View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0532_high_4 (Length: 587)

Name: NF0532_high_4
Description: NF0532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0532_high_4
NF0532_high_4
[»] chr4 (49 HSPs)
chr4 (30-583)||(2812710-2813263)
chr4 (489-583)||(16408601-16408694)
chr4 (490-585)||(20225119-20225213)
chr4 (489-583)||(23501831-23501924)
chr4 (489-583)||(11054148-11054239)
chr4 (489-583)||(20639658-20639750)
chr4 (492-583)||(25629096-25629184)
chr4 (489-583)||(20225026-20225117)
chr4 (489-583)||(47528530-47528621)
chr4 (489-583)||(48598825-48598916)
chr4 (489-583)||(13256399-13256492)
chr4 (489-563)||(20405131-20405205)
chr4 (489-581)||(29207900-29207989)
chr4 (491-543)||(16911608-16911660)
chr4 (492-580)||(21647011-21647098)
chr4 (489-585)||(44363128-44363223)
chr4 (489-583)||(30639423-30639514)
chr4 (489-584)||(48327762-48327856)
chr4 (489-583)||(54175107-54175200)
chr4 (496-583)||(54730301-54730387)
chr4 (506-583)||(33836487-33836563)
chr4 (489-583)||(5648302-5648393)
chr4 (489-583)||(9832313-9832404)
chr4 (489-583)||(47444001-47444092)
chr4 (489-582)||(6430627-6430717)
chr4 (501-583)||(30352580-30352661)
chr4 (489-563)||(30581484-30581557)
chr4 (489-582)||(40915872-40915962)
chr4 (489-584)||(30690175-30690267)
chr4 (517-584)||(38755907-38755973)
chr4 (489-583)||(51865038-51865129)
chr4 (490-563)||(17043413-17043484)
chr4 (489-574)||(19027892-19027974)
chr4 (521-583)||(32484307-32484368)
chr4 (488-582)||(8473621-8473714)
chr4 (494-563)||(20908655-20908723)
chr4 (489-562)||(21489131-21489203)
chr4 (491-583)||(5306660-5306753)
chr4 (496-583)||(10277757-10277841)
chr4 (492-580)||(10660451-10660538)
chr4 (492-580)||(10874596-10874683)
chr4 (520-583)||(38786682-38786744)
chr4 (489-583)||(55766466-55766557)
chr4 (492-573)||(9987844-9987922)
chr4 (489-563)||(39029079-39029152)
chr4 (502-562)||(25463179-25463237)
chr4 (489-561)||(49796841-49796911)
chr4 (489-537)||(25343231-25343279)
chr4 (489-541)||(35894502-35894553)
[»] chr3 (40 HSPs)
chr3 (489-583)||(46421034-46421128)
chr3 (489-583)||(13628790-13628883)
chr3 (489-583)||(29366720-29366813)
chr3 (489-581)||(353351-353442)
chr3 (489-583)||(13730602-13730695)
chr3 (489-583)||(14987023-14987116)
chr3 (489-583)||(49013473-49013566)
chr3 (489-581)||(8247688-8247780)
chr3 (489-583)||(15797286-15797377)
chr3 (489-584)||(39203580-39203672)
chr3 (489-585)||(45786212-45786307)
chr3 (489-583)||(40272812-40272903)
chr3 (489-583)||(1217154-1217245)
chr3 (489-583)||(26869772-26869863)
chr3 (489-583)||(31592913-31593004)
chr3 (489-583)||(34771364-34771455)
chr3 (489-583)||(54484757-54484848)
chr3 (490-584)||(10795422-10795515)
chr3 (489-582)||(22122918-22123008)
chr3 (489-582)||(22609831-22609921)
chr3 (489-563)||(34420662-34420735)
chr3 (492-563)||(54374364-54374434)
chr3 (489-563)||(9607269-9607343)
chr3 (489-583)||(53996565-53996657)
chr3 (508-583)||(5173719-5173793)
chr3 (489-583)||(12914035-12914126)
chr3 (489-543)||(47624107-47624159)
chr3 (489-542)||(16735506-16735557)
chr3 (489-563)||(33926148-33926221)
chr3 (490-543)||(45139515-45139568)
chr3 (495-583)||(52926219-52926304)
chr3 (489-562)||(55401242-55401314)
chr3 (489-572)||(6411833-6411913)
chr3 (489-583)||(516475-516569)
chr3 (489-563)||(7943056-7943128)
chr3 (520-583)||(24851301-24851363)
chr3 (489-543)||(26573193-26573245)
chr3 (505-563)||(25944551-25944608)
chr3 (492-573)||(45948848-45948926)
chr3 (522-583)||(30452892-30452952)
[»] chr6 (21 HSPs)
chr6 (489-583)||(12221914-12222008)
chr6 (489-583)||(29355855-29355948)
chr6 (502-583)||(2166410-2166490)
chr6 (502-583)||(2178043-2178123)
chr6 (489-583)||(1347006-1347097)
chr6 (489-583)||(1354757-1354848)
chr6 (502-583)||(12892064-12892144)
chr6 (489-583)||(25557767-25557858)
chr6 (501-583)||(12885967-12886048)
chr6 (499-583)||(3116129-3116212)
chr6 (491-563)||(7947390-7947461)
chr6 (489-583)||(26097202-26097293)
chr6 (489-543)||(6024277-6024331)
chr6 (489-583)||(9161166-9161259)
chr6 (508-579)||(14975094-14975164)
chr6 (494-563)||(32579474-32579541)
chr6 (506-585)||(16895694-16895774)
chr6 (506-585)||(16915983-16916063)
chr6 (494-573)||(3815087-3815163)
chr6 (519-583)||(6808467-6808530)
chr6 (489-541)||(24734686-24734738)
[»] chr5 (28 HSPs)
chr5 (489-583)||(38879625-38879718)
chr5 (489-585)||(13801765-13801860)
chr5 (489-583)||(4619104-4619197)
chr5 (489-579)||(27328796-27328885)
chr5 (489-580)||(7368440-7368528)
chr5 (489-583)||(8169984-8170075)
chr5 (489-583)||(32703466-32703557)
chr5 (489-583)||(43334247-43334339)
chr5 (489-582)||(20135648-20135740)
chr5 (511-583)||(25622524-25622595)
chr5 (491-585)||(34154812-34154903)
chr5 (489-583)||(41014362-41014453)
chr5 (489-586)||(16880644-16880738)
chr5 (492-583)||(24448937-24449025)
chr5 (492-583)||(35710358-35710446)
chr5 (496-584)||(1565483-1565567)
chr5 (492-582)||(12006329-12006418)
chr5 (505-583)||(16957374-16957449)
chr5 (489-563)||(19142962-19143034)
chr5 (489-563)||(43574650-43574722)
chr5 (489-583)||(29334439-29334531)
chr5 (518-584)||(30877563-30877628)
chr5 (489-583)||(3771383-3771474)
chr5 (496-541)||(12477161-12477205)
chr5 (489-538)||(42924876-42924925)
chr5 (507-563)||(10306493-10306548)
chr5 (523-583)||(16028624-16028683)
chr5 (505-545)||(39079788-39079827)
[»] chr1 (41 HSPs)
chr1 (489-583)||(18944710-18944804)
chr1 (489-583)||(30395726-30395819)
chr1 (489-583)||(42304207-42304300)
chr1 (489-583)||(35253187-35253278)
chr1 (489-583)||(20004090-20004183)
chr1 (489-584)||(4349705-4349797)
chr1 (489-583)||(38478282-38478373)
chr1 (489-583)||(46247953-46248044)
chr1 (489-583)||(10668292-10668385)
chr1 (489-563)||(27201714-27201788)
chr1 (489-583)||(35005190-35005283)
chr1 (489-583)||(34725098-34725189)
chr1 (508-583)||(50606487-50606561)
chr1 (489-583)||(18741957-18742050)
chr1 (489-543)||(19932792-19932846)
chr1 (489-580)||(46991871-46991959)
chr1 (489-583)||(19414504-19414595)
chr1 (489-573)||(10378745-10378826)
chr1 (487-583)||(14617103-14617196)
chr1 (490-562)||(15505632-15505702)
chr1 (489-560)||(12126859-12126928)
chr1 (520-583)||(27474376-27474438)
chr1 (489-563)||(31382233-31382305)
chr1 (489-583)||(41319806-41319897)
chr1 (489-583)||(47214576-47214667)
chr1 (489-562)||(18724565-18724636)
chr1 (489-578)||(23768325-23768411)
chr1 (489-542)||(31442429-31442481)
chr1 (489-561)||(32632578-32632648)
chr1 (490-543)||(35117805-35117858)
chr1 (492-543)||(20036291-20036340)
chr1 (501-580)||(45402175-45402251)
chr1 (492-583)||(2435786-2435875)
chr1 (489-583)||(43768206-43768297)
chr1 (489-562)||(11596579-11596650)
chr1 (489-539)||(22324959-22325009)
chr1 (489-527)||(46859133-46859170)
chr1 (489-518)||(4430088-4430117)
chr1 (494-562)||(44485129-44485195)
chr1 (496-583)||(1517311-1517395)
chr1 (492-579)||(45812541-45812625)
[»] chr8 (36 HSPs)
chr8 (489-585)||(16225063-16225158)
chr8 (489-583)||(20869967-20870060)
chr8 (491-583)||(7136527-7136618)
chr8 (489-583)||(6760866-6760959)
chr8 (489-583)||(26954177-26954270)
chr8 (489-583)||(39460994-39461087)
chr8 (491-578)||(5689677-5689761)
chr8 (492-573)||(20284079-20284159)
chr8 (492-573)||(21070707-21070787)
chr8 (489-583)||(2626566-2626657)
chr8 (489-583)||(12625934-12626025)
chr8 (489-583)||(12670250-12670341)
chr8 (492-583)||(25250569-25250659)
chr8 (491-584)||(17823622-17823712)
chr8 (489-582)||(45071308-45071398)
chr8 (489-584)||(13160745-13160837)
chr8 (489-583)||(19729384-19729475)
chr8 (489-583)||(28817626-28817717)
chr8 (489-583)||(30454097-30454188)
chr8 (489-583)||(35261723-35261814)
chr8 (489-583)||(36720840-36720931)
chr8 (489-583)||(44530193-44530284)
chr8 (489-538)||(43942368-43942417)
chr8 (492-563)||(8897783-8897852)
chr8 (491-562)||(24365079-24365148)
chr8 (489-583)||(10857873-10857964)
chr8 (489-543)||(29877138-29877190)
chr8 (489-573)||(44742528-44742610)
chr8 (520-583)||(28407476-28407538)
chr8 (489-583)||(29521685-29521776)
chr8 (489-539)||(17250918-17250968)
chr8 (506-583)||(26102578-26102652)
chr8 (492-583)||(5135290-5135377)
chr8 (502-583)||(16013511-16013591)
chr8 (490-563)||(44781523-44781596)
chr8 (488-563)||(24245489-24245565)
[»] chr7 (42 HSPs)
chr7 (489-585)||(47716503-47716598)
chr7 (489-583)||(42805568-42805661)
chr7 (489-583)||(43557516-43557610)
chr7 (492-583)||(19265861-19265948)
chr7 (489-583)||(21172009-21172100)
chr7 (489-583)||(42391100-42391191)
chr7 (489-543)||(46354238-46354292)
chr7 (489-585)||(48735120-48735213)
chr7 (489-583)||(32758303-32758394)
chr7 (492-584)||(10693072-10693161)
chr7 (489-573)||(38604570-38604652)
chr7 (489-583)||(7879682-7879773)
chr7 (489-582)||(11617589-11617679)
chr7 (489-543)||(33500557-33500611)
chr7 (489-585)||(22698965-22699061)
chr7 (494-562)||(28362165-28362231)
chr7 (489-584)||(2541018-2541110)
chr7 (497-573)||(21566487-21566561)
chr7 (489-583)||(31591109-31591200)
chr7 (489-583)||(42798713-42798804)
chr7 (489-583)||(14732821-14732913)
chr7 (489-563)||(17048834-17048907)
chr7 (489-537)||(23419719-23419765)
chr7 (489-573)||(35334826-35334907)
chr7 (501-562)||(39123949-39124010)
chr7 (501-583)||(45018923-45019006)
chr7 (489-552)||(14099036-14099097)
chr7 (489-552)||(14409053-14409114)
chr7 (492-583)||(19426890-19426977)
chr7 (487-558)||(48123508-48123577)
chr7 (492-562)||(18512473-18512541)
chr7 (489-583)||(27629678-27629769)
chr7 (501-583)||(27889316-27889395)
chr7 (489-563)||(34626227-34626299)
chr7 (489-564)||(35203483-35203558)
chr7 (489-583)||(35787269-35787360)
chr7 (489-583)||(39093439-39093531)
chr7 (502-579)||(47077859-47077933)
chr7 (489-562)||(16341322-16341394)
chr7 (489-561)||(19266494-19266564)
chr7 (491-582)||(18747533-18747621)
chr7 (495-582)||(29907469-29907552)
[»] chr2 (35 HSPs)
chr2 (489-585)||(14530362-14530457)
chr2 (489-583)||(10543742-10543835)
chr2 (489-583)||(9671223-9671314)
chr2 (489-583)||(10546207-10546298)
chr2 (489-583)||(24200623-24200716)
chr2 (518-583)||(1289093-1289158)
chr2 (492-583)||(5841075-5841165)
chr2 (489-583)||(21779261-21779352)
chr2 (492-586)||(23397811-23397902)
chr2 (489-583)||(36871536-36871626)
chr2 (490-583)||(8455316-8455406)
chr2 (491-583)||(17668048-17668137)
chr2 (491-583)||(17623610-17623699)
chr2 (492-583)||(30826083-30826170)
chr2 (489-583)||(14444772-14444863)
chr2 (489-543)||(22371098-22371150)
chr2 (501-579)||(24859992-24860067)
chr2 (489-583)||(25249738-25249829)
chr2 (489-583)||(25632553-25632644)
chr2 (489-543)||(32781327-32781379)
chr2 (493-583)||(40762234-40762321)
chr2 (489-539)||(19615036-19615085)
chr2 (489-563)||(31158458-31158532)
chr2 (495-583)||(11514486-11514570)
chr2 (489-573)||(12023929-12024010)
chr2 (489-586)||(44449380-44449475)
chr2 (492-563)||(17896307-17896376)
chr2 (499-583)||(23488535-23488618)
chr2 (501-563)||(4516370-4516430)
chr2 (494-563)||(13245114-13245181)
chr2 (489-562)||(21377093-21377164)
chr2 (502-563)||(19185762-19185823)
chr2 (522-583)||(34080176-34080236)
chr2 (489-585)||(14544108-14544203)
chr2 (521-581)||(41409936-41409995)
[»] scaffold0049 (1 HSPs)
scaffold0049 (489-585)||(59021-59116)
[»] scaffold0180 (1 HSPs)
scaffold0180 (493-583)||(24133-24220)
[»] scaffold0015 (1 HSPs)
scaffold0015 (489-583)||(48634-48725)
[»] scaffold0168 (1 HSPs)
scaffold0168 (489-583)||(30621-30712)
[»] scaffold0057 (2 HSPs)
scaffold0057 (492-583)||(46878-46966)
scaffold0057 (489-563)||(24791-24863)
[»] scaffold0187 (2 HSPs)
scaffold0187 (489-581)||(10052-10141)
scaffold0187 (489-581)||(20380-20469)
[»] scaffold0311 (1 HSPs)
scaffold0311 (489-563)||(10854-10926)
[»] scaffold0258 (1 HSPs)
scaffold0258 (489-583)||(13024-13115)
[»] scaffold0254 (1 HSPs)
scaffold0254 (502-543)||(4214-4256)
[»] scaffold0223 (1 HSPs)
scaffold0223 (495-584)||(11179-11265)


Alignment Details
Target: chr4 (Bit Score: 486; Significance: 0; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 30 - 583
Target Start/End: Original strand, 2812710 - 2813263
Alignment:
Q  30 aatggttggtccggaaagatggtgaaagagatgagagcataaggttgcgtcttcgcatttgtacaagtgcaaatgtattgagataaatagatagatggta 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2812710 aatggttggtccggaaagatggtgaaagagatgagagcataaggttgcgtctttgcattggtacaagtgcaaatgtattgagataaatagatagatggta 2812809  T
Q  130 agtttttagaagaacttataaaaagagcttatgaagttgtttagaagtcgttttcaacttattgttgtatgatctttttgatagtttagtcataacctat 229  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2812810 agtttttagaagaacttacaaaaagagcttatgaagttgtttagaagtcgttttcaacttattgttgtatgatctttttgatagtttagtcataacctat 2812909  T
Q  230 tttctctaatgtagagtttgccctaatttttctttacaaatcataagttttttctttgatagtagaaataatatagaagcttttacactgtaagggattg 329  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2812910 tttctctaatgtagagtttgccctaatttttctttacaagccataagttttttctttgatagtagaaataatatagaagcttttacactgtaagggattg 2813009  T
Q  330 tttggtgcgcatattaaaatccgtctttgatacaccaataagaaaagataaactaaaccatttactaaccctctcttattgactctagctacatgatatc 429  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2813010 tttggtgcacatattaaaatccgtctttgatacaccaataagaaaagataaactaaaccatttactaaccctctcttattgactctagctacatgatagc 2813109  T
Q  430 atatttcaaacctaacacacgaactataaatttattacccgtatcttctcttgtcccataacagggtaagactgcgtacaatacaccaataatggtggaa 529  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |    
T  2813110 atatttcaaatctaacacacgaactataaatttattacccgtatcttctcttgtctcataacagggtaagactgcgtacaatacatcaataatggtggga 2813209  T
Q  530 ccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||| |||||| || || | |||| ||||||||||||||||||||||||||||||    
T  2813210 ccctttcccgaacgatgcgtatgcgggagctttaagtgcaccggattgcccttt 2813263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 16408694 - 16408601
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||| |||||||||| |||||||||    
T  16408694 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccccgcatatgcgggagcttt-agtgcaccgggttgcccttt 16408601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 490 - 585
Target Start/End: Original strand, 20225119 - 20225213
Alignment:
Q  490 acagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttat 585  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||   |||||| ||||||||| |||||||||| |||||||||||    
T  20225119 acagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttt-agtgcaccgggttgccctttat 20225213  T

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Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 23501831 - 23501924
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||  |||||||||||||||||||||||||| ||||||||||||||| | |||||| ||||||||| |||||||||| |||||||||    
T  23501831 aacagggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggaccctgcatatgcgggagcttt-agtgcaccgggttgcccttt 23501924  T

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Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 11054239 - 11054148
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  11054239 aacagggtaagactgcgtacaatacacca--aatggcggaaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 11054148  T

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Target: chr4; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 20639750 - 20639658
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  20639750 aacagggtaaggctgcgtacaatacaccaa-aatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 20639658  T

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Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 492 - 583
Target Start/End: Original strand, 25629096 - 25629184
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||| ||| ||||||||||||||  ||||||| ||||||||||||||| |||||||| ||||||||| |||||||||| |||||||||    
T  25629096 agggtaaggctgtgtacaatacaccaa--atggtgggaccccttcccggaccctacatatgcgggagcttt-agtgcaccgggttgcccttt 25629184  T

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Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 20225026 - 20225117
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  20225026 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 20225117  T

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Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 47528621 - 47528530
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| |  ||||||||||||| | |||||||||| |||||||||    
T  47528621 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgaatatgtgggagctct-agtgcaccgggttgcccttt 47528530  T

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Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 48598916 - 48598825
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||| ||||||  |||||| | |||||||||| |||||||||    
T  48598916 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccatgcatatgccggagctct-agtgcaccgggttgcccttt 48598825  T

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Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 13256492 - 13256399
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||||||| |||   ||| || ||||||||| |||||||||| |||||||||    
T  13256492 aacagggtaaggctgcgtacaatacaccaataatagtgggaccccttcccgaaccccgcatctgcgggagcttt-agtgcaccgggttgcccttt 13256399  T

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Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 489 - 563
Target Start/End: Original strand, 20405131 - 20405205
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||||||||||||   |||||| ||||||||||    
T  20405131 aacagggtaagattgcgtacaatacactaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 20405205  T

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Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 489 - 581
Target Start/End: Complemental strand, 29207989 - 29207900
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccct 581  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||    
T  29207989 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgccct 29207900  T

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Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 491 - 543
Target Start/End: Original strand, 16911608 - 16911660
Alignment:
Q  491 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  16911608 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggacc 16911660  T

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Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 492 - 580
Target Start/End: Original strand, 21647011 - 21647098
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccc 580  Q
    |||||||| |||||||||||| |||||||||||||| |||||||||| ||||   |||||| ||||||||| |||||||||| ||||||    
T  21647011 agggtaaggctgcgtacaatataccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt-agtgcaccgggttgccc 21647098  T

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Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 585
Target Start/End: Complemental strand, 44363223 - 44363128
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttat 585  Q
    ||||||||| | ||||||||||  |||||| |||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||||    
T  44363223 aacagggtagggctgcgtacaacgcaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgccctttat 44363128  T

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Target: chr4; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 30639423 - 30639514
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||  ||||||||||||||| | |||||| ||||||||| ||||||| || |||||||||    
T  30639423 aacagggtaaggctgcgtacaatacacca--aatggtgagaccccttcccggaccctgcatatgcgggagcttt-agtgcactgggttgcccttt 30639514  T

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Target: chr4; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 584
Target Start/End: Complemental strand, 48327856 - 48327762
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||||| |||  ||||||| || || ||| |||||||||| || |||||||    
T  48327856 aacagggtaagactgcatacaatacaccaataatggtgggacctcttcccgaaccccacatatgcggaag-ttttagtgcaccgggttacccttta 48327762  T

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Target: chr4; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 54175107 - 54175200
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaacccctt-cccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||| |||||||| | |||||| ||||||||| ||||||||||  ||||||||    
T  54175107 aacagggtaaggctgcgtacaatacaccaa-aatggtgggaccccttccccggaccctgcatatgcgggagcttt-agtgcaccgggctgcccttt 54175200  T

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Target: chr4; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 496 - 583
Target Start/End: Original strand, 54730301 - 54730387
Alignment:
Q  496 taagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||||||| | | |||| ||||||||| ||||||||| ||| ||||||    
T  54730301 taaggctgcgtataatacaccaataatgatggaaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgaattacccttt 54730387  T

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Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 506 - 583
Target Start/End: Complemental strand, 33836563 - 33836487
Alignment:
Q  506 tacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||||||||||||| ||||||||||||||| | | |||| ||||||||| |||||| ||| |||||||||    
T  33836563 tacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaacgggttgcccttt 33836487  T

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Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 5648302 - 5648393
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | | |||| |||||| || ||||||| || |||||||||    
T  5648302 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcgtatgcgggagc-ttcagtgcactgggttgcccttt 5648393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 9832404 - 9832313
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | ||||||  ||| || | |||||||||| |||||||||    
T  9832404 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcaggaactct-agtgcaccgggttgcccttt 9832313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 47444001 - 47444092
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | ||||||  ||||| || ||||||| || |||||||||    
T  47444001 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcaggagc-ttcagtgcactgggttgcccttt 47444092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 6430717 - 6430627
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctt 582  Q
    ||||||||||| |||||||||||||||||  |||||||| ||| ||||||||||| | | |||| ||||||||| || ||||||| ||||||||    
T  6430717 aacagggtaaggctgcgtacaatacacca--aatggtgggaccacttcccggaccctgcgtatgcgggagcttt-agcgcaccgggttgccctt 6430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 501 - 583
Target Start/End: Complemental strand, 30352661 - 30352580
Alignment:
Q  501 ctgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||||||||| |||||||| |||||||| |||||| | | |||| ||||||||| |||||||||  |||||||||    
T  30352661 ctgcgtacaatacaccaaaaatggtgggaccccttctcggaccctgcgtatgcgggagcttt-agtgcaccgtgttgcccttt 30352580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 563
Target Start/End: Complemental strand, 30581557 - 30581484
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||||||  || |||||||||||||| |||||||| ||||||||||||||| | ||||||| |||||||||    
T  30581557 aacagggtaagggtgtgtacaatacaccaa-aatggtgggaccccttcccggaccctgcatatgtaggagcttta 30581484  T

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Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 582
Target Start/End: Original strand, 40915872 - 40915962
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctt 582  Q
    |||| |||||| |||||||||||||||||  |||||||| | ||||||||||||| | | |||| |||||| || |||||||||||||||||||    
T  40915872 aacaaggtaaggctgcgtacaatacacca--aatggtgggagcccttcccggaccctgcgtatgcgggagc-ttcagtgcaccggattgccctt 40915962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 584
Target Start/End: Complemental strand, 30690267 - 30690175
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    ||||||||||| |||| ||||||||||||||  |||||| ||||||||||||||| | | |||| ||||||||| |||||||| |  |||||||||    
T  30690267 aacagggtaaggctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccaggctgcccttta 30690175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 517 - 584
Target Start/End: Complemental strand, 38755973 - 38755907
Alignment:
Q  517 aataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    ||||||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| ||||||||||    
T  38755973 aataatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttta 38755907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 51865129 - 51865038
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| |||||| |||||||||||||||||  ||||||||  |||||||||||||| | | |||| ||||||||| | ||||||||| ||||||||    
T  51865129 aacatggtaaggctgcgtacaatacacca--aatggtggggccccttcccggaccctgcgtatgcgggagcttt-attgcaccggactgcccttt 51865038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 563
Target Start/End: Complemental strand, 17043484 - 17043413
Alignment:
Q  490 acagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||||| |||||||||||||||||  |||||||| |||||||||| |||| | ||||||  |||||||||    
T  17043484 acagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccagaccctgcatatgctggagcttta 17043413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 574
Target Start/End: Original strand, 19027892 - 19027974
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccgga 574  Q
    ||||||||||| |||||||||||||||||||  |||||| ||||||| || |||  | | |||||||||||||| |||||||||||    
T  19027892 aacagggtaaggctgcgtacaatacaccaat--tggtgggacccctttccagactctgcgtatgtgggagcttt-agtgcaccgga 19027974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 583
Target Start/End: Original strand, 32484307 - 32484368
Alignment:
Q  521 atggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||| ||||||||||||||| | |||||| ||||||||| |||||||||| |||||||||    
T  32484307 atggtgggaccccttcccggaccctgcatatgcgggagcttt-agtgcaccgggttgcccttt 32484368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 582
Target Start/End: Complemental strand, 8473714 - 8473621
Alignment:
Q  488 taacagggtaagactgcgtacaatacaccaataatggtggaacccctt-cccgga-ccatacatatgtgggagctttaagtgcaccggattgccctt 582  Q
    |||||||||||| |||| ||||||||||||  |||||||| ||||||| |||||| || | |||||| ||||||||| |||||||||| ||||||||    
T  8473714 taacagggtaaggctgcatacaatacacca--aatggtgggaccccttccccggacccctgcatatgcgggagcttt-agtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 563
Target Start/End: Complemental strand, 20908723 - 20908655
Alignment:
Q  494 ggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||| ||| | | |||| ||||||||||    
T  20908723 ggtaaggctgcgtacaatacaccaa-aatggtgggaccccttcccgaaccctgcgtatgcgggagcttta 20908655  T

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Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 21489131 - 21489203
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    ||||| ||||||||||||||||| |||||| |||||||| ||||||||||| ||| | | |||| |||||||||    
T  21489131 aacagagtaagactgcgtacaatgcaccaa-aatggtgggaccccttcccgaaccctgcgtatgcgggagcttt 21489203  T

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Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 491 - 583
Target Start/End: Complemental strand, 5306753 - 5306660
Alignment:
Q  491 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgt----gggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||  |||||||||||||||||  ||||||| ||||||||||||||| | | |||||    ||||||||||| |||||||| |||||||||    
T  5306753 cagggtaaggttgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgtggacgggagctttaa-tgcaccgggttgcccttt 5306660  T

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Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 583
Target Start/End: Complemental strand, 10277841 - 10277757
Alignment:
Q  496 taagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| ||||||||||||||||||  |||||| ||||||||||| |||| | |||||| ||||| ||  |||| |||||||||||||||    
T  10277841 taaggctgcgtacaatacaccaa--atggtgaaaccccttcccagaccctgcatatgcgggag-ttctagtgaaccggattgcccttt 10277757  T

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Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 580
Target Start/End: Original strand, 10660451 - 10660538
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccc 580  Q
    |||||| | |||| |||||||||||||||||||||  |||||||||  |||| | | |||| |||||||||||||||| ||| ||||||    
T  10660451 agggtatggctgcatacaatacaccaataatggtgagaccccttccaagacc-tgcgtatgcgggagctttaagtgcatcgggttgccc 10660538  T

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Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 580
Target Start/End: Original strand, 10874596 - 10874683
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccc 580  Q
    |||||| | |||| |||||||||||||||||||||  |||||||||  |||| | | |||| |||||||||||||||| ||| ||||||    
T  10874596 agggtatggctgcatacaatacaccaataatggtgagaccccttccaagacc-tgcgtatgcgggagctttaagtgcatcgggttgccc 10874683  T

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Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 583
Target Start/End: Original strand, 38786682 - 38786744
Alignment:
Q  520 aatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  38786682 aatggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 38786744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 55766557 - 55766466
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||    |||||||||||||| ||||||||| | | |||| | ||||||| ||||||||||  ||||||||    
T  55766557 aacagggtaaggctgcgtacaatacac--tgaatggtggaaccccatcccggaccttgcgtatgcgagagcttt-agtgcaccgggatgcccttt 55766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 573
Target Start/End: Complemental strand, 9987922 - 9987844
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccgg 573  Q
    |||||||| |||| |||||||||||||  ||||||| |||||||||  |||| | |||||| ||||||||||| ||||||||    
T  9987922 agggtaaggctgcatacaatacaccaa--atggtgggaccccttccttgaccttgcatatgcgggagctttaa-tgcaccgg 9987844  T

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Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 563
Target Start/End: Complemental strand, 39029152 - 39029079
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    ||||||||||| ||| ||||||||||| || |||||||| ||| ||| ||||||| | |||||| ||||||||||    
T  39029152 aacagggtaaggctgtgtacaatacacgaa-aatggtgggaccactttccggaccctgcatatgcgggagcttta 39029079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 562
Target Start/End: Original strand, 25463179 - 25463237
Alignment:
Q  502 tgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    ||||||||| |||||||  ||||||| ||||||||||||||| | |||||| |||||||||    
T  25463179 tgcgtacaacacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagcttt 25463237  T

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Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 561
Target Start/End: Original strand, 49796841 - 49796911
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctt 561  Q
    |||| |||||| |||||||||||||||||  |||||||| ||||||||||| ||| | | |||| ||||||||    
T  49796841 aacatggtaaggctgcgtacaatacacca--aatggtgggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 537
Target Start/End: Original strand, 25343231 - 25343279
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcc 537  Q
    ||||||||||| |||||||||||||||||| || ||| | |||||||||    
T  25343231 aacagggtaaggctgcgtacaatacaccaaaaagggttggaccccttcc 25343279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 541
Target Start/End: Complemental strand, 35894553 - 35894502
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccgga 541  Q
    |||| ||||||  ||||||||||||||||| |||||||| |||||||||||||    
T  35894553 aacacggtaagtgtgcgtacaatacaccaa-aatggtgggaccccttcccgga 35894502  T

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Target: chr3 (Bit Score: 67; Significance: 2e-29; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 46421128 - 46421034
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | | |||| |||||||||||||||||||| |||||||||    
T  46421128 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttaagtgcaccggtttgcccttt 46421034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 13628883 - 13628790
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  13628883 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 13628790  T

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Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 29366813 - 29366720
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | | |||||||||||||| ||||||| || |||||||||    
T  29366813 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgtgggagcttt-agtgcactgggttgcccttt 29366720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 489 - 581
Target Start/End: Complemental strand, 353442 - 353351
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccct 581  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||   |||||| ||||||||| |||||||||| |||||||    
T  353442 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttt-agtgcaccgggttgccct 353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 13730695 - 13730602
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||   |||||| ||||||||| |||||||||| |||||||||    
T  13730695 aacagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttt-agtgcaccgggttgcccttt 13730602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 14987023 - 14987116
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||| | |||||| ||||||||| |||||||||| || ||||||    
T  14987023 aacagggtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcgggagcttt-agtgcaccgggtttcccttt 14987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 49013566 - 49013473
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||   |||| | ||||||||| |||||||||| |||||||||    
T  49013566 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagcttt-agtgcaccgggttgcccttt 49013473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 489 - 581
Target Start/End: Complemental strand, 8247780 - 8247688
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccct 581  Q
    |||||||||||  |||||||||||||||||||||||||| || |||||||||||| | | |||| ||||||||||||||||| || |||||||    
T  8247780 aacagggtaaggttgcgtacaatacaccaataatggtgggactccttcccggaccctgcgtatgcgggagctttaagtgcactgggttgccct 8247688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 15797286 - 15797377
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||  ||||||| ||||||||||||||| | |||||||||||||| | |||||||||| |||||||||    
T  15797286 aacagggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgtgggagctct-agtgcaccgggttgcccttt 15797377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 584
Target Start/End: Original strand, 39203580 - 39203672
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    |||||||||||  |||||||||||||||||  ||||||| ||||||||||||||| | |||||| ||||||||| |||||||||| ||||||||||    
T  39203580 aacagggtaaggttgcgtacaatacaccaa--atggtgggaccccttcccggaccttgcatatgcgggagcttt-agtgcaccgggttgcccttta 39203672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 585
Target Start/End: Complemental strand, 45786307 - 45786212
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttat 585  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| | |  |||  |||||||| |||||||||| |||||||||||    
T  45786307 aacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagcttt-agtgcaccgggttgccctttat 45786212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 40272903 - 40272812
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  40272903 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 40272812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 1217154 - 1217245
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  ||||| || ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  1217154 aacagggtaaggctgcgtacaatacacca--aatggcgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 1217245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 26869772 - 26869863
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||| ||||||||| | |||| |||||||||  ||||||||| |||||||||    
T  26869772 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttgccggaccatgcgtatgcgggagcttt-ggtgcaccgggttgcccttt 26869863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 31592913 - 31593004
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| || |||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  31592913 aacagggtaaggctgcgtacaatacacca--aatggtgggactccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 34771455 - 34771364
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| ||||||| | ||||||||||  ||||||||    
T  34771455 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggctgcccttt 34771364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 54484757 - 54484848
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| |||||| ||||||||||||||||||  ||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  54484757 aacaaggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 54484848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 584
Target Start/End: Complemental strand, 10795515 - 10795422
Alignment:
Q  490 acagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||| ||||| | | |||| |||||| || |||||||| | ||||||||||    
T  10795515 acagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagc-ttcagtgcaccaggttgcccttta 10795422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 22123008 - 22122918
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctt 582  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| | ||||| | |||||||||| ||||||||    
T  22123008 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgagagctct-agtgcaccgggttgccctt 22122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 582
Target Start/End: Original strand, 22609831 - 22609921
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctt 582  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | | |||| |||||| || |||||||||| ||||||||    
T  22609831 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccttgcgtatgcgggagc-ttcagtgcaccgggttgccctt 22609921  T

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Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 563
Target Start/End: Complemental strand, 34420735 - 34420662
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    ||||||||||| |||||||| ||||||||| |||||||| ||||||||||||||| | | |||||||||||||||    
T  34420735 aacagggtaaggctgcgtaccatacaccaa-aatggtgggaccccttcccggaccttgcgtatgtgggagcttta 34420662  T

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Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 492 - 563
Target Start/End: Complemental strand, 54374434 - 54374364
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||| ||||||||||| |||||| |||||||| ||||||||||||||| | |||||| ||||||||||    
T  54374434 agggtaaggctgcgtacaatccaccaa-aatggtgggaccccttcccggaccctgcatatgcgggagcttta 54374364  T

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Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 563
Target Start/End: Original strand, 9607269 - 9607343
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    ||||||||||| ||||||| ||||||||||||||| ||| |||||||||| ||||   |||||| ||||||||||    
T  9607269 aacagggtaaggctgcgtagaatacaccaataatgttgggaccccttcccagaccccgcatatgcgggagcttta 9607343  T

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Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 53996657 - 53996565
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||| ||||||||||||| |||||||| |||||||||| |||  | | |||||||||||||| ||||||||||  ||||||||    
T  53996657 aacagggtaaggctgcttacaatacaccaa-aatggtgggaccccttccctgacactgcgtatgtgggagcttt-agtgcaccgggctgcccttt 53996565  T

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Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 508 - 583
Target Start/End: Complemental strand, 5173793 - 5173719
Alignment:
Q  508 caatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||  |||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  5173793 caatacaccaaaaatggtggggccccttcccggaccttgcgtatgcgggagcttt-agtgcaccgggttgcccttt 5173719  T

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Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 12914126 - 12914035
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| | |||||||||||||||  |||||||  |||||||||| |||| | |||||| |||||||| || |||||||| |||||||||    
T  12914126 aacagggtaaggcggcgtacaatacacca--aatggtgagaccccttcccagaccctgcatatgcgggagcttcaa-tgcaccgggttgcccttt 12914035  T

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Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 47624107 - 47624159
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    ||||||||||| |||||||||||||||||  |||||||| |||||||||||||||    
T  47624107 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggacc 47624159  T

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Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 542
Target Start/End: Original strand, 16735506 - 16735557
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggac 542  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||    
T  16735506 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggac 16735557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 563
Target Start/End: Original strand, 33926148 - 33926221
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    ||||||||||| ||| |||||||||||| |||||||||| ||||||||| ||||| | |||||| | ||||||||    
T  33926148 aacagggtaaggctgtgtacaatacacc-ataatggtgggaccccttcctggaccctgcatatgcgagagcttta 33926221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 543
Target Start/End: Complemental strand, 45139568 - 45139515
Alignment:
Q  490 acagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    |||||||||| |||| ||||||||||||| |||||||| |||||||||| ||||    
T  45139568 acagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccagacc 45139515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 583
Target Start/End: Complemental strand, 52926304 - 52926219
Alignment:
Q  495 gtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||| ||||||||||||||||||  ||||||| || |||||||||||| | | |||| ||||||||| || ||||||| |||||||||    
T  52926304 gtaaggctgcgtacaatacaccaa--atggtgggacaccttcccggaccctgcgtatgcgggagcttt-agcgcaccgggttgcccttt 52926219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 55401242 - 55401314
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    |||||| |||||||||||| |||||||||| |||||||| |||||||| |||||| | | |||| |||||||||    
T  55401242 aacaggttaagactgcgtataatacaccaa-aatggtgggaccccttctcggaccttccgtatgcgggagcttt 55401314  T

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Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 572
Target Start/End: Complemental strand, 6411913 - 6411833
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccg 572  Q
    ||||||||||| |||||||||||||||||  |||| ||| |||||||||| |||| | | |||| ||||||||| |||||||||    
T  6411913 aacagggtaaggctgcgtacaatacacca--aatgatgggaccccttcccagaccttgcgtatgcgggagcttt-agtgcaccg 6411833  T

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Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 516475 - 516569
Alignment:
Q  489 aacagggtaagactgcgtacaatacacc-aataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||| |||||| ||| || ||||| || |||||||||| |||| | | |||| ||||||||| |||||||||| |||||||||    
T  516475 aacagggtaaggctgcgcacaataaaccaaaaaatggcgggaccccttccccgaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 516569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 563
Target Start/End: Original strand, 7943056 - 7943128
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||||||||||||||||||||| ||  |||||||| | ||||| || |||||| | |||| ||||||||||    
T  7943056 aacagggtaagactgcgtacaatacatca--aatggtgggatccctttccagaccatgcgtatgcgggagcttta 7943128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 583
Target Start/End: Complemental strand, 24851363 - 24851301
Alignment:
Q  520 aatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||| ||||||||||||| | | |||||| ||||||||| |||||||||| |||||||||    
T  24851363 aatggtgggaccccttcccggatcctgcatatgcgggagcttt-agtgcaccgggttgcccttt 24851301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 26573193 - 26573245
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    ||||||||||| |||||||||||||||||||  |||||| ||||| |||||||||    
T  26573193 aacagggtaaggctgcgtacaatacaccaat--tggtgggaccccatcccggacc 26573245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 563
Target Start/End: Original strand, 25944551 - 25944608
Alignment:
Q  505 gtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||||||||| |||||||| |||||||||| |||| | | |||||||||||||||    
T  25944551 gtacaatacaccaa-aatggtgggaccccttccctgaccctgcgtatgtgggagcttta 25944608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 573
Target Start/End: Complemental strand, 45948926 - 45948848
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccgg 573  Q
    |||||||| |||| ||||||||||||||  |||||| |||||||| |||||| | | |||| ||||||||| ||||||||||    
T  45948926 agggtaaggctgcatacaatacaccaat--tggtgggaccccttctcggaccctgcgtatgcgggagcttt-agtgcaccgg 45948848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 522 - 583
Target Start/End: Original strand, 30452892 - 30452952
Alignment:
Q  522 tggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  30452892 tggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 30452952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 12222008 - 12221914
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  12222008 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgcccttt 12221914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 29355948 - 29355855
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  29355948 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 29355855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 502 - 583
Target Start/End: Complemental strand, 2166490 - 2166410
Alignment:
Q  502 tgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||  ||||||||| |||||||||| |||||||||    
T  2166490 tgcgtacaatacaccaataatggtgggaccccttcccggaccctatatattcgggagcttt-agtgcaccgggttgcccttt 2166410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 502 - 583
Target Start/End: Complemental strand, 2178123 - 2178043
Alignment:
Q  502 tgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||||||||||||||||| ||||||||||||||| || ||||  ||||||||| |||||||||| |||||||||    
T  2178123 tgcgtacaatacaccaataatggtgggaccccttcccggaccctatatattcgggagcttt-agtgcaccgggttgcccttt 2178043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 1347006 - 1347097
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  1347006 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 1347097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 1354848 - 1354757
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  1354848 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 1354757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 502 - 583
Target Start/End: Original strand, 12892064 - 12892144
Alignment:
Q  502 tgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||| ||||||||||||||||||| |||||||||||||||   |||||| ||||||||| |||||||||| |||||||||    
T  12892064 tgcgtataatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttt-agtgcaccgggttgcccttt 12892144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 25557767 - 25557858
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  ||||  |||||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  25557767 aacagggtaaggctgcgtacaatacacca--aatgaaggaaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 25557858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 501 - 583
Target Start/End: Original strand, 12885967 - 12886048
Alignment:
Q  501 ctgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||||||| || |||||||| |||||||||| |||| | | |||||||||||||| |||||||||| |||||||||    
T  12885967 ctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggagcttt-agtgcaccgggttgcccttt 12886048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 583
Target Start/End: Complemental strand, 3116212 - 3116129
Alignment:
Q  499 gactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||| |||||||||||| |||||||| |||||||| |||||| | | |||| ||||||||| ||| ||||||||||||||||    
T  3116212 gactgcgcacaatacaccaaaaatggtgggaccccttctcggaccttgcgtatgcgggagcttt-agtacaccggattgcccttt 3116129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 491 - 563
Target Start/End: Complemental strand, 7947461 - 7947390
Alignment:
Q  491 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    ||||||||| |||||||||||||||||| ||||||||  |||||||||||||| | | |||||||||||||||    
T  7947461 cagggtaaggctgcgtacaatacaccaa-aatggtgggcccccttcccggaccttgcgtatgtgggagcttta 7947390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 26097202 - 26097293
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  ||||  || ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  26097202 aacagggtaaggctgcgtacaatacacca--aatgaagggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 26097293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 6024277 - 6024331
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    |||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||    
T  6024277 aacatggtaagactgcgtacaatacaccaataatgatgggacctcttcccggacc 6024331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 9161166 - 9161259
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||| ||||| |||||||||||||| |||||||||||| |||||||| |||||| | | |||| || |||||| |||||||| | |||||||||    
T  9161166 aacagagtaaggctgcgtacaatacatcaataatggtgggaccccttctcggaccctgcgtatgcggaagcttt-agtgcaccaggttgcccttt 9161259  T

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Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 579
Target Start/End: Complemental strand, 14975164 - 14975094
Alignment:
Q  508 caatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcc 579  Q
    |||||||||||||||||||| ||||||||||| |||   |||||| ||||| ||| |||||||||| |||||    
T  14975164 caatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggag-ttttagtgcaccgggttgcc 14975094  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 563
Target Start/End: Original strand, 32579474 - 32579541
Alignment:
Q  494 ggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||| ||||||||||||| |||  |||||||| |||||||||| |||| | |||||| ||||||||||    
T  32579474 ggtaagcctgcgtacaatacccca--aatggtgggaccccttcccagaccctgcatatgcgggagcttta 32579541  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 585
Target Start/End: Complemental strand, 16895774 - 16895694
Alignment:
Q  506 tacaatacaccaataatggtggaacccc-ttcccggaccatacatatgtgggagctttaagtgcacc-ggattgccctttat 585  Q
    |||||||||| || |||||||| ||||| |||||||||| ||||||||||| || ||| |||||||| || |||||||||||    
T  16895774 tacaatacactaaaaatggtgggacccccttcccggaccctacatatgtggaag-ttttagtgcaccgggtttgccctttat 16895694  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 585
Target Start/End: Complemental strand, 16916063 - 16915983
Alignment:
Q  506 tacaatacaccaataatggtggaacc-ccttcccggaccatacatatgtgggagctttaagtgcaccgga-ttgccctttat 585  Q
    |||||||||| || |||||| | ||| ||||||  |||| |||||||||||||||||| ||||||||||| |||||||||||    
T  16916063 tacaatacactaaaaatggtaggacctccttcctagaccctacatatgtgggagcttt-agtgcaccggatttgccctttat 16915983  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 573
Target Start/End: Complemental strand, 3815163 - 3815087
Alignment:
Q  494 ggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccgg 573  Q
    |||| |||||||||||||||||||  |||||||| |||| |||||| ||| ||| |||| || |||||| ||||||||||    
T  3815163 ggtacgactgcgtacaatacacca--aatggtgggaccctttcccgaaccctacgtatgcggaagcttt-agtgcaccgg 3815087  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 583
Target Start/End: Original strand, 6808467 - 6808530
Alignment:
Q  519 taatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||| ||||||||||||||| |   |||| ||||||||| |||||||||| |||||||||    
T  6808467 taatggtgggaccccttcccggaccctgtgtatgcgggagcttt-agtgcaccgggttgcccttt 6808530  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 541
Target Start/End: Original strand, 24734686 - 24734738
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccgga 541  Q
    |||||||||||  ||||||||||||| ||| || ||||| |||||||||||||    
T  24734686 aacagggtaaggttgcgtacaatacaacaaaaaaggtgggaccccttcccgga 24734738  T

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Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 38879625 - 38879718
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  38879625 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 38879718  T

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Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 489 - 585
Target Start/End: Complemental strand, 13801860 - 13801765
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttat 585  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||   |||||| | ||||||| |||||||||| |||||||||||    
T  13801860 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagcttt-agtgcaccgggttgccctttat 13801765  T

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Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 4619197 - 4619104
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||   |||||| | ||||||| |||||||||| |||||||||    
T  4619197 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagcttt-agtgcaccgggttgcccttt 4619104  T

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Target: chr5; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 489 - 579
Target Start/End: Original strand, 27328796 - 27328885
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcc 579  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| | | |||| ||||||||||| |||| |||||||||    
T  27328796 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccgaaccctgcgtatgcgggagctttaa-tgcatcggattgcc 27328885  T

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Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 580
Target Start/End: Original strand, 7368440 - 7368528
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccc 580  Q
    ||||||||||| |||||||||||||||||||  |||||| ||||||||||||||| | |||||||||||||| | |||||||||| ||||||    
T  7368440 aacagggtaaggctgcgtacaatacaccaat--tggtgggaccccttcccggaccctgcatatgtgggagctct-agtgcaccgggttgccc 7368528  T

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Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 8170075 - 8169984
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| ||||| ||| |||||||||| |||||||||    
T  8170075 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgggag-tttcagtgcaccgggttgcccttt 8169984  T

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Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 32703466 - 32703557
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  32703466 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 32703557  T

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Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 43334247 - 43334339
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| | |  ||| ||||||||| |||||||||| |||||||||    
T  43334247 aacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgc-gatgcgggagcttt-agtgcaccgggttgcccttt 43334339  T

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Target: chr5; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 489 - 582
Target Start/End: Original strand, 20135648 - 20135740
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctt 582  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||   ||||||  ||||| || |||||||||| ||||||||    
T  20135648 aacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagc-ttcagtgcaccgggttgccctt 20135740  T

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Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 511 - 583
Target Start/End: Original strand, 25622524 - 25622595
Alignment:
Q  511 tacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||||||||| ||||||||||||||| | | |||| ||||||||| ||||||||||||||||||||    
T  25622524 tacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccggattgcccttt 25622595  T

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Target: chr5; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 491 - 585
Target Start/End: Complemental strand, 34154903 - 34154812
Alignment:
Q  491 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttat 585  Q
    ||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| || |||| | |||||||||| |||||||||||    
T  34154903 cagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcggtagctct-agtgcaccgggttgccctttat 34154812  T

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Target: chr5; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 41014362 - 41014453
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||| |||||   |||||| ||||||||| |||||||||| |||||||||    
T  41014362 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcctggaccccgcatatgcgggagcttt-agtgcaccgggttgcccttt 41014453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 586
Target Start/End: Complemental strand, 16880738 - 16880644
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttatc 586  Q
    ||||||||||| |||||||||||||||||  |||||||  ||| ||||||||||||| | |||| ||||||||| |||||||||| || |||||||||    
T  16880738 aacagggtaaggctgcgtacaatacacca--aatggtgtgaccacttcccggaccatgcgtatgcgggagcttt-agtgcaccgggtttccctttatc 16880644  T

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Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 492 - 583
Target Start/End: Original strand, 24448937 - 24449025
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||| |||||||||||||||||  |||||||| ||||||||||||||| | | ||||  |||||||| |||||||||| |||||||||    
T  24448937 agggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcgtatgcaggagcttt-agtgcaccgggttgcccttt 24449025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 492 - 583
Target Start/End: Original strand, 35710358 - 35710446
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||| |||||| |||||||||||  ||||||| ||||||||||||| ||| |||||| ||||||| | |||||||||| |||||||||    
T  35710358 agggtaaggctgcgttcaatacaccaa--atggtgggaccccttcccggaacatgcatatgcgggagctct-agtgcaccgggttgcccttt 35710446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 496 - 584
Target Start/End: Original strand, 1565483 - 1565567
Alignment:
Q  496 taagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    |||| ||||||||||| ||||||  |||| || ||||||||||||||| | |||||||||||||||  |||||||||| ||||||||||    
T  1565483 taaggctgcgtacaatgcaccaa--atggcgggaccccttcccggaccctgcatatgtgggagctt--agtgcaccgggttgcccttta 1565567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 492 - 582
Target Start/End: Complemental strand, 12006418 - 12006329
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctt 582  Q
    |||||||| || | |||||||||||||||||||||| |||||||||| |||| | | |||| ||||||||| |||||||||  ||||||||    
T  12006418 agggtaaggctccatacaatacaccaataatggtgggaccccttcccagaccctgcctatgcgggagcttt-agtgcaccgtgttgccctt 12006329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 583
Target Start/End: Original strand, 16957374 - 16957449
Alignment:
Q  505 gtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||||||  ||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  16957374 gtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 16957449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 563
Target Start/End: Complemental strand, 19143034 - 19142962
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    ||||||||||| ||||||||| ||||||||  ||||||| ||||||||||||||||| | |||| ||||| ||||    
T  19143034 aacagggtaaggctgcgtacagtacaccaa--atggtgggaccccttcccggaccatgcgtatgcgggagattta 19142962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 563
Target Start/End: Original strand, 43574650 - 43574722
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    ||||||||||| |||||||||||| |||||  ||||||| ||||||||||||||| | | |||| ||||||||||    
T  43574650 aacagggtaaggctgcgtacaatataccaa--atggtgggaccccttcccggaccctgcgtatgcgggagcttta 43574722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 29334439 - 29334531
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| |||||| |||||||||||||||| | |||||||| |||| |||||||||| | | ||||||||| |||||| ||||||||  ||||||||    
T  29334439 aacaaggtaaggctgcgtacaatacacc-agaatggtgggacccattcccggaccctgcgtatgtgggatctttaa-tgcaccgggctgcccttt 29334531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 518 - 584
Target Start/End: Complemental strand, 30877628 - 30877563
Alignment:
Q  518 ataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    |||| ||||| ||||||||||||||| | |||||||||||||| | |||||||||| ||||||||||    
T  30877628 ataaaggtgggaccccttcccggaccctgcatatgtgggagctct-agtgcaccgggttgcccttta 30877563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 3771383 - 3771474
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||| | |||||||||||||  |||||| ||||||||||||||  |   |||||||||||||| ||||||||||  ||||||||    
T  3771383 aacagggtaaggctgtgaacaatacaccaat--tggtgggaccccttcccggactctgtgtatgtgggagcttt-agtgcaccgggctgcccttt 3771474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 541
Target Start/End: Complemental strand, 12477205 - 12477161
Alignment:
Q  496 taagactgcgtacaatacaccaataatggtggaaccccttcccgga 541  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||    
T  12477205 taaggctgcgtacaatacaccaa-aatggtgggaccccttcccgga 12477161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 538
Target Start/End: Complemental strand, 42924925 - 42924876
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttccc 538  Q
    |||||||||||  ||||||||||||||||| |||| ||||| ||||||||    
T  42924925 aacagggtaaggttgcgtacaatacaccaaaaatgatggaatcccttccc 42924876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 563
Target Start/End: Complemental strand, 10306548 - 10306493
Alignment:
Q  507 acaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||||||| |||||||| ||||||||||||||| | | |||| ||||||||||    
T  10306548 acaatacaccaa-aatggtgggaccccttcccggaccctgcgtatgcgggagcttta 10306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 523 - 583
Target Start/End: Complemental strand, 16028683 - 16028624
Alignment:
Q  523 ggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  16028683 ggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 16028624  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 545
Target Start/End: Complemental strand, 39079827 - 39079788
Alignment:
Q  505 gtacaatacaccaataatggtggaaccccttcccggaccat 545  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  39079827 gtacaatacaccaa-aatggtgggaccccttcccggaccat 39079788  T

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Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 18944710 - 18944804
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  18944710 aacagggtaaggctgcgtacaatacaccaacaatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgcccttt 18944804  T

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Target: chr1; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 30395819 - 30395726
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||   |||||| ||||||||| |||||||||  |||||||||    
T  30395819 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttt-agtgcaccgagttgcccttt 30395726  T

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Target: chr1; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 42304300 - 42304207
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||  |||||||||||||| || |||||||| ||||||||||||||| | | |||||||||||||| ||||||||||||||||||||    
T  42304300 aacagggtaaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagcttt-agtgcaccggattgcccttt 42304207  T

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Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 35253278 - 35253187
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| ||||||| | ||||||||||||||||||||    
T  35253278 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccggattgcccttt 35253187  T

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Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 20004183 - 20004090
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||||||| ||||   |||||| ||||||||| |||||||||| |||||||||    
T  20004183 aacaaggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttt-agtgcaccgggttgcccttt 20004090  T

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Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 584
Target Start/End: Original strand, 4349705 - 4349797
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| ||||||||||    
T  4349705 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttta 4349797  T

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Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 38478373 - 38478282
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||| |||||| | |||||| ||||||| | |||||||||| |||||||||    
T  38478373 aacagggtaaggctgcgtacaatacacca--aatggtggaaccccttctcggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 38478282  T

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Target: chr1; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 46248044 - 46247953
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||||||||||| | | |||| ||||||||| |||| ||||| |||||||||    
T  46248044 aacagggtaagactgcgtacaatacacca--aatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgtaccgggttgcccttt 46247953  T

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Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 10668292 - 10668385
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| ||||||  |||||||||||||||||||||||||| |||||||||||| || | | |||| ||||||||| |||||||||| |||||||||    
T  10668292 aacaaggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggtccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 10668385  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 489 - 563
Target Start/End: Original strand, 27201714 - 27201788
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| | | |||| ||||||||||    
T  27201714 aacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccttgcgtatgcgggagcttta 27201788  T

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Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 35005190 - 35005283
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||| ||||||||||||| |||||||| ||||||||||||||| | | |||| ||| ||||| |||||||||| |||||||||    
T  35005190 aacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggcgcttt-agtgcaccgggttgcccttt 35005283  T

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Target: chr1; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 34725189 - 34725098
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||| ||  ||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  34725189 aacagggtaaggctgcgtacaatacactaa--atggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 34725098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 508 - 583
Target Start/End: Original strand, 50606487 - 50606561
Alignment:
Q  508 caatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||| ||||||||||||||| | |||||| ||||||||| |||||||||| |||||||||    
T  50606487 caatacaccaaaaatggtgggaccccttcccggaccctgcatatgcgggagcttt-agtgcaccgggttgcccttt 50606561  T

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Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 18742050 - 18741957
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||| |||| | | |||| | ||||||| |||||||||| || ||||||    
T  18742050 aacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgcgagagcttt-agtgcaccgggtttcccttt 18741957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 19932846 - 19932792
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  19932846 aacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggacc 19932792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 580
Target Start/End: Original strand, 46991871 - 46991959
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccc 580  Q
    ||||||||||| ||| |||||||||||| |  ||||||| ||||||||||||||| | | |||||||||||||| |||||||||| ||||||    
T  46991871 aacagggtaaggctgtgtacaatacaccga--atggtgggaccccttcccggaccctgcgtatgtgggagcttt-agtgcaccgggttgccc 46991959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 19414504 - 19414595
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||| |||| |||||||||||||||||  |||||||| ||||||||||| ||| | |||||| ||||||| | |||||||||| |||||||||    
T  19414504 aacaggttaaggctgcgtacaatacacca--aatggtgggaccccttcccgtaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 19414595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 573
Target Start/End: Complemental strand, 10378826 - 10378745
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccgg 573  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||  ||||| | |||||| ||||||||| ||||||||||    
T  10378826 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcttggaccctgcatatgcgggagcttt-agtgcaccgg 10378745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 487 - 583
Target Start/End: Original strand, 14617103 - 14617196
Alignment:
Q  487 ataacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||| ||||||  |||||||||||||||||  ||||||| | ||||||||||||| | |||||| ||||||||| |||||||||| || ||||||    
T  14617103 ataacaaggtaaggttgcgtacaatacaccaa--atggtgggatcccttcccggaccctgcatatgcgggagcttt-agtgcaccgggttacccttt 14617196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 562
Target Start/End: Original strand, 15505632 - 15505702
Alignment:
Q  490 acagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||| ||| | | |||| |||||||||    
T  15505632 acagggtaagactgcgtacaatacacca--aatggtgggaccccttcccgaaccctgcgtatgcgggagcttt 15505702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 560
Target Start/End: Complemental strand, 12126928 - 12126859
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagct 560  Q
    ||||||||||| |||||||||||||||||  ||| |||| ||||||||||||||| | |||||| |||||||    
T  12126928 aacagggtaaggctgcgtacaatacacca--aattgtgggaccccttcccggaccctgcatatgcgggagct 12126859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 520 - 583
Target Start/End: Original strand, 27474376 - 27474438
Alignment:
Q  520 aatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||| ||||||||||||||| | | |||| ||||||||| ||||||||||||||||||||    
T  27474376 aatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccggattgcccttt 27474438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 563
Target Start/End: Complemental strand, 31382305 - 31382233
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||| |||| |||||||||||||||||  |||||||| ||||||||| ||||| | |||||| ||||||||||    
T  31382305 aacaggataaggctgcgtacaatacacca--aatggtgggaccccttcctggaccctgcatatgcgggagcttta 31382233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 41319897 - 41319806
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||| ||| ||||||||||| ||| | |||||| ||||| ||| ||||||| || |||||||||    
T  41319897 aacagggtaaggctgcgtacaatacacca--aatgatgggaccccttcccgaacccttcatatgcgggag-tttcagtgcactgggttgcccttt 41319806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 47214576 - 47214667
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||  ||||||||||||||||  |||||||| |||||||||| |||| | |||||| ||||||| | |||||||| |||| ||||||    
T  47214576 aacagggtaaggttgcgtacaatacacca--aatggtgggaccccttcccagaccctgcatatgcgggagctct-agtgcaccagattacccttt 47214667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 18724636 - 18724565
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    ||||||||||| ||| ||||||||||||||  ||  ||| ||||||||||||||| |||||||| |||||||||    
T  18724636 aacagggtaaggctgtgtacaatacaccaa--atcttgggaccccttcccggaccctacatatgcgggagcttt 18724565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 578
Target Start/End: Complemental strand, 23768411 - 23768325
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgc 578  Q
    ||||||||||| |||||||||||||||||  |||||||| || ||||||| |||| | | |||| ||||||||| |||||| ||||||||    
T  23768411 aacagggtaaggctgcgtacaatacacca--aatggtgggacaccttcccagaccctgcgtatgcgggagcttt-agtgcagcggattgc 23768325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 542
Target Start/End: Complemental strand, 31442481 - 31442429
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggac 542  Q
    |||||||||||  ||||||||||||||||| |||||||| ||||||||||||||    
T  31442481 aacagggtaaggatgcgtacaatacaccaa-aatggtgggaccccttcccggac 31442429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 561
Target Start/End: Complemental strand, 32632648 - 32632578
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctt 561  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||  ||| | |||||| ||||||||    
T  32632648 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccaaaccctgcatatgcgggagctt 32632578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 543
Target Start/End: Complemental strand, 35117858 - 35117805
Alignment:
Q  490 acagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    |||||||||| ||| |||||||||||||| |||| ||| |||||||||||||||    
T  35117858 acagggtaaggctgtgtacaatacaccaaaaatgatgggaccccttcccggacc 35117805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 543
Target Start/End: Original strand, 20036291 - 20036340
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    ||||||||| ||||| |||||||||||  |||||||||||||||||||||||    
T  20036291 agggtaagattgcgttcaatacaccaa--atggtggaaccccttcccggacc 20036340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 501 - 580
Target Start/End: Original strand, 45402175 - 45402251
Alignment:
Q  501 ctgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccc 580  Q
    |||||||||||||||||  |||||||| |||||||||| |||| | | |||| ||||||||| |||||||||| ||||||    
T  45402175 ctgcgtacaatacacca--aatggtgggaccccttcccagaccctgcgtatgcgggagcttt-agtgcaccgggttgccc 45402251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 583
Target Start/End: Complemental strand, 2435875 - 2435786
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||| |||||||||||||||||| |||||||| ||||||| ||| ||| | |  ||| ||||||||| ||||||||||| | ||||||    
T  2435875 agggtaagcctgcgtacaatacaccaa-aatggtgggacccctttccgtaccctccgcatgcgggagcttt-agtgcaccggactccccttt 2435786  T

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Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 43768206 - 43768297
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||| ||||||||||||||  |||||| |||||||||| |||| | | |||  ||||||||||| ||||||||  ||||||||    
T  43768206 aacagggtaaggctgcctacaatacaccaat--tggtgggaccccttcccagaccctgcgtatacgggagctttaa-tgcaccgggctgcccttt 43768297  T

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Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 11596579 - 11596650
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    ||||||||||| ||||||| |||||||||  |||||||| ||||||||| ||||| | | |||| |||||||||    
T  11596579 aacagggtaaggctgcgtataatacacca--aatggtgggaccccttcctggaccctgcgtatgcgggagcttt 11596650  T

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Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 539
Target Start/End: Original strand, 22324959 - 22325009
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccg 539  Q
    ||||||||||| |||| ||||||||||||| ||||||||| |||| |||||    
T  22324959 aacagggtaaggctgcatacaatacaccaaaaatggtggagccccgtcccg 22325009  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 527
Target Start/End: Original strand, 46859133 - 46859170
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtgg 527  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  46859133 aacagggtaagactgcgtacaatacaccaa-aatggtgg 46859170  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 518
Target Start/End: Complemental strand, 4430117 - 4430088
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaa 518  Q
    ||||||||||||||||||||||||||||||    
T  4430117 aacagggtaagactgcgtacaatacaccaa 4430088  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 562
Target Start/End: Complemental strand, 44485195 - 44485129
Alignment:
Q  494 ggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    |||||| |||||||||||||||||  |||||| | ||||||||||||| | ||| |||| |||||||||    
T  44485195 ggtaaggctgcgtacaatacacca--aatggttggaccccttcccggatcctacgtatgcgggagcttt 44485129  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 583
Target Start/End: Complemental strand, 1517395 - 1517311
Alignment:
Q  496 taagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| |||||||||||||||||||  |||||| |||||||| | |||| | | ||||  |||||||| |||||||||| |||||||||    
T  1517395 taaggctgcgtacaatacaccaat--tggtgggaccccttctcagaccctgcgtatgcaggagcttt-agtgcaccgggttgcccttt 1517311  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 579
Target Start/End: Complemental strand, 45812625 - 45812541
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcc 579  Q
    |||||||| |||| ||||||||||||  |||||||| ||||||||||  ||| | |||||| ||||||| | |||||||||| |||||    
T  45812625 agggtaaggctgcatacaatacacca--aatggtgggaccccttcccaaaccctgcatatgcgggagctct-agtgcaccgggttgcc 45812541  T

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Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 489 - 585
Target Start/End: Original strand, 16225063 - 16225158
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttat 585  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||   |||||| ||||||||| |||||||||| ||| |||||||    
T  16225063 aacagggtaagactgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagcttt-agtgcaccgggttgtcctttat 16225158  T

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Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 20869967 - 20870060
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||   |||||| ||||||||| |||||||||| |||||||||    
T  20869967 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggagcttt-agtgcaccgggttgcccttt 20870060  T

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Target: chr8; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 491 - 583
Target Start/End: Complemental strand, 7136618 - 7136527
Alignment:
Q  491 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||   |||||| ||||||||| |||||||||| || ||||||    
T  7136618 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttt-agtgcaccgggttacccttt 7136527  T

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Target: chr8; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 6760866 - 6760959
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| || |||||||||||||||||||||||| |||||||| ||||||   |||||| ||||||||| |||||||||| |||||||||    
T  6760866 aacagggtaaggcttcgtacaatacaccaataatggtgggaccccttctcggaccccgcatatgcgggagcttt-agtgcaccgggttgcccttt 6760959  T

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Target: chr8; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 26954177 - 26954270
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||   |||||| ||||||||| ||||||| || |||||||||    
T  26954177 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccagacctcgcatatgcgggagcttt-agtgcactgggttgcccttt 26954270  T

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Target: chr8; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 39461087 - 39460994
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  39461087 aacagagtaaggctgcgtacaatacaccaataatggtgagaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 39460994  T

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Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 491 - 578
Target Start/End: Original strand, 5689677 - 5689761
Alignment:
Q  491 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgc 578  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||| ||||| | |||||||||||||| |||||||||| ||||    
T  5689677 cagggtaaggctgcgtacaatacaccaa--atggtggaaccccttcccgaaccatgcgtatgtgggagcttt-agtgcaccggtttgc 5689761  T

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Target: chr8; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 492 - 573
Target Start/End: Complemental strand, 20284159 - 20284079
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccgg 573  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||| | | |||| ||||| ||| ||||||||||    
T  20284159 agggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag-ttttagtgcaccgg 20284079  T

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Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 492 - 573
Target Start/End: Complemental strand, 21070787 - 21070707
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccgg 573  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||| | | |||| ||||| ||| ||||||||||    
T  21070787 agggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag-ttttagtgcaccgg 21070707  T

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Target: chr8; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 2626566 - 2626657
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||||||||||||||||||||  |||| ||| |||||||||| |||| | |||||| |||||| || |||||||| |||||||||||    
T  2626566 aacagggtaagactgcgtacaatacacca--aatgatgggaccccttcccagaccctgcatatgcgggagc-ttcagtgcaccagattgcccttt 2626657  T

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Target: chr8; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 12625934 - 12626025
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||||||| ||||||||||||  |||||||| ||||| ||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  12625934 aacagggtaagactgcatacaatacacca--aatggtgggaccccctcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 12626025  T

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Target: chr8; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 12670341 - 12670250
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| || ||||||    
T  12670341 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttacccttt 12670250  T

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Target: chr8; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 492 - 583
Target Start/End: Original strand, 25250569 - 25250659
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||| | ||||||||||||||||||||||||||| ||||||||||| |||   |||||| ||||| ||| |||||||||| |||||||||    
T  25250569 agggtatggctgcgtacaatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagattt-agtgcaccgggttgcccttt 25250659  T

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Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 584
Target Start/End: Original strand, 17823622 - 17823712
Alignment:
Q  491 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    |||| |||||||||||| ||||||||||  ||||||||||||||||||| ||| | ||||||  |||||||| |||||||||| ||||||||||    
T  17823622 caggataagactgcgtaaaatacaccaa--atggtggaaccccttcccgaaccctgcatatgcaggagcttt-agtgcaccgggttgcccttta 17823712  T

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Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 582
Target Start/End: Original strand, 45071308 - 45071398
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctt 582  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | | |||| |||||| || |||||||||| ||||||||    
T  45071308 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccttgcgtatgcgggagc-ttcagtgcaccgggttgccctt 45071398  T

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Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 584
Target Start/End: Original strand, 13160745 - 13160837
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | | |||| |||||| || ||||| |||| ||||||||||    
T  13160745 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcgtatgcgggagc-ttcagtgcgccgggttgcccttta 13160837  T

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Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 19729384 - 19729475
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||| |||||||||||||  |||||||| ||||||||||||||| | |||||  ||||||| | ||||||| ||||||||||||    
T  19729384 aacagggtaaggctgtgtacaatacacca--aatggtgggaccccttcccggaccctgcatatacgggagctct-agtgcactggattgcccttt 19729475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 28817717 - 28817626
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||| |  ||||||| ||||||||||||||| | | |||| ||||||||| |||||| ||| |||||||||    
T  28817717 aacagggtaaggctgcgtacaatacaccca--atggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcatcgggttgcccttt 28817626  T

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Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 30454188 - 30454097
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| |||||| |||||||| |||||||||  ||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  30454188 aacaaggtaaggctgcgtacgatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 30454097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 35261723 - 35261814
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||  ||||||||||||||||  |||||||| ||||||||| ||||| | | |||| ||||||||| |||||||||| |||||||||    
T  35261723 aacagggtaaggttgcgtacaatacacca--aatggtgggaccccttcctggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 35261814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 36720840 - 36720931
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | | |||| || |||||| |||||||| | |||||||||    
T  36720840 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcgtatgcggaagcttt-agtgcacccggttgcccttt 36720931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 44530193 - 44530284
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||| ||||| | | |||| ||||||||| |||||||||| ||| |||||    
T  44530193 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcctggaccctgcgtatgcgggagcttt-agtgcaccgggttgaccttt 44530284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 538
Target Start/End: Original strand, 43942368 - 43942417
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttccc 538  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  43942368 aacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttccc 43942417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 492 - 563
Target Start/End: Complemental strand, 8897852 - 8897783
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||| || |||||||||||||||  ||||||| ||||||||||||||| | |||||| ||||||||||    
T  8897852 agggtaaggctacgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagcttta 8897783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 562
Target Start/End: Complemental strand, 24365148 - 24365079
Alignment:
Q  491 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    ||||||||| ||||| ||||||||||||  ||||||| ||||||||||||||| | | ||||||||||||||    
T  24365148 cagggtaaggctgcgaacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgtgggagcttt 24365079  T

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Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 10857873 - 10857964
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||||| |||||||||||||  |||||| ||| ||||| ||||| | | |||| ||||||||| |||||||||| |||||||||    
T  10857873 aacagggtaaggctgcgcacaatacaccaat--tggtgggaccacttcctggaccttgcgtatgcgggagcttt-agtgcaccgggttgcccttt 10857964  T

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Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 29877138 - 29877190
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    ||||||||||| |||||||||||||||||  |||||||| |||||||||||||||    
T  29877138 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggacc 29877190  T

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Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 573
Target Start/End: Complemental strand, 44742610 - 44742528
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccgg 573  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||  ||||| |||  ||| |||||| || ||||||||||    
T  44742610 aacagggtaaggctgcgtacaatacaccaa-aatggtgggaccccttcttggaccctacggatgcgggagcatt-agtgcaccgg 44742528  T

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Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 583
Target Start/End: Original strand, 28407476 - 28407538
Alignment:
Q  520 aatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||| | |||||||| |||||||||    
T  28407476 aatggtgggaccccttcccggaccctacgtatgcgggagcttt-actgcaccgggttgcccttt 28407538  T

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Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 29521776 - 29521685
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| | ||| |||| |||| | | |||| ||||||||| |||||||||| |||| ||||    
T  29521776 aacagggtaaggctgcgtacaatacacca--aatggtgggaacccatcccagaccctgcgtatgcgggagcttt-agtgcaccgggttgctcttt 29521685  T

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Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 539
Target Start/End: Complemental strand, 17250968 - 17250918
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccg 539  Q
    |||||| |||| | ||||||||||||||||||||||||| |||| ||||||    
T  17250968 aacaggttaaggcagcgtacaatacaccaataatggtgggaccctttcccg 17250918  T

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Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 583
Target Start/End: Original strand, 26102578 - 26102652
Alignment:
Q  506 tacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||||  ||||||| ||||||||||||||| | | |||| ||||||| | |||||||||| |||||||||    
T  26102578 tacaatacaccaa--atggtgggaccccttcccggaccctgcttatgcgggagctct-agtgcaccgggttgcccttt 26102652  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 583
Target Start/End: Complemental strand, 5135377 - 5135290
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||| ||| ||||||||||||||  ||||||| ||||||||||||||| | | ||||  ||||||||  |||||||||  ||||||||    
T  5135377 agggtaaggctgtgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcaggagcttt--gtgcaccgggctgcccttt 5135290  T

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Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 583
Target Start/End: Original strand, 16013511 - 16013591
Alignment:
Q  502 tgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||||| || |||||||  |||||||||| |||| | | |||| ||||||||| |||||||||| ||| |||||    
T  16013511 tgcgtacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagcttt-agtgcaccgggttgtccttt 16013591  T

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Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 563
Target Start/End: Complemental strand, 44781596 - 44781523
Alignment:
Q  490 acagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||||| ||| |||||||||||||| |||| ||| ||||| |||| |||| | | |||| ||||||||||    
T  44781596 acagggtaaggctgtgtacaatacaccaaaaatgttgggaccccgtcccagaccctgcgtatgcgggagcttta 44781523  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 563
Target Start/End: Original strand, 24245489 - 24245565
Alignment:
Q  488 taacagggtaagactgcgtacaatacacc-aataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    ||||||||||||||| |||||||| |||| || ||| |||| ||||||||| ||||| | | |||| ||||||||||    
T  24245489 taacagggtaagactacgtacaatgcaccaaaaaattgtgggaccccttcctggaccctgcgtatgcgggagcttta 24245565  T

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Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 489 - 585
Target Start/End: Original strand, 47716503 - 47716598
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttat 585  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||   |||||| |||||||||  ||||||||| |||||||||||    
T  47716503 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttt-ggtgcaccgggttgccctttat 47716598  T

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Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 42805568 - 42805661
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||   |||||| ||||||||| |||||||||| |||||||||    
T  42805568 aacagggtaaggctgtgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttt-agtgcaccgggttgcccttt 42805661  T

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Target: chr7; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 43557516 - 43557610
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||| ||||||||  | | |||| ||||||||| |||||||||| |||||||||    
T  43557516 aacagagtaaggctgcgtacaatacaccaataatggtgggaccccctcccggactctgcgtatgcgggagcttttagtgcaccgggttgcccttt 43557610  T

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Target: chr7; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 492 - 583
Target Start/End: Original strand, 19265861 - 19265948
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||| |||||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||  ||||||||    
T  19265861 agggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggacc-tacatatgtgggagcttt-agtgcaccgggctgcccttt 19265948  T

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Target: chr7; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 21172100 - 21172009
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  21172100 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 21172009  T

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Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 42391191 - 42391100
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  42391191 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 42391100  T

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Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 46354238 - 46354292
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  46354238 aacagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggacc 46354292  T

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Target: chr7; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 489 - 585
Target Start/End: Complemental strand, 48735213 - 48735120
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttat 585  Q
    |||| |||||| ||||||||||||||||||  ||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||||    
T  48735213 aacacggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgccctttat 48735120  T

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Target: chr7; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 32758303 - 32758394
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||| ||||||||||||||  ||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  32758303 aacagggtaaggctgtgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 32758394  T

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Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 492 - 584
Target Start/End: Complemental strand, 10693161 - 10693072
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    |||||||| ||||||||||||||||||  ||||||| ||||||||||||||| | |||||| ||||||| | ||||||| || ||||||||||    
T  10693161 agggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcactgggttgcccttta 10693072  T

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Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 489 - 573
Target Start/End: Original strand, 38604570 - 38604652
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccgg 573  Q
    ||||||||||| |||||||||||||||||  |||||||  ||||||| ||||||| | | |||| ||||||||||||||||||||    
T  38604570 aacagggtaaggctgcgtacaatacacca--aatggtgagacccctttccggaccctgcgtatgcgggagctttaagtgcaccgg 38604652  T

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Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 7879682 - 7879773
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| |||||| |||||||||||||||||  |||||||| ||||||||||||||| | | |||| |||||| || |||||||||| |||||||||    
T  7879682 aacaaggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcgtatgcgggagc-ttcagtgcaccgggttgcccttt 7879773  T

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Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 11617679 - 11617589
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctt 582  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||||| ||||| | | ||||  ||| |||| |||||||||| ||||||||    
T  11617679 aacagggtaagactgcgtacaatacacca--aatggtgggaccccttcctggaccctgcgtatgcaggaccttt-agtgcaccgggttgccctt 11617589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 33500557 - 33500611
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    |||||||||||||||||||| |||||| || |||||||| |||||||||||||||    
T  33500557 aacagggtaagactgcgtactatacacaaaaaatggtgggaccccttcccggacc 33500611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 489 - 585
Target Start/End: Complemental strand, 22699061 - 22698965
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccc-cttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttat 585  Q
    |||||||||||||||||||||||||||||| |||||||| ||||  |||||||||| |   |||| ||||||| | |||||||||| || ||||||||    
T  22699061 aacagggtaagactgcgtacaatacaccaaaaatggtgggacccttttcccggaccctgtgtatgcgggagctat-agtgcaccgggttaccctttat 22698965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 562
Target Start/End: Complemental strand, 28362231 - 28362165
Alignment:
Q  494 ggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    |||||| ||||||||||||||||||  ||||||| |||||||||| |||| | ||||||||||||||||    
T  28362231 ggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccagaccttgcatatgtgggagcttt 28362165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 584
Target Start/End: Complemental strand, 2541110 - 2541018
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    ||||||||||| |||||||| ||||||||  |||||||| |||||||||||| || | | |||| ||||||||| |||||||||| || |||||||    
T  2541110 aacagggtaaggctgcgtactatacacca--aatggtgggaccccttcccggtccctgcgtatgcgggagcttt-agtgcaccgggtttcccttta 2541018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 497 - 573
Target Start/End: Original strand, 21566487 - 21566561
Alignment:
Q  497 aagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccgg 573  Q
    |||||||||||||||||||||| |||||| | ||||||||||| ||| | |||||| ||||||||| ||||||||||    
T  21566487 aagactgcgtacaatacaccaa-aatggtaggaccccttcccgaaccctgcatatgcgggagcttt-agtgcaccgg 21566561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 31591200 - 31591109
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||| ||||| ||||||||||||||  ||  ||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  31591200 aacagagtaaggctgcgtacaatacaataa--atggtgggaccccttcccggaccttgcatatgcgggagctct-agtgcaccgggttgcccttt 31591109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 42798713 - 42798804
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| |||||| |||||||||||||||||  |||||||| |||| |||||||||| | |||||| ||||||| | |||||| ||| |||||||||    
T  42798713 aacaaggtaaggctgcgtacaatacacca--aatggtgggaccctttcccggaccctgcatatgcgggagctat-agtgcatcgggttgcccttt 42798804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 14732913 - 14732821
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||| ||||||||||| ||||||| ||| |||||||| ||| |   |||| ||||||||| |||||||||||||| |||||    
T  14732913 aacagggtaaggctgcgt-caatacaccaaaaatggtgaaactccttcccgaaccctgtttatgcgggagcttt-agtgcaccggattgtccttt 14732821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 563
Target Start/End: Complemental strand, 17048907 - 17048834
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||||||  | ||||||||||||||| |||||||||||||||||||||| | | | ||||| |||||||||    
T  17048907 aacagggtaaggttacgtacaatacaccaa-aatggtggaaccccttcccggaacttgcttatgtaggagcttta 17048834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 537
Target Start/End: Complemental strand, 23419765 - 23419719
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcc 537  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||    
T  23419765 aacagggtaagactgcgtacaatacacca--aatggtgggaccccttcc 23419719  T

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Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 573
Target Start/End: Complemental strand, 35334907 - 35334826
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccgg 573  Q
    ||||||||||||||| ||||||||||||   |||||||| ||||||||||||||| | | ||||  |||||||| ||||||||||    
T  35334907 aacagggtaagactgtgtacaatacacc--gaatggtgggaccccttcccggaccctgcgtatgcaggagcttt-agtgcaccgg 35334826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 501 - 562
Target Start/End: Original strand, 39123949 - 39124010
Alignment:
Q  501 ctgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    ||||||| |||||||||| |||||||| ||||||||||||||| | | |||| |||||||||    
T  39123949 ctgcgtaaaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgagggagcttt 39124010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 501 - 583
Target Start/End: Complemental strand, 45019006 - 45018923
Alignment:
Q  501 ctgcgtacaatacaccaataa--tggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||| ||||| ||  |||||||||||||||||||||| | | |||| ||||||||| |||||||| | |||||||||    
T  45019006 ctgcgtacaatataccaaaaaactggtggaaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccaggttgcccttt 45018923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 552
Target Start/End: Complemental strand, 14099097 - 14099036
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatg 552  Q
    |||||| ||||||||||||||||||||||  |||||||| ||||||||||| ||| ||| ||||    
T  14099097 aacaggttaagactgcgtacaatacacca--aatggtgggaccccttcccgaaccctacgtatg 14099036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 489 - 552
Target Start/End: Complemental strand, 14409114 - 14409053
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatg 552  Q
    |||||| ||||||||||||||||||||||  |||||||| ||||||||||| ||| ||| ||||    
T  14409114 aacaggttaagactgcgtacaatacacca--aatggtgggaccccttcccgaaccctacgtatg 14409053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 583
Target Start/End: Complemental strand, 19426977 - 19426890
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||||||||||||||||||  |||||||| | |||||| |||||| | |||||| | |||| || |||||||||| |||||||||    
T  19426977 agggtaagactgcgtacaatacacca--aatggtggga-cccttctcggaccctgcatatgcgagagc-ttcagtgcaccgggttgcccttt 19426890  T

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Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 558
Target Start/End: Complemental strand, 48123577 - 48123508
Alignment:
Q  487 ataacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggag 558  Q
    |||||||||||| ||||| ||||||||||||  |||||||| ||||||| | ||||||| |||||| |||||    
T  48123577 ataacagggtaaaactgcatacaatacacca--aatggtgggacccctttctggaccatgcatatgcgggag 48123508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 562
Target Start/End: Complemental strand, 18512541 - 18512473
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    |||||||| |||||||||||||||| |  ||||||| ||||||||||||||| | | |||| |||||||||    
T  18512541 agggtaaggctgcgtacaatacaccga--atggtgggaccccttcccggaccctgcgtatgcgggagcttt 18512473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 27629678 - 27629769
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||  |||||| |||||||||  |||||||| |||||||||||| || | |||||| || ||| || |||||||||| |||||||||    
T  27629678 aacagggtaaggttgcgtaaaatacacca--aatggtgggaccccttcccgggccctgcatatgcggtagc-ttcagtgcaccgggttgcccttt 27629769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 583
Target Start/End: Complemental strand, 27889395 - 27889316
Alignment:
Q  501 ctgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||||||||||  ||||||| ||||||||||||||| | | |||| |||||||||  || |||||| |||||||||    
T  27889395 ctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagcttt-ggtacaccgggttgcccttt 27889316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 563
Target Start/End: Complemental strand, 34626299 - 34626227
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    ||||||||||| |||||| ||||||||||  |||||||| | ||||||||||||| | | |||| ||||||||||    
T  34626299 aacagggtaaggctgcgttcaatacacca--aatggtgggatcccttcccggaccctgcgtatgcgggagcttta 34626227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 564
Target Start/End: Original strand, 35203483 - 35203558
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaa 564  Q
    |||||| ||||||||||||||||| ||||| |||||||| | ||||||| | ||  ||| |||| |||||||||||    
T  35203483 aacaggataagactgcgtacaatataccaaaaatggtgggatcccttcctgaactctacgtatgcgggagctttaa 35203558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 35787360 - 35787269
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| ||||||  |||||||||||||||||  |||| || ||||||||||||||| | | |||| |||||||| || |||||||| |||||||||    
T  35787360 aacatggtaaggttgcgtacaatacaccaa--atggcgggaccccttcccggaccttgcgtatgcgggagcttcaa-tgcaccgggttgcccttt 35787269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 39093531 - 39093439
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||||||| |||||||||||| ||||| |||| | ||||||||||| | | ||||||  | |||||| ||||||||||  ||||||||    
T  39093531 aacagggtaagactgtgtacaatacacc-ataatagtgggaacccttcccggaacttgcatatgcagaagcttt-agtgcaccgggctgcccttt 39093439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 579
Target Start/End: Complemental strand, 47077933 - 47077859
Alignment:
Q  502 tgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcc 579  Q
    |||||||||||||| ||  ||||||| ||||||||||  ||| |||||||| ||||||| || |||||||||||||||    
T  47077933 tgcgtacaatacacaaa--atggtgggaccccttcccaaaccctacatatgcgggagctcta-gtgcaccggattgcc 47077859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 562
Target Start/End: Original strand, 16341322 - 16341394
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    ||||||||||| || ||||||||||||||| ||||||||  || |||||||||||   |||||| |||||||||    
T  16341322 aacagggtaaggctacgtacaatacaccaa-aatggtgggccctcttcccggacctatcatatgcgggagcttt 16341394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 489 - 561
Target Start/End: Original strand, 19266494 - 19266564
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctt 561  Q
    ||||||||||| |||||||||||||||||  ||| |||| | ||||||||||||| | | |||| ||||||||    
T  19266494 aacagggtaaggctgcgtacaatacacca--aattgtgggatcccttcccggaccctgcgtatgcgggagctt 19266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 582
Target Start/End: Original strand, 18747533 - 18747621
Alignment:
Q  491 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctt 582  Q
    ||||||||| ||||||| |||||||||||  |||||| ||||||||| | ||| | | |||| ||||||||| ||||||||||  |||||||    
T  18747533 cagggtaaggctgcgtataatacaccaat--tggtgggaccccttcctgaaccctgcgtatgcgggagcttt-agtgcaccgggctgccctt 18747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 582
Target Start/End: Original strand, 29907469 - 29907552
Alignment:
Q  495 gtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctt 582  Q
    ||||| |||||| ||||||||||| |||||||| ||||| ||||||||| |   |||| ||||||||| |||||||||| ||||||||    
T  29907469 gtaaggctgcgttcaatacaccaa-aatggtgggaccccatcccggaccct--gtatgcgggagcttt-agtgcaccgggttgccctt 29907552  T

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Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 489 - 585
Target Start/End: Original strand, 14530362 - 14530457
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttat 585  Q
    ||||||||||| || |||||||||||||||||||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||||    
T  14530362 aacagggtaaggctacgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgccctttat 14530457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 10543742 - 10543835
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  10543742 aacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 10543835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 9671223 - 9671314
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  9671223 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 9671314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 10546207 - 10546298
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  10546207 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 10546298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 24200716 - 24200623
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||| |||||||| | ||||||||||||| |   |||||| ||||||| |||||||||| |||||||||    
T  24200716 aacagggtaaggctgcgtacaatacaccaaaaatggtgggaacccttcccggaccctgagtatgtgagagcttt-agtgcaccgggttgcccttt 24200623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 518 - 583
Target Start/End: Original strand, 1289093 - 1289158
Alignment:
Q  518 ataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||| ||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||||    
T  1289093 ataatggtgggaccccttcccggatcatgcatatgcgggagcttttagtgcaccggattgcccttt 1289158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 492 - 583
Target Start/End: Original strand, 5841075 - 5841165
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||  ||||||||||||| |||||||||||| |||||||||||||||   |||||| ||||||||| |||||||||  |||||||||    
T  5841075 agggtaaggatgcgtacaatacatcaataatggtgggaccccttcccggaccccgcatatgcgggagcttt-agtgcaccgagttgcccttt 5841165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 21779352 - 21779261
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||||  |||||||||||||||||  ||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  21779352 aacagggtaaggttgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 21779261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 492 - 586
Target Start/End: Original strand, 23397811 - 23397902
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttatc 586  Q
    |||||||| || ||||||||||||||  |||||||| |||||||| |||||| |||||||| ||||||| | |||||||||| ||||||||||||    
T  23397811 agggtaaggctacgtacaatacacca--aatggtgggaccccttctcggaccctacatatgcgggagctct-agtgcaccgggttgccctttatc 23397902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 36871536 - 36871626
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  36871536 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggacc-tgcgtatgcgggagcttt-agtgcaccgggttgcccttt 36871626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 583
Target Start/End: Complemental strand, 8455406 - 8455316
Alignment:
Q  490 acagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | | ||||  |||||||| |||||||||| |||||||||    
T  8455406 acagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcgtatgccggagcttt-agtgcaccgggttgcccttt 8455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 491 - 583
Target Start/End: Original strand, 17668048 - 17668137
Alignment:
Q  491 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||| |||||||||||||||||  ||||||||||||||||| || ||| | | ||| |||||||||| |||||||||| |||||||||    
T  17668048 cagggtaaggctgcgtacaatacacca--aatggtggaaccccttctcgaaccctgcgtatatgggagcttt-agtgcaccgggttgcccttt 17668137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 491 - 583
Target Start/End: Original strand, 17623610 - 17623699
Alignment:
Q  491 cagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||| | | | | ||||||| |||||| ||||||| || |||||||||    
T  17623610 cagggtaaggctgcgtacaatacacca--aatggtggaaccccttcccgaatcctgcgtatgtggaagcttt-agtgcactgggttgcccttt 17623699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 492 - 583
Target Start/End: Original strand, 30826083 - 30826170
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||  ||||||||||||||||  |||||||||| |||||||| |||| |||||||| ||||||||| |||||||| ||||| |||||    
T  30826083 agggtaaggttgcgtacaatacacca--aatggtggaa-cccttcccagaccctacatatgcgggagcttt-agtgcaccagattgtccttt 30826170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 14444772 - 14444863
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| ||| |||| |||||||||  ||||||| ||||||||||||||| | | |||| ||||||||| |||||||| | |||||||||    
T  14444772 aacagggtaaggctgtgtacgatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccaggttgcccttt 14444863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 543
Target Start/End: Original strand, 22371098 - 22371150
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    ||||||||||| |||||||||||||||||  |||||||| |||||||||||||||    
T  22371098 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggacc 22371150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 501 - 579
Target Start/End: Complemental strand, 24860067 - 24859992
Alignment:
Q  501 ctgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcc 579  Q
    |||||||||||||||||  |||||| |||||||||| |||||| | | |||| ||||||||| ||||||||||||||||    
T  24860067 ctgcgtacaatacacca--aatggtagaaccccttctcggaccctgcgtatgcgggagcttt-agtgcaccggattgcc 24859992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 25249829 - 25249738
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| | ||||||||| ||| | | |||| | ||||||| |||||||||| |||||||||    
T  25249829 aacagggtaaggctgcgtacaatacacca--aatggtgggatcccttcccgaaccctgcgtatgcgtgagcttt-agtgcaccgggttgcccttt 25249738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 25632553 - 25632644
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||| |||| |||||||||||||||||  |||||||| |  |||||||| ||| ||| |||| ||||||||| |||||||||| |||||||||    
T  25632553 aacaggataaggctgcgtacaatacacca--aatggtgggattccttcccgaaccttacgtatgcgggagcttt-agtgcaccgggttgcccttt 25632644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 543
Target Start/End: Complemental strand, 32781379 - 32781327
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggacc 543  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||| ||||    
T  32781379 aacagggtaagactgcgtacaatacacca--aatggtgggaccccttcccagacc 32781327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 583
Target Start/End: Complemental strand, 40762321 - 40762234
Alignment:
Q  493 gggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||| || |||||||||||||||  ||||||| |||| |||| ||||| | | |||||||||||||| |||||||||| |||||||||    
T  40762321 gggtaaggctacgtacaatacaccaa--atggtgggaccctttcctggaccctgcgtatgtgggagcttt-agtgcaccgggttgcccttt 40762234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 539
Target Start/End: Original strand, 19615036 - 19615085
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccg 539  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  19615036 aacagggtaagactgcgtacaatataccaataatagtgg-accccttcccg 19615085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 489 - 563
Target Start/End: Complemental strand, 31158532 - 31158458
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||||||| ||| ||||||| ||||| |||||||| |||||||||| |||| | | |||| ||||||||||    
T  31158532 aacagggtaagattgcatacaataaaccaaaaatggtgggaccccttcccagaccctgcgtatgcgggagcttta 31158458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 583
Target Start/End: Original strand, 11514486 - 11514570
Alignment:
Q  495 gtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||| |||||||||||||||||  |||||||| | |||||||| |||| | | |||| ||||||||| ||||||||||||||||||||    
T  11514486 gtaaggctgcgtacaatacacca--aatggtggga-cccttcccagaccctgcgtatgcgggagcttt-agtgcaccggattgcccttt 11514570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 573
Target Start/End: Complemental strand, 12024010 - 12023929
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccgg 573  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||| ||||||||| | | ||| ||| |||||||| ||||||||    
T  12024010 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccctcccggaccctgcgtatttggaagctttaa-tgcaccgg 12023929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 586
Target Start/End: Complemental strand, 44449475 - 44449380
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttatc 586  Q
    |||||| |||| |||||||||||||||||| ||| |||| ||||||||||||||| | | | |||||||| ||||| |||||| || ||| |||||||    
T  44449475 aacaggataaggctgcgtacaatacaccaa-aatagtgggaccccttcccggaccctgcgtttgtgggagttttaa-tgcacctgactgctctttatc 44449380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 563
Target Start/End: Original strand, 17896307 - 17896376
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||| |||||||||||| |||||  ||||||| |||||||| |||||| | | |||||||||||||||    
T  17896307 agggtaaggctgcgtacaatataccaa--atggtgggaccccttctcggaccctgcgtatgtgggagcttta 17896376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 583
Target Start/End: Original strand, 23488535 - 23488618
Alignment:
Q  499 gactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||||| |||||||| || |||||||| ||||||||||||||| | | |||| | ||||||| |||||||||| |||| ||||    
T  23488535 gactgcgtgcaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgagagcttt-agtgcaccgggttgctcttt 23488618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 563
Target Start/End: Complemental strand, 4516430 - 4516370
Alignment:
Q  501 ctgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||||||||||||||  |||||| ||||||||||||||| | | ||||||| |||||||    
T  4516430 ctgcgtacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgtggaagcttta 4516370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 563
Target Start/End: Complemental strand, 13245181 - 13245114
Alignment:
Q  494 ggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||| ||||||||| ||||| ||  ||||||| ||||||||||||||||| |||||  ||||||||||    
T  13245181 ggtaaggctgcgtacattacactaa--atggtgggaccccttcccggaccatgcatatacgggagcttta 13245114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 562
Target Start/End: Complemental strand, 21377164 - 21377093
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttt 562  Q
    ||||||||||| ||| ||||||| ||||||  ||||||| ||||||||||| ||| | | ||||||||||||||    
T  21377164 aacagggtaaggctgggtacaatgcaccaa--atggtgggaccccttcccgaaccctgcgtatgtgggagcttt 21377093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 563
Target Start/End: Complemental strand, 19185823 - 19185762
Alignment:
Q  502 tgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    |||||||||| ||| || |||||||||||||||||| ||||| | | |||| ||||||||||    
T  19185823 tgcgtacaatgcacaaaaaatggtggaaccccttcctggaccctgcgtatgcgggagcttta 19185762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 522 - 583
Target Start/End: Original strand, 34080176 - 34080236
Alignment:
Q  522 tggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||||| ||||||||||||||| | |||||| ||||| ||| |||||||||| |||||||||    
T  34080176 tggtgggaccccttcccggaccctgcatatgcgggag-ttttagtgcaccgggttgcccttt 34080236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 585
Target Start/End: Original strand, 14544108 - 14544203
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttat 585  Q
    |||||||||||||||||| |||||  | || |||||| | ||||||||| ||||| | | |||| ||||||||| ||||||||   |||||||||||    
T  14544108 aacagggtaagactgcgtgcaataaccaaaaaatggtcggaccccttccgggaccctgcgtatgcgggagcttt-agtgcaccaagttgccctttat 14544203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 521 - 581
Target Start/End: Original strand, 41409936 - 41409995
Alignment:
Q  521 atggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccct 581  Q
    ||||||| ||||||||||||||| | |||||| |||||| || |||||||||| |||||||    
T  41409936 atggtgggaccccttcccggaccctgcatatgcgggagc-ttcagtgcaccgggttgccct 41409995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 585
Target Start/End: Original strand, 59021 - 59116
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccctttat 585  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||| |||  | | |||| ||||||||| |||||| ||| |||||||||||    
T  59021 aacagggtaagactgcgtacaatacaccaaaaatggtgggaccccttcccagactctgcgtatgcgggagcttt-agtgcatcgggttgccctttat 59116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 493 - 583
Target Start/End: Complemental strand, 24220 - 24133
Alignment:
Q  493 gggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||| ||||||||||||||||||  ||||||| ||||||||||||||| | |||||| ||||||| | ||||||||||||||||||||    
T  24220 gggtaaggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccggattgcccttt 24133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 48725 - 48634
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  48725 aacagggtaaggctgcgtacaatacacca--aatggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 48634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 30621 - 30712
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||| | ||||||||||||||||||  ||||||| ||||||||||||||| | |||||| ||||||| | |||||||||| |||||||||    
T  30621 aacagggtagggctgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcatatgcgggagctct-agtgcaccgggttgcccttt 30712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 492 - 583
Target Start/End: Original strand, 46878 - 46966
Alignment:
Q  492 agggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    ||||||||  |||||||||||||||||  ||||||| ||||||||||||||| | | |||| ||||||||| |||||||||| |||||||||    
T  46878 agggtaaggttgcgtacaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagcttt-agtgcaccgggttgcccttt 46966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 563
Target Start/End: Complemental strand, 24863 - 24791
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    ||||||||||| |||||||||| ||||||  |||||||| ||||||||||| ||| | | |||| ||||||||||    
T  24863 aacagggtaaggctgcgtacaacacacca--aatggtgggaccccttcccgaaccctgcgtatgcgggagcttta 24791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 581
Target Start/End: Complemental strand, 10141 - 10052
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccct 581  Q
    ||||| |||||||||||||||||||||||  ||| |||| ||||||||||||||| | ||||||  ||||| |  |||||||||| |||||||    
T  10141 aacagagtaagactgcgtacaatacacca--aatagtgggaccccttcccggaccctgcatatgcaggagc-tccagtgcaccgggttgccct 10052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 489 - 581
Target Start/End: Complemental strand, 20469 - 20380
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgccct 581  Q
    ||||| |||||||||||||||||||||||  ||| |||| ||||||||||||||| | ||||||  ||||| |  |||||||||| |||||||    
T  20469 aacagagtaagactgcgtacaatacacca--aatagtgggaccccttcccggaccctgcatatgcaggagc-tccagtgcaccgggttgccct 20380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 563
Target Start/End: Original strand, 10854 - 10926
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagcttta 563  Q
    ||||||||| | |||||| |||||||||||  ||||||| ||||||||||||||| | | |||| ||||||||||    
T  10854 aacagggtagggctgcgtccaatacaccaa--atggtgggaccccttcccggaccctgcgtatgcgggagcttta 10926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 489 - 583
Target Start/End: Complemental strand, 13115 - 13024
Alignment:
Q  489 aacagggtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttt 583  Q
    |||| |||||| ||||||||||||||||   |||||||| |||||||||| |||| | | |||| ||| ||||| |||||||||| |||||||||    
T  13115 aacaaggtaaggctgcgtacaatacacc--gaatggtgggaccccttcccagaccctgcgtatgcgggggcttt-agtgcaccgggttgcccttt 13024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 543
Target Start/End: Original strand, 4214 - 4256
Alignment:
Q  502 tgcgtacaatacaccaataa-tggtggaaccccttcccggacc 543  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  4214 tgcgtacaatacaccaataattggtgggaccccttcccggacc 4256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 584
Target Start/End: Original strand, 11179 - 11265
Alignment:
Q  495 gtaagactgcgtacaatacaccaataatggtggaaccccttcccggaccatacatatgtgggagctttaagtgcaccggattgcccttta 584  Q
    ||||| |||| |||||||||||||  ||||||| || |||||||||||| | |||||| ||||||| | |||||||| | ||||||||||    
T  11179 gtaaggctgcttacaatacaccaa--atggtgggacaccttcccggaccctgcatatgcgggagctct-agtgcaccaggttgcccttta 11265  T

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