View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0529_low_10 (Length: 513)
Name: NF0529_low_10
Description: NF0529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0529_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 96 - 513
Target Start/End: Complemental strand, 11480119 - 11479700
Alignment:
| Q |
96 |
agctgacacatcatgaacgataacatagcttgctataactattnnnnnnnntat--taagctatttctatataccatctgcatgcatgttttcccatcaa |
193 |
Q |
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| T |
11480119 |
agctgacacatcatgaacgataacatagcttgctataactattaaaaaaaatatattaagctatttctatataccatctgcatgcatgttttcccgtcaa |
11480020 |
T |
|
| Q |
194 |
tataacaaataaactgtaaatttcagatttcctacaagattctttctggtgtagatgcacactccacgacagtagcaatatttgagatgcttacaatcta |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11480019 |
tataacaaataaactgtaaatttcagatttcctacaagattctttctggtgtagatgcacactccacgacagtagcaatatttgagatgcttacaatcta |
11479920 |
T |
|
| Q |
294 |
caagtgggatgttaagttggtcttagccttagcagcatttgctttaaactatggtgaattctggcttcttgctcatattcacgatacgaaccaactcgca |
393 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11479919 |
caagtgggatgttaagttggtgttagccttagcagcatttgctttaaactatggcgaattctggcttcttgctcatattcacgatacgaaccaactcgca |
11479820 |
T |
|
| Q |
394 |
aaatcgatggcgattcttaagcagttacctggtatcatggagcattcaagctcactaaagccacgatttgatacgcttaatgatctagtaaatgtcatat |
493 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11479819 |
aaatcgatggcgattcttaagcagttacctggtatcatggagcattcaagctcactaaagccacgatttgatacgcttaatgatctagtaaatgtcatat |
11479720 |
T |
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| Q |
494 |
tggaagtgaccaaatgtgtc |
513 |
Q |
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| T |
11479719 |
tggaagtgaccaaatgtgtc |
11479700 |
T |
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