||||| ||||| | ||| ||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| | |||||||| ||| | |
|
|
T |
38086811 |
gaaccttttggaaactgaaaaaagtaaagaacagattcaatccaactcatttcaatacaatattctctaaccaaaccaagctcaggaaacttctcttgaa |
38086712 |
T |
 |
Q |
260 |
tcaagggaatgagtttatctacacttccaagaaacaaggcttgaaataaagcttgtactgttgaatttgactttccttttttactt------aaatttac |
353 |
Q |
|
|
|||||| |||||||||||||||| |||||||||||| |||||||||||| || |||| | ||| ||||||| |||||||||||| |||||||| |
|
|
T |
38086711 |
ccaagggtatgagtttatctacacctccaagaaacaaagcttgaaataaaactagtaccggtgactttgactcaccttttttacttgaatttaaatttac |
38086612 |
T |
 |
Q |
354 |
cctttgcaagataacataaatggctatgttttcatcaattgtacttgtcacaaactgccacttgtgaacaagctttgttgcattttgatccaatgttttt |
453 |
Q |
|
|
||||||| ||| || || |||||||| |||||||||| | |||||| || ||| |||||||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
38086611 |
cctttgccagacaatattcatggctatattttcatcaagtttacttgccaaaaattgccacttgtgaacaagctttgttgcattttgttccaatgttttt |
38086512 |
T |
 |
Q |
454 |
ggcacattgaacactgtcacacttgatggaacttgaacaagtttaaccttccatgaaattatgactccaaaacttgctcctccacctcctctaatagccc |
553 |
Q |
|
|
|| ||| | |||||||||||| |||||||||||| ||||||||||| ||||||||||| |||||| |||||||||||||||||||| ||||||||||||| |
|
|
T |
38086511 |
ggaacagtaaacactgtcacaattgatggaacttcaacaagtttaatcttccatgaaactatgacaccaaaacttgctcctccaccacctctaatagccc |
38086412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 25 - 553
Target Start/End: Complemental strand, 38082518 - 38081987
Alignment:
Q |
25 |
ttggcaccatcttcacgaaacatacgccacattctttctaatccaatttcagaaatgggaattctcacaaagtcagactttactttgaaaata--tcct- |
121 |
Q |
|
|
|||||||| |||||| |||||| | ||| |||| |||||||||| |||||| ||||||| || ||||||| ||||| ||| ||||| ||||| || | |
|
|
T |
38082518 |
ttggcaccttcttcatgaaacaaagaccatattccttctaatccattttcaggaatgggagttttcacaaaatcagattttgctttgtaaataaatcttg |
38082419 |
T |
 |
Q |
122 |
------ttgcagcttgtatgctgttgagcaacatttcaggtgattcgcctttcggaaatccataaaggtaaagaaccgattcaatccaactcatctcaat |
215 |
Q |
|
|
|||||||| || | ||||| ||||||| ||||||| || | |||||||||||| | ||||||||||||||||||||||||||||||| ||||| |
|
|
T |
38082418 |
ggctgtttgcagctagtgttctgttaagcaacacttcaggtaatgcacctttcggaaattgaaaaaggtaaagaaccgattcaatccaactcatttcaat |
38082319 |
T |
 |
Q |
216 |
acaatcttctctaaccaaaccaagtgctggaaacttttctaccatcaagggaatgagtttatctacacttccaagaaacaaggcttgaaataaagcttgt |
315 |
Q |
|
|
||||| |||||| |||| ||| | | |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| | |
|
|
T |
38082318 |
acaattttctctgaccacacccaactcaggaaacttttgatccatcaagggaatgagtttatctacacctccaagaaacaaggcttgaaatatagctaga |
38082219 |
T |
 |
Q |
316 |
actgttgaatttgactttccttttttacttaaatttaccctttgcaagataacataaatggctatgttttcatcaattgtacttgtcacaaactgccact |
415 |
Q |
|
|
| ||||| || |||||||||||| |||||| |||||| |||| || || ||||||||||||||||||||| |||||| || | ||||||||| |
|
|
T |
38082218 |
attgttgt------ctcgccttttttacttgaatttatcctttgaaagacaatattgatggctatgttttcatcaattttacttgccaaatactgccact |
38082125 |
T |
 |
Q |
416 |
tgtgaacaagctttgttgcattttgatccaatgtttttggcacattgaacactgtcacacttgatggaacttgaacaagtttaaccttccatgaaattat |
515 |
Q |
|
|
||||||||||||||||||||||||| ||||||| | |||| || | ||||| ||||| ||| |||||||| ||||||||| | ||||||||||||||| |
|
|
T |
38082124 |
tgtgaacaagctttgttgcattttgttccaatgctcttggaactgtaaacaccgtcactgttgctggaacttcaacaagttttatcttccatgaaattat |
38082025 |
T |
 |
Q |
516 |
gactccaaaacttgctcctccacctcctctaatagccc |
553 |
Q |
|
|
|||||||||||||||||||||||| ||||||||||||| |
|
|
T |
38082024 |
gactccaaaacttgctcctccaccacctctaatagccc |
38081987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 193 - 298
Target Start/End: Complemental strand, 37954593 - 37954488
Alignment:
Q |
193 |
gattcaatccaactcatctcaatacaatcttctctaaccaaaccaagtgctggaaacttttctaccatcaagggaatgagtttatctacacttccaagaa |
292 |
Q |
|
|
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||| || ||| |||||||| |||||||| |
|
|
T |
37954593 |
gattcaatccaactcatctcagtacaatcttctctaaccaaaccaagctctggaaactcctcttccatcaaggggataagtccatctacacctccaagaa |
37954494 |
T |
 |
Q |
293 |
acaagg |
298 |
Q |
|
|
|||||| |
|
|
T |
37954493 |
acaagg |
37954488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 221 - 345
Target Start/End: Complemental strand, 38078103 - 38077978
Alignment:
Q |
221 |
cttctctaaccaaaccaagtgctggaaacttttctaccatcaagggaatgagtttatctacacttccaagaaa-caaggcttgaaataaagcttgtactg |
319 |
Q |
|
|
||||||||||||||||||| | |||||||| ||| ||||||||| ||||||| |||||||| ||||| ||| |||||||| |||||||||| |||||| |
|
|
T |
38078103 |
cttctctaaccaaaccaagctcaggaaacttctcttgcatcaagggcatgagttcatctacacctccaaaaaaacaaggcttaaaataaagctagtactg |
38078004 |
T |
 |
Q |
320 |
ttgaatttgactttccttttttactt |
345 |
Q |
|
|
|||| ||||||| |||||||||||| |
|
|
T |
38078003 |
ttgactttgactcaccttttttactt |
38077978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 468 - 553
Target Start/End: Complemental strand, 37954321 - 37954236
Alignment:
Q |
468 |
tgtcacacttgatggaacttgaacaagtttaaccttccatgaaattatgactccaaaacttgctcctccacctcctctaatagccc |
553 |
Q |
|
|
||||||| |||||||||| ||||| ||||| |||||||||| || || |||||||| |||||||||||||||||||||||||||| |
|
|
T |
37954321 |
tgtcacagttgatggaacatgaactagttttaccttccatgctatgataactccaaagcttgctcctccacctcctctaatagccc |
37954236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 517 - 553
Target Start/End: Complemental strand, 38125678 - 38125642
Alignment:
Q |
517 |
actccaaaacttgctcctccacctcctctaatagccc |
553 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |
|
|
T |
38125678 |
actccaaaacttgctcctccacctcctctaatagccc |
38125642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 517 - 553
Target Start/End: Complemental strand, 38129631 - 38129595
Alignment:
Q |
517 |
actccaaaacttgctcctccacctcctctaatagccc |
553 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |
|
|
T |
38129631 |
actccaaaacttgctcctccacctcctctaatagccc |
38129595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 422 - 551
Target Start/End: Original strand, 7001405 - 7001534
Alignment:
Q |
422 |
caagctttgttgcattttgatccaatgtttttggcacattgaacactgtcacacttgatggaacttgaacaagtttaaccttccatgaaattatgactcc |
521 |
Q |
|
|
|||||||||||||||||||||||||||||||||||| ||| |||||||||| |||| ||||||||| || |||||||| ||||||||||||||||||||| |
|
|
T |
7001405 |
caagctttgttgcattttgatccaatgtttttggcaaattcaacactgtcatactttatggaactttaataagtttaatcttccatgaaattatgactcc |
7001504 |
T |
 |
Q |
522 |
aaaacttgctcctccacctcctctaatagc |
551 |
Q |
|
|
|||||||||||||||| | ||||||||||| |
|
|
T |
7001505 |
aaaacttgctcctccagcacctctaatagc |
7001534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 452
Target Start/End: Complemental strand, 10793055 - 10792936
Alignment:
Q |
336 |
ttttttacttaaatttaccctttgcaagataacataa---atggctatgttttcatcaattgtacttgtcacaaactgccacttgtgaacaagctttgtt |
432 |
Q |
|
|
|||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||| |||||||||||| |||||| ||||||||||| |||||| |
|
|
T |
10793055 |
ttttttacttgaatttacccttagcaagataacataattaatggctatgtttgcatcaattatacttgtcacaagctgccaattgtgaacaagttttgtt |
10792956 |
T |
 |
Q |
433 |
gcattttgatccaatgtttt |
452 |
Q |
|
|
|||||||||||||||||||| |
|
|
T |
10792955 |
gcattttgatccaatgtttt |
10792936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 551
Target Start/End: Complemental strand, 10792924 - 10792892
Alignment:
Q |
519 |
tccaaaacttgctcctccacctcctctaatagc |
551 |
Q |
|
|
||||||||||||||||||||||||||||||||| |
|
|
T |
10792924 |
tccaaaacttgctcctccacctcctctaatagc |
10792892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 336 - 452
Target Start/End: Original strand, 34268580 - 34268699
Alignment:
Q |
336 |
ttttttacttaaatttaccctttgcaagataacataa---atggctatgttttcatcaattgtacttgtcacaaactgccacttgtgaacaagctttgtt |
432 |
Q |
|
|
|||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||| |||||||||||| |||||| ||||||||||| |||||| |
|
|
T |
34268580 |
ttttttacttgaatttacccttagcaagataacataattaatggctatgtttgcatcaattatacttgtcacaagctgccaattgtgaacaagttttgtt |
34268679 |
T |
 |
Q |
433 |
gcattttgatccaatgtttt |
452 |
Q |
|
|
|||||||||||||||||||| |
|
|
T |
34268680 |
gcattttgatccaatgtttt |
34268699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 551
Target Start/End: Original strand, 34268711 - 34268743
Alignment:
Q |
519 |
tccaaaacttgctcctccacctcctctaatagc |
551 |
Q |
|
|
||||||||||||||||||||||||||||||||| |
|
|
T |
34268711 |
tccaaaacttgctcctccacctcctctaatagc |
34268743 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 553
Target Start/End: Original strand, 11803511 - 11803605
Alignment:
Q |
459 |
attgaacactgtcacacttgatggaacttgaacaagtttaaccttccatgaaattatgactccaaaacttgctcctccacctcctctaatagccc |
553 |
Q |
|
|
|||||| |||||||| |||| |||||||| ||||| || || ||||||| | | || |||||||| |||| |||||||||||||| ||||||| |
|
|
T |
11803511 |
attgaaaactgtcactattgaaggaacttgtacaagcttgactttccatgcagtaatcactccaaagcttgaccctccacctcctcttatagccc |
11803605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 256 times since January 2019
Visitors: 3648