View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0529_low_89 (Length: 231)
Name: NF0529_low_89
Description: NF0529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0529_low_89 |
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Alignment Details
Target: chr2 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 16309871 - 16309979
Alignment:
| Q |
19 |
tatgagtattgacgtggcaatatattaccggatacatgtataaaaaataattgtattaattaattaaatatgcgtcacaatatacatacatttggaatga |
118 |
Q |
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| T |
16309871 |
tatgagtattgacgtggcaatatattaccggatacatgtataaaaaataattgtattaattaattaaatatgcgtcacaatatacatacatttggaatga |
16309970 |
T |
|
| Q |
119 |
tattgaggt |
127 |
Q |
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||||||||| |
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| T |
16309971 |
tattgaggt |
16309979 |
T |
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