View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0532-Insertion-1 (Length: 600)
Name: NF0532-Insertion-1
Description: NF0532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0532-Insertion-1 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 569; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 569; E-Value: 0
Query Start/End: Original strand, 8 - 600
Target Start/End: Complemental strand, 32688741 - 32688150
Alignment:
| Q |
8 |
caattggacgcttagccaatttaattgttgagacagtaagttaacagttgcaatacctttactttcatctcctgcagcaatataatgtatcaactatcaa |
107 |
Q |
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| T |
32688741 |
caattggacgcttagccaatttaattgttgagacagcaagttaacagttgcaatacctttactttcatctcctgcagcaatataatgtatcaactatcaa |
32688642 |
T |
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| Q |
108 |
gccacaaggcatgcaaggcctcatagtcattgtaacaacatgctcgacctcactttacatttggccactgccataaactatttgtccgatgcccagagga |
207 |
Q |
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| T |
32688641 |
gccataaggcatgcaaggcctcatagtcattgtaacaacatgctcgacctcactttacatttggccaccaccataaactatttgtccgatgcccagagga |
32688542 |
T |
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| Q |
208 |
ttttcccacacacaaaagcattatctactgtgttttgctattactttcatgaccaccaccaatctgaatatagcaagcaaacttctgcatttttaggata |
307 |
Q |
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| T |
32688541 |
ttttcccacacacaaaagcattatctactgtgttttgctattactttcatgaccac-accaatctgaatatagcaagcaaacttctgcatttttaggata |
32688443 |
T |
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| Q |
308 |
tataattccaatgttggaagttcccttcttcacatattgaagtattctcttagccgccaacatatgagaatattcatggatctgctaatatgaccaacac |
407 |
Q |
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| T |
32688442 |
tataattccaatgttggaagttcccttcttcacatattgaagtattctcttagccgccaacatatgagaatattcatggatctgctaatatgaccaacac |
32688343 |
T |
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| Q |
408 |
tggtcatgaatgagatcatttatataattaattgcggtccagaagagttattggataattccattatctcaacccaaaacatatacaaaatataatctaa |
507 |
Q |
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| T |
32688342 |
tggtcatgaatgagatcatttatataattaattgcggtccagaagagttattggataattccattatctcaacccaaaacatatacaaaatataatctaa |
32688243 |
T |
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| Q |
508 |
tataactacagcaattaagtcaatgattttgtaccaaaccataatgaaaagatggaagagagaagttagttgctaaatcatttttgttcggtt |
600 |
Q |
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| T |
32688242 |
tataactacagcaattaagtcaatgattttgtaccaaaccataatgaaaagatggaagagagaagttagttgctaaatcatttttgttcggtt |
32688150 |
T |
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