View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0529_high_12 (Length: 411)
Name: NF0529_high_12
Description: NF0529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0529_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 27863384 - 27863119
Alignment:
| Q |
1 |
aggaggtggatgactagggtgcatgtaatacggtacttgaggtggctgcataggataaccaccaccatgattcatattcatatacccattattctccata |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27863384 |
aggaggtggatgactagggtgcatgtaatacggtacttgaggtggctgcataggataaccaccaccatgattcatattcatatacccattattctccata |
27863285 |
T |
|
| Q |
101 |
taatgttgattattatcataaccaccaccataaccagattgatgatgaaattgatccataccagcataattactactttgaccttcataataatacatcg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27863284 |
taatgttgattattatcataaccaccaccataaccagattgatgatgaaattgatccataccagcataattactactttgaccttcataataatacatcg |
27863185 |
T |
|
| Q |
201 |
gagcttgtatcggatactgatactccattttattaacctccaccttcgccgcatctccaccgtcca |
266 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27863184 |
gagcttgtatcggatactgatactccattttattaacctccaccttcgccgcatctccaccgtcca |
27863119 |
T |
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