View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0532_low_21 (Length: 365)

Name: NF0532_low_21
Description: NF0532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0532_low_21
NF0532_low_21
[»] chr1 (26 HSPs)
chr1 (153-263)||(5180228-5180329)
chr1 (264-331)||(46282071-46282138)
chr1 (262-331)||(49093039-49093108)
chr1 (269-331)||(46282826-46282888)
chr1 (269-331)||(50062981-50063043)
chr1 (260-331)||(32622389-32622460)
chr1 (104-154)||(5180155-5180205)
chr1 (263-329)||(13295615-13295681)
chr1 (269-331)||(32619389-32619451)
chr1 (263-331)||(13295134-13295202)
chr1 (267-331)||(25065991-25066055)
chr1 (264-331)||(51935232-51935299)
chr1 (262-331)||(25064931-25065000)
chr1 (263-331)||(1047521-1047589)
chr1 (263-335)||(12577009-12577081)
chr1 (323-354)||(46282159-46282190)
chr1 (323-354)||(46282774-46282805)
chr1 (323-354)||(49093129-49093160)
chr1 (323-354)||(49093794-49093825)
chr1 (323-354)||(50062291-50062322)
chr1 (323-354)||(50062929-50062960)
chr1 (262-331)||(46364572-46364641)
chr1 (263-331)||(2828192-2828260)
chr1 (263-331)||(24701586-24701654)
chr1 (263-331)||(32238698-32238766)
chr1 (299-331)||(49093846-49093878)
[»] chr8 (29 HSPs)
chr8 (259-331)||(34665765-34665837)
chr8 (263-331)||(34213763-34213831)
chr8 (269-331)||(34666573-34666635)
chr8 (263-331)||(34214561-34214630)
chr8 (259-320)||(1232841-1232902)
chr8 (263-331)||(33497649-33497717)
chr8 (263-331)||(38598963-38599031)
chr8 (260-331)||(25288109-25288180)
chr8 (260-331)||(1231522-1231593)
chr8 (278-331)||(7393178-7393231)
chr8 (263-331)||(4463459-4463527)
chr8 (263-331)||(36623351-36623419)
chr8 (264-331)||(27437552-27437619)
chr8 (263-331)||(25287791-25287859)
chr8 (262-334)||(27857056-27857128)
chr8 (323-359)||(34214504-34214540)
chr8 (262-330)||(43866709-43866777)
chr8 (264-331)||(27436563-27436630)
chr8 (268-331)||(33497020-33497083)
chr8 (323-354)||(34665858-34665889)
chr8 (323-354)||(34666522-34666553)
chr8 (263-330)||(36623671-36623738)
chr8 (265-332)||(37342976-37343043)
chr8 (265-332)||(40525630-40525697)
chr8 (265-332)||(43866834-43866901)
chr8 (264-334)||(23424826-23424896)
chr8 (269-331)||(36576034-36576096)
chr8 (262-331)||(40422477-40422546)
chr8 (263-335)||(41182209-41182281)
[»] chr6 (19 HSPs)
chr6 (263-331)||(4116798-4116866)
chr6 (263-331)||(4117580-4117648)
chr6 (264-331)||(33399966-33400033)
chr6 (262-331)||(33401159-33401228)
chr6 (267-331)||(1661463-1661527)
chr6 (263-331)||(14657242-14657310)
chr6 (263-331)||(14656479-14656547)
chr6 (263-331)||(17784418-17784486)
chr6 (260-331)||(13480204-13480275)
chr6 (278-331)||(8427398-8427451)
chr6 (262-331)||(30234909-30234978)
chr6 (323-354)||(1661411-1661442)
chr6 (323-354)||(14657190-14657221)
chr6 (323-354)||(33400054-33400085)
chr6 (265-331)||(23291745-23291811)
chr6 (262-331)||(5064333-5064402)
chr6 (265-330)||(13480333-13480398)
chr6 (262-331)||(13480525-13480594)
chr6 (263-331)||(15819807-15819875)
[»] chr3 (37 HSPs)
chr3 (260-331)||(2944699-2944770)
chr3 (260-331)||(22736723-22736794)
chr3 (264-331)||(45279317-45279384)
chr3 (269-331)||(48188383-48188445)
chr3 (263-331)||(1757337-1757405)
chr3 (263-331)||(48189132-48189200)
chr3 (264-331)||(11026665-11026732)
chr3 (264-331)||(43105233-43105300)
chr3 (269-331)||(43105867-43105929)
chr3 (263-331)||(29193026-29193094)
chr3 (264-331)||(1756550-1756617)
chr3 (269-331)||(44476054-44476116)
chr3 (269-331)||(45278549-45278611)
chr3 (260-331)||(32717138-32717209)
chr3 (269-331)||(37249204-37249266)
chr3 (259-331)||(2943908-2943980)
chr3 (263-331)||(29192034-29192102)
chr3 (260-331)||(44481986-44482057)
chr3 (269-331)||(37249831-37249892)
chr3 (286-331)||(11025959-11026004)
chr3 (323-359)||(2944642-2944678)
chr3 (260-331)||(1741383-1741454)
chr3 (323-354)||(1756638-1756669)
chr3 (323-354)||(11026025-11026056)
chr3 (265-332)||(21300327-21300394)
chr3 (265-332)||(22129129-22129196)
chr3 (323-354)||(37249779-37249810)
chr3 (323-354)||(45278632-45278663)
chr3 (323-354)||(45279265-45279296)
chr3 (323-354)||(48188466-48188497)
chr3 (323-354)||(48189080-48189111)
chr3 (264-331)||(53037027-53037094)
chr3 (323-353)||(11026614-11026644)
chr3 (323-353)||(43105816-43105846)
chr3 (262-331)||(10749316-10749385)
chr3 (323-351)||(37249287-37249315)
chr3 (263-335)||(40257186-40257258)
[»] chr5 (35 HSPs)
chr5 (262-331)||(20856930-20856999)
chr5 (262-331)||(20072902-20072971)
chr5 (263-331)||(39181056-39181124)
chr5 (264-331)||(20072121-20072188)
chr5 (264-331)||(39181829-39181896)
chr5 (261-331)||(8654104-8654174)
chr5 (257-331)||(22870495-22870569)
chr5 (260-331)||(20857580-20857651)
chr5 (269-331)||(16532898-16532960)
chr5 (269-331)||(36476770-36476832)
chr5 (263-331)||(31107930-31107998)
chr5 (264-331)||(16533658-16533725)
chr5 (269-331)||(21978050-21978112)
chr5 (269-331)||(36477409-36477471)
chr5 (278-331)||(22869619-22869672)
chr5 (263-331)||(14744763-14744831)
chr5 (269-316)||(21972095-21972142)
chr5 (262-331)||(21979004-21979073)
chr5 (262-331)||(32052222-32052291)
chr5 (260-331)||(33735309-33735380)
chr5 (262-334)||(7015506-7015578)
chr5 (323-354)||(16532981-16533012)
chr5 (323-354)||(16533606-16533637)
chr5 (323-354)||(20072209-20072240)
chr5 (323-354)||(20072850-20072881)
chr5 (260-331)||(31108371-31108441)
chr5 (323-354)||(36476853-36476884)
chr5 (323-354)||(39181145-39181176)
chr5 (323-354)||(39181777-39181808)
chr5 (262-331)||(14745446-14745515)
chr5 (262-331)||(25253403-25253472)
chr5 (262-331)||(25317194-25317263)
chr5 (263-331)||(32052541-32052609)
chr5 (323-351)||(36477360-36477388)
chr5 (262-310)||(39402736-39402784)
[»] chr2 (19 HSPs)
chr2 (263-331)||(20982523-20982591)
chr2 (263-331)||(29957816-29957884)
chr2 (260-331)||(20101766-20101837)
chr2 (264-331)||(29958580-29958647)
chr2 (264-331)||(20983294-20983361)
chr2 (258-331)||(25624466-25624539)
chr2 (263-331)||(20103177-20103245)
chr2 (264-331)||(25623288-25623355)
chr2 (261-331)||(24387348-24387418)
chr2 (262-331)||(24388289-24388358)
chr2 (21-70)||(42824078-42824127)
chr2 (266-331)||(21103088-21103148)
chr2 (263-331)||(16366962-16367030)
chr2 (264-331)||(10446832-10446899)
chr2 (323-354)||(20983242-20983273)
chr2 (323-354)||(29957905-29957936)
chr2 (260-331)||(43236500-43236571)
chr2 (264-334)||(20911443-20911513)
chr2 (264-304)||(21370590-21370630)
[»] chr4 (25 HSPs)
chr4 (264-331)||(38813554-38813621)
chr4 (263-331)||(52815662-52815730)
chr4 (263-331)||(52816456-52816524)
chr4 (263-331)||(56556581-56556649)
chr4 (263-333)||(23454953-23455023)
chr4 (263-331)||(38814360-38814428)
chr4 (260-331)||(56557358-56557429)
chr4 (269-331)||(38982629-38982691)
chr4 (263-331)||(23455722-23455790)
chr4 (259-331)||(53477113-53477185)
chr4 (263-331)||(55013122-55013189)
chr4 (264-329)||(54591613-54591678)
chr4 (260-331)||(13336871-13336942)
chr4 (260-330)||(22250051-22250121)
chr4 (263-331)||(53559704-53559772)
chr4 (265-332)||(22249927-22249994)
chr4 (323-354)||(38814308-38814339)
chr4 (323-354)||(52816404-52816435)
chr4 (267-330)||(54590146-54590209)
chr4 (323-354)||(56556670-56556701)
chr4 (323-354)||(56557306-56557337)
chr4 (262-331)||(33294460-33294529)
chr4 (263-331)||(8287250-8287318)
chr4 (263-331)||(9254405-9254473)
chr4 (323-351)||(38982580-38982608)
[»] chr7 (25 HSPs)
chr7 (263-331)||(27480780-27480848)
chr7 (263-331)||(37284108-37284176)
chr7 (263-331)||(37289343-37289411)
chr7 (264-331)||(27479987-27480054)
chr7 (269-331)||(22661362-22661424)
chr7 (262-331)||(4227205-4227274)
chr7 (262-331)||(38643548-38643617)
chr7 (263-331)||(12643099-12643167)
chr7 (259-331)||(12930767-12930839)
chr7 (263-331)||(45915841-45915909)
chr7 (260-331)||(45914522-45914593)
chr7 (259-331)||(12929282-12929354)
chr7 (260-331)||(4226121-4226192)
chr7 (260-331)||(12644166-12644237)
chr7 (262-331)||(7158229-7158298)
chr7 (263-331)||(37563671-37563739)
chr7 (263-331)||(47558029-47558097)
chr7 (263-334)||(26825629-26825700)
chr7 (260-331)||(43937890-43937961)
chr7 (264-332)||(15827914-15827982)
chr7 (323-354)||(22661445-22661476)
chr7 (323-354)||(27480075-27480106)
chr7 (323-354)||(27480728-27480759)
chr7 (260-331)||(37563350-37563421)
chr7 (258-304)||(20426718-20426764)
[»] scaffold0182 (2 HSPs)
scaffold0182 (262-331)||(14410-14479)
scaffold0182 (263-320)||(13133-13190)
[»] scaffold0009 (2 HSPs)
scaffold0009 (263-331)||(262474-262542)
scaffold0009 (258-331)||(260995-261068)
[»] scaffold0347 (2 HSPs)
scaffold0347 (264-331)||(13609-13676)
scaffold0347 (266-331)||(14626-14691)
[»] scaffold0018 (1 HSPs)
scaffold0018 (264-331)||(73109-73176)
[»] scaffold1493 (2 HSPs)
scaffold1493 (260-331)||(589-660)
scaffold1493 (263-331)||(910-978)
[»] scaffold0321 (1 HSPs)
scaffold0321 (258-331)||(10979-11052)


Alignment Details
Target: chr1 (Bit Score: 79; Significance: 7e-37; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 153 - 263
Target Start/End: Original strand, 5180228 - 5180329
Alignment:
Q  153 aatcttctttagagtgtctttgttctttgtatggggggaacaacaaaacccttgacatttataaaggtcatgctcatgaacattgtgaaagaggaagaag 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||    
T  5180228 aatcttctttagagtgtctttgttctttgtatggggggaacaacaaaacccttgacatttataaa---------catgaacattgtgaaagaggaagaag 5180318  T
Q  253 ataaatattta 263  Q
    |||||||||||    
T  5180319 ataaatattta 5180329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 46282071 - 46282138
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  46282071 ggcttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatc 46282138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 49093039 - 49093108
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49093039 taggcttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 49093108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 46282888 - 46282826
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  46282888 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 46282826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 50063043 - 50062981
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50063043 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 50062981  T

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Target: chr1; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 32622460 - 32622389
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  32622460 tttagggtaaaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatc 32622389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 5180155 - 5180205
Alignment:
Q  104 gcaggtaatgaagaaaagaaaaaacataaacaaagaagatgaagttgcgaa 154  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5180155 gcaggtgatgaagaaaagaaaaaacataaacaaagaagatgaagttgcgaa 5180205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 13295681 - 13295615
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaa 329  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||||||||| |||| ||||||||    
T  13295681 aggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaa 13295615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 32619389 - 32619451
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  32619389 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatc 32619451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 13295134 - 13295202
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||  ||||| ||||||||||||||| | |||||||||||| |||||| ||||||||||    
T  13295134 aggcttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatc 13295202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 267 - 331
Target Start/End: Complemental strand, 25066055 - 25065991
Alignment:
Q  267 ttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||  |||||||||| |||||||| ||| ||||||||||||||||||| ||||||||||    
T  25066055 ttaaatatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatc 25065991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 51935299 - 51935232
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| ||||||||| |||||||||| | | ||||||||||||||||||| ||| ||||||    
T  51935299 ggcttaaatatgcttttcatccatgtaattatatgtcatttgatttttcatccctgagctttctaatc 51935232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 25064931 - 25065000
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||| |||||||||  ||||||||||| |||||||||   ||||||||||||||||||| ||||||||||    
T  25064931 taggattaaatatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatc 25065000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 1047589 - 1047521
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||| |||||||||||||| |||||| | ||||| ||||| || ||||  |||||||||    
T  1047589 aggcttaaatatgtctttcatccctgtaaatataggtcatttgaattttcgtctctgaagttactaatc 1047521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 12577009 - 12577081
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatcattt 335  Q
    |||||||||||||| |||| ||||||||| |||||||| ||||| ||||| ||  |||  |||||||||||||    
T  12577009 aggcttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtctatgaagttactaatcattt 12577081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 46282159 - 46282190
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  46282159 ttactaatcatttgaaagttcgtccctcttcc 46282190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 46282805 - 46282774
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  46282805 ttactaatcatttgaaagttcgtccctcttcc 46282774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 49093129 - 49093160
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  49093129 ttactaatcatttgaaagttcgtccctcttcc 49093160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 49093825 - 49093794
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  49093825 ttactaatcatttgaaagttcgtccctcttcc 49093794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 50062291 - 50062322
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  50062291 ttactaatcatttgaaagttcgtccctcttcc 50062322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 50062960 - 50062929
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  50062960 ttactaatcatttgaaagttcgtccctcttcc 50062929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 46364572 - 46364641
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||| |||| |||||| || |||||| | ||||| ||||| |||||||  |||||||||    
T  46364572 taggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 46364641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 2828192 - 2828260
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||  |||||||| || ||||||||  | ||||||||||||||| | | ||||||||||    
T  2828192 aggcttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatc 2828260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 24701654 - 24701586
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||| || ||||||||||| || |||| ||| ||||| ||||| |||||||  |||||||||    
T  24701654 aggcttaaataggtctttcatccctgcaaatataagccatttgaattttcgtccctgaagttactaatc 24701586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 32238698 - 32238766
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||| |||||||  ||||||||||| || |||||||  |||||  |||||||||||| ||||||||||    
T  32238698 aggctaaaatatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatc 32238766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 331
Target Start/End: Complemental strand, 49093878 - 49093846
Alignment:
Q  299 ccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||||||||| ||||||||||    
T  49093878 ccgtttgatttttcatccctgaacttactaatc 49093846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 34665765 - 34665837
Alignment:
Q  259 atttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34665765 atttaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 34665837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 34213763 - 34213831
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  34213763 aggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatc 34213831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 34666635 - 34666573
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  34666635 aaatatgtttttcatcgctgtaattataggccgtttgatttttcatccctgaacttactaatc 34666573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 34214630 - 34214561
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttc-atccctgaccttactaatc 331  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  34214630 aggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatc 34214561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 1232902 - 1232841
Alignment:
Q  259 atttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctga 320  Q
    |||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  1232902 atttaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctga 1232841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 33497717 - 33497649
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||||||||||| ||| ||||||||||    
T  33497717 aggcttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatc 33497649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 38598963 - 38599031
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||  ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  38598963 aggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 38599031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 25288180 - 25288109
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||  ||||||| ||| ||||||||| | ||||||||||||||||||| ||||||||||    
T  25288180 tttaggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatc 25288109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 1231522 - 1231593
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||| |||||||||||  ||||||||||  ||||||||||| ||||||||||||||| ||| ||||||||||    
T  1231522 tttaagcttaaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatc 1231593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 7393231 - 7393178
Alignment:
Q  278 tttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||| ||||||||| | ||||||||||||||||||| ||||||||||    
T  7393231 tttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatc 7393178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 4463527 - 4463459
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||  ||||||||||| || |||||||| |||||  |||||||||||| ||||||||||    
T  4463527 aggcttaaatatgcatttcatccctgcaagtataggccatttgaaatttcatccctgaacttactaatc 4463459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 36623351 - 36623419
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||||| |||||| || |||||||| ||||| ||||| |||||||  |||||||||    
T  36623351 aggcttaaatatgtttttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatc 36623419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 27437619 - 27437552
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||  ||||||||||| || |||||||||||||| ||||| |||||||  |||||||||    
T  27437619 ggcttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatc 27437552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 25287791 - 25287859
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||| |||| ||||||||| ||| |||| ||||| ||||| |||||||  |||||||||    
T  25287791 aggcttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatc 25287859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 27857128 - 27857056
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatcatt 334  Q
    |||| |||||||||| |||| |||||| || |||||||| ||||| ||||| |||||||  ||||||||||||    
T  27857128 taggtttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcatt 27857056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 34214540 - 34214504
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttccagaat 359  Q
    |||||||||||||||||||||||||||||||| ||||    
T  34214540 ttactaatcatttgaaagttcgtccctcttcccgaat 34214504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 43866709 - 43866777
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaat 330  Q
    ||||||||||||||| |||| |||||| || |||||||| ||||| ||||| |||||||  ||||||||    
T  43866709 taggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaat 43866777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 27436563 - 27436630
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||  ||||||||||| || |||||| ||||||| ||||| |||||||  |||||||||    
T  27436563 ggcttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatc 27436630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 331
Target Start/End: Original strand, 33497020 - 33497083
Alignment:
Q  268 taaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||| ||||||| | |||||||||||| | ||||||||||||| | ||| ||||||||||    
T  33497020 taaatatgattttcattcatgtaattataggtcatttgatttttcattcttgaacttactaatc 33497083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 34665858 - 34665889
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  34665858 ttactaatcatttgaaagttcgtccctcttcc 34665889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 34666553 - 34666522
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  34666553 ttactaatcatttgaaagttcgtccctcttcc 34666522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 330
Target Start/End: Complemental strand, 36623738 - 36623671
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaat 330  Q
    |||||||||||||| |||| |||||| || |||||||| ||||| ||||| |||||||  ||||||||    
T  36623738 aggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaat 36623671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 37342976 - 37343043
Alignment:
Q  265 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatca 332  Q
    ||||||||| || ||||||||||| || |||||| | ||||| |||||||||||||  ||||||||||    
T  37342976 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatca 37343043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 40525697 - 40525630
Alignment:
Q  265 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatca 332  Q
    ||||||||| || |||||||||||||| |||||| | ||||| ||||| |||||||  ||||||||||    
T  40525697 gcttaaataggtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatca 40525630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 43866901 - 43866834
Alignment:
Q  265 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatca 332  Q
    ||||||||| || ||||||||||| || |||||| | ||||| |||||||||||||  ||||||||||    
T  43866901 gcttaaataagtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatca 43866834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 23424896 - 23424826
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatcatt 334  Q
    ||||||||||||| |||| | |||| || |||||||| ||||| ||||| |||||||  ||||||||||||    
T  23424896 ggcttaaatatgtctttcgttcctgcaaatataggccatttgaattttcgtccctgaagttactaatcatt 23424826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 36576096 - 36576034
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||| |||||||||||||| |||| ||| |||||  |||||||||||| ||||| ||||    
T  36576096 aaatatgtatttcatccctgtaaatataagccatttgaaatttcatccctgaacttaccaatc 36576034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 40422546 - 40422477
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| || ||||||||||| || |||||| | ||||| ||||| |||||||  |||||||||    
T  40422546 taggcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 40422477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 41182281 - 41182209
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatcattt 335  Q
    |||||||||||||| |||| |||||| || |||| | | ||||| ||||| |||||||  |||||||||||||    
T  41182281 aggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtccctgaagttactaatcattt 41182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 4116798 - 4116866
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4116798 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatc 4116866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 4117648 - 4117580
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4117648 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatc 4117580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 33399966 - 33400033
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33399966 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 33400033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 33401228 - 33401159
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  33401228 taggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatc 33401159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 267 - 331
Target Start/End: Complemental strand, 1661527 - 1661463
Alignment:
Q  267 ttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1661527 ttaaatatgattttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 1661463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 14657310 - 14657242
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  14657310 aggcttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatc 14657242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 14656479 - 14656547
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  14656479 aggcttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatc 14656547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 17784486 - 17784418
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||||||||||| ||| ||||||| ||||||||||||||| ||| ||||||||||    
T  17784486 aggcttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatc 17784418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 13480204 - 13480275
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||| |||| |||||| || |||||||| ||||| ||||| |||||||  |||||||||    
T  13480204 tttaggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatc 13480275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 331
Target Start/End: Complemental strand, 8427451 - 8427398
Alignment:
Q  278 tttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||| ||||||||| | ||||||||||||||||||  ||||||||||    
T  8427451 tttcatccctgcaattataggtcatttgatttttcatccctggacttactaatc 8427398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 30234978 - 30234909
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||| |||| |||||| || ||||||  |||||| |||||||||||||  |||||||||    
T  30234978 taggcttaaatatgtctttcgtccctgcaaatataggttgtttgaattttcatccctgaagttactaatc 30234909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 1661442 - 1661411
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  1661442 ttactaatcatttgaaagttcgtccctcttcc 1661411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 14657221 - 14657190
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  14657221 ttactaatcatttgaaagttcgtccctcttcc 14657190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 33400054 - 33400085
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  33400054 ttactaatcatttgaaagttcgtccctcttcc 33400085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 23291745 - 23291811
Alignment:
Q  265 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| |||| |||||  || |||||||| ||||| |||||||||||||  |||||||||    
T  23291745 gcttaaatatgtctttcgtccctacaaatataggccatttgaattttcatccctgaagttactaatc 23291811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 5064333 - 5064402
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||| |||| ||||||||| |||| | | ||||| ||||| |||||||  |||||||||    
T  5064333 taggcttaaatatgtctttcgtccctgtaaatataagtcatttgaattttcgtccctgaagttactaatc 5064402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 13480398 - 13480333
Alignment:
Q  265 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaat 330  Q
    ||||||||| |||||||||||||| || |||||| | ||||| ||||| |||||||  ||||||||    
T  13480398 gcttaaataggtttttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaat 13480333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 13480594 - 13480525
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||| |||| ||| ||||| |||||| | ||||| ||||| |||||||  |||||||||    
T  13480594 taggcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatc 13480525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 15819875 - 15819807
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||| |||| |||||| || |||||| | ||||| ||||| |||||||  |||||||||    
T  15819875 aggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 15819807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 7e-28; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 2944770 - 2944699
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2944770 tttaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 2944699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 22736794 - 22736723
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  22736794 tttaggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatc 22736723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 45279384 - 45279317
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45279384 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 45279317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 48188383 - 48188445
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48188383 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 48188445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 1757405 - 1757337
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  1757405 aggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatc 1757337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 48189200 - 48189132
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  48189200 aggcttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatc 48189132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 11026732 - 11026665
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  11026732 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatc 11026665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 43105233 - 43105300
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  43105233 ggcttaaatatgttttacatccttgtaattataggccgtttgatttttcatccctgaacttactaatc 43105300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 43105929 - 43105867
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43105929 aaatacgtttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 43105867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 29193094 - 29193026
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  29193094 aggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatc 29193026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 1756550 - 1756617
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||    
T  1756550 ggcttaaatatatttttcatccttgtaattataggccgtttgatttttcatccatgaacttactaatc 1756617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 44476054 - 44476116
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  44476054 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgaacttactaatc 44476116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 45278549 - 45278611
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  45278549 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatc 45278611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 32717209 - 32717138
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||  ||||||||||||||||||||| | ||||||||||||||||| | ||||||||||    
T  32717209 tttaggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatc 32717138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 37249204 - 37249266
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  37249204 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatc 37249266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 2943908 - 2943980
Alignment:
Q  259 atttaggcttaaatatgtttttc-atccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  2943908 atttaggcttaaatatgcttttctatccctgcaattataggccgtttgatttttcat-cctgagcttactaatc 2943980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 29192034 - 29192102
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||| |||||||  ||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  29192034 aggctgaaatatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatc 29192102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 44482057 - 44481986
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||| | ||||||| ||||||||||||||||||| |||| ||||||||||||||| ||| ||||||||||    
T  44482057 tttagggtaaaatatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatc 44481986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 37249892 - 37249831
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||    
T  37249892 aaatatgcttttcatcc-tgcaattataggccgtttgatttttcatccctgagcttactaatc 37249831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 11025959 - 11026004
Alignment:
Q  286 ctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  11025959 ctgtaattataagccgtttgatttttcatccctgaacttactaatc 11026004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 2944678 - 2944642
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttccagaat 359  Q
    |||||||||||||||||||||||||||||||| ||||    
T  2944678 ttactaatcatttgaaagttcgtccctcttcccgaat 2944642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 1741383 - 1741454
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||| |||| |||||| || |||||| | ||||| ||||| |||||||  |||||||||    
T  1741383 tttaggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 1741454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 1756638 - 1756669
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  1756638 ttactaatcatttgaaagttcgtccctcttcc 1756669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 11026025 - 11026056
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  11026025 ttactaatcatttgaaagttcgtccctcttcc 11026056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 21300327 - 21300394
Alignment:
Q  265 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatca 332  Q
    ||||||||| || ||||||||||| || |||||| | ||||| |||||||||||||  ||||||||||    
T  21300327 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatca 21300394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 22129196 - 22129129
Alignment:
Q  265 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatca 332  Q
    ||||||||| || |||||||||||||| |||||| | ||||| ||||| |||||||  ||||||||||    
T  22129196 gcttaaataagtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatca 22129129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 37249810 - 37249779
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  37249810 ttactaatcatttgaaagttcgtccctcttcc 37249779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 45278632 - 45278663
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  45278632 ttactaatcatttgaaagttcgtccctcttcc 45278663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 45279296 - 45279265
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  45279296 ttactaatcatttgaaagttcgtccctcttcc 45279265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 48188466 - 48188497
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  48188466 ttactaatcatttgaaagttcgtccctcttcc 48188497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 48189111 - 48189080
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  48189111 ttactaatcatttgaaagttcgtccctcttcc 48189080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 53037027 - 53037094
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||| || |||||||||||||| |||||| | ||||| ||||| |||||||  |||||||||    
T  53037027 ggcttaaataagtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatc 53037094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 353
Target Start/End: Complemental strand, 11026644 - 11026614
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttc 353  Q
    |||||||||||||||||||||||||||||||    
T  11026644 ttactaatcatttgaaagttcgtccctcttc 11026614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 353
Target Start/End: Complemental strand, 43105846 - 43105816
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttc 353  Q
    |||||||||||||||||||||||||||||||    
T  43105846 ttactaatcatttgaaagttcgtccctcttc 43105816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 10749316 - 10749385
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| || |||| ||||||||| |||||| | ||||| ||||| |||||||  |||||||||    
T  10749316 taggcttaaataggtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatc 10749385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 351
Target Start/End: Original strand, 37249287 - 37249315
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctct 351  Q
    |||||||||||||||||||||||||||||    
T  37249287 ttactaatcatttgaaagttcgtccctct 37249315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 40257258 - 40257186
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatcattt 335  Q
    ||||||||||||||||||| ||||| ||| |||| |   ||||| ||||| |||||||  |||||||||||||    
T  40257258 aggcttaaatatgtttttcgtccctataaatataagttatttgaattttcgtccctgaaattactaatcattt 40257186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 20856930 - 20856999
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20856930 taggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatc 20856999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 20072971 - 20072902
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  20072971 taggcttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatc 20072902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 39181056 - 39181124
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  39181056 aggcttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatc 39181124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 20072121 - 20072188
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  20072121 ggcttaaatatgcttttcatctctgtaattataggccgtttgatttttcatccctgaacttactaatc 20072188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 39181896 - 39181829
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  39181896 ggcttaaatatgtttttaatccctgtaattataggtcgtttgatttttcatccctgaacttactaatc 39181829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 8654104 - 8654174
Alignment:
Q  261 ttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||| ||||||||||    
T  8654104 ttaggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatc 8654174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 331
Target Start/End: Complemental strand, 22870569 - 22870495
Alignment:
Q  257 atatttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||| ||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  22870569 atatataggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatc 22870495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 20857651 - 20857580
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||    
T  20857651 tttaggcttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatc 20857580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 16532898 - 16532960
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  16532898 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatc 16532960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 36476770 - 36476832
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  36476770 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatc 36476832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 31107930 - 31107998
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||  ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  31107930 aggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 31107998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 16533725 - 16533658
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||    
T  16533725 ggcttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatc 16533658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 21978112 - 21978050
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  21978112 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatc 21978050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 36477471 - 36477409
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  36477471 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatc 36477409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 278 - 331
Target Start/End: Original strand, 22869619 - 22869672
Alignment:
Q  278 tttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  22869619 tttcatccttgtaattataggccatttgatttttcatccctgagcttactaatc 22869672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 14744831 - 14744763
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||  ||||||||||| ||||||| | | ||||||||||||||||||| ||||||||||    
T  14744831 aggcttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatc 14744763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 316
Target Start/End: Original strand, 21972095 - 21972142
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatcc 316  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  21972095 aaatatgtttttcatccctgtaattatgggccatttgatttttcatcc 21972142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 21979073 - 21979004
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||  ||||||||||| ||||||| ||| |||||||||||||||  || ||||||||||    
T  21979073 taggcttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatc 21979004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 32052222 - 32052291
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||||||| ||||||||| |||||| | ||||| ||||| |||||||  |||||||||    
T  32052222 taggcttaaatatgtttttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatc 32052291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 33735309 - 33735380
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||| |||| |||||  || |||||||| ||||||||||| |||||||  |||||||||    
T  33735309 tttaggcttaaatatgtctttcgtccctacaaatataggccatttgatttttcgtccctgaaattactaatc 33735380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 7015506 - 7015578
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatcatt 334  Q
    |||||||||||| || |||| |||||| || |||||||| ||||| ||||||||| |||  ||||||||||||    
T  7015506 taggcttaaataggtctttcgtccctgcaaatataggccatttgaattttcatccatgaagttactaatcatt 7015578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 16532981 - 16533012
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  16532981 ttactaatcatttgaaagttcgtccctcttcc 16533012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 16533637 - 16533606
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  16533637 ttactaatcatttgaaagttcgtccctcttcc 16533606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 20072209 - 20072240
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  20072209 ttactaatcatttgaaagttcgtccctcttcc 20072240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 20072881 - 20072850
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  20072881 ttactaatcatttgaaagttcgtccctcttcc 20072850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 31108441 - 31108371
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||| |||||||||| ||||||||||| || ||||| |  ||||||||||||||| ||| ||||||||||    
T  31108441 tttaggtttaaatatgtatttcatccctgcaaatatagaca-tttgatttttcatccatgaacttactaatc 31108371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 36476853 - 36476884
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  36476853 ttactaatcatttgaaagttcgtccctcttcc 36476884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 39181145 - 39181176
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  39181145 ttactaatcatttgaaagttcgtccctcttcc 39181176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 39181808 - 39181777
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  39181808 ttactaatcatttgaaagttcgtccctcttcc 39181777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 14745446 - 14745515
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| || |||| |||||| || |||||| | ||||| |||||||||||||  |||||||||    
T  14745446 taggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 14745515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 25253472 - 25253403
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||| |||| |||||| || |||||| | ||||| ||||| |||||||  |||||||||    
T  25253472 taggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 25253403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 25317263 - 25317194
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||| |||| |||||| || |||||| | ||||| ||||| |||||||  |||||||||    
T  25317263 taggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 25317194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 32052609 - 32052541
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||| |||| |||||| || |||||| | ||||| ||||| |||||||  |||||||||    
T  32052609 aggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 32052541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 351
Target Start/End: Complemental strand, 36477388 - 36477360
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctct 351  Q
    |||||||||||||||||||||||||||||    
T  36477388 ttactaatcatttgaaagttcgtccctct 36477360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 39402784 - 39402736
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttt 310  Q
    |||| ||||||||||||||||||| || ||||||||| | |||||||||    
T  39402784 taggattaaatatgtttttcatccatgcaattataggtcatttgatttt 39402736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 20982523 - 20982591
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20982523 aggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 20982591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 29957816 - 29957884
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29957816 aggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 29957884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 20101766 - 20101837
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  20101766 tttaggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatc 20101837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 29958647 - 29958580
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  29958647 ggcttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatc 29958580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 20983361 - 20983294
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  20983361 ggcttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatc 20983294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 25624539 - 25624466
Alignment:
Q  258 tatttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||| ||||||||||||  ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  25624539 tattttggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatc 25624466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 20103245 - 20103177
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||| ||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  20103245 aggcttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatc 20103177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 25623288 - 25623355
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||  |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  25623288 ggcttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatc 25623355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 24387348 - 24387418
Alignment:
Q  261 ttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||  ||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||    
T  24387348 ttaggcttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatc 24387418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 24388358 - 24388289
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||  ||||||||||| ||||||| ||  ||||||||||||||||||| ||||||||||    
T  24388358 taggcttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatc 24388289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 42824078 - 42824127
Alignment:
Q  21 ataaatagttgaattttaaatgaagtcagagaaaatgaaagaagtggtat 70  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  42824078 ataaatacttgaattttaaatgaagtcggagaaaatgaaagaagtggtat 42824127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 331
Target Start/End: Original strand, 21103088 - 21103148
Alignment:
Q  266 cttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||| |||||||||     ||||||||||||||| |||||||||||||| ||||||||||    
T  21103088 cttaaatatgcttttcatcc-----attataggccgtttggtttttcatccctgaacttactaatc 21103148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 16366962 - 16367030
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||| |||| ||||||||| |||||| | ||||| ||||| |||||||  |||||||||    
T  16366962 aggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatc 16367030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 10446832 - 10446899
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||| |||||| || |||||||| ||||| ||||| |||||||  |||||||||    
T  10446832 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatc 10446899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 20983273 - 20983242
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  20983273 ttactaatcatttgaaagttcgtccctcttcc 20983242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 29957905 - 29957936
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  29957905 ttactaatcatttgaaagttcgtccctcttcc 29957936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 43236500 - 43236571
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||| |||||||  ||| ||||||| || |||||||| |||||  |||||||||||| ||||||||||    
T  43236500 tttaggctaaaatatgcattttatccctgcaaatataggccatttgaaatttcatccctgaacttactaatc 43236571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 20911513 - 20911443
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatcatt 334  Q
    ||||||||||||| |||| ||||||||| |||||| | ||||| ||||  |||||||  ||||||||||||    
T  20911513 ggcttaaatatgtctttcgtccctgtaaatataggtcatttgaatttttgtccctgaagttactaatcatt 20911443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 304
Target Start/End: Complemental strand, 21370630 - 21370590
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgttt 304  Q
    ||||||||||||| |||||||| |||||||||||| |||||    
T  21370630 ggcttaaatatgtatttcatccttgtaattataggtcgttt 21370590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 38813554 - 38813621
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38813554 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatc 38813621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 52815662 - 52815730
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  52815662 aggcttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatc 52815730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 52816524 - 52816456
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  52816524 aggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatc 52816456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 56556581 - 56556649
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  56556581 aggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatc 56556649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 23454953 - 23455023
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatcat 333  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  23454953 aggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcat 23455023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 38814428 - 38814360
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||    
T  38814428 aggcttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatc 38814360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 56557429 - 56557358
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  56557429 tttaagcttaaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatc 56557358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 38982691 - 38982629
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  38982691 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatc 38982629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 23455790 - 23455722
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||    
T  23455790 aggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatc 23455722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 331
Target Start/End: Complemental strand, 53477185 - 53477113
Alignment:
Q  259 atttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||||  ||||||| ||| ||||||||| | |||||||||||||| |||| ||||||||||    
T  53477185 atttaggcttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatc 53477113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 55013189 - 55013122
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| ||||||||| |||||||||||||  ||||||||||||| ||||| ||||||||||    
T  55013189 aggcttaaatatgcttttcatccatgtaattataggctatttgatttttcat-cctgagcttactaatc 55013122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 54591678 - 54591613
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaa 329  Q
    ||||||||||||  ||||||||||| ||||||||  | ||||||||||||||||||| ||||||||    
T  54591678 ggcttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaa 54591613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 13336942 - 13336871
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||  ||||||||||| || |||||| | |||||  |||||||||||| ||||||||||    
T  13336942 tttaggcttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttactaatc 13336871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 330
Target Start/End: Complemental strand, 22250121 - 22250051
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaat 330  Q
    ||||||||||||||||| |||| |||||| || |||||||| ||||| ||||| |||||||  ||||||||    
T  22250121 tttaggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaat 22250051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 53559772 - 53559704
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||| |||| |||||| || |||||||| ||||| ||||| |||||||  |||||||||    
T  53559772 aggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatc 53559704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 22249927 - 22249994
Alignment:
Q  265 gcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatca 332  Q
    ||||||||| || ||||||||||| || |||||| | ||||| |||||||||||||  ||||||||||    
T  22249927 gcttaaataagtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatca 22249994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 38814339 - 38814308
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  38814339 ttactaatcatttgaaagttcgtccctcttcc 38814308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 52816435 - 52816404
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  52816435 ttactaatcatttgaaagttcgtccctcttcc 52816404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 330
Target Start/End: Original strand, 54590146 - 54590209
Alignment:
Q  267 ttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaat 330  Q
    |||||||||  ||||||||||| ||||||||| | ||||||||||||||  ||| |||||||||    
T  54590146 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatctttgaacttactaat 54590209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 56556670 - 56556701
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  56556670 ttactaatcatttgaaagttcgtccctcttcc 56556701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 56557337 - 56557306
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  56557337 ttactaatcatttgaaagttcgtccctcttcc 56557306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 33294529 - 33294460
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||| |||| |||||| || |||||||  ||||| ||||| |||||||  |||||||||    
T  33294529 taggcttaaatatgtctttcctccctgcaaatataggcaatttgaattttcgtccctgaagttactaatc 33294460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 8287318 - 8287250
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||| || |||| |||||| || |||||||| ||||| ||||| |||||||  |||||||||    
T  8287318 aggcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatc 8287250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 9254405 - 9254473
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||| |||||||  ||||||||||| || |||||||| |||||  |||||||| ||| ||||||||||    
T  9254405 aggctaaaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttactaatc 9254473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 351
Target Start/End: Complemental strand, 38982608 - 38982580
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctct 351  Q
    |||||||||||||||||||||||||||||    
T  38982608 ttactaatcatttgaaagttcgtccctct 38982580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 27480848 - 27480780
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||    
T  27480848 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccttgattttactaatc 27480780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 37284108 - 37284176
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  37284108 aggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatc 37284176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 37289411 - 37289343
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  37289411 aggcttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatc 37289343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 27479987 - 27480054
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  27479987 ggcttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatc 27480054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 331
Target Start/End: Original strand, 22661362 - 22661424
Alignment:
Q  269 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  22661362 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatc 22661424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 4227274 - 4227205
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  4227274 taggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatc 4227205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 38643548 - 38643617
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||  ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  38643548 taggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatc 38643617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 12643099 - 12643167
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  12643099 aggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatc 12643167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 12930767 - 12930839
Alignment:
Q  259 atttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||||  ||||||||||| ||||||||| | ||||||||||||||||||| ||||||||||    
T  12930767 atttaggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatc 12930839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 45915909 - 45915841
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  45915909 aggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatc 45915841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 45914522 - 45914593
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||| | ||||||||||    
T  45914522 tttaggcttaaatatgcatttcatctctgtaattataggccatttgatttttcatccctaagcttactaatc 45914593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 12929282 - 12929354
Alignment:
Q  259 atttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||||||  ||||||||||| || |||||||  ||||||||||||||||||| ||||||||||    
T  12929282 atttaggcttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatc 12929354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 4226121 - 4226192
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||| |||| || ||| ||||||||||    
T  4226121 tttaggcttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatc 4226192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 331
Target Start/End: Complemental strand, 12644237 - 12644166
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||| |||||||||||  |||||||||| |||||| ||||| ||||||||||||||||||| ||||||||||    
T  12644237 tttaagcttaaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatc 12644166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 7158229 - 7158298
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||  ||||||||||  ||||||||||| ||||||||||||||| ||| ||||||||||    
T  7158229 taggcttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatc 7158298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 37563739 - 37563671
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||| |||| ||||||||| |||||||| ||||| ||||| |||||||  |||||||||    
T  37563739 aggcttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtccctgaagttactaatc 37563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 47558029 - 47558097
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||  ||||||| || |||||||||||  |||||||||||||||||||  |||||||||    
T  47558029 aggcttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatc 47558097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 26825629 - 26825700
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatcatt 334  Q
    |||||||||||||| |||| ||||||||| |||||| | ||||| ||||| |||||||  ||||||||||||    
T  26825629 aggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcatt 26825700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 43937890 - 43937961
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||| |||| ||| ||||| |||||| | ||||| |||||||||||||  |||||||||    
T  43937890 tttaggcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcatccctgaagttactaatc 43937961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 15827914 - 15827982
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatca 332  Q
    ||||||||||||| |||| |||||| || |||||||| ||||| ||||| |||||||  ||||||||||    
T  15827914 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatca 15827982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 22661445 - 22661476
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  22661445 ttactaatcatttgaaagttcgtccctcttcc 22661476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Original strand, 27480075 - 27480106
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  27480075 ttactaatcatttgaaagttcgtccctcttcc 27480106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 354
Target Start/End: Complemental strand, 27480759 - 27480728
Alignment:
Q  323 ttactaatcatttgaaagttcgtccctcttcc 354  Q
    ||||||||||||||||||||||||||||||||    
T  27480759 ttactaatcatttgaaagttcgtccctcttcc 27480728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 37563350 - 37563421
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||| |||  |||||| || |||||||| ||||| ||||| |||||||  |||||||||    
T  37563350 tttaggcttaaatatgtcttttgtccctgcaaatataggccatttgaattttcgtccctgaatttactaatc 37563421  T

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Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 20426764 - 20426718
Alignment:
Q  258 tatttaggcttaaatatgtttttcatccctgtaattataggccgttt 304  Q
    ||||||||||||||||||| ||||||||||| ||||| ||| |||||    
T  20426764 tatttaggcttaaatatgtatttcatccctgcaattagaggtcgttt 20426718  T

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Target: scaffold0182 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 14479 - 14410
Alignment:
Q  262 taggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  14479 taggcttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatc 14410  T

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Target: scaffold0182; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 320
Target Start/End: Original strand, 13133 - 13190
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctga 320  Q
    ||||||||||||| ||||||||||||||| ||||| || |||||||||||||| ||||    
T  13133 aggcttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctga 13190  T

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Target: scaffold0009 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 262542 - 262474
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  262542 aggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatc 262474  T

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Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 260995 - 261068
Alignment:
Q  258 tatttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||||  ||||||||||| ||||||||| | ||||||||||||||| |||  |||||||||    
T  260995 tatttaggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatc 261068  T

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Target: scaffold0347 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 13609 - 13676
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||  ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  13609 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatc 13676  T

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Target: scaffold0347; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 331
Target Start/End: Complemental strand, 14691 - 14626
Alignment:
Q  266 cttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||  |||||| |||  ||||||||||| ||||||||||||||||||| ||||||||||    
T  14691 cttaaatatgcatttcattccttcaattataggccatttgatttttcatccctgagcttactaatc 14626  T

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Target: scaffold0018 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 73109 - 73176
Alignment:
Q  264 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||    
T  73109 ggcttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatc 73176  T

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Target: scaffold1493 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 589 - 660
Alignment:
Q  260 tttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||  ||||||| ||| ||||||||| | ||||||||||||||||||| ||||||||||    
T  589 tttaggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatc 660  T

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Target: scaffold1493; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 331
Target Start/End: Complemental strand, 978 - 910
Alignment:
Q  263 aggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    |||||||||||||| |||| ||||||||| ||| |||| ||||| ||||| |||||||  |||||||||    
T  978 aggcttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatc 910  T

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Target: scaffold0321 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 11052 - 10979
Alignment:
Q  258 tatttaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaccttactaatc 331  Q
    ||||||||||||||||||| |||| |||||| || |||||| | ||||| ||||| ||| |||  |||||||||    
T  11052 tatttaggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 10979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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