View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0532-Insertion-8 (Length: 143)

Name: NF0532-Insertion-8
Description: NF0532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0532-Insertion-8
NF0532-Insertion-8
[»] chr6 (1 HSPs)
chr6 (43-143)||(1169974-1170074)


Alignment Details
Target: chr6 (Bit Score: 93; Significance: 1e-45; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 1169974 - 1170074
Alignment:
Q  43 tcctcgatctatctgtgttaatcaacatatgagtttaagtaagcaacaaaaactcttttttgaaggtaactcgcgacgtatctaaaccaaagacgtttta 142  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1169974 tcctcgatctgtctgtgttaatcaacatatgagtttaagtaagcaacaaaaactcttttttgaaggtaactcgcaacgtatctaaaccaaagacgtttta 1170073  T
Q  143 c 143  Q
    |    
T  1170074 c 1170074  T

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