View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0529_high_11 (Length: 437)

Name: NF0529_high_11
Description: NF0529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0529_high_11
NF0529_high_11
[»] chr7 (43 HSPs)
chr7 (14-376)||(11272439-11272811)
chr7 (209-284)||(28155598-28155672)
chr7 (209-284)||(19213831-19213911)
chr7 (209-246)||(21880180-21880217)
chr7 (229-284)||(6490780-6490834)
chr7 (247-284)||(5409772-5409809)
chr7 (209-246)||(25481930-25481967)
chr7 (247-284)||(38134336-38134373)
chr7 (248-284)||(18212974-18213010)
chr7 (206-246)||(21864833-21864873)
chr7 (252-284)||(23128604-23128636)
chr7 (209-284)||(30813840-30813915)
chr7 (209-284)||(35861992-35862069)
chr7 (248-284)||(40131940-40131976)
chr7 (210-245)||(7197292-7197327)
chr7 (209-240)||(18039027-18039058)
chr7 (209-240)||(21560531-21560562)
chr7 (209-240)||(24339670-24339701)
chr7 (209-240)||(27945069-27945100)
chr7 (249-284)||(29763130-29763165)
chr7 (211-286)||(9482964-9483042)
chr7 (229-284)||(29812599-29812658)
chr7 (247-284)||(598289-598326)
chr7 (209-284)||(3991352-3991431)
chr7 (209-246)||(8234174-8234211)
chr7 (247-284)||(9778586-9778623)
chr7 (209-246)||(15680837-15680874)
chr7 (235-284)||(21568562-21568610)
chr7 (247-284)||(21864889-21864926)
chr7 (247-284)||(23751980-23752017)
chr7 (247-284)||(24105759-24105796)
chr7 (247-284)||(24339734-24339771)
chr7 (211-240)||(25822685-25822714)
chr7 (209-246)||(25956473-25956510)
chr7 (247-284)||(28973882-28973919)
chr7 (235-284)||(32093955-32094004)
chr7 (247-284)||(32287404-32287441)
chr7 (209-246)||(33994240-33994277)
chr7 (247-284)||(38804490-38804527)
chr7 (212-245)||(40287352-40287385)
chr7 (247-284)||(43027405-43027442)
chr7 (256-285)||(49107895-49107924)
chr7 (251-287)||(18035803-18035839)
[»] chr5 (43 HSPs)
chr5 (209-284)||(6247650-6247728)
chr5 (209-284)||(15884016-15884095)
chr5 (209-284)||(6326254-6326328)
chr5 (209-284)||(24906253-24906332)
chr5 (209-245)||(21191051-21191087)
chr5 (209-284)||(10298597-10298668)
chr5 (247-284)||(14873603-14873640)
chr5 (209-283)||(16203746-16203826)
chr5 (247-284)||(17123128-17123165)
chr5 (209-246)||(21576739-21576776)
chr5 (247-284)||(35017124-35017161)
chr5 (247-284)||(38464314-38464351)
chr5 (247-283)||(21190998-21191034)
chr5 (248-284)||(21576686-21576722)
chr5 (209-245)||(33178053-33178089)
chr5 (229-284)||(39695952-39696005)
chr5 (229-279)||(6035541-6035592)
chr5 (206-241)||(15382504-15382539)
chr5 (209-240)||(21542058-21542089)
chr5 (249-284)||(22423765-22423800)
chr5 (232-283)||(41995531-41995581)
chr5 (250-284)||(2548464-2548498)
chr5 (209-243)||(8420055-8420089)
chr5 (250-284)||(14674333-14674367)
chr5 (209-239)||(21351906-21351936)
chr5 (250-284)||(36838615-36838649)
chr5 (248-282)||(39268541-39268575)
chr5 (250-284)||(39698636-39698670)
chr5 (249-283)||(43001888-43001922)
chr5 (248-281)||(4105341-4105374)
chr5 (247-284)||(7677797-7677834)
chr5 (251-284)||(15086563-15086596)
chr5 (250-283)||(18421779-18421812)
chr5 (247-284)||(19820329-19820366)
chr5 (235-284)||(27932305-27932353)
chr5 (209-246)||(28588668-28588705)
chr5 (209-246)||(43564909-43564946)
chr5 (247-284)||(43564962-43564999)
chr5 (209-245)||(2548415-2548451)
chr5 (248-284)||(3966596-3966632)
chr5 (210-246)||(30502382-30502418)
chr5 (210-246)||(30542725-30542761)
chr5 (209-245)||(42893388-42893424)
[»] chr1 (51 HSPs)
chr1 (209-284)||(35702543-35702619)
chr1 (209-284)||(22881568-22881647)
chr1 (209-284)||(24334665-24334736)
chr1 (209-284)||(35919227-35919307)
chr1 (209-284)||(13436486-13436561)
chr1 (209-246)||(19058850-19058887)
chr1 (209-246)||(51410053-51410090)
chr1 (247-283)||(1486646-1486682)
chr1 (209-245)||(18337357-18337393)
chr1 (206-246)||(46348377-46348417)
chr1 (209-284)||(46940749-46940824)
chr1 (209-246)||(1815285-1815322)
chr1 (209-246)||(22515881-22515918)
chr1 (206-239)||(28273089-28273122)
chr1 (210-247)||(31672888-31672925)
chr1 (209-246)||(38078655-38078692)
chr1 (209-246)||(40258927-40258964)
chr1 (209-246)||(41877464-41877501)
chr1 (211-244)||(42359445-42359478)
chr1 (247-284)||(47989589-47989626)
chr1 (248-284)||(37598913-37598949)
chr1 (247-283)||(42359391-42359427)
chr1 (206-246)||(52903274-52903314)
chr1 (209-240)||(6612171-6612202)
chr1 (249-284)||(22947813-22947848)
chr1 (209-240)||(24577186-24577217)
chr1 (209-283)||(25452108-25452179)
chr1 (211-246)||(37598861-37598896)
chr1 (229-284)||(42325623-42325677)
chr1 (209-240)||(47989525-47989556)
chr1 (249-283)||(16297223-16297257)
chr1 (250-284)||(21365993-21366027)
chr1 (250-284)||(22515828-22515862)
chr1 (209-284)||(28663636-28663715)
chr1 (229-284)||(5376448-5376500)
chr1 (247-284)||(9828136-9828173)
chr1 (247-284)||(16812637-16812674)
chr1 (209-238)||(21378606-21378635)
chr1 (209-246)||(21620983-21621020)
chr1 (247-284)||(27965941-27965978)
chr1 (247-284)||(34741927-34741964)
chr1 (247-284)||(40917841-40917878)
chr1 (248-285)||(45534130-45534167)
chr1 (209-284)||(2288126-2288198)
chr1 (248-284)||(15765840-15765876)
chr1 (209-245)||(18190103-18190139)
chr1 (248-284)||(18556386-18556422)
chr1 (209-245)||(30749868-30749904)
chr1 (209-245)||(30771319-30771355)
chr1 (248-284)||(36878548-36878584)
chr1 (249-285)||(40258873-40258909)
[»] chr6 (44 HSPs)
chr6 (206-284)||(7938141-7938218)
chr6 (209-274)||(21924902-21924966)
chr6 (209-272)||(9911495-9911559)
chr6 (208-246)||(16388211-16388249)
chr6 (209-246)||(28152126-28152163)
chr6 (209-246)||(28715323-28715360)
chr6 (209-246)||(34595162-34595199)
chr6 (209-245)||(7977825-7977861)
chr6 (209-282)||(9025448-9025525)
chr6 (209-246)||(6898275-6898312)
chr6 (235-284)||(8805525-8805574)
chr6 (209-246)||(26402674-26402711)
chr6 (209-285)||(31959187-31959269)
chr6 (247-284)||(32839572-32839609)
chr6 (209-246)||(32978893-32978930)
chr6 (213-285)||(1700384-1700455)
chr6 (248-284)||(17327591-17327627)
chr6 (249-285)||(17341621-17341657)
chr6 (247-283)||(26178620-26178656)
chr6 (249-284)||(3209482-3209517)
chr6 (249-284)||(4878025-4878060)
chr6 (211-246)||(8776967-8777002)
chr6 (209-240)||(10770674-10770705)
chr6 (209-240)||(16766725-16766756)
chr6 (207-246)||(23771604-23771643)
chr6 (209-247)||(426507-426545)
chr6 (250-284)||(17841530-17841564)
chr6 (248-286)||(27903961-27903999)
chr6 (247-285)||(31385011-31385049)
chr6 (209-246)||(403858-403895)
chr6 (209-246)||(4877971-4878008)
chr6 (251-284)||(7723200-7723233)
chr6 (233-282)||(8389411-8389459)
chr6 (247-284)||(8714072-8714109)
chr6 (211-240)||(9107370-9107399)
chr6 (209-238)||(9522919-9522948)
chr6 (209-246)||(17841583-17841620)
chr6 (209-246)||(27904030-27904067)
chr6 (207-240)||(34197137-34197170)
chr6 (247-284)||(34595215-34595252)
chr6 (209-245)||(7265588-7265624)
chr6 (209-241)||(7801155-7801187)
chr6 (248-284)||(8365449-8365485)
chr6 (248-284)||(10339055-10339091)
[»] chr4 (45 HSPs)
chr4 (218-284)||(30094066-30094131)
chr4 (209-284)||(30298975-30299047)
chr4 (209-284)||(30327843-30327915)
chr4 (209-270)||(6879435-6879496)
chr4 (209-284)||(42640557-42640642)
chr4 (209-246)||(12797332-12797369)
chr4 (209-246)||(16073422-16073459)
chr4 (209-284)||(17425348-17425420)
chr4 (209-244)||(21945531-21945566)
chr4 (247-284)||(5775305-5775342)
chr4 (247-284)||(23292927-23292964)
chr4 (209-246)||(23292980-23293017)
chr4 (206-239)||(28000743-28000776)
chr4 (209-246)||(28964242-28964279)
chr4 (209-246)||(29205472-29205509)
chr4 (209-246)||(49431054-49431091)
chr4 (209-246)||(54580017-54580054)
chr4 (248-284)||(715546-715582)
chr4 (248-284)||(752872-752908)
chr4 (248-284)||(16184913-16184949)
chr4 (249-284)||(4383449-4383484)
chr4 (250-284)||(3064869-3064903)
chr4 (209-283)||(22440559-22440631)
chr4 (248-282)||(28084606-28084640)
chr4 (216-246)||(34306798-34306828)
chr4 (209-246)||(482232-482269)
chr4 (209-246)||(2361969-2362006)
chr4 (209-246)||(4157177-4157214)
chr4 (209-246)||(4157464-4157501)
chr4 (209-246)||(8423712-8423749)
chr4 (247-284)||(11596298-11596335)
chr4 (247-284)||(12895215-12895252)
chr4 (207-240)||(16303266-16303299)
chr4 (247-284)||(28470446-28470483)
chr4 (247-284)||(36635411-36635448)
chr4 (247-284)||(40784034-40784071)
chr4 (247-284)||(53381531-53381568)
chr4 (249-285)||(3947701-3947737)
chr4 (248-284)||(5922532-5922568)
chr4 (209-284)||(10499228-10499301)
chr4 (249-285)||(14126063-14126099)
chr4 (209-284)||(20633510-20633589)
chr4 (248-284)||(28964189-28964225)
chr4 (248-284)||(29205550-29205586)
chr4 (206-242)||(38847010-38847046)
[»] chr8 (34 HSPs)
chr8 (209-284)||(25566869-25566948)
chr8 (209-284)||(4948680-4948753)
chr8 (209-284)||(31514901-31514972)
chr8 (229-284)||(13436911-13436964)
chr8 (209-248)||(24613548-24613587)
chr8 (209-284)||(24669461-24669535)
chr8 (249-284)||(36450695-36450730)
chr8 (209-284)||(8343000-8343085)
chr8 (247-284)||(8343408-8343445)
chr8 (251-284)||(11833935-11833968)
chr8 (247-284)||(16641910-16641947)
chr8 (209-246)||(20873097-20873134)
chr8 (209-246)||(30271249-30271286)
chr8 (209-246)||(40332219-40332256)
chr8 (229-273)||(17468457-17468503)
chr8 (207-246)||(22204667-22204706)
chr8 (211-246)||(36450748-36450783)
chr8 (208-242)||(15023255-15023289)
chr8 (250-284)||(18964274-18964308)
chr8 (209-243)||(22596022-22596056)
chr8 (209-247)||(30077380-30077418)
chr8 (251-284)||(4673355-4673388)
chr8 (247-284)||(15816059-15816096)
chr8 (247-284)||(17751737-17751774)
chr8 (247-284)||(17760724-17760761)
chr8 (209-246)||(18407747-18407784)
chr8 (247-284)||(22652068-22652105)
chr8 (247-284)||(24858097-24858134)
chr8 (247-284)||(29510234-29510271)
chr8 (209-246)||(31557024-31557061)
chr8 (247-284)||(39820509-39820546)
chr8 (247-283)||(16987994-16988030)
chr8 (249-285)||(29447039-29447075)
chr8 (248-280)||(31109463-31109495)
[»] scaffold0004 (2 HSPs)
scaffold0004 (209-286)||(123656-123733)
scaffold0004 (236-284)||(92893-92940)
[»] chr2 (46 HSPs)
chr2 (206-284)||(20539633-20539708)
chr2 (209-247)||(19536390-19536428)
chr2 (206-285)||(20473347-20473428)
chr2 (213-283)||(42832234-42832303)
chr2 (209-246)||(2438713-2438750)
chr2 (209-246)||(21624295-21624332)
chr2 (211-246)||(15972903-15972938)
chr2 (209-246)||(5040762-5040799)
chr2 (247-284)||(22084757-22084794)
chr2 (208-245)||(27460064-27460101)
chr2 (209-246)||(30404844-30404881)
chr2 (206-247)||(34691798-34691839)
chr2 (206-247)||(34714210-34714251)
chr2 (247-284)||(37419835-37419872)
chr2 (247-283)||(2438661-2438697)
chr2 (229-286)||(5473376-5473435)
chr2 (209-245)||(18421991-18422027)
chr2 (248-284)||(26769604-26769640)
chr2 (210-284)||(44635527-44635611)
chr2 (209-239)||(11223864-11223894)
chr2 (250-284)||(18420364-18420398)
chr2 (246-284)||(34221464-34221502)
chr2 (209-243)||(37559005-37559039)
chr2 (207-240)||(4882696-4882729)
chr2 (209-246)||(5367220-5367257)
chr2 (247-284)||(11223794-11223831)
chr2 (209-246)||(12224251-12224288)
chr2 (235-284)||(12748737-12748785)
chr2 (206-239)||(14996224-14996257)
chr2 (247-284)||(18840954-18840991)
chr2 (209-246)||(18841007-18841044)
chr2 (247-284)||(23354582-23354619)
chr2 (209-246)||(28596497-28596534)
chr2 (212-245)||(33884082-33884115)
chr2 (247-284)||(38117100-38117137)
chr2 (235-284)||(41843516-41843564)
chr2 (209-246)||(43585999-43586036)
chr2 (212-240)||(974778-974806)
chr2 (248-284)||(3444827-3444863)
chr2 (247-283)||(19942346-19942382)
chr2 (209-245)||(20242722-20242758)
chr2 (247-283)||(23354926-23354962)
chr2 (248-284)||(34784912-34784948)
chr2 (257-285)||(35449600-35449628)
chr2 (251-283)||(36756275-36756307)
chr2 (248-284)||(42511323-42511359)
[»] scaffold0083 (1 HSPs)
scaffold0083 (209-246)||(45524-45561)
[»] chr3 (45 HSPs)
chr3 (209-246)||(25775537-25775574)
chr3 (206-246)||(8383282-8383322)
chr3 (209-284)||(13414497-13414571)
chr3 (209-246)||(10954980-10955017)
chr3 (251-284)||(11252061-11252094)
chr3 (209-246)||(16000010-16000047)
chr3 (209-246)||(20503493-20503530)
chr3 (247-284)||(20503546-20503583)
chr3 (247-284)||(34185053-34185090)
chr3 (207-283)||(40150527-40150604)
chr3 (209-246)||(55401103-55401140)
chr3 (206-246)||(7171526-7171566)
chr3 (236-284)||(8789489-8789536)
chr3 (206-246)||(26492199-26492239)
chr3 (209-245)||(51206348-51206384)
chr3 (249-284)||(4990913-4990948)
chr3 (209-244)||(8587017-8587052)
chr3 (209-244)||(8593165-8593200)
chr3 (249-284)||(28812609-28812644)
chr3 (209-240)||(28918029-28918060)
chr3 (209-247)||(7928478-7928516)
chr3 (250-284)||(8842413-8842447)
chr3 (209-284)||(11610549-11610627)
chr3 (206-240)||(14216917-14216951)
chr3 (206-240)||(14223046-14223080)
chr3 (207-245)||(15505785-15505823)
chr3 (206-240)||(15796294-15796328)
chr3 (225-284)||(40052370-40052430)
chr3 (250-284)||(55401159-55401193)
chr3 (209-246)||(3865702-3865739)
chr3 (209-270)||(10268457-10268517)
chr3 (247-284)||(14979230-14979267)
chr3 (229-282)||(21367330-21367382)
chr3 (247-284)||(27505332-27505369)
chr3 (211-240)||(34185123-34185152)
chr3 (247-284)||(34910398-34910435)
chr3 (209-246)||(35994733-35994769)
chr3 (247-284)||(40993276-40993313)
chr3 (209-246)||(40993329-40993366)
chr3 (247-283)||(4987222-4987258)
chr3 (256-284)||(5339197-5339225)
chr3 (206-238)||(17005621-17005653)
chr3 (248-284)||(21211376-21211412)
chr3 (209-237)||(26508138-26508166)
chr3 (248-284)||(41961580-41961616)
[»] scaffold0652 (2 HSPs)
scaffold0652 (211-246)||(456-491)
scaffold0652 (247-285)||(402-440)
[»] scaffold0050 (1 HSPs)
scaffold0050 (209-246)||(70306-70343)
[»] scaffold0793 (1 HSPs)
scaffold0793 (248-284)||(4822-4858)
[»] scaffold0475 (1 HSPs)
scaffold0475 (248-284)||(3390-3426)
[»] scaffold0053 (1 HSPs)
scaffold0053 (206-246)||(8823-8863)
[»] scaffold0027 (1 HSPs)
scaffold0027 (209-284)||(46710-46775)
[»] scaffold0025 (1 HSPs)
scaffold0025 (209-240)||(23798-23829)
[»] scaffold0512 (2 HSPs)
scaffold0512 (250-284)||(4977-5011)
scaffold0512 (218-246)||(5030-5058)
[»] scaffold0168 (1 HSPs)
scaffold0168 (250-284)||(21372-21406)
[»] scaffold0049 (1 HSPs)
scaffold0049 (209-262)||(63801-63853)
[»] scaffold0019 (1 HSPs)
scaffold0019 (247-284)||(71817-71854)
[»] scaffold0003 (2 HSPs)
scaffold0003 (247-284)||(236915-236952)
scaffold0003 (247-284)||(241686-241723)
[»] scaffold0227 (1 HSPs)
scaffold0227 (248-284)||(15053-15089)
[»] scaffold0122 (1 HSPs)
scaffold0122 (206-246)||(8035-8074)
[»] scaffold0021 (1 HSPs)
scaffold0021 (209-237)||(130510-130538)


Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 14 - 376
Target Start/End: Complemental strand, 11272811 - 11272439
Alignment:
Q  14 agaaggagtttcttgcagaagtatagacactagagataatgtttgcaatcgctgacttccaagggatccatctgttattaaacctagcagcatttcttgc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11272811 agaaggagtttcttgcagaagtatagacactagagataatgtttgctatcgctgacttccaagggatccatctattattaaacctagcagcatttcttgc 11272712  T
Q  114 ctgccatatcacattgaaaacattgattagggcagcttgcattactagcttgcactgagacgccgacacaactgataatttgnnnnnnntcacatataat 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||    
T  11272711 ctgccatatcacattgaaaacattgattagggcagcttgcattactagcttgcactgagacgccgacacaactgataatttg-aaaaaatcacatataat 11272613  T
Q  214 tcagtgtaattacaa-----------gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataagcctctatcacataggg 302  Q
    |||||||||||||||           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11272612 tcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgcgggacacgcctaatccgaggagtatctgtgcttcataagcctctatcacataggg 11272513  T
Q  303 acgtacacatcctccaaagagggaaactggatagttttttgaatgactgatgccttccatctccataaatgcac 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||||||    
T  11272512 acgtacacatcctccaaagagggaaactggatagttttttgaatgactgatgtcttccatcaacgtaaatgcac 11272439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 28155598 - 28155672
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||| ||||||||||||||||||||||||||||| | ||||||||||||||| |||| |||| ||||||||||    
T  28155598 ataattcggtgtaattacaagtgtcggtgtcggacac-caggacacgcctaatccaaggaatgtccgtgcttcata 28155672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 19213831 - 19213911
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg--cgggaca---cgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||| |||||||| |||||||||||||||||||||||  |||||||   |||||||||||||||||||| ||||||||||    
T  19213831 ataatgcagtgtaaatacaagtgtcggtgtcggacacgaccgggacacgccgcctaatccgaggagtgtccgtgcttcata 19213911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 21880180 - 21880217
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21880180 ataattcagtgtaattacaagtgtcggtgtcggacacg 21880217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 6490780 - 6490834
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||| ||||| |||||||||| |||||||||||||||| ||||||||||    
T  6490780 gtgtcggtgtccgacac-cgggacacgcttaatccgaggagtgtccgtgcttcata 6490834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 5409809 - 5409772
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  5409809 cgggacacgcctaatccgaggagtgtccgtgcttcata 5409772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 25481930 - 25481967
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||| |||||||||||||    
T  25481930 ataattcagtgtaattacaagtgttggtgtcggacacg 25481967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 38134373 - 38134336
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||| |||||||||||    
T  38134373 cgggacacgcctaatccgaggagtgtatgtgcttcata 38134336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 18213010 - 18212974
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||| |||||||||||||||||||||||||    
T  18213010 gggacacgccttatccgaggagtgtctgtgcttcata 18212974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 21864833 - 21864873
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  21864833 catataatttagtgtaattacaagtgtcgctgtcggacacg 21864873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 23128636 - 23128604
Alignment:
Q  252 cacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||||||||||    
T  23128636 cacgcctaatccgaggagtgtctgtgcttcata 23128604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 30813840 - 30813915
Alignment:
Q  209 ataattcagtgtaattacaagtgtcg-gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||| |||| | ||||| ||||  | | ||||||||||||||||||||||| ||||||||||    
T  30813840 ataattcagtgtaattacaggtgttgcgtgtccgacat-cagaacacgcctaatccgaggagtgtccgtgcttcata 30813915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 35861992 - 35862069
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg---gacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||  ||||||| ||||||   |||||| || ||||||||||||||||||||||| ||||||||||    
T  35861992 ataattcaatgtaattgtaagtgtctgtgtcgtcggacacgagg-acacgcctaatccgaggagtgtccgtgcttcata 35862069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 40131976 - 40131940
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| ||||||||||||||||||||||||||||    
T  40131976 gggacacgtctaatccgaggagtgtctgtgcttcata 40131940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 7197327 - 7197292
Alignment:
Q  210 taattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||| ||||||||||||||||||||||||||||    
T  7197327 taattcaatgtaattacaagtgtcggtgtcggacac 7197292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 18039027 - 18039058
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  18039027 ataattcagtgtaattacaagtgtcggtgtcg 18039058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 21560531 - 21560562
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  21560531 ataattcagtgtaattacaagtgtcggtgtcg 21560562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 24339670 - 24339701
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  24339670 ataattcagtgtaattacaagtgtcggtgtcg 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 27945069 - 27945100
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  27945069 ataattcagtgtaattacaagtgtcggtgtcg 27945100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 29763165 - 29763130
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||| ||||||||||    
T  29763165 ggacacgcctaatccgaggagtgtccgtgcttcata 29763130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 286
Target Start/End: Original strand, 9482964 - 9483042
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcataag 286  Q
    ||||||||||||||| | ||||||||||||||| ||    ||||||||| ||||| |||| |||||| ||||||||||||    
T  9482964 aattcagtgtaattatatgtgtcggtgtcggacgcgacaccgggacacg-ctaatacgagaagtgtccgtgcttcataag 9483042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 29812658 - 29812599
Alignment:
Q  229 gtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||     |||||||||||||||||||| |||||| ||||||||||    
T  29812658 gtgtcggtgtcggacaccgacacgggacacgcctaatccgagaagtgtccgtgcttcata 29812599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 598289 - 598326
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  598289 cgggacacgcctaatccgagaagtgtccgtgcttcata 598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 3991352 - 3991431
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg--gacacgc--gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||| |||||||||||||||||||||  |   ||   |||||||||||||||||||||||||| | ||||||||    
T  3991352 ataattcagtataattacaagtgtcggtgtcgtcgtatcgactgggacacgcctaatccgaggagtgtccgggcttcata 3991431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 8234174 - 8234211
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  8234174 ataattcagtgtagttacaagtgccggtgtcggacacg 8234211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 9778586 - 9778623
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  9778586 cgggacacgcctaatccaaggagtgtccgtgcttcata 9778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 15680837 - 15680874
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  15680837 ataatttagtgtaattataagtgtcggtgtcggacacg 15680874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 21568610 - 21568562
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||| ||||||| || ||||| |||||||||||||||||||||    
T  21568610 gtgtcggacac-cgggacatgcttaatctgaggagtgtctgtgcttcata 21568562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 21864889 - 21864926
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  21864889 cgggacacgtctaattcgaggagtgtctgtgcttcata 21864926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 23751980 - 23752017
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||  |||||||||||||||||    
T  23751980 cgggacacgcctaatccgataagtgtctgtgcttcata 23752017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 24105759 - 24105796
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  24105759 cgggacacgcctaacccgaggagtgtttgtgcttcata 24105796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 24339734 - 24339771
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  24339734 cgggacacgcctaatccgaggagtgcccgtgcttcata 24339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 240
Target Start/End: Original strand, 25822685 - 25822714
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||    
T  25822685 aattcagtgtaattacaagtgtcggtgtcg 25822714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 25956473 - 25956510
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  25956473 ataattcaatgtaatcacaagtgtcggtgtcggacacg 25956510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 28973919 - 28973882
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  28973919 cgggacacgcctaatccgaggtgtgtccgtgcttcata 28973882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 32094004 - 32093955
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||| |||||  |||||||||||||||||||||||||  ||||||||||    
T  32094004 gtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcata 32093955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 32287441 - 32287404
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  32287441 cgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 33994240 - 33994277
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  33994240 ataattcagtgcaattacaagtgtcggtgtcagacacg 33994277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 38804527 - 38804490
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  38804527 cgggacatgcctaatccgaggagtgtatgtgcttcata 38804490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 40287385 - 40287352
Alignment:
Q  212 attcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||||||||||| ||||||||    
T  40287385 attcagtgtaattacaagtgtcggtatcggacac 40287352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 43027442 - 43027405
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  43027442 cgggacacgcctaatccgatgagtgtccgtgcttcata 43027405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 285
Target Start/End: Original strand, 49107895 - 49107924
Alignment:
Q  256 cctaatccgaggagtgtctgtgcttcataa 285  Q
    ||||||||||||||||||||||||||||||    
T  49107895 cctaatccgaggagtgtctgtgcttcataa 49107924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 18035839 - 18035803
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcataagc 287  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  18035839 acacgtctaatccgaggagtgtccgtgcttcataagc 18035803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 6247650 - 6247728
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg---cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||| |||||||||||||||||    
T  6247650 ataattcagtgtaattacaagtgtcggtgtcggacacggcacgggacacacctaatccgagaagtgtctgtgcttcata 6247728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 15884016 - 15884095
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||||||| ||||||    
T  15884016 ataattcagtgtaattacaagtgtcggtgtcggacacgacactggaacacgcctaatccgaggagtgtctgtgtttcata 15884095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 6326328 - 6326254
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||| | ||||||||| ||| ||||||||||| |||| |||||| ||||||||||    
T  6326328 ataattcagtgtaattacaagtgtcagcgtcggacac-cggaacacgcctaattcgagaagtgtccgtgcttcata 6326254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 24906332 - 24906253
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||||| ||||||| |      ||||||||||||| ||||||||||| ||||||||||    
T  24906332 ataattcagtgtaattacaagtgtcggtatcggacatgacaataggacacgcctaattcgaggagtgtccgtgcttcata 24906253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 21191087 - 21191051
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||||||||||||||||||||||||||    
T  21191087 ataattcagtgtaattacaagtgtcggtgtcggacac 21191051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 10298597 - 10298668
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||| || ||||||||||||||||||||||| |      ||||||||||||||||||||||||| ||||||||||    
T  10298597 ataatacaatgtaattacaagtgtcggtgtcgtatc----ggacacgcctaatccgaggagtgtccgtgcttcata 10298668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 14873603 - 14873640
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  14873603 cgggacacgcctaatccgaggagtgtccgtgcttcata 14873640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 16203826 - 16203746
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg------cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||| |||||||||| | |||||||||||||||| |      ||| |||||| ||||||||||||||||||||||||||    
T  16203826 ataatttagtgtaattatatgtgtcggtgtcggacaagacacaccggtacacgcttaatccgaggagtgtctgtgcttcat 16203746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 17123128 - 17123165
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  17123128 cgggacacgcctaatccgaggagtgtccgtgcttcata 17123165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 21576776 - 21576739
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||| |||||||||||    
T  21576776 ataattcagtgtaattacaagtgtcgatgtcggacacg 21576739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 35017124 - 35017161
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  35017124 cgggacacgcctaatccgaggagtgtccgtgcttcata 35017161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 38464351 - 38464314
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||||||||||||||||||||||||    
T  38464351 cgggacacacctaatccgaggagtgtctgtgcttcata 38464314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 21191034 - 21190998
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||||||||||||| |||||||||    
T  21191034 cgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 21576722 - 21576686
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||| ||||||||||    
T  21576722 gggacacgcctaatccgaggagtgtccgtgcttcata 21576686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 33178053 - 33178089
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||| ||||||||||||||||||||||||||||||    
T  33178053 ataatttagtgtaattacaagtgtcggtgtcggacac 33178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 39696005 - 39695952
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||| ||||||  ||||||||||||||| ||||||||| ||||||||||    
T  39696005 gtgtcggtgtccgacacg--ggacacgcctaatcctaggagtgtcggtgcttcata 39695952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 6035541 - 6035592
Alignment:
Q  229 gtgtcggtgtcggacacgc-gggacacgcctaatccgaggagtgtctgtgct 279  Q
    ||||||||| | ||||||| ||||||||||||||| ||||||||||||||||    
T  6035541 gtgtcggtgacagacacgccgggacacgcctaatctgaggagtgtctgtgct 6035592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 241
Target Start/End: Original strand, 15382504 - 15382539
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcgg 241  Q
    ||||||||||||| ||||||||||||||||||||||    
T  15382504 catataattcagtataattacaagtgtcggtgtcgg 15382539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 21542058 - 21542089
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  21542058 ataattcagtgtaattacaagtgtcggtgtcg 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 22423800 - 22423765
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||| ||||||||||    
T  22423800 ggacacgcctaatccgaggagtgtccgtgcttcata 22423765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 41995531 - 41995581
Alignment:
Q  232 tcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||| || ||||||||||||| ||||||||| |||||||||    
T  41995531 tcggtgtcggacacgagg-acacgcctaatcctaggagtgtccgtgcttcat 41995581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 2548464 - 2548498
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||| |||||||||||||||||||||||||||||    
T  2548464 gacacacctaatccgaggagtgtctgtgcttcata 2548498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 8420055 - 8420089
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggac 243  Q
    |||||||| ||||||||||||||||||||||||||    
T  8420055 ataattcaatgtaattacaagtgtcggtgtcggac 8420089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 14674333 - 14674367
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||| |||||||||||||||||||||||||||||    
T  14674333 gacacacctaatccgaggagtgtctgtgcttcata 14674367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 239
Target Start/End: Complemental strand, 21351936 - 21351906
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtc 239  Q
    |||||||||||||||||||||||||||||||    
T  21351936 ataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 36838615 - 36838649
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||| ||||||||||||||||||||    
T  36838615 gacacgcctaatccaaggagtgtctgtgcttcata 36838649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 282
Target Start/End: Complemental strand, 39268575 - 39268541
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttca 282  Q
    |||||||||||||||||||||||||| ||||||||    
T  39268575 gggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 39698636 - 39698670
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||| ||||||||||    
T  39698636 gacacgcctaatccgaggagtgtccgtgcttcata 39698670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 43001888 - 43001922
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||||||||||| |||||||||    
T  43001888 ggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 281
Target Start/End: Original strand, 4105341 - 4105374
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttc 281  Q
    |||||||||||||||||||||||||| |||||||    
T  4105341 gggacacgcctaatccgaggagtgtccgtgcttc 4105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 7677797 - 7677834
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  7677797 cgggacacgcctaatccgaggagagtcggtgcttcata 7677834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 284
Target Start/End: Original strand, 15086563 - 15086596
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||| |||||||||    
T  15086563 acacgcctaatccgaggagtgtctttgcttcata 15086596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 18421812 - 18421779
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||| |||||||||||||||||||||||||||    
T  18421812 gacacgtctaatccgaggagtgtctgtgcttcat 18421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 19820366 - 19820329
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  19820366 cgggacacgcctaatcagaggagtgtccgtgcttcata 19820329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 27932305 - 27932353
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||| | ||||||||||||| |||||||||| |||||||||||    
T  27932305 gtgtcggacac-caggacacgcctaattcgaggagtgtttgtgcttcata 27932353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 28588705 - 28588668
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  28588705 ataattcagtgtaattataggtgtcggtgtcggacacg 28588668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 43564909 - 43564946
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  43564909 ataatttagtgtaattataagtgtcggtgtcggacacg 43564946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 43564962 - 43564999
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  43564962 cgggacacgcctaatccgagaagtgtccgtgcttcata 43564999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 2548415 - 2548451
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||| | |||||||||||||||||||    
T  2548415 ataattcagtgtaatcataagtgtcggtgtcggacac 2548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 3966596 - 3966632
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  3966596 gggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 30502418 - 30502382
Alignment:
Q  210 taattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||| | ||||||||||||||||||    
T  30502418 taattcagtgtaattatatgtgtcggtgtcggacacg 30502382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 246
Target Start/End: Complemental strand, 30542761 - 30542725
Alignment:
Q  210 taattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||| | ||||||||||||||||||    
T  30542761 taattcagtgtaattatatgtgtcggtgtcggacacg 30542725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 42893388 - 42893424
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  42893388 ataatccagtgtaattacaagtgtcggtgtcagacac 42893424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 35702619 - 35702543
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgc-gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||| |||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  35702619 ataattaagtgtaattacaagtgtcagtgtcggacacgatgggacacgcctaatccgaggagtgtccgtgcttcata 35702543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 22881647 - 22881568
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||| |||||||||||||||||||||||||||||||    ||||||||| ||||||||||||||||| ||||||||||    
T  22881647 ataatttagtgtaattacaagtgtcggtgtcggacacgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 22881568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 24334736 - 24334665
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||||||||||||||     |||||||||||| || |||||| ||||||||||    
T  24334736 ataattcagtgtaattacaagtgtcggtgtcggacacgt----cacgcctaatccaagtagtgtccgtgcttcata 24334665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 35919307 - 35919227
Alignment:
Q  209 ataattcagtgtaattacaagtgtc-----ggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||| |||||||      |||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  35919307 ataattcagtgtaattataagtgtccgtgtcgtgtcggacacgcgggacacgcctaatcggaggactgtccgtgcttcata 35919227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 13436486 - 13436561
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||| | |||| |||||||||||||  | ||||| |||||||||| |||||| ||||||||||    
T  13436486 ataattcagtgtaattatatgtgttggtgtcggacacgtagaacacgactaatccgagaagtgtccgtgcttcata 13436561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 19058887 - 19058850
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19058887 ataattcagtgtaattacaagtgtcggtgtcggacacg 19058850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 51410053 - 51410090
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  51410053 ataattcagtgtaattacaagtgtcggtgtcggacacg 51410090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 1486682 - 1486646
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  1486682 cgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 18337357 - 18337393
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||||||||||||||||||||||||||    
T  18337357 ataattcagtgtaattacaagtgtcggtgtcggacac 18337393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 46348417 - 46348377
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  46348417 catataatttagtgtaattacaagtgtcggtgtcggacacg 46348377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 46940824 - 46940749
Alignment:
Q  209 ataattcagtgtaattacaagtgtcg-gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||| ||||||||||||||| ||| ||||| ||||| ||| ||||||||||||||||||||||  ||||||||||    
T  46940824 ataattaagtgtaattacaagtttcgcgtgtccgacac-cggaacacgcctaatccgaggagtgttcgtgcttcata 46940749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 1815285 - 1815322
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  1815285 ataattcagtgtaattacaagtgtcggtgtccgacacg 1815322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 22515918 - 22515881
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||||||||||    
T  22515918 ataatttagtgtaattacaagtgtcggtgtcggacacg 22515881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 28273122 - 28273089
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtc 239  Q
    ||||||||||||||||||||||||||||||||||    
T  28273122 catataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 247
Target Start/End: Complemental strand, 31672925 - 31672888
Alignment:
Q  210 taattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  31672925 taattcagtgtaattacaagtctcggtgtcggacacgc 31672888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 38078692 - 38078655
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||| |||||||||||||||||||||||||||||    
T  38078692 ataattcaatgtaattacaagtgtcggtgtcggacacg 38078655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 40258964 - 40258927
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  40258964 ataattcagtgtaattacaagtgtcggtgtcagacacg 40258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 41877501 - 41877464
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||||||||||    
T  41877501 ataatttagtgtaattacaagtgtcggtgtcggacacg 41877464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 42359478 - 42359445
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggaca 244  Q
    ||||||||||||||||||||||||||||||||||    
T  42359478 aattcagtgtaattacaagtgtcggtgtcggaca 42359445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 47989589 - 47989626
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  47989589 cgggacacgcctaatccgaggagtgtccgtgcttcata 47989626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 37598913 - 37598949
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||| ||||||||||    
T  37598913 gggacacgcctaatccgaggagtgtccgtgcttcata 37598949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 42359427 - 42359391
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||||||||||||| |||||||||    
T  42359427 cgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 52903274 - 52903314
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  52903274 catataattcagtgtaattatatgtgtcggtgtcggacacg 52903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Complemental strand, 6612202 - 6612171
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  6612202 ataattcagtgtaattacaagtgtcggtgtcg 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 22947813 - 22947848
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||| ||||||||||    
T  22947813 ggacacgcctaatccgaggagtgtccgtgcttcata 22947848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Complemental strand, 24577217 - 24577186
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  24577217 ataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 25452179 - 25452108
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||||||||||||   ||||||||||| ||||| ||| ||||||||||| |||| |||||| |||||||||    
T  25452179 ataattcagtgtaattat--gtgtcggtgtcagacac-cggaacacgcctaattcgagcagtgtccgtgcttcat 25452108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 246
Target Start/End: Original strand, 37598861 - 37598896
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||| ||||||||||||||||||||    
T  37598861 aattcagtgtaattataagtgtcggtgtcggacacg 37598896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 42325623 - 42325677
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||| ||||||||||  |||||||| |||||| ||||||||||||||||||||||    
T  42325623 gtgtcagtgtcggacat-cgggacacacctaattcgaggagtgtctgtgcttcata 42325677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 47989525 - 47989556
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  47989525 ataattcagtgtaattacaagtgtcggtgtcg 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 16297257 - 16297223
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||||||||||| |||||||||    
T  16297257 ggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 21366027 - 21365993
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||| ||||||||||    
T  21366027 gacacgcctaatccgaggagtgtccgtgcttcata 21365993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 22515862 - 22515828
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||| ||||||||||    
T  22515862 gacacgcctaatccgaggagtgtccgtgcttcata 22515828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 28663636 - 28663715
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg----gacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||  |||||||||||||||||||||||    || |  | | ||||||||||| ||||||||||||||||||||||    
T  28663636 ataattctatgtaattacaagtgtcggtgtcgtatcgatatccagaacacgcctaattcgaggagtgtctgtgcttcata 28663715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 5376500 - 5376448
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||| ||||||||||||   ||||  ||||||||||||||||||||||||||||    
T  5376500 gtgtcgatgtcggacacgc---acacatctaatccgaggagtgtctgtgcttcata 5376448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 9828136 - 9828173
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  9828136 cgggacacgtctaatccgaggagtgtccgtgcttcata 9828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 16812637 - 16812674
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  16812637 cgggacacgcctaatctgaggagtgtccgtgcttcata 16812674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 238
Target Start/End: Original strand, 21378606 - 21378635
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgt 238  Q
    ||||||||||||||||||||||||||||||    
T  21378606 ataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 21620983 - 21621020
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  21620983 ataattcagtgtatttacaagcgtcggtgtcggacacg 21621020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 27965978 - 27965941
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||||  |||||||||    
T  27965978 cgggacacgcctaatccgaggagtgtccatgcttcata 27965941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 34741927 - 34741964
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  34741927 cgggacacgcctaatccgaagagtgtccgtgcttcata 34741964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 40917841 - 40917878
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  40917841 cgggacacgcctaatccgaggactgtccgtgcttcata 40917878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 45534167 - 45534130
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcataa 285  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  45534167 gggacacgccttatccgaggagtgtttgtgcttcataa 45534130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 2288198 - 2288126
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| ||||||||   |||||||||||||||||  | | ||||||||||||||||| |||| ||||||||||    
T  2288198 ataattcaatgtaattat--gtgtcggtgtcggacacctgag-cacgcctaatccgaggaatgtcagtgcttcata 2288126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 15765840 - 15765876
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  15765840 gggacacgcctaatccgaagagtgtccgtgcttcata 15765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 18190139 - 18190103
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||||||||||||||| |||| |||||    
T  18190139 ataattcagtgtaattacaagtgtcgatgtcagacac 18190103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 18556422 - 18556386
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  18556422 gggacacgcctaatccgagaagtgtccgtgcttcata 18556386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 30749868 - 30749904
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||| | |||||||||||||||||    
T  30749868 ataattcagtgtaattatatgtgtcggtgtcggacac 30749904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 30771319 - 30771355
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||| | |||||||||||||||||    
T  30771319 ataattcagtgtaattatatgtgtcggtgtcggacac 30771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 36878548 - 36878584
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  36878548 gggacacgcctaatcccaggagtgtccgtgcttcata 36878584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 40258909 - 40258873
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataa 285  Q
    |||||||||||||||||||||||||  ||||||||||    
T  40258909 ggacacgcctaatccgaggagtgtccatgcttcataa 40258873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 7938141 - 7938218
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||| |||||||||| ||||||||||||| ||||| || ||||||||| |||||||||||||| ||||||||||    
T  7938141 catataatttagtgtaattataagtgtcggtgtccgacac-cgagacacgcctgatccgaggagtgtccgtgcttcata 7938218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 21924966 - 21924902
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtct 274  Q
    ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  21924966 ataattcagtgtaattatatgtgtcggtgtcggacac-cgggacacgcctaatccgaggagcgtct 21924902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 9911559 - 9911495
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg-gacacgcgggacacgcctaatccgaggagtgt 272  Q
    |||||||||||||||||||||||||||||||| | ||  | ||||||||||||||||||||||||    
T  9911559 ataattcagtgtaattacaagtgtcggtgtcgtgtcaaccaggacacgcctaatccgaggagtgt 9911495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 208 - 246
Target Start/End: Complemental strand, 16388249 - 16388211
Alignment:
Q  208 tataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16388249 tataattcagtgtaattacaagtgtcggtgtcggacacg 16388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 28152126 - 28152163
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28152126 ataattcagtgtaattacaagtgtcggtgtcggacacg 28152163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 28715323 - 28715360
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28715323 ataattcagtgtaattacaagtgtcggtgtcggacacg 28715360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 34595162 - 34595199
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34595162 ataattcagtgtaattacaagtgtcggtgtcggacacg 34595199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 7977861 - 7977825
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||||||||||||||||||||||||||    
T  7977861 ataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Complemental strand, 9025525 - 9025448
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg-----gacacgcgggacacgcctaatccgaggagtgtctgtgcttca 282  Q
    ||||||||||||||||| | ||||||||||||     ||||| |||||||||||||||||||| |||||| ||||||||    
T  9025525 ataattcagtgtaattatatgtgtcggtgtcgtgtccgacac-cgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 6898312 - 6898275
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||||||||||    
T  6898312 ataattaagtgtaattacaagtgtcggtgtcggacacg 6898275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 8805574 - 8805525
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||| |||||| |||||| ||||||||||||||||||| ||||||||||    
T  8805574 gtgtcagacacgtgggacatgcctaatccgaggagtgtccgtgcttcata 8805525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 26402711 - 26402674
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  26402711 ataattcagtgtaatcacaagtgtcggtgtcggacacg 26402674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 31959187 - 31959269
Alignment:
Q  209 ataattcagtgtaattacaagtgtcgg-------tgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataa 285  Q
    ||||| |||||||||||||||||||||       |||| ||||| |||||||| |||||||||||||||||| |||||||||||    
T  31959187 ataatgcagtgtaattacaagtgtcggcgacatgtgtccgacac-cgggacacacctaatccgaggagtgtccgtgcttcataa 31959269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 32839609 - 32839572
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||| |||||||||||||||||    
T  32839609 cgggacacgcctaatccgagaagtgtctgtgcttcata 32839572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 32978930 - 32978893
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||||||||||    
T  32978930 ataattaagtgtaattacaagtgtcggtgtcggacacg 32978893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 1700384 - 1700455
Alignment:
Q  213 ttcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataa 285  Q
    ||||||||||||| ||||||||||||||||||| | | | ||||||||| | ||||||||| ||| |||||||    
T  1700384 ttcagtgtaattataagtgtcggtgtcggacac-cagaatacgcctaattcaaggagtgtccgtgtttcataa 1700455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 17327627 - 17327591
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||| ||||||||||    
T  17327627 gggacacgcctaatccgaggagtgtccgtgcttcata 17327591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 17341657 - 17341621
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataa 285  Q
    |||||||||||||||||||||||| ||||||||||||    
T  17341657 ggacacgcctaatccgaggagtgtttgtgcttcataa 17341621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 26178656 - 26178620
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||||||||||| ||||||||||||||||||||    
T  26178656 cgggacacgcctaatcggaggagtgtctgtgcttcat 26178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 3209482 - 3209517
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||| |||||||||||    
T  3209482 ggacacgcctaatccgaggagtgtttgtgcttcata 3209517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 4878025 - 4878060
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||| ||||||||||    
T  4878025 ggacacgcctaatccgaggagtgtccgtgcttcata 4878060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 246
Target Start/End: Complemental strand, 8777002 - 8776967
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||| |||||||||||||    
T  8777002 aattcagtgtaattacaagtgttggtgtcggacacg 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Complemental strand, 10770705 - 10770674
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  10770705 ataattcagtgtaattacaagtgtcggtgtcg 10770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 16766725 - 16766756
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  16766725 ataattcagtgtaattacaagtgtcggtgtcg 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 23771604 - 23771643
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  23771604 atatacttcagtgtaattacaaatgtcggtgtcggacacg 23771643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 426545 - 426507
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  426545 ataattaaatgtaattacaagtgtcggtgtcggacacgc 426507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 17841564 - 17841530
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||| ||||||||||    
T  17841564 gacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 286
Target Start/End: Complemental strand, 27903999 - 27903961
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcataag 286  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  27903999 gggacacacctaatccgaggagtgtctgtgattcataag 27903961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 285
Target Start/End: Original strand, 31385011 - 31385049
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataa 285  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  31385011 cgggacacgcctaatccaaggagtgtccgtgcttcataa 31385049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 403895 - 403858
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  403895 ataatttagtgtaactacaagtgtcggtgtcggacacg 403858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 4877971 - 4878008
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  4877971 ataattaagtataattacaagtgtcggtgtcggacacg 4878008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 284
Target Start/End: Complemental strand, 7723233 - 7723200
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||| ||||||||||    
T  7723233 acacgcctaatccgaggagtgtccgtgcttcata 7723200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 8389459 - 8389411
Alignment:
Q  233 cggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttca 282  Q
    ||||||| ||||| |||||||| |||||||||||||||||| ||||||||    
T  8389459 cggtgtccgacac-cgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 8714072 - 8714109
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  8714072 cgggacacgcccaatccgaggagtgtctttgcttcata 8714109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 240
Target Start/End: Complemental strand, 9107399 - 9107370
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||    
T  9107399 aattcagtgtaattacaagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 238
Target Start/End: Original strand, 9522919 - 9522948
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgt 238  Q
    ||||||||||||||||||||||||||||||    
T  9522919 ataattcagtgtaattacaagtgtcggtgt 9522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 17841620 - 17841583
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  17841620 ataatttagtgtaattacaagtgacggtgtcggacacg 17841583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 27904067 - 27904030
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  27904067 ataattcagtgtaattacaaatgtcggtgtcagacacg 27904030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 34197137 - 34197170
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||| ||||||||||||||    
T  34197137 atataattcagtgtaattataagtgtcggtgtcg 34197170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 34595215 - 34595252
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  34595215 cgggacacacctaatccgaggagtgtccgtgcttcata 34595252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 7265624 - 7265588
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||| | |||||||||||||||||    
T  7265624 ataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 7801187 - 7801155
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcgg 241  Q
    ||||||||| |||||||||||||||||||||||    
T  7801187 ataattcagcgtaattacaagtgtcggtgtcgg 7801155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 8365485 - 8365449
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||| || ||||||||||    
T  8365485 gggacacgcctaatccgaggagtctccgtgcttcata 8365449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 10339091 - 10339055
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  10339091 gggacacgcctaatcggaggagtgtccgtgcttcata 10339055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 30094066 - 30094131
Alignment:
Q  218 tgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||| ||||    
T  30094066 tgtaattacaagtgtcggtgtcggacac-cgggacacgcctaatccgaagagtgtccgtgctacata 30094131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 30298975 - 30299047
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||||||||  |   ||||||||| ||||||||||||||||| ||||||||||    
T  30298975 ataattcagtgtaattacaagtgtcggtgtcgtgc---cgggacacgtctaatccgaggagtgtccgtgcttcata 30299047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 30327843 - 30327915
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||||||||  |   ||||||||| ||||||||||||||||| ||||||||||    
T  30327843 ataattcagtgtaattacaagtgtcggtgtcgtgc---cgggacacgtctaatccgaggagtgtccgtgcttcata 30327915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 6879496 - 6879435
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagt 270  Q
    |||||| ||||||||||||||||||||||||||||||||   |||||||||||| |||||||    
T  6879496 ataattaagtgtaattacaagtgtcggtgtcggacacgcataacacgcctaatctgaggagt 6879435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 42640557 - 42640642
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg----------cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||||||||||||||          | |||||||||||||||||||||| || ||||||||||    
T  42640557 ataattcagtgtaattacaagtgtcggtgtcggacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcata 42640642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 12797369 - 12797332
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12797369 ataattcagtgtaattacaagtgtcggtgtcggacacg 12797332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 16073422 - 16073459
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16073422 ataattcagtgtaattacaagtgtcggtgtcggacacg 16073459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 17425420 - 17425348
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||   ||||| ||||| |||||  || ||||||||||||||||||||||||||||||||||    
T  17425420 ataattcagtgtaattat--gtgtctgtgtcagacacaagg-acacgcctaatccgaggagtgtctgtgcttcata 17425348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 244
Target Start/End: Original strand, 21945531 - 21945566
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggaca 244  Q
    ||||||||||||||||||||||||||||||||||||    
T  21945531 ataattcagtgtaattacaagtgtcggtgtcggaca 21945566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 5775342 - 5775305
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  5775342 cgggacacgcctaatccgaggagtgtccgtgcttcata 5775305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 23292964 - 23292927
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  23292964 cgggacacgcctaatccgaggagtgtccgtgcttcata 23292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 23293017 - 23292980
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||| |||||||||||||||||||||||||||    
T  23293017 ataattcagtataattacaagtgtcggtgtcggacacg 23292980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 28000776 - 28000743
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtc 239  Q
    ||||||||||||||||||||||||||||||||||    
T  28000776 catataattcagtgtaattacaagtgtcggtgtc 28000743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 28964279 - 28964242
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  28964279 ataattcagtgtaattacaagtgtctgtgtcggacacg 28964242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 29205472 - 29205509
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||||||| |||||||    
T  29205472 ataattcagtgtaattacaagtgtcggtgttggacacg 29205509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 49431054 - 49431091
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  49431054 ataattcagtgtaattaaaagtgtcggtgtcggacacg 49431091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 54580054 - 54580017
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  54580054 ataattcagtgtaattataagtgtcggtgtcggacacg 54580017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 715582 - 715546
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||| ||||||||||    
T  715582 gggacacgcctaatccgaggagtgtccgtgcttcata 715546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 752908 - 752872
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||| ||||||||||    
T  752908 gggacacgcctaatccgaggagtgtccgtgcttcata 752872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 16184913 - 16184949
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||| |||||||||||    
T  16184913 gggacacgcctaatccgaggagtgtttgtgcttcata 16184949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 4383449 - 4383484
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||| ||||||||||    
T  4383449 ggacacgcctaatccgaggagtgtccgtgcttcata 4383484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 3064903 - 3064869
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||| ||||||||||    
T  3064903 gacacgcctaatccgaggagtgtccgtgcttcata 3064869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 283
Target Start/End: Complemental strand, 22440631 - 22440559
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||| | ||| | ||||| |||||   ||||||||||||||||||||||||| |||||||||    
T  22440631 ataattcagtgtaattatatgtgac-gtgtccgacac-taggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 282
Target Start/End: Original strand, 28084606 - 28084640
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttca 282  Q
    |||||||||||||||||||||||||| ||||||||    
T  28084606 gggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 246
Target Start/End: Complemental strand, 34306828 - 34306798
Alignment:
Q  216 agtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||||||||    
T  34306828 agtgtaattacaagtgtcggtgtcggacacg 34306798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 482269 - 482232
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| || |||||||||||||||||    
T  482269 ataattcagtgtaattataactgtcggtgtcggacacg 482232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 2362006 - 2361969
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  2362006 ataatttagtgtaattaaaagtgtcggtgtcggacacg 2361969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 4157177 - 4157214
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  4157177 ataatttagtgcaattacaagtgtcggtgtcggacacg 4157214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 4157464 - 4157501
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  4157464 ataatttagtgcaattacaagtgtcggtgtcggacacg 4157501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 8423749 - 8423712
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| || |||||||||||||||||    
T  8423749 ataattcagtgtaattataaatgtcggtgtcggacacg 8423712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 11596335 - 11596298
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  11596335 cgggacacgcctaatctgaggagtgtccgtgcttcata 11596298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 12895252 - 12895215
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  12895252 cgggacacgcctaatccgaggagtgttcgtgcttcata 12895215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 16303299 - 16303266
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcg 240  Q
    |||||||| |||||||||||||||||||||||||    
T  16303299 atataatttagtgtaattacaagtgtcggtgtcg 16303266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 28470446 - 28470483
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  28470446 cgggacatgcctaatccgaggagtgtccgtgcttcata 28470483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 36635411 - 36635448
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  36635411 cgggacacgcctaatccgaagagtgtccgtgcttcata 36635448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 40784034 - 40784071
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  40784034 cgggacacacctaatccgaggagtgtccgtgcttcata 40784071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 53381568 - 53381531
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  53381568 cgggacacacctaatccgaggagtgtccgtgcttcata 53381531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 3947737 - 3947701
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataa 285  Q
    |||||| |||||||||||||||||| |||||||||||    
T  3947737 ggacacacctaatccgaggagtgtccgtgcttcataa 3947701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 5922568 - 5922532
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  5922568 gggacacgcctaatctgaggagtgtctctgcttcata 5922532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 284
Target Start/End: Complemental strand, 10499301 - 10499228
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||| |||||||||| | ||||| ||||||||| ||    |||||||||||||||||| |||| ||||||||||    
T  10499301 ataatttagtgtaattatatgtgtcagtgtcggacccgac--acacgcctaatccgaggattgtccgtgcttcata 10499228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 14126099 - 14126063
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataa 285  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  14126099 ggacacgcctaatccgaagagtgtatgtgcttcataa 14126063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 20633510 - 20633589
Alignment:
Q  209 ataattcagtgtaattacaagtgtcg-----gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||||||||||||     ||||||||||| |  |||||||||||||| ||||||||  ||||||||||    
T  20633510 ataattcaatgtaattacaagtgtcgtgtcggtgtcggacac-caagacacgcctaatccaaggagtgttcgtgcttcata 20633589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 28964225 - 28964189
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||  |||||||||    
T  28964225 gggacacgcctaatccgaggagtgtccatgcttcata 28964189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 29205550 - 29205586
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||  ||||||||||    
T  29205550 gggacacgcctaatccgaggagtgttcgtgcttcata 29205586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 38847046 - 38847010
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcgga 242  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  38847046 catattattcagtgtaattacaagtgtcagtgtcgga 38847010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 25566869 - 25566948
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||||||||     |    ||||||||||||||||||||||||||||||||||||||    
T  25566869 ataattcagtgtaattacaagtgtcggtgtcgtgttggtgtccgggacacgcctaatccgaggagtgtctgtgcttcata 25566948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 4948680 - 4948753
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||||||||||||  || |||||||||||||  | ||||||  ||||||||||    
T  4948680 ataattcagtgtaattacaagtgtcggtgtcggaca--cgagacacgcctaatcgaatgagtgtacgtgcttcata 4948753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 31514901 - 31514972
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||| |||| ||||||||| ||||| |||||||    ||||||||||||||||||||||| ||||||||||    
T  31514901 ataattcagcgtaactacaagtgttggtgttggacacg----acacgcctaatccgaggagtgtccgtgcttcata 31514972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 13436964 - 13436911
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  13436964 gtgtcggtgtcg-acac-cgggacacgcctaatccaaggagtgtctgtgcttcata 13436911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 24613548 - 24613587
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcg 248  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  24613548 ataattaagtgtaattacaagtgtcggtgtcggacacgcg 24613587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 24669461 - 24669535
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||||||||| |||  | ||||| ||||||||||| ||| |||  |||||||||    
T  24669461 ataattcagtgtaattacaagtgtcggtgtcgaaca-tcaggacatgcctaatccgatgagcgtccatgcttcata 24669535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 36450730 - 36450695
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||||||||||||    
T  36450730 ggacacgcctaatccgaggagtgtctgtgcttcata 36450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 8343000 - 8343085
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg----------cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||| ||||||||||||||||||||||||| ||| |          ||||||||||||||||||| ||||||||||||||||||    
T  8343000 ataatttagtgtaattacaagtgtcggtgtcgtacatgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcata 8343085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 8343408 - 8343445
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  8343408 cgggacacgcctaatccgaagagtgtctgtgcttcata 8343445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 284
Target Start/End: Original strand, 11833935 - 11833968
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||||||||||    
T  11833935 acacgcctaatccgaggagtgtctgtgcttcata 11833968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 16641947 - 16641910
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||||||||||||||||||||||||    
T  16641947 cgggacacacctaatccgaggagtgtctgtgcttcata 16641910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 20873097 - 20873134
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||||||||||    
T  20873097 ataatttagtgtaattacaagtgtcggtgtcggacacg 20873134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 30271286 - 30271249
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  30271286 ataatgcagtgtaattacaagtgtcggtgtcggacacg 30271249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 40332219 - 40332256
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||||||| |||||||    
T  40332219 ataattcagtgtaattacaagtgtcggtgtgggacacg 40332256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 17468503 - 17468457
Alignment:
Q  229 gtgtcggtgtcggacacgcggg--acacgcctaatccgaggagtgtc 273  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  17468503 gtgtcggtgtcggacacgagggggacacgcctaatccgaggagtgtc 17468457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 22204667 - 22204706
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  22204667 atataattcagtgtaattacaagtgtcagtgtcagacacg 22204706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 246
Target Start/End: Complemental strand, 36450783 - 36450748
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||| |||||||||||||    
T  36450783 aattcagtgtaattacaagtgtaggtgtcggacacg 36450748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 242
Target Start/End: Complemental strand, 15023289 - 15023255
Alignment:
Q  208 tataattcagtgtaattacaagtgtcggtgtcgga 242  Q
    ||||||||||||||||||||||||||| |||||||    
T  15023289 tataattcagtgtaattacaagtgtcgatgtcgga 15023255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 18964274 - 18964308
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||| |||||||||||||||||||||||||    
T  18964274 gacacgccttatccgaggagtgtctgtgcttcata 18964308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 22596022 - 22596056
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggac 243  Q
    |||||||||||||||||||||||| ||||||||||    
T  22596022 ataattcagtgtaattacaagtgttggtgtcggac 22596056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 30077418 - 30077380
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  30077418 ataattcagtgtaattacaagtgtccgtgtcggatacgc 30077380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 284
Target Start/End: Complemental strand, 4673388 - 4673355
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||| ||||||||||||||||||||    
T  4673388 acacgcctaatccaaggagtgtctgtgcttcata 4673355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 15816096 - 15816059
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  15816096 cgggacacgcctaatccgagaagtgtccgtgcttcata 15816059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 17751737 - 17751774
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  17751737 cgggacacgcctaatccgaggagtgtccgcgcttcata 17751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 17760724 - 17760761
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  17760724 cgggacacgcctaatccgaggagtgtccgcgcttcata 17760761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 18407747 - 18407784
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||| || ||||||||    
T  18407747 ataattcagtgtaattacaagtgtcgctgccggacacg 18407784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 22652068 - 22652105
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  22652068 cgggacacgtctaatccgaggagtgtccgtgcttcata 22652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 24858097 - 24858134
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  24858097 cgggacacgcctaatcagaggagtgtttgtgcttcata 24858134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 29510271 - 29510234
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  29510271 cgggacacacctaatccgaggagtgtccgtgcttcata 29510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 31557024 - 31557061
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  31557024 ataattcagtgtaattacaagtttcggtgtcagacacg 31557061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 39820509 - 39820546
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  39820509 cgggacacgcctaatccgagaagtgtccgtgcttcata 39820546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 16987994 - 16988030
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||| |||||||||||||||||| |||||||||    
T  16987994 cgggacacccctaatccgaggagtgtccgtgcttcat 16988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 29447075 - 29447039
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcataa 285  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  29447075 ggacacgcctaatcctaggagtgtccgtgcttcataa 29447039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 31109495 - 31109463
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgctt 280  Q
    |||||||||||||||||||||||||| ||||||    
T  31109495 gggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 123656 - 123733
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcataag 286  Q
    |||||||||||||||||||||||||||||||  |    | |||||||||||||||||||||| ||| |||||||||||    
T  123656 ataattcagtgtaattacaagtgtcggtgtcttaacatcaggacacgcctaatccgaggagtatctatgcttcataag 123733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 92893 - 92940
Alignment:
Q  236 tgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||| | ||||||||||||||||||||||||| ||||||||||    
T  92893 tgtcggacac-ctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 284
Target Start/End: Complemental strand, 20539708 - 20539633
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||| |||||||||||||||||||||||||     ||| ||||||||| |||||||||||||| ||||||||||    
T  20539708 catataatttagtgtaattacaagtgtcggtgtcg---tggcgagacacgcctgatccgaggagtgtccgtgcttcata 20539633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 19536428 - 19536390
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19536428 ataattcagtgtaattacaagtgtcggtgtcggacacgc 19536390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 20473347 - 20473428
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg--cgggacacgcctaatccgaggagtgtctgtgcttcataa 285  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||| |||| | ||| | || ||||||| |||||||||||    
T  20473347 catataattcagtgtaattacaagtgtcgatgtcggacacggccggaacacacttaacctgaagagtgtccgtgcttcataa 20473428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 42832303 - 42832234
Alignment:
Q  213 ttcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||| ||||||||||||| ||| | ||||||||||||||||| |||||||||  ||||||||    
T  42832303 ttcagtgtaattataagtgtcggtgtccgactc-cgggacacgcctaatccaaggagtgtccttgcttcat 42832234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 2438750 - 2438713
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2438750 ataattcagtgtaattacaagtgtcggtgtcggacacg 2438713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 21624295 - 21624332
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21624295 ataattcagtgtaattacaagtgtcggtgtcggacacg 21624332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 246
Target Start/End: Original strand, 15972903 - 15972938
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||    
T  15972903 aattcagtgtaattacaagtgtcggtgtcggacacg 15972938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 5040762 - 5040799
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||| |||||||||||||||||||||||||||||    
T  5040762 ataattcaatgtaattacaagtgtcggtgtcggacacg 5040799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 22084794 - 22084757
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  22084794 cgggacacgcctaatccgatgagtgtctgtgcttcata 22084757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 27460064 - 27460101
Alignment:
Q  208 tataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||||||||||| |||||||||||||||    
T  27460064 tataattcagtgtaattacaagggtcggtgtcggacac 27460101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 30404881 - 30404844
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  30404881 ataattcagtgtaattacaagtgtcggcgtcggacacg 30404844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 34691839 - 34691798
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  34691839 catataattcagtgtaattatatgtgtcggtgtcggacacgc 34691798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 247
Target Start/End: Complemental strand, 34714251 - 34714210
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    |||||||||||||||||||| | |||||||||||||||||||    
T  34714251 catataattcagtgtaattatatgtgtcggtgtcggacacgc 34714210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 37419835 - 37419872
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  37419835 cgggacacgcctaatccgaggagtgtccgtgcttcata 37419872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 2438697 - 2438661
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||||||||||||| |||||||||    
T  2438697 cgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 5473376 - 5473435
Alignment:
Q  229 gtgtcggtgtcggacacg--cgggacacgcctaatccgaggagtgtctgtgcttcataag 286  Q
    ||||||||||||||||||  ||||||||  ||||||||||||||||||  ||||||||||    
T  5473376 gtgtcggtgtcggacacgagcgggacacctctaatccgaggagtgtcttagcttcataag 5473435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 18421991 - 18422027
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18421991 ataattcagtgtaattacaagtgtcggtgtcgaacac 18422027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 26769604 - 26769640
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||| ||||||||||    
T  26769604 gggacacgcctaatccgaggagtgtccgtgcttcata 26769640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 284
Target Start/End: Original strand, 44635527 - 44635611
Alignment:
Q  210 taattcagtgtaattacaa------gtgtcggtgtcggacacg----cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||      ||||||||||||||||||    || ||||||||||||| |||||||||| ||||||||||    
T  44635527 taattcagtgtaattacaagtgtcggtgtcggtgtcggacacgacaccgagacacgcctaatctgaggagtgtccgtgcttcata 44635611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 239
Target Start/End: Complemental strand, 11223894 - 11223864
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtc 239  Q
    |||||||||||||||||||||||||||||||    
T  11223894 ataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 18420398 - 18420364
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||| |||||||||||||||||    
T  18420398 gacacgcctaatccgagaagtgtctgtgcttcata 18420364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 284
Target Start/End: Complemental strand, 34221502 - 34221464
Alignment:
Q  246 gcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  34221502 gcgggacacgcctaatccgaggagtttccgtgcttcata 34221464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 37559005 - 37559039
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggac 243  Q
    |||||||| ||||||||||||||||||||||||||    
T  37559005 ataattcaatgtaattacaagtgtcggtgtcggac 37559039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 4882729 - 4882696
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcg 240  Q
    |||||||||||||||||||||||||||| |||||    
T  4882729 atataattcagtgtaattacaagtgtcgatgtcg 4882696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 5367220 - 5367257
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  5367220 ataattcagtgtaattatatgtgtcggtgtcggacacg 5367257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 11223831 - 11223794
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  11223831 cgggacacgcctaatctgaggagtgtccgtgcttcata 11223794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 12224251 - 12224288
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||| || |||||||||||||||||||||||||||||    
T  12224251 ataatccaatgtaattacaagtgtcggtgtcggacacg 12224288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 12748737 - 12748785
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||| ||||||| |||||||  |||||||||||||||||||||    
T  12748737 gtgtcggacac-cgggacatgcctaatttgaggagtgtctgtgcttcata 12748785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 14996257 - 14996224
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtc 239  Q
    ||||||||| ||||||||||||||||||||||||    
T  14996257 catataatttagtgtaattacaagtgtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 18840991 - 18840954
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  18840991 cgggacacacctaatccgaggagtgtccgtgcttcata 18840954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 18841044 - 18841007
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  18841044 ataattaagtgtaattacaagtgtcggtgtcagacacg 18841007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 23354619 - 23354582
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  23354619 cgggacacgcctaatccgaggagtgtccgtggttcata 23354582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 28596497 - 28596534
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  28596497 ataagtcagtgtaattataagtgtcggtgtcggacacg 28596534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 33884082 - 33884115
Alignment:
Q  212 attcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||||||||||||||| ||||    
T  33884082 attcagtgtaattacaagtgtcggtgtcgaacac 33884115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 38117137 - 38117100
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  38117137 cgggacacgcctaatccgaggggtgtccgtgcttcata 38117100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 41843516 - 41843564
Alignment:
Q  235 gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||| |||||| ||||||||| | |||||||||||||||||||||||||    
T  41843516 gtgtccgacacg-gggacacgctttatccgaggagtgtctgtgcttcata 41843564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 43586036 - 43585999
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  43586036 ataattcaatgtaatcacaagtgtcggtgtcggacacg 43585999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 240
Target Start/End: Original strand, 974778 - 974806
Alignment:
Q  212 attcagtgtaattacaagtgtcggtgtcg 240  Q
    |||||||||||||||||||||||||||||    
T  974778 attcagtgtaattacaagtgtcggtgtcg 974806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 3444863 - 3444827
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  3444863 gggacatgcctaatccgaggagtgtccgtgcttcata 3444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 19942346 - 19942382
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||||||||||||||||||||||  ||||||||    
T  19942346 cgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 20242758 - 20242722
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||| | |||||||||||||||||    
T  20242758 ataattcagtgtaattatatgtgtcggtgtcggacac 20242722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 23354962 - 23354926
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||||||||||||||||||||||  ||||||||    
T  23354962 cgggacacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 34784948 - 34784912
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||| || ||||||||||||||||||||||    
T  34784948 gggacacgccttattcgaggagtgtctgtgcttcata 34784912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 285
Target Start/End: Original strand, 35449600 - 35449628
Alignment:
Q  257 ctaatccgaggagtgtctgtgcttcataa 285  Q
    |||||||||||||||||||||||||||||    
T  35449600 ctaatccgaggagtgtctgtgcttcataa 35449628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 283
Target Start/End: Complemental strand, 36756307 - 36756275
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||| |||||||||||||||||||    
T  36756307 acacgcctaatcctaggagtgtctgtgcttcat 36756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 42511359 - 42511323
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  42511359 gggacacggctaatccgaggagtgtccgtgcttcata 42511323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 45561 - 45524
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45561 ataattcagtgtaattacaagtgtcggtgtcggacacg 45524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 25775537 - 25775574
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25775537 ataattcagtgtaattacaagtgtcggtgtcggacacg 25775574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 8383282 - 8383322
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  8383282 catataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 13414497 - 13414571
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| |||||||| | |||||||||||||||||  ||||||||||| ||||||| ||||||| | |||||||    
T  13414497 ataattcaatgtaattatatgtgtcggtgtcggacac-agggacacgccttatccgagaagtgtctatacttcata 13414571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 10954980 - 10955017
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  10954980 ataattcagtgtaatcacaagtgtcggtgtcggacacg 10955017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 284
Target Start/End: Original strand, 11252061 - 11252094
Alignment:
Q  251 acacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||||||||||    
T  11252061 acacgcctaatccgaggagtgtctgtgcttcata 11252094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 16000047 - 16000010
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||| |||||||||||||||||||||||    
T  16000047 ataattcagtgtaactacaagtgtcggtgtcggacacg 16000010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 20503493 - 20503530
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||||||| |||||||    
T  20503493 ataattcagtgtaattacaagtgtcggtgttggacacg 20503530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 20503546 - 20503583
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  20503546 cgggacacgcctaatccgaggagtgtccgtgcttcata 20503583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 34185090 - 34185053
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  34185090 cgggacacgcctaatccgaggagtgtccgtgcttcata 34185053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 40150604 - 40150527
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcggacacgcgg-gacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    |||||||||| |||||| | | ||||||||||| |||| |||  ||||| |||||||||||||||||| |||||||||    
T  40150604 atataattcaatgtaatcatatgtgtcggtgtctgacatgcgtcgacacacctaatccgaggagtgtccgtgcttcat 40150527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 55401103 - 55401140
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||| |||||||||||||||||||||||||||||||    
T  55401103 ataatttagtgtaattacaagtgtcggtgtcggacacg 55401140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 7171526 - 7171566
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  7171526 catataattcggtgtaattacaagtgttggtgtcggacacg 7171566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 8789536 - 8789489
Alignment:
Q  236 tgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||| || |||||||||||||||||||||||| ||||||||||    
T  8789536 tgtcggacac-cgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 26492239 - 26492199
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  26492239 catacaattcagtgtaattacaagtatcggtgtcggacacg 26492199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 51206384 - 51206348
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    |||||||||||||| ||||||||||||||||||||||    
T  51206384 ataattcagtgtaaatacaagtgtcggtgtcggacac 51206348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 4990948 - 4990913
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||||||||| ||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgcttcata 4990913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 244
Target Start/End: Complemental strand, 8587052 - 8587017
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggaca 244  Q
    |||||| |||||||||||||||||||||||||||||    
T  8587052 ataattaagtgtaattacaagtgtcggtgtcggaca 8587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 244
Target Start/End: Original strand, 8593165 - 8593200
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggaca 244  Q
    |||||||||| |||||||||||||||||||||||||    
T  8593165 ataattcagtataattacaagtgtcggtgtcggaca 8593200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 284
Target Start/End: Original strand, 28812609 - 28812644
Alignment:
Q  249 ggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||||||| |||||    
T  28812609 ggacacgcctaatccgaggagtgtctgtgcctcata 28812644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 28918029 - 28918060
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  28918029 ataattcagtgtaattacaagtgtcggtgtcg 28918060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 7928478 - 7928516
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgc 247  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  7928478 ataattcagtgtaattatatgtgtcggtgtcggacacgc 7928516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 8842413 - 8842447
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||| ||||||||||    
T  8842413 gacacgcctaatccgaggagtgtccgtgcttcata 8842447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 11610549 - 11610627
Alignment:
Q  209 ataattcagtgtaattacaagtgtcg----gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||| |||||||||||     ||||| ||||  |||||||||||||||| |||||||||| ||||||||||    
T  11610549 ataattcagtgtagttacaagtgtcaagtcgtgtccgacat-cgggacacgcctaatctgaggagtgtccgtgcttcata 11610627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 240
Target Start/End: Original strand, 14216917 - 14216951
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcg 240  Q
    |||||||||||||||||||||||||||| ||||||    
T  14216917 catataattcagtgtaattacaagtgtccgtgtcg 14216951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 240
Target Start/End: Original strand, 14223046 - 14223080
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcg 240  Q
    |||||||||||||||||||||||||||| ||||||    
T  14223046 catataattcagtgtaattacaagtgtccgtgtcg 14223080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 245
Target Start/End: Complemental strand, 15505823 - 15505785
Alignment:
Q  207 atataattcagtgtaattacaagtgtcggtgtcggacac 245  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  15505823 atataattcagtgtaattataagtgttggtgtcggacac 15505785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 240
Target Start/End: Complemental strand, 15796328 - 15796294
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||| |||||||||||    
T  15796328 catataattcagtgtaattacaattgtcggtgtcg 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 40052370 - 40052430
Alignment:
Q  225 acaagtgtcg--gtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||  ||||| ||||| ||||||||||||||||||||||||||  ||||||||||    
T  40052370 acaagtgtcgacgtgtccgacac-cgggacacgcctaatccgaggagtgttcgtgcttcata 40052430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 55401159 - 55401193
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||| ||||||||||    
T  55401159 gacacgcctaatccgaggagtgtccgtgcttcata 55401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 3865702 - 3865739
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  3865702 ataattcagtataattacaagtgtcggtgtctgacacg 3865739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 10268517 - 10268457
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagt 270  Q
    |||||| |||||||||||||||||| ||||| ||||| ||| ||||||||| ||| ||||||    
T  10268517 ataatttagtgtaattacaagtgtcagtgtcagacac-cggaacacgcctagtcctaggagt 10268457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 14979230 - 14979267
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  14979230 cgggacacgcctaacccgaggagtgtccgtgcttcata 14979267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 21367330 - 21367382
Alignment:
Q  229 gtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttca 282  Q
    |||||||||||||||||  || |||| ||||||||||| |||||||||||||||    
T  21367330 gtgtcggtgtcggacacttgg-acacacctaatccgagaagtgtctgtgcttca 21367382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 27505332 - 27505369
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  27505332 cgggacatgcctaatccgaggagtgtccgtgcttcata 27505369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 240
Target Start/End: Complemental strand, 34185152 - 34185123
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||    
T  34185152 aattcagtgtaattacaagtgtcggtgtcg 34185123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 34910398 - 34910435
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  34910398 cgggacacgtctaatccgaggagtgtccgtgcttcata 34910435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 35994769 - 35994733
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  35994769 ataattcagtgtaattacaagtgtc-gtgtcggacacg 35994733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 40993313 - 40993276
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||||  |||||||||    
T  40993313 cgggacacgcctaatccgaggagtgtccatgcttcata 40993276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 40993366 - 40993329
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  40993366 ataattcagtgtaattatatgtgtcggtgtcggacacg 40993329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 4987258 - 4987222
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcat 283  Q
    ||||||||||||||||||||||||||| || ||||||    
T  4987258 cgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 284
Target Start/End: Original strand, 5339197 - 5339225
Alignment:
Q  256 cctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||||||    
T  5339197 cctaatccgaggagtgtctgtgcttcata 5339225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 17005653 - 17005621
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgt 238  Q
    |||||||||||||||||||| ||||||||||||    
T  17005653 catataattcagtgtaattataagtgtcggtgt 17005621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 21211376 - 21211412
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  21211376 gggacactcctaatccgaggagtgtttgtgcttcata 21211412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 26508138 - 26508166
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtg 237  Q
    |||||||||||||||||||||||||||||    
T  26508138 ataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 41961616 - 41961580
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  41961616 gggacacgcctaatccgagaagtgtccgtgcttcata 41961580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 246
Target Start/End: Complemental strand, 491 - 456
Alignment:
Q  211 aattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||||||||||||||||||||||    
T  491 aattcagtgtaattacaagtgtcggtgtcggacacg 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 440 - 402
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcataa 285  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  440 cgggacacacctaatccgaggagtgtccgtgcttcataa 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 70306 - 70343
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  70306 ataattcagtgtaattataagtgtcggtgtcggacacg 70343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 4858 - 4822
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||| ||||||||||    
T  4858 gggacacgcctaatccgaggagtgtccgtgcttcata 4822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 3390 - 3426
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||||||||| ||||||||||    
T  3390 gggacacgcctaatccgaggagtgtccgtgcttcata 3426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 8823 - 8863
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  8823 catattatttagtgtaattacaagtgtcggtgtcggacacg 8863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 284
Target Start/End: Original strand, 46710 - 46775
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||| |||||||||||          ||||||||||||||||||||||| ||||||||||    
T  46710 ataattcagtgtaattacaaatgtcggtgtcg----------acacgcctaatccgaggagtgtccgtgcttcata 46775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 240
Target Start/End: Original strand, 23798 - 23829
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcg 240  Q
    ||||||||||||||||||||||||||||||||    
T  23798 ataattcagtgtaattacaagtgtcggtgtcg 23829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 5011 - 4977
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||| ||||||||||||||||||||||||||||||    
T  5011 gacatgcctaatccgaggagtgtctgtgcttcata 4977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 5058 - 5030
Alignment:
Q  218 tgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||||||||||||||||||||||||    
T  5058 tgtaattacaagtgtcggtgtcggacacg 5030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 21372 - 21406
Alignment:
Q  250 gacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||||||||| |||||||||||||||||    
T  21372 gacacgcctaatccgagaagtgtctgtgcttcata 21406  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 63801 - 63853
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtgtcggacacgcgggacacgcctaatc 262  Q
    ||||||||||| ||||||||||||||||||| ||||| ||| |||| |||||||    
T  63801 ataattcagtgcaattacaagtgtcggtgtcagacac-cggaacacacctaatc 63853  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 71817 - 71854
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  71817 cgggacacgactaatccgaggagtgtcggtgcttcata 71854  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 236952 - 236915
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  236952 cgggacacacctaatctgaggagtgtctgtgcttcata 236915  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 284
Target Start/End: Original strand, 241686 - 241723
Alignment:
Q  247 cgggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  241686 cgggacacgcctaatccgagaagtgtccgtgcttcata 241723  T

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Target: scaffold0227 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 15053 - 15089
Alignment:
Q  248 gggacacgcctaatccgaggagtgtctgtgcttcata 284  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  15053 gggacacgccttatccgaggagtgtttgtgcttcata 15089  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 8035 - 8074
Alignment:
Q  206 catataattcagtgtaattacaagtgtcggtgtcggacacg 246  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  8035 catataatacagtgtaatta-aagtgtcggtgtcggacacg 8074  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 237
Target Start/End: Original strand, 130510 - 130538
Alignment:
Q  209 ataattcagtgtaattacaagtgtcggtg 237  Q
    |||||||||||||||||||||||||||||    
T  130510 ataattcagtgtaattacaagtgtcggtg 130538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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