View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0529_low_80 (Length: 247)

Name: NF0529_low_80
Description: NF0529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0529_low_80
NF0529_low_80
[»] chr8 (1 HSPs)
chr8 (195-247)||(27838691-27838743)


Alignment Details
Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 27838743 - 27838691
Alignment:
195 acaacagcatcatctccatatccagcaccaccacctgcaccttcacctccccc 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
27838743 acaacagcatcatctccatatccagcaccaccacctgcaccttcacctccccc 27838691  T

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