View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0536_low_7 (Length: 290)

Name: NF0536_low_7
Description: NF0536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0536_low_7
NF0536_low_7
[»] chr3 (58 HSPs)
chr3 (4-115)||(52138775-52138887)
chr3 (1-115)||(33272218-33272338)
chr3 (4-115)||(28245412-28245524)
chr3 (4-115)||(54278995-54279107)
chr3 (4-115)||(51447905-51448016)
chr3 (5-110)||(47233796-47233902)
chr3 (4-115)||(22048-22159)
chr3 (17-115)||(38060419-38060518)
chr3 (12-98)||(35033129-35033215)
chr3 (4-106)||(54128353-54128456)
chr3 (4-98)||(49503767-49503861)
chr3 (17-115)||(43694960-43695060)
chr3 (17-110)||(5168820-5168914)
chr3 (22-98)||(50960846-50960922)
chr3 (1-98)||(25191351-25191446)
chr3 (1-115)||(53519558-53519679)
chr3 (17-97)||(38850108-38850188)
chr3 (4-97)||(3186744-3186836)
chr3 (19-99)||(27917560-27917640)
chr3 (15-95)||(45728133-45728213)
chr3 (13-106)||(19736980-19737075)
chr3 (13-106)||(19757883-19757978)
chr3 (18-100)||(3987036-3987118)
chr3 (4-97)||(48734349-48734440)
chr3 (5-98)||(39600894-39600987)
chr3 (13-94)||(344928-345009)
chr3 (17-95)||(45289307-45289387)
chr3 (17-107)||(19676283-19676374)
chr3 (31-90)||(26490317-26490376)
chr3 (31-94)||(38430850-38430913)
chr3 (45-106)||(39235154-39235216)
chr3 (5-97)||(29600875-29600968)
chr3 (36-95)||(48953638-48953697)
chr3 (19-94)||(54365194-54365268)
chr3 (17-98)||(11581432-11581513)
chr3 (17-108)||(30294323-30294418)
chr3 (5-99)||(52679058-52679154)
chr3 (19-98)||(21200540-21200617)
chr3 (7-98)||(31453151-31453242)
chr3 (5-97)||(31454441-31454531)
chr3 (24-92)||(42510233-42510301)
chr3 (19-98)||(36820174-36820253)
chr3 (30-97)||(41842725-41842792)
chr3 (13-98)||(50249368-50249456)
chr3 (5-86)||(31337751-31337831)
chr3 (21-98)||(39535653-39535730)
chr3 (62-98)||(48508268-48508304)
chr3 (4-115)||(54425167-54425278)
chr3 (34-88)||(37534429-37534483)
chr3 (32-98)||(49841622-49841688)
chr3 (35-88)||(26388487-26388540)
chr3 (24-97)||(44134044-44134117)
chr3 (44-107)||(36303994-36304057)
chr3 (57-99)||(3870656-3870698)
chr3 (32-90)||(29817507-29817565)
chr3 (32-98)||(36868437-36868503)
chr3 (22-95)||(42026752-42026825)
chr3 (40-96)||(37351418-37351474)
[»] chr4 (89 HSPs)
chr4 (1-115)||(436201-436316)
chr4 (4-115)||(31960009-31960121)
chr4 (4-115)||(52569710-52569822)
chr4 (1-111)||(33227181-33227292)
chr4 (4-115)||(48174288-48174400)
chr4 (4-115)||(53707769-53707881)
chr4 (4-111)||(33191047-33191155)
chr4 (4-115)||(56375265-56375377)
chr4 (5-115)||(37797828-37797939)
chr4 (17-115)||(43433912-43434011)
chr4 (17-115)||(23906492-23906589)
chr4 (4-115)||(28236160-28236270)
chr4 (4-115)||(48622738-48622848)
chr4 (3-99)||(20591512-20591608)
chr4 (5-115)||(27450374-27450483)
chr4 (4-92)||(46583043-46583131)
chr4 (4-99)||(1793435-1793530)
chr4 (19-115)||(4440843-4440940)
chr4 (4-98)||(47265415-47265509)
chr4 (4-73)||(12494725-12494794)
chr4 (3-115)||(20601841-20601954)
chr4 (4-97)||(39100749-39100840)
chr4 (4-115)||(1777212-1777322)
chr4 (21-115)||(20192025-20192120)
chr4 (4-115)||(27983175-27983280)
chr4 (8-98)||(39708412-39708502)
chr4 (4-97)||(31459003-31459098)
chr4 (17-80)||(26037736-26037799)
chr4 (37-115)||(50286970-50287049)
chr4 (4-90)||(37773672-37773757)
chr4 (5-91)||(44047568-44047654)
chr4 (13-98)||(54470191-54470276)
chr4 (5-98)||(41009562-41009656)
chr4 (17-98)||(35555860-35555941)
chr4 (19-98)||(51252674-51252753)
chr4 (17-99)||(28497478-28497559)
chr4 (13-97)||(33709908-33709992)
chr4 (15-99)||(42639232-42639316)
chr4 (14-97)||(30621418-30621501)
chr4 (5-98)||(38570960-38571053)
chr4 (17-98)||(41192824-41192905)
chr4 (13-98)||(46372008-46372093)
chr4 (6-94)||(1427501-1427589)
chr4 (3-106)||(7092424-7092528)
chr4 (48-115)||(32479057-32479125)
chr4 (18-98)||(44360076-44360155)
chr4 (53-115)||(8286455-8286518)
chr4 (5-88)||(49987404-49987487)
chr4 (4-98)||(51421707-51421799)
chr4 (36-98)||(26356626-26356688)
chr4 (13-99)||(31339521-31339606)
chr4 (4-98)||(45205058-45205155)
chr4 (21-98)||(10209026-10209103)
chr4 (13-98)||(17900464-17900549)
chr4 (33-98)||(29398822-29398887)
chr4 (18-95)||(36557246-36557322)
chr4 (5-98)||(46715585-46715673)
chr4 (19-99)||(50662377-50662458)
chr4 (13-96)||(50680723-50680807)
chr4 (4-110)||(16002902-16003008)
chr4 (39-98)||(42285913-42285972)
chr4 (43-98)||(47611741-47611796)
chr4 (19-98)||(50471516-50471595)
chr4 (37-96)||(56225074-56225133)
chr4 (4-98)||(1211603-1211697)
chr4 (5-79)||(10775654-10775728)
chr4 (13-98)||(31897641-31897724)
chr4 (17-99)||(40018395-40018477)
chr4 (14-95)||(55768717-55768798)
chr4 (14-95)||(55832973-55833054)
chr4 (19-99)||(45175997-45176076)
chr4 (8-95)||(1380346-1380433)
chr4 (19-98)||(21106978-21107057)
chr4 (4-51)||(35690279-35690326)
chr4 (29-95)||(2588991-2589056)
chr4 (63-108)||(20821209-20821255)
chr4 (56-97)||(35690319-35690360)
chr4 (45-105)||(44860862-44860923)
chr4 (29-98)||(49738817-49738886)
chr4 (23-95)||(31403234-31403304)
chr4 (22-90)||(42293470-42293538)
chr4 (19-98)||(25257794-25257873)
chr4 (60-98)||(53518533-53518571)
chr4 (19-97)||(55579023-55579100)
chr4 (13-58)||(6478921-6478966)
chr4 (16-97)||(22420928-22421009)
chr4 (30-99)||(38903932-38904001)
chr4 (67-99)||(21214792-21214824)
chr4 (43-99)||(45185239-45185295)
[»] chr7 (76 HSPs)
chr7 (4-115)||(49029251-49029363)
chr7 (4-115)||(34869395-34869507)
chr7 (4-115)||(35906396-35906508)
chr7 (1-115)||(33350001-33350116)
chr7 (4-98)||(13859221-13859315)
chr7 (4-115)||(37617919-37618032)
chr7 (4-115)||(6374843-6374955)
chr7 (4-115)||(12841470-12841582)
chr7 (4-115)||(31005198-31005310)
chr7 (4-115)||(45836675-45836787)
chr7 (4-110)||(44855372-44855479)
chr7 (4-98)||(39906583-39906677)
chr7 (4-115)||(11593935-11594047)
chr7 (4-98)||(46356069-46356163)
chr7 (4-115)||(33072929-33073039)
chr7 (4-115)||(43281651-43281761)
chr7 (15-110)||(2885922-2886018)
chr7 (4-115)||(29650359-29650471)
chr7 (5-98)||(46014394-46014486)
chr7 (4-110)||(38606980-38607086)
chr7 (4-115)||(43491283-43491395)
chr7 (4-109)||(7273014-7273120)
chr7 (4-98)||(35559206-35559301)
chr7 (4-95)||(36136739-36136830)
chr7 (32-98)||(22349623-22349689)
chr7 (28-98)||(36869457-36869527)
chr7 (13-99)||(47848658-47848744)
chr7 (30-110)||(31682802-31682883)
chr7 (4-115)||(36651969-36652079)
chr7 (17-97)||(27021906-27021986)
chr7 (6-71)||(32630571-32630636)
chr7 (19-95)||(7189442-7189518)
chr7 (19-99)||(36514419-36514499)
chr7 (4-99)||(23404393-23404487)
chr7 (13-96)||(42187454-42187537)
chr7 (17-99)||(43282396-43282478)
chr7 (19-98)||(19262646-19262725)
chr7 (20-98)||(40169640-40169718)
chr7 (13-97)||(28020948-28021032)
chr7 (24-99)||(38920789-38920864)
chr7 (39-97)||(15682184-15682242)
chr7 (19-115)||(25579272-25579370)
chr7 (5-98)||(36101978-36102071)
chr7 (5-98)||(41948492-41948585)
chr7 (19-95)||(45558352-45558428)
chr7 (4-99)||(8492445-8492540)
chr7 (19-97)||(5335910-5335988)
chr7 (32-98)||(12966025-12966091)
chr7 (13-95)||(28628149-28628231)
chr7 (29-99)||(35713695-35713765)
chr7 (13-98)||(48736112-48736197)
chr7 (5-98)||(14593737-14593834)
chr7 (5-97)||(39811933-39812025)
chr7 (35-98)||(7220750-7220813)
chr7 (30-92)||(26742115-26742177)
chr7 (19-96)||(30632958-30633035)
chr7 (19-88)||(47796359-47796428)
chr7 (5-98)||(16013260-16013357)
chr7 (30-98)||(18605359-18605427)
chr7 (30-98)||(18637563-18637631)
chr7 (30-98)||(18650997-18651065)
chr7 (52-99)||(6420702-6420749)
chr7 (19-90)||(27893769-27893840)
chr7 (5-72)||(37439580-37439647)
chr7 (21-98)||(5418071-5418149)
chr7 (17-90)||(1740789-1740862)
chr7 (21-98)||(30200176-30200253)
chr7 (19-99)||(9797916-9797995)
chr7 (30-98)||(40830224-40830292)
chr7 (59-98)||(24549906-24549945)
chr7 (24-99)||(30914680-30914755)
chr7 (47-98)||(38135425-38135476)
chr7 (5-71)||(42177255-42177321)
chr7 (13-87)||(46989887-46989961)
chr7 (30-98)||(6429156-6429225)
chr7 (17-86)||(23720829-23720898)
[»] chr1 (71 HSPs)
chr1 (4-115)||(1210720-1210832)
chr1 (4-110)||(32231154-32231261)
chr1 (4-115)||(9592709-9592821)
chr1 (4-115)||(30202325-30202437)
chr1 (4-115)||(34792544-34792656)
chr1 (4-115)||(51440960-51441072)
chr1 (4-110)||(15085909-15086016)
chr1 (4-115)||(8671895-8672005)
chr1 (4-115)||(696244-696356)
chr1 (4-115)||(4001650-4001762)
chr1 (4-115)||(22090069-22090183)
chr1 (4-115)||(32082940-32083052)
chr1 (4-115)||(51602033-51602143)
chr1 (4-115)||(8391747-8391859)
chr1 (4-115)||(49347588-49347700)
chr1 (5-98)||(9509294-9509387)
chr1 (19-115)||(4029112-4029209)
chr1 (5-98)||(38807884-38807981)
chr1 (4-98)||(43240592-43240688)
chr1 (4-98)||(1661405-1661499)
chr1 (4-107)||(27848008-27848112)
chr1 (4-98)||(39140495-39140589)
chr1 (13-99)||(43423703-43423789)
chr1 (29-99)||(48431618-48431688)
chr1 (17-98)||(2544587-2544668)
chr1 (4-85)||(9599620-9599701)
chr1 (4-100)||(36624078-36624173)
chr1 (4-79)||(52561843-52561918)
chr1 (17-105)||(40416359-40416448)
chr1 (5-98)||(40419615-40419708)
chr1 (4-83)||(37463101-37463178)
chr1 (5-98)||(35828763-35828856)
chr1 (15-95)||(51812511-51812591)
chr1 (5-95)||(38868858-38868948)
chr1 (21-98)||(52073675-52073753)
chr1 (32-93)||(14226047-14226108)
chr1 (13-98)||(26016421-26016506)
chr1 (17-98)||(36340016-36340097)
chr1 (32-107)||(5338727-5338803)
chr1 (30-98)||(32404739-32404807)
chr1 (23-95)||(37263325-37263397)
chr1 (19-98)||(13827930-13828009)
chr1 (47-98)||(25979444-25979495)
chr1 (17-99)||(3819068-3819150)
chr1 (13-95)||(17275180-17275262)
chr1 (29-98)||(8343071-8343140)
chr1 (4-100)||(18469293-18469387)
chr1 (14-98)||(16943160-16943243)
chr1 (31-98)||(27637846-27637913)
chr1 (30-97)||(41611807-41611874)
chr1 (13-95)||(6025589-6025671)
chr1 (27-97)||(13827784-13827854)
chr1 (13-98)||(18793201-18793286)
chr1 (21-98)||(34827317-34827394)
chr1 (38-98)||(990672-990732)
chr1 (30-98)||(10272260-10272328)
chr1 (30-86)||(19936515-19936571)
chr1 (13-80)||(17267927-17267994)
chr1 (47-94)||(17815490-17815537)
chr1 (19-98)||(23791857-23791936)
chr1 (55-90)||(31274578-31274613)
chr1 (40-95)||(44905548-44905603)
chr1 (59-98)||(52561802-52561841)
chr1 (59-97)||(7762651-7762689)
chr1 (37-95)||(7921843-7921901)
chr1 (44-98)||(16822235-16822289)
chr1 (5-95)||(19908255-19908345)
chr1 (29-97)||(4380013-4380081)
chr1 (66-98)||(10569280-10569312)
chr1 (15-98)||(27703995-27704079)
chr1 (18-94)||(43954188-43954264)
[»] chr5 (55 HSPs)
chr5 (1-115)||(24178482-24178597)
chr5 (4-115)||(4496359-4496471)
chr5 (4-115)||(38684942-38685054)
chr5 (4-115)||(1275240-1275351)
chr5 (17-115)||(1287774-1287873)
chr5 (4-111)||(12492583-12492694)
chr5 (4-115)||(2075669-2075781)
chr5 (5-98)||(16347591-16347684)
chr5 (4-115)||(28977054-28977164)
chr5 (4-110)||(3301819-3301926)
chr5 (17-115)||(34273015-34273114)
chr5 (17-115)||(14665702-14665801)
chr5 (4-115)||(10639272-10639391)
chr5 (32-115)||(20456776-20456860)
chr5 (13-98)||(14749291-14749376)
chr5 (22-98)||(33667209-33667285)
chr5 (1-92)||(15168764-15168855)
chr5 (19-98)||(31636133-31636212)
chr5 (4-97)||(26884902-26884996)
chr5 (11-95)||(36215480-36215564)
chr5 (14-97)||(15489706-15489789)
chr5 (29-98)||(18351120-18351190)
chr5 (21-98)||(2712936-2713013)
chr5 (17-82)||(14667751-14667816)
chr5 (30-98)||(28676596-28676664)
chr5 (19-95)||(418201-418279)
chr5 (17-107)||(43558030-43558121)
chr5 (5-99)||(6888969-6889063)
chr5 (29-99)||(10082951-10083021)
chr5 (17-98)||(79501-79582)
chr5 (4-80)||(27868-27944)
chr5 (32-106)||(43475243-43475318)
chr5 (5-99)||(6859357-6859451)
chr5 (15-97)||(7359474-7359555)
chr5 (19-89)||(11002645-11002715)
chr5 (33-97)||(37065533-37065597)
chr5 (21-98)||(41833795-41833874)
chr5 (42-98)||(42199299-42199355)
chr5 (36-98)||(1525651-1525713)
chr5 (49-99)||(21093772-21093822)
chr5 (4-72)||(219692-219760)
chr5 (36-96)||(21952364-21952424)
chr5 (19-79)||(32516546-32516606)
chr5 (4-48)||(42504446-42504490)
chr5 (19-98)||(4026548-4026627)
chr5 (16-87)||(38341641-38341712)
chr5 (61-115)||(38501613-38501668)
chr5 (21-71)||(37124559-37124609)
chr5 (20-98)||(38684471-38684549)
chr5 (56-97)||(15986951-15986992)
chr5 (40-97)||(27553842-27553899)
chr5 (4-97)||(31906636-31906729)
chr5 (4-36)||(20318957-20318989)
chr5 (40-115)||(29938126-29938202)
chr5 (30-98)||(38578734-38578802)
[»] chr8 (60 HSPs)
chr8 (4-115)||(36395144-36395257)
chr8 (4-115)||(36565436-36565548)
chr8 (1-115)||(40813294-40813411)
chr8 (4-115)||(36545122-36545236)
chr8 (4-94)||(2796532-2796622)
chr8 (4-115)||(11523918-11524031)
chr8 (4-115)||(39946832-39946944)
chr8 (5-115)||(18125151-18125260)
chr8 (4-115)||(42854199-42854311)
chr8 (31-115)||(12491333-12491418)
chr8 (4-98)||(8879653-8879747)
chr8 (6-94)||(18752093-18752178)
chr8 (4-97)||(8932679-8932770)
chr8 (4-98)||(45419214-45419306)
chr8 (5-98)||(32043566-32043659)
chr8 (32-115)||(6510623-6510707)
chr8 (23-99)||(12796912-12796988)
chr8 (5-96)||(9695607-9695698)
chr8 (5-95)||(13171865-13171955)
chr8 (4-92)||(30113416-30113504)
chr8 (17-97)||(45512709-45512789)
chr8 (17-98)||(2776442-2776524)
chr8 (5-98)||(10080120-10080211)
chr8 (44-93)||(37077768-37077817)
chr8 (5-98)||(44681252-44681345)
chr8 (5-95)||(7046310-7046400)
chr8 (32-98)||(18474173-18474239)
chr8 (40-98)||(35643814-35643872)
chr8 (21-98)||(29700268-29700345)
chr8 (13-93)||(39953482-39953562)
chr8 (21-99)||(10824376-10824454)
chr8 (5-115)||(21121134-21121233)
chr8 (14-99)||(2518604-2518689)
chr8 (5-62)||(5908618-5908675)
chr8 (29-98)||(25985813-25985881)
chr8 (21-98)||(36143357-36143434)
chr8 (29-90)||(41444547-41444608)
chr8 (14-91)||(44373761-44373838)
chr8 (17-96)||(6483245-6483324)
chr8 (5-96)||(16917160-16917251)
chr8 (19-62)||(25985509-25985552)
chr8 (17-84)||(33666726-33666793)
chr8 (21-92)||(34196064-34196135)
chr8 (19-98)||(41971991-41972069)
chr8 (17-98)||(13589474-13589555)
chr8 (21-98)||(30748449-30748526)
chr8 (20-81)||(42493536-42493597)
chr8 (54-98)||(30559718-30559762)
chr8 (33-72)||(7103274-7103313)
chr8 (60-99)||(9905093-9905132)
chr8 (4-71)||(13986469-13986536)
chr8 (8-43)||(25288881-25288916)
chr8 (8-43)||(25300216-25300251)
chr8 (13-98)||(79024-79112)
chr8 (49-95)||(26905122-26905168)
chr8 (36-98)||(29645044-29645106)
chr8 (5-50)||(16351366-16351411)
chr8 (17-98)||(23023231-23023312)
chr8 (5-50)||(29520636-29520681)
chr8 (13-82)||(30456441-30456510)
[»] scaffold0018 (2 HSPs)
scaffold0018 (4-115)||(31443-31555)
scaffold0018 (21-98)||(44081-44158)
[»] chr2 (56 HSPs)
chr2 (4-115)||(8180755-8180867)
chr2 (4-115)||(3866047-3866159)
chr2 (4-115)||(25834654-25834768)
chr2 (4-115)||(38452880-38452996)
chr2 (4-98)||(38429859-38429953)
chr2 (4-115)||(41197423-41197535)
chr2 (17-115)||(2610576-2610675)
chr2 (5-115)||(12734677-12734786)
chr2 (4-115)||(36183426-36183538)
chr2 (4-115)||(41763237-41763348)
chr2 (25-108)||(43238296-43238379)
chr2 (1-110)||(45367825-45367934)
chr2 (4-115)||(3243848-3243958)
chr2 (4-110)||(11992308-11992413)
chr2 (17-115)||(4807584-4807682)
chr2 (1-94)||(18424594-18424685)
chr2 (5-98)||(16097199-16097296)
chr2 (14-98)||(43752160-43752244)
chr2 (36-98)||(24583845-24583907)
chr2 (5-105)||(11412697-11412798)
chr2 (4-98)||(23997592-23997683)
chr2 (50-115)||(451843-451909)
chr2 (5-99)||(37481829-37481923)
chr2 (5-98)||(9556582-9556674)
chr2 (5-107)||(38434927-38435031)
chr2 (24-98)||(12141539-12141613)
chr2 (14-67)||(227307-227360)
chr2 (5-98)||(13240958-13241051)
chr2 (14-98)||(38860158-38860242)
chr2 (1-96)||(41545378-41545474)
chr2 (17-99)||(4598774-4598856)
chr2 (5-98)||(7825334-7825429)
chr2 (29-98)||(18958907-18958980)
chr2 (27-99)||(44437933-44438005)
chr2 (29-84)||(12882267-12882322)
chr2 (5-99)||(40759075-40759170)
chr2 (14-98)||(3481129-3481210)
chr2 (23-93)||(6218961-6219031)
chr2 (71-115)||(7326355-7326400)
chr2 (19-96)||(42092507-42092584)
chr2 (19-96)||(19337069-19337142)
chr2 (42-98)||(41858744-41858800)
chr2 (37-99)||(14197374-14197437)
chr2 (5-88)||(19024156-19024239)
chr2 (59-97)||(907710-907748)
chr2 (21-95)||(41330121-41330195)
chr2 (21-98)||(11017306-11017383)
chr2 (17-98)||(13149319-13149400)
chr2 (30-99)||(23714473-23714542)
chr2 (30-99)||(24102145-24102214)
chr2 (50-98)||(6237966-6238014)
chr2 (17-97)||(12905082-12905162)
chr2 (19-98)||(9578916-9578995)
chr2 (4-82)||(30743598-30743675)
chr2 (17-95)||(43832087-43832164)
chr2 (20-97)||(18188771-18188848)
[»] chr6 (35 HSPs)
chr6 (4-98)||(28085351-28085445)
chr6 (4-115)||(20427831-20427943)
chr6 (4-98)||(5258361-5258457)
chr6 (4-98)||(32755894-32755990)
chr6 (4-88)||(12890559-12890643)
chr6 (4-115)||(14030782-14030894)
chr6 (5-98)||(30031232-30031325)
chr6 (5-115)||(10100054-10100163)
chr6 (4-108)||(608134-608237)
chr6 (17-98)||(5631810-5631891)
chr6 (4-80)||(9706751-9706827)
chr6 (4-115)||(35043636-35043748)
chr6 (19-98)||(21352050-21352129)
chr6 (17-107)||(9593909-9594000)
chr6 (14-98)||(33084043-33084127)
chr6 (35-110)||(2689646-2689722)
chr6 (40-98)||(30679417-30679475)
chr6 (31-98)||(33496963-33497031)
chr6 (4-62)||(5080830-5080888)
chr6 (37-98)||(24665818-24665879)
chr6 (32-92)||(8364575-8364635)
chr6 (5-97)||(2079317-2079408)
chr6 (21-85)||(21870299-21870363)
chr6 (5-92)||(6641628-6641715)
chr6 (29-92)||(28027046-28027108)
chr6 (17-98)||(10617445-10617525)
chr6 (19-95)||(7513607-7513683)
chr6 (5-97)||(12134115-12134207)
chr6 (36-99)||(26291788-26291849)
chr6 (1-51)||(6056032-6056080)
chr6 (31-98)||(9568664-9568731)
chr6 (19-98)||(14389381-14389459)
chr6 (4-69)||(5095848-5095913)
chr6 (37-97)||(43266-43326)
chr6 (23-79)||(31818526-31818582)
[»] scaffold0570 (1 HSPs)
scaffold0570 (4-115)||(1143-1253)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-97)||(82693-82789)
[»] scaffold0113 (1 HSPs)
scaffold0113 (4-97)||(11810-11905)
[»] scaffold0157 (1 HSPs)
scaffold0157 (4-73)||(25683-25752)
[»] scaffold0036 (1 HSPs)
scaffold0036 (5-115)||(4466-4578)
[»] scaffold0171 (1 HSPs)
scaffold0171 (19-96)||(7431-7508)
[»] scaffold0045 (1 HSPs)
scaffold0045 (43-115)||(86804-86877)
[»] scaffold0325 (1 HSPs)
scaffold0325 (33-97)||(11802-11866)
[»] scaffold0199 (1 HSPs)
scaffold0199 (44-97)||(14626-14678)


Alignment Details
Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 52138775 - 52138887
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  52138775 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacctgta 52138874  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  52138875 gatgccgtggtaa 52138887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33272338 - 33272218
Alignment:
Q  1 taagaatgacaccattagagagagag--tgggggtagcacctata----gtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 94  Q
    ||||||||||||||||||||||||||  |||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33272338 taagaatgacaccattagagagagagagtgggggtagcacctatatatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 33272239  T
Q  95 agactgtagatgccgtggtaa 115  Q
    |||||||||||||||||||||    
T  33272238 agactgtagatgccgtggtaa 33272218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 28245412 - 28245524
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | | |||    
T  28245412 gaatgacatcattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaatagacttagatggtttgggcatgtagagagaaaacccgta 28245511  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  28245512 gatgccgtggtaa 28245524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 54278995 - 54279107
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| | |||    
T  54278995 gaatgacaccattagagagagagtaggggtagcacctatagtagaaaagttggtagaaaataggcttagacggtttgggcacgtagagagaagacccgta 54279094  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  54279095 gatgccgtggtaa 54279107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 51448016 - 51447905
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||    
T  51448016 gaatgacaccattagagagagagtaggg-tagcacctatagtagaaaagttggtagaaaataggcttagatagtttgggcatgtagagagaagatccgta 51447918  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  51447917 gatgccgtggtaa 51447905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 47233902 - 47233796
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtag 103  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||    
T  47233902 aatgacaccattagagagagaatggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtag 47233803  T
Q  104 atgccgt 110  Q
    |||||||    
T  47233802 atgccgt 47233796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 22048 - 22159
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||    
T  22048 gaatgtcaccattagagagagagtgggggtagcacctatagtagaaaagttggtag-aaataggcttagatggtttggacatgtagagagaagacccgta 22146  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  22147 gatgccgttgtaa 22159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 38060419 - 38060518
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  38060419 agagagagagtgggggtagcacctataatagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacctgtagatgccgtcgtaa 38060518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 35033129 - 35033215
Alignment:
Q  12 ccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  35033129 ccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttatatggtttggacatgtagagagaagac 35033215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 54128353 - 54128456
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  54128353 gaatgacaccattagagagagtgttggggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagaaaagacctgta 54128452  T
Q  103 gatg 106  Q
    ||||    
T  54128453 gatg 54128456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 49503861 - 49503767
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  49503861 gaatgacaccattagagagagagttcaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagac 49503767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 43695060 - 43694960
Alignment:
Q  17 agagagagagtggggg-tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggta 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||| ||| |||    
T  43695060 agagagagagtggggggtagcacctatagtagaaaagttggtagaaaatttgcttagatggtttgggcatgtagagagaagacctgtagatgtcgtcgta 43694961  T
Q  115 a 115  Q
    |    
T  43694960 a 43694960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 5168820 - 5168914
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgt 110  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||  ||||||||||||||| | |||||||||||    
T  5168820 agagagagagtgggggtagcacctatggtagaaaagttggtagaaaatacgcttagatggtttgaacatgtagagagaagacccgtagatgccgt 5168914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 50960922 - 50960846
Alignment:
Q  22 gagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  50960922 gagagttggggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagac 50960846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25191351 - 25191446
Alignment:
Q  1 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| |||||||||||   ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||| ||||||||||||||||    
T  25191351 taagaatgacatcattagagagaa--tgggggtagcacctatagtagaaaaattggaagaaaatagacttagatggtttggacatgtagagagaagac 25191446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 53519558 - 53519679
Alignment:
Q  1 taagaatgacaccattagagagagagtgggggtagcacctata------gtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 94  Q
    ||||||||||||||||||| |||||||||||||||||||||||      |||||||||||||||||||||||||||||||| ||||| |||| | |||||    
T  53519558 taagaatgacaccattagacagagagtgggggtagcacctatatatatagtagaaaagttggtagaaaataggcttagatgttttggacatgaatagaga 53519657  T
Q  95 ag-actgtagatgccgtggtaa 115  Q
    || || ||||||||||| ||||    
T  53519658 agaaccgtagatgccgttgtaa 53519679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 38850108 - 38850188
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||||| | | ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38850108 agagagagagagagagtagcacatatagtagaaaagttggtagaaaatagacttagatggtttgggcatgtagagagaaga 38850188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 3186744 - 3186836
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||||||||  || ||||||| ||||||||||||||| | |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  3186744 gaatgacaccattatggaaagagtggtggtagcacctatagtgggaaagttggtagaaaataggc-tagatgatttgggcatgtagagagaaga 3186836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 27917560 - 27917640
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||| ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||| ||||||||    
T  27917560 agagaaagttggggtagcacctatagtagaaaagatggtaggaaataggcttagatggtttggacatgtagaaagaagact 27917640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45728133 - 45728213
Alignment:
Q  15 ttagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||| | ||||||||| | |||||||||||||    
T  45728133 ttagagagagagtgggggtagcacatatagtagaaaagttggtagaaagtaggatcagatggttttgacatgtagagagaa 45728213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 19736980 - 19737075
Alignment:
Q  13 cattagagagagagt-gggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatg 106  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||| |||| ||||||| ||||| |||||||||| |||||||||    
T  19736980 cattagagagagagttgggggcagcacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatg 19737075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 19757883 - 19757978
Alignment:
Q  13 cattagagagagagt-gggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatg 106  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||| |||| ||||||| ||||| |||||||||| |||||||||    
T  19757883 cattagagagagagttgggggcagcacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatg 19757978  T

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Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 3987036 - 3987118
Alignment:
Q  18 gagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagactg 100  Q
    |||||||||| |||||| ||||||||||||||||| ||||||||| ||| ||||| ||||||||| |||||||||||||||||    
T  3987036 gagagagagttggggtatcacctatagtagaaaagatggtagaaactagacttaggtggtttgggaatgtagagagaagactg 3987118  T

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Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 48734440 - 48734349
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||||||||||||| |  | |||||||| | |||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  48734440 gaatgacaccattagagagtg--ttggggtagcgcgtatagtagaacagatggtagaaaataggcttaggtggtttgggcatgtagagagaaga 48734349  T

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Target: chr3; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 39600987 - 39600894
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||||| |||| ||||| | |||||| |||||| |||||||| |||||||||    
T  39600987 aatgacaacattagagagagagttggggtagtacctatagtagaaaagatggtggaaaacaagcttaggtggttttggcatgtaaagagaagac 39600894  T

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Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 345009 - 344928
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 94  Q
    ||||||||||||||| |||||||||| ||||||||||||| || |||||||||||||||  | |||||| ||||||||||||    
T  345009 cattagagagagagttggggtagcacttatagtagaaaagatgttagaaaataggcttaagtagtttggtcatgtagagaga 344928  T

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Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 45289387 - 45289307
Alignment:
Q  17 agagagagagtgggggtagcacctat--agtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||||||||| ||||||||||||||  |||||||||| |||| |||||||||||||| ||||||||||| ||||||||||    
T  45289387 agagagagagttggggtagcacctattcagtagaaaagatggtggaaaataggcttaggtggtttgggcacgtagagagaa 45289307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 19676374 - 19676283
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgc 107  Q
    |||||||| || |||||||||||||||||| ||||| || |||||||| ||||||| |||| | ||||||||||||||||| ||||||||||    
T  19676374 agagagagtgttggggtagcacctatagtacaaaagatgatagaaaattggcttaggtggtattggcatgtagagagaagacctgtagatgc 19676283  T

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Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 26490317 - 26490376
Alignment:
Q  31 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtaga 90  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  26490317 ggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttggacatgtaga 26490376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 38430850 - 38430913
Alignment:
Q  31 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 94  Q
    |||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||    
T  38430850 ggtagcacctatagtagaaaagatggtagaaaataggcttaggttgattgggcatgtagagaga 38430913  T

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Target: chr3; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 39235154 - 39235216
Alignment:
Q  45 tagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatg 106  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  39235154 tagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacctgtagatg 39235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 29600875 - 29600968
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggctt-agatggtttgggcatgtagagagaaga 97  Q
    ||||||| ||||||||||||||| |  ||| | | ||||||| ||||| |||||||||||||| || |||||||||||||||||||||||||||    
T  29600875 aatgacaacattagagagagagttgtcgtaacgcttatagtaaaaaagatggtagaaaataggttttagatggtttgggcatgtagagagaaga 29600968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 48953697 - 48953638
Alignment:
Q  36 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||||||| ||||||    
T  48953697 cacctatagtagaaaagttggtagaaaataaacttagatgatttgggcatgtaaagagaa 48953638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 54365268 - 54365194
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 94  Q
    ||||||||| |||||||||||||||||||||||  |||  ||||||| |||||| |||||||||||||||||||||    
T  54365268 agagagagttggggtagcacctatagtagaaaatatggcggaaaata-gcttaggtggtttgggcatgtagagaga 54365194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 11581432 - 11581513
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||  |||||| ||||| | |||||||| ||||||||| ||| ||||| ||||||||| |||||||||||||||    
T  11581432 agagagagagttagggtagaacctacaatagaaaagatggtagaaactagacttaggtggtttgggtatgtagagagaagac 11581513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 30294418 - 30294323
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca---tgtagagagaagac-tgtagatgcc 108  Q
    |||||||||| | | ||||||| |||| || |||||||||||||||||||| |||||||||||| |||   |||||||||||||| ||||||||||    
T  30294418 agagagagagagagagtagcacatatactaaaaaagttggtagaaaataggtttagatggtttgagcatattgtagagagaagacttgtagatgcc 30294323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 52679154 - 52679058
Alignment:
Q  5 aatgacaccattaga--gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||||||||||||  ||||||||||   ||||| |||||| ||||||||||| ||||||||||||  | || ||||| |||||||||||||||||    
T  52679154 aatgacaccattagaaagagagagtggaaatagcatctatagcagaaaagttggaagaaaataggctctggtgatttggacatgtagagagaagact 52679058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 21200540 - 21200617
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| | |||||||||||||  ||||||||| |||| |||| ||| ||||| |||||||||||||||||||||||||    
T  21200540 agagagaattggggtagcaccta--gtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagac 21200617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 31453242 - 31453151
Alignment:
Q  7 tgacaccattagagagagagtgggggtagcacctatagta-gaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||| ||||||| ||||||| |||| ||||||||||||| |||||| ||||||||| ||| ||||| | |||| ||||||||||||||||||    
T  31453242 tgacaacattaga-agagagttggggcagcacctatagtaagaaaagatggtagaaactagacttaggttgttttggcatgtagagagaagac 31453151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 31454531 - 31454441
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||| |||||||||||| || ||  |||||||||||||||||||| ||||||||| ||| ||| | ||||||| ||||||||||||||||    
T  31454531 aatgacaacattagagagagtgttggt-tagcacctatagtagaaaagatggtagaaactagactt-ggtggtttgtgcatgtagagagaaga 31454441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 42510301 - 42510233
Alignment:
Q  24 gagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagaga 92  Q
    |||| ||| |||||||||||||||||||| | || |||||||||||||| |||||||| ||||||||||    
T  42510301 gagttgggatagcacctatagtagaaaagatagtggaaaataggcttaggtggtttggacatgtagaga 42510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 36820253 - 36820174
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||| ||||||||||||||| ||| |||| |||| |||| ||||||||| |||||| | |||||| |||||||||    
T  36820253 agagagagttggggtagcacctatattagcaaagatggtggaaactaggcttaggtggtttagacatgtaaagagaagac 36820174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 41842792 - 41842725
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||||||||||||||||| |||| ||||  || ||||| ||||||||| ||||||||||||||    
T  41842792 gggtagcacctatagtagaaaagatggtggaaaccagtcttaggtggtttgggtatgtagagagaaga 41842725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 50249368 - 50249456
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggctta---gatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||| |||||||| | ||||||||||||| |||| |||| ||| ||||   | |||||||||||||||||| ||||||    
T  50249368 cattagagagagagttggggtagcgcgtatagtagaaaagatggtggaaactagacttaggtggtggtttgggcatgtagagtgaagac 50249456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 31337831 - 31337751
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatg 86  Q
    ||||||| ||||||||||| ||| ||| |||||||||||||||||||| |||| |||| ||||||||  ||||||| |||||    
T  31337831 aatgacagcattagagagaaagttggg-tagcacctatagtagaaaagatggttgaaactaggcttaagtggtttgagcatg 31337751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 39535730 - 39535653
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||| | ||||||||||||||||| |||||||||   ||||||| |||||| |||| |||||||||||||    
T  39535730 agagagttggggcaacacctatagtagaaaagatggtagaaacccggcttaggtggtttaggcaagtagagagaagac 39535653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 98
Target Start/End: Original strand, 48508268 - 48508304
Alignment:
Q  62 aataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||||||||||||||||||||||||    
T  48508268 aataggcttagatggtttgggcatgtagagagaagac 48508304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 54425278 - 54425167
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||  |||||||| || || || ||||| |||||||||| ||||||||||| |||||| | ||||  ||||||| ||||||| ||| |    
T  54425278 gaatgacaccattaggaagagagtgagg-tatcatctataatagaaaagtttgtagaaaatagacttagaagatttgaacatgtagggagaagacctgca 54425180  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  54425179 gatgccgttgtaa 54425167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 37534483 - 37534429
Alignment:
Q  34 agcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgta 88  Q
    |||||| |||||||||||| |||| |||||||||||||  |||||||||||||||    
T  37534483 agcaccgatagtagaaaagatggtggaaaataggcttacctggtttgggcatgta 37534429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 49841622 - 49841688
Alignment:
Q  32 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||| |||||||| |||| |||| ||| || || |||||||||| ||||||||||||||    
T  49841622 gtagcacctatattagaaaagatggtggaaactagactaaggtggtttgggcgtgtagagagaagac 49841688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 26388487 - 26388540
Alignment:
Q  35 gcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgta 88  Q
    ||||||||| |||||||| |||||||||||||| |||| || ||||||||||||    
T  26388487 gcacctataatagaaaagatggtagaaaataggtttaggtgatttgggcatgta 26388540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 44134117 - 44134044
Alignment:
Q  24 gagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||| |||||||| ||| ||||||||||| |||| |||||||| ||||| |||||||| ||| |||| ||||||    
T  44134117 gagttggggtagcgcctctagtagaaaagatggtggaaaatagacttaggtggtttggacatctagatagaaga 44134044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 36303994 - 36304057
Alignment:
Q  44 gtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgc 107  Q
    ||||||||| |||| |||| |||| |||||||| |||||||||||||||||||| ||||||||||    
T  36303994 gtagaaaagatggtggaaactagg-ttagatgggttgggcatgtagagagaagacctgtagatgc 36304057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 99
Target Start/End: Complemental strand, 3870698 - 3870656
Alignment:
Q  57 tagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||| | |||||||||||||| |||||||||||||||||||    
T  3870698 tagaaacttggcttagatggttttggcatgtagagagaagact 3870656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 29817507 - 29817565
Alignment:
Q  32 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtaga 90  Q
    ||||||||||||||||||||| | ||||||| || | |||| |||||||| ||||||||    
T  29817507 gtagcacctatagtagaaaagattgtagaaagtaagtttaggtggtttggacatgtaga 29817565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 36868503 - 36868437
Alignment:
Q  32 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| ||||| ||| |||| |||| ||||||||| |||||||||||| || | |||||||    
T  36868503 gtagcacctatggtagagaagatggtggaaagtaggcttaggtggtttgggcatatataaagaagac 36868437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 42026825 - 42026752
Alignment:
Q  22 gagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||| ||||||||||  | ||||||||||  ||| |||| ||||||||| ||||||| || |||||||||||    
T  42026825 gagagttggggtagcactcacagtagaaaagagggtggaaactaggcttaggtggtttgagcttgtagagagaa 42026752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 37351418 - 37351474
Alignment:
Q  40 tatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    ||||||||||||| ||||||||| ||| |||   |||||||||||||| ||||||||    
T  37351418 tatagtagaaaagatggtagaaactagacttgagtggtttgggcatgtggagagaag 37351474  T

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Target: chr4 (Bit Score: 104; Significance: 7e-52; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 436201 - 436316
Alignment:
Q  1 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ct 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  436201 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacct 436300  T
Q  100 gtagatgccgtggtaa 115  Q
    ||||||||||||||||    
T  436301 gtagatgccgtggtaa 436316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 31960121 - 31960009
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  31960121 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 31960022  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  31960021 gatgccgtggtaa 31960009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 52569822 - 52569710
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  52569822 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 52569723  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  52569722 gatgccgtggtaa 52569710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 33227181 - 33227292
Alignment:
Q  1 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ct 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |     
T  33227181 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagattgtttgggcatgtagagagaagaccc 33227280  T
Q  100 gtagatgccgtg 111  Q
    ||||||||||||    
T  33227281 gtagatgccgtg 33227292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 48174400 - 48174288
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||    
T  48174400 gaatgacaccattagagagagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacccgta 48174301  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  48174300 gatgccgtggtaa 48174288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 53707769 - 53707881
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  53707769 gaatgacaccattagaaagagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 53707868  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  53707869 gatgccgtggtaa 53707881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 33191155 - 33191047
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||    
T  33191155 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaatagacttagattgtttgggcatgtagagagaagacccgta 33191056  T
Q  103 gatgccgtg 111  Q
    |||||||||    
T  33191055 gatgccgtg 33191047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 56375265 - 56375377
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||    
T  56375265 gaatgacaccattagagagagagtaggggtagcacctataatagaaaagttggtagaaaacaggcttagatggtttgggcatgtagagagaagacccgta 56375364  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  56375365 gatgccgtggtaa 56375377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 37797828 - 37797939
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact-gtag 103  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||    
T  37797828 aatgacaccattagagagagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagattcgtag 37797927  T
Q  104 atgccgtggtaa 115  Q
    ||||||| ||||    
T  37797928 atgccgtcgtaa 37797939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 43433912 - 43434011
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  43433912 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaa 43434011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 23906589 - 23906492
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagactgtagatgccgtggtaa 115  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  23906589 agagagagagtgggggtagcacctatagtagaaaagtttgtagaaaataggcttagatggtttgagcatgtagagagaagac-gtagatgccgtggtaa 23906492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 28236160 - 28236270
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac-tgta 102  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  28236160 gaatgacaccattagag--agagtgggggtagcacctatagtagaaaagttggtggaaaataggcttagatggtttgggcatgtagagagaagacttgta 28236257  T
Q  103 gatgccgtggtaa 115  Q
    |||| ||| ||||    
T  28236258 gatgtcgtcgtaa 28236270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 48622848 - 48622738
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  48622848 gaatgacaccattagagagag--tgggggtagcacccatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 48622751  T
Q  103 gatgccgtggtaa 115  Q
     ||||||||||||    
T  48622750 aatgccgtggtaa 48622738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 20591608 - 20591512
Alignment:
Q  3 agaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  20591608 agaatgacaccattagggagagagtgggggtagcacttatagtagaaaagttggtagaaaataagattagatggtttgggcatgtagagagaagact 20591512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 27450483 - 27450374
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtag 103  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| | ||||    
T  27450483 aatgacaccattagagagag--tgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggttttgacatgtagagagaagacccgtag 27450386  T
Q  104 atgccgtggtaa 115  Q
    ||||||| ||||    
T  27450385 atgccgttgtaa 27450374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 46583131 - 46583043
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagaga 92  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  46583131 gaatgacaccattcgagagagagtggggatagcacctatagtagaaaagttggtagaaaataggcttagatgggttgggcatgtagaga 46583043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 1793435 - 1793530
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  1793435 gaatgacaccattagggagagagcgggggtagcacctatagtaaaaaagttggtagaaaataagcttagatggtttggacatgtagagagaagact 1793530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 4440843 - 4440940
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||    
T  4440843 agagagagtgggggcagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatctagagagaagacccgtagatgctgtggtaa 4440940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 47265509 - 47265415
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||| | |||||||||||| ||||||| ||||||||||||||||||||||    
T  47265509 gaatgacaccattatagagagagtgggggtaacacctatagtagaaaaggtagtagaaaataggtttagatgatttgggcatgtagagagaagac 47265415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 12494725 - 12494794
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttaga 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12494725 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttaga 12494794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 20601954 - 20601841
Alignment:
Q  3 agaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgt 101  Q
    |||||||||||| ||| |||||||||| | || ||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||    
T  20601954 agaatgacaccactagggagagagtggagataacacttatagtagaaaagttggtagaaaataggattagatggtttgtgcatgtagagagaagacctgt 20601855  T
Q  102 agatgccgtggtaa 115  Q
    ||||||||| ||||    
T  20601854 agatgccgttgtaa 20601841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 39100840 - 39100749
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  39100840 gaatgacaccattagagagag--tgggggtagcacctatagaagaaaagttgatagaaaataggcttagatggtttgaacatgtagagagaaga 39100749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 1777322 - 1777212
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact-gta 102  Q
    |||||||||||||||||||||  |||   |||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||  ||    
T  1777322 gaatgacaccattagagagag--tggaaatagcacctatagtaaaaaagttggtagaaaataggcttagatggtttggacatctagagagaagactcata 1777225  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  1777224 gatgccgtggtaa 1777212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 20192025 - 20192120
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||| | |||||||| |||||||    
T  20192025 agagagtgggggtagcacttatagtagaaaagttgatagaaaataagcttagatagtttgggcatgtagagagaagacccgtagatgctgtggtaa 20192120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 27983175 - 27983280
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact-gta 102  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||       |||||||||||||||||  ||||||||||||||||| |||    
T  27983175 gaatgacaccattagagagagagtgagggtagcacctatagtagaaaagttgg-------taggcttagatggtttgaacatgtagagagaagactcgta 27983267  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  27983268 gatgccgttgtaa 27983280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 39708412 - 39708502
Alignment:
Q  8 gacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| ||||||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  39708412 gacaccattagggagagagtgagggtagctcctgtagtataaaagttggtagaaaataggcttagatggtttgagcatgtatagagaagac 39708502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 31459003 - 31459098
Alignment:
Q  4 gaatgacaccattagagaga--gagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||| |||||||||||||  |||| | |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  31459003 gaatgataccattagagagacagagtcgaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtaaagagaaga 31459098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 26037799 - 26037736
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttg 80  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26037799 agagagagagtgagggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttg 26037736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 50286970 - 50287049
Alignment:
Q  37 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||||    
T  50286970 acctatagtagaaaagttggtagaaaatagacttggatggtttgggcatgtagagagaagacccgtagatgccgtggtaa 50287049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 37773757 - 37773672
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtaga 90  Q
    |||||| ||||||||||||||    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37773757 gaatgataccattagagagag-taaggggtagcacctatagtagaaaagtcggtagaaaataggcttagatggtttgggcatgtaga 37773672  T

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Target: chr4; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 44047654 - 44047568
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagag 91  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||| |||||||| |||||||||    
T  44047654 aatgacaacattagagagagagttggggtagcacctatagtagaaaaggtggtagaatctaggcttaggtggtttggacatgtagag 44047568  T

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Target: chr4; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 54470191 - 54470276
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| |||| ||| ||||  |||||||||||||||||||||||||    
T  54470191 cattagagagagagttggggtagcacctatagtagaaaagatggtggaaactagacttaagtggtttgggcatgtagagagaagac 54470276  T

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Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 41009656 - 41009562
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggt-agaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||||| |||| | ||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||||||| |||||||    
T  41009656 aatgacatcattagggagataatgggggtagcacctatagtagaaaagttggtaaaaaaatagacttagatggtttgtgcatgtagaaagaagac 41009562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 35555941 - 35555860
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||| ||||||||||||    
T  35555941 agagagagagttcgggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatttagagagaagac 35555860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 51252753 - 51252674
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||| |||| ||||||||||||||||||||    
T  51252753 agagagagttggggtagcacctctagtagaaaagatggtggaaactaggcttaggtggtatgggcatgtagagagaagac 51252674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 28497478 - 28497559
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||||| |||||||||||| ||||||||||| | || ||||| |||||||| ||||||||||||||||||||||||||    
T  28497478 agagagagagttggggtagcacctttagtagaaaagattgtggaaaa-aggcttaggtggtttgggcatgtagagagaagact 28497559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 33709908 - 33709992
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||| |||| |||| |||| |||||| ||||||| |||||||||    
T  33709908 cattagagagagagttggggtaacacctatagtagaaaagatggtggaaactaggtttaggtggtttaggcatgtggagagaaga 33709992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 42639316 - 42639232
Alignment:
Q  15 ttagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||||||||||  |||| |||||||||||||||||| |||| ||||  |||||||| |||||||| |||||||||||||||||    
T  42639316 ttagagagagagttagggttgcacctatagtagaaaagatggtggaaaccaggcttaggtggtttggacatgtagagagaagact 42639232  T

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Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 30621501 - 30621418
Alignment:
Q  14 attagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||| |||| |||||||||| ||||||||||||| |||| ||||||||| |||| || |||||||| ||||||||||||    
T  30621501 attagagagggagttggggtagcacttatagtagaaaagatggtggaaaataggtttaggtgatttgggcacgtagagagaaga 30621418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 38571053 - 38570960
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||| |||||||||  |||| ||||||||||||| ||||| | || |||| ||||||||| ||||||||||||||||| |||||||    
T  38571053 aatgacaacatttgagagagagctggggaagcacctatagtacaaaagatagtggaaactaggcttaggtggtttgggcatgtagaaagaagac 38570960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 41192824 - 41192905
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| ||||||||||||| |||||||||| |||| |||| ||| ||||| || |||| |||||||||||||||||    
T  41192824 agagagagagttggggtagcacctacagtagaaaagatggtggaaactagacttaggtgatttgtgcatgtagagagaagac 41192905  T

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Target: chr4; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 46372008 - 46372093
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||| ||||| ||||||||||||||||| |||||  | ||||||| ||| ||||| ||||||| |||||||||||||||||    
T  46372008 cattagagatagagttggggtagcacctatagtcgaaaatattgtagaaactagacttaggtggtttgtgcatgtagagagaagac 46372093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 1427589 - 1427501
Alignment:
Q  6 atgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 94  Q
    |||||| ||||||||||||||   |||||| || ||||||||||||  |||| |||| ||||||||||||||||| |||||||||||||    
T  1427589 atgacaacattagagagagagccagggtagaacatatagtagaaaacatggtggaaactaggcttagatggtttgagcatgtagagaga 1427501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 7092528 - 7092424
Alignment:
Q  3 agaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac-tgt 101  Q
    |||||||||  |||||||| ||||| ||  |||||||||||||||||||  || ||||||||||| |||  |||||||||||| |||||||||||| |||    
T  7092528 agaatgacatgattagagacagagttggaatagcacctatagtagaaaatatgatagaaaataggtttaagtggtttgggcatatagagagaagacatgt 7092429  T
Q  102 agatg 106  Q
    |||||    
T  7092428 agatg 7092424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 32479057 - 32479125
Alignment:
Q  48 aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||| ||||    
T  32479057 aaaagttggtagaaaataggcttagatggtttggacatgtagagaggagacctgtagaggccgttgtaa 32479125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 44360076 - 44360155
Alignment:
Q  18 gagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||| |||||| ||||||||||||||||| ||||||||| || | |||| | |||||||||||||||||||||||    
T  44360076 gagagagagttggggtatcacctatagtagaaaagatggtagaaacta-gattaggttgtttgggcatgtagagagaagac 44360155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 8286455 - 8286518
Alignment:
Q  53 ttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||||    
T  8286455 ttggtagaaaataggcttagatggtttaggcatgtagagagaagacccgtagatgccgtcgtaa 8286518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 49987404 - 49987487
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgta 88  Q
    ||||||| ||||||| |||||||  ||||  ||||||||||||||||| |||| |||||||||||||| |||||||| ||||||    
T  49987404 aatgacaacattagatagagagtctgggtcacacctatagtagaaaagatggtggaaaataggcttaggtggtttggtcatgta 49987487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 51421707 - 51421799
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||||||| |  | |||||||||| |||||||||  || || |||||||||||||||| |||||||||||| || |||||||||    
T  51421707 gaatgacaccattagagagtg--ttggggtagcacatatagtagattagatgatagaaaataggcttaggtggtttgggcatatacagagaagac 51421799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 26356626 - 26356688
Alignment:
Q  36 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||||||||  ||||||||||||    
T  26356626 cacctatagtagaaaagatggtagaaaatagacttaggtggtttgggcacttagagagaagac 26356688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 31339521 - 31339606
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||||||||| ||||||| |||||| ||||||||  |||| |||| || |||||| ||||||| ||||||||||||||||||    
T  31339521 cattagagagagagttggggtagaacctatggtagaaaa-atggtcgaaactaagcttaggtggtttgagcatgtagagagaagact 31339606  T

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Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 45205155 - 45205058
Alignment:
Q  4 gaatgacaccattagagagagagt-gggggtagcacctatagtagaaaagttggtagaaaataggc--ttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||  |||||||| ||||||||  ||||||||||||||| ||||||||||||| |  |||| ||||||| ||| |||||||||||||    
T  45205155 gaatgacaccattaacgagagagttgggggtagtgcctatagtagaaaagatggtagaaaatagacttttaggtggtttgtgcacgtagagagaagac 45205058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 10209026 - 10209103
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| ||||||| |||||||||||||||| ||| ||||| ||  ||||| |||||||||||||||| ||||||||    
T  10209026 agagagttggggtagaacctatagtagaaaagatggcagaaactaaacttagttggtttgggcatgtagcgagaagac 10209103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 17900464 - 17900549
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||  |||| ||||||||||||||||||||||||  |||||||| ||| || |  ||||||||||| |||||||||||||    
T  17900464 cattagagacggagttggggtagcacctatagtagaaaagacggtagaaactagactcatgtggtttgggcacgtagagagaagac 17900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 29398822 - 29398887
Alignment:
Q  33 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||| ||||||||| |||| ||||||| |||||  |||||||||||||||||||||||||    
T  29398822 tagcacctatggtagaaaagatggtggaaaatatgcttatgtggtttgggcatgtagagagaagac 29398887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 36557322 - 36557246
Alignment:
Q  18 gagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||||||| |||| |||||| |||||||||||| ||||||||| ||| ||||| ||||||||| ||||||||||||    
T  36557322 gagagagagttggggcagcacccatagtagaaaagatggtagaaactagacttag-tggtttgggaatgtagagagaa 36557246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 46715673 - 46715585
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||||||||||||| |     ||||||||| ||||||||| |||| |||| ||||||||| |||| ||||||||||||||||||||    
T  46715673 aatgacaacattagagagagagag-----agcacctattgtagaaaagatggtggaaactaggcttaggtggtgtgggcatgtagagagaagac 46715585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 50662377 - 50662458
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgg-tttgggcatgtagagagaagact 99  Q
    |||||||||  ||| | ||||||||||||||||| |||| |||| ||||||||| ||| |||||||||||||||||||||||    
T  50662377 agagagagtttgggcaacacctatagtagaaaagatggtggaaagtaggcttaggtggttttgggcatgtagagagaagact 50662458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 50680723 - 50680807
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggttt-gggcatgtagagagaag 96  Q
    |||||||||||||||  ||| | |||||||||| |||||| |||| |||||||||||||| ||||||  ||||||||||||||||    
T  50680723 cattagagagagagttagggcaacacctatagttgaaaagatggtggaaaataggcttaggtggtttatggcatgtagagagaag 50680807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 16002902 - 16003008
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||| |||| ||||| || | |||||||| ||| |||||||| |||||||||| ||||||||| |||  ||| ||||||||||| | |||    
T  16002902 gaatgacaccattatagagtgagtgaggatggcacctatggtataaaagttgatagaaaatagtcttagatgg-ttgaacatttagagagaagacccgta 16003000  T
Q  103 gatgccgt 110  Q
    ||||||||    
T  16003001 gatgccgt 16003008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 42285972 - 42285913
Alignment:
Q  39 ctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||| ||||||||| ||| ||||| ||||||||||||||| |||||||||    
T  42285972 ctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtatagagaagac 42285913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 47611741 - 47611796
Alignment:
Q  43 agtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||| || | |||||||||||||| |||||||||||||||||||||||||    
T  47611741 agtagaaaagatgatggaaaataggcttaggtggtttgggcatgtagagagaagac 47611796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 50471516 - 50471595
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| | ||||||||||  |||||||||||| |||| |||| |||| |||  |||||||||||||||||||||||||    
T  50471516 agagagactcggggtagcactaatagtagaaaagatggtggaaactaggtttaagtggtttgggcatgtagagagaagac 50471595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 56225074 - 56225133
Alignment:
Q  37 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||| | |||||||||||||    
T  56225074 acctatagtataaaagatggtagaaaataggcttaggtggtttgagtatgtagagagaag 56225133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 1211697 - 1211603
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtag--aaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||| |||||||  |||| | ||||||||||||| | ||||||||||  || ||| ||||| |||||||||| |||||||||||||||    
T  1211697 gaatgacaccattcgagagag--tgggagcagcacctatagtaaacaagttggtaggaaatatatgcttaaatggtttgggaatgtagagagaagac 1211603  T

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Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 10775728 - 10775654
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggttt 79  Q
    ||||||| |||||||||||| || |||||| ||||||||||||||||| ||||||||| ||| | ||| ||||||    
T  10775728 aatgacaacattagagagagtgttggggtaacacctatagtagaaaagatggtagaaactagacataggtggttt 10775654  T

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Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 31897724 - 31897641
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| ||| |||||||||||||  ||||||||| ||||||||| ||| ||| | ||||||| |||||||||||| ||||    
T  31897724 cattagagagatagttggggtagcaccta--gtagaaaagatggtagaaactagacttgggtggtttgcgcatgtagagagcagac 31897641  T

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Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 40018477 - 40018395
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||| | |||||||||||||| ||| ||||| ||||||||| | ||||||  |||||||||||||  |||||||||||    
T  40018477 agagagagaattggggtagcacctatcgtaaaaaagatggtagaaacttggcttatgtggtttgggcatgccgagagaagact 40018395  T

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Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 55768798 - 55768717
Alignment:
Q  14 attagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||||||| ||| |||||||||||||||||||||||| |  | ||||||||| |||| |||||| | |||||| ||||||    
T  55768798 attagagagatagtaggggtagcacctatagtagaaaagatcatggaaaataggtttaggtggtttagacatgtaaagagaa 55768717  T

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Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 55833054 - 55832973
Alignment:
Q  14 attagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||||||| ||| |||||||||||||||||||||||| |  | ||||||||| |||| |||||| | |||||| ||||||    
T  55833054 attagagagatagtaggggtagcacctatagtagaaaagatcatggaaaataggtttaggtggtttagacatgtaaagagaa 55832973  T

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Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 45175997 - 45176076
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||| |||||||  ||||| ||||||||| |  || ||||| ||||||| ||||||||||||||||||||||||||    
T  45175997 agagagagttggggtagtgcctattgtagaaaagattcta-aaaattggcttaggtggtttgggcatgtagagagaagact 45176076  T

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Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 1380346 - 1380433
Alignment:
Q  8 gacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||| ||||||||||||||| ||| || ||||||  ||||||||  || |||||| | ||||||| ||||||||||| ||||||||||    
T  1380346 gacaacattagagagagagttgggataacacctaccgtagaaaacatgatagaaactcggcttaggtggtttgggcacgtagagagaa 1380433  T

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Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 21106978 - 21107057
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||| | ||||| | |||||||||||| | | || |||||||||||||| | |||||||||| ||||||||||||    
T  21106978 agagagagttgaggtagtatctatagtagaaaggatagttgaaaataggcttaggtagtttgggcatctagagagaagac 21107057  T

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Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 35690279 - 35690326
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaa 51  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  35690279 gaatgacacctttaaagagagagttggggtagcacctatagtagaaaa 35690326  T

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Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 2588991 - 2589056
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||||| ||||||||| |||||| ||||||||| ||| ||||| |||||| |||||||||||||||    
T  2588991 ggggtagtacctatagt-gaaaagatggtagaaactagacttaggtggtttaggcatgtagagagaa 2589056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 20821255 - 20821209
Alignment:
Q  63 ataggcttagatggtttgggcatgtagagagaaga-ctgtagatgcc 108  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  20821255 ataggcttagatggtttaggcatgtagagagaagacctgtagatgcc 20821209  T

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Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 35690319 - 35690360
Alignment:
Q  56 gtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  35690319 gtagaaaataggcttaggtggtttgggcatgtagatagaaga 35690360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 44860862 - 44860923
Alignment:
Q  45 tagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagat 105  Q
    |||||||| |||| ||||  |||||||||||||||||||||||| |||||||| ||||||||    
T  44860862 tagaaaagatggtggaaaccaggcttagatggtttgggcatgtatagagaagagctgtagat 44860923  T

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Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 49738886 - 49738817
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||| ||||||||| ||||||||| | ||||||| || |||| || |||| |||||||||    
T  49738886 ggggtagcacctattgtagaaaagatggtagaaactcggcttaggtgatttgagcgtgtaaagagaagac 49738817  T

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Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 31403304 - 31403234
Alignment:
Q  23 agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||| |||||||||||||||||||||||  |||| |||| ||||||||| ||| ||||||||||| ||||||    
T  31403304 agagttggggtagcacctatagtagaaaa-atggtggaaactaggcttaggtgg-ttgggcatgtaaagagaa 31403234  T

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Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 42293538 - 42293470
Alignment:
Q  22 gagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtaga 90  Q
    |||||| || ||||||||||||||||||||| || | |||| | ||||||| ||||||||| |||||||    
T  42293538 gagagttggcgtagcacctatagtagaaaagatgatggaaactcggcttaggtggtttgggtatgtaga 42293470  T

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Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 25257873 - 25257794
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||| | |||| |||||| | || ||||| ||||||||  ||| ||||| ||||||| |||||||||||||||||    
T  25257873 agagagagttgaggtaacacctacaatataaaagatggtagaagctagacttaggtggtttgagcatgtagagagaagac 25257794  T

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Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 53518571 - 53518533
Alignment:
Q  60 aaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  53518571 aaaataggcttaggtggtttgggtatgtagagagaagac 53518533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 55579023 - 55579100
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||| ||  || |||||||||| |||||  |||||||||||| |||||| ||||| ||||||||| ||||||||    
T  55579023 agagagagttggaataacacctatagt-gaaaaaatggtagaaaatatgcttaggtggttcgggcatgtaaagagaaga 55579100  T

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Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 6478966 - 6478921
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggta 58  Q
    |||||||| |||||| ||||| |||||||||||||||||| |||||    
T  6478966 cattagagtgagagttggggtggcacctatagtagaaaagatggta 6478921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 22421009 - 22420928
Alignment:
Q  16 tagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||| |||| || |||||| || |||| |||||| |||| |||  ||||||||| || ||||| |||||||||||||||    
T  22421009 tagagagggagttggagtagcaactgtagtggaaaagatggtggaagctaggcttaggtgatttggacatgtagagagaaga 22420928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 38904001 - 38903932
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||||||| ||  |||||||| |||| |||| | ||||||| ||||||| |||||| |||||||||||    
T  38904001 gggtagcaccgatcatagaaaagatggtggaaactcggcttagttggtttgagcatgtggagagaagact 38903932  T

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Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 21214824 - 21214792
Alignment:
Q  67 gcttagatggtttgggcatgtagagagaagact 99  Q
    |||||| ||||||||||||||||||||||||||    
T  21214824 gcttaggtggtttgggcatgtagagagaagact 21214792  T

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Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 45185295 - 45185239
Alignment:
Q  43 agtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||||||| |||| || ||||||||||| || ||||||||| |||||| ||||||    
T  45185295 agtagaaaagatggtggataataggcttaggtgatttgggcatatagagacaagact 45185239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 49029251 - 49029363
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  49029251 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 49029350  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  49029351 gatgccgtggtaa 49029363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 34869395 - 34869507
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  34869395 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 34869494  T
Q  103 gatgccgtggtaa 115  Q
     ||||||||||||    
T  34869495 aatgccgtggtaa 34869507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 35906508 - 35906396
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  35906508 gaatgacaccattagagagagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 35906409  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  35906408 gatgccgtggtaa 35906396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33350116 - 33350001
Alignment:
Q  1 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ct 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |     
T  33350116 taagaatgacaccattagagagagagtgggggttgcacctatagtagaaaagttgctagaaaataggcttagatggtttgggcatgtagagagaagaccc 33350017  T
Q  100 gtagatgccgtggtaa 115  Q
    ||||||||||||||||    
T  33350016 gtagatgccgtggtaa 33350001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 13859315 - 13859221
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13859315 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 13859221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 37617919 - 37618032
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtag-aaaataggcttagatggtttgggcatgtagagagaaga-ctgt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||    
T  37617919 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaaataggcttagatggtttgggcatgtagagagaagacccgt 37618018  T
Q  102 agatgccgtggtaa 115  Q
    ||||||||||||||    
T  37618019 agatgccgtggtaa 37618032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 6374843 - 6374955
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||    
T  6374843 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgagcatgtagagagaagaccagta 6374942  T
Q  103 gatgccgtggtaa 115  Q
    ||||| |||||||    
T  6374943 gatgctgtggtaa 6374955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 12841582 - 12841470
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  12841582 gaatgaccccattagagagagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 12841483  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  12841482 gatgccgtggtaa 12841470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 31005198 - 31005310
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||    
T  31005198 gaataacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagacccgta 31005297  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  31005298 gatgccgtggtaa 31005310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 45836787 - 45836675
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  45836787 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgta 45836688  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  45836687 gatgccgttgtaa 45836675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 44855479 - 44855372
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  44855479 gaatgacaccattagagagagagtggggatagtacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 44855380  T
Q  103 gatgccgt 110  Q
    ||||||||    
T  44855379 gatgccgt 44855372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 39906677 - 39906583
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39906677 gaatgacaccattagagagagagtgagggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagac 39906583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 11593935 - 11594047
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | |||    
T  11593935 gaatgacaccatttgagagagagtgggggtagcacctatagtagaaaagttggtagaaaatacggttagatggtttgggcatgtagagagaagacccgta 11594034  T
Q  103 gatgccgtggtaa 115  Q
    |||||| ||||||    
T  11594035 gatgccatggtaa 11594047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 46356163 - 46356069
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46356163 gaatgacaccatcagagagagaatgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagac 46356069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 33072929 - 33073039
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||    
T  33072929 gaatgacaccattagag--agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacccgta 33073026  T
Q  103 gatgccgtggtaa 115  Q
    |||| ||||||||    
T  33073027 gatgtcgtggtaa 33073039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 43281651 - 43281761
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  43281651 gaatgacaccattagag--agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgta 43281748  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  43281749 gatgccgttgtaa 43281761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 2886018 - 2885922
Alignment:
Q  15 ttagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgt 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  2886018 ttagggagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtagatgccgt 2885922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 29650359 - 29650471
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  29650359 gaatgacaccattcgagagagagtgggggcagcacctatagtagaaaaattggtagaaaataggcttagatggtttggacatgtagagagaagacccgta 29650458  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  29650459 gatgccgttgtaa 29650471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 46014486 - 46014394
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  46014486 aatgacaccattagagagagagtgggggttgcacctatagtagaaaagttggtagaaaataggcttagatgg-ttggacatgtagagagaagac 46014394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 38606980 - 38607086
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  38606980 gaatgacaacatta-agagagagtgggggtagcacctatagtagaaaggttggtagaaaataggcttagatggtttggacatgtagagagaagacccgta 38607078  T
Q  103 gatgccgt 110  Q
    ||||||||    
T  38607079 gatgccgt 38607086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 43491283 - 43491395
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||| | |||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  43491283 gaatgacaccattggggagagagtaggggtaacacctatagtataaaaattggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 43491382  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  43491383 gatgccgtcgtaa 43491395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 7273014 - 7273120
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||| |||| ||||||  ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  7273014 gaatgacacctttagggagagaacgggagtatcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtacagagaagacctgta 7273113  T
Q  103 gatgccg 109  Q
    |||||||    
T  7273114 gatgccg 7273120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 35559301 - 35559206
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacct-atagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||    
T  35559301 gaatgacaccatttgagagagagtgggggtagcaccttatagtagaaaagttggtagaaaataggcttagatgatttggacatttagtgagaagac 35559206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 36136739 - 36136830
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||| | |||||||||| |||||||||    
T  36136739 gaatgacaccattagagagagagttggggtagcacctatagtagaaaagatggtagaaaatagtcttaggttgtttgggcatatagagagaa 36136830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 22349623 - 22349689
Alignment:
Q  32 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22349623 gtagcacctatagtagaaaagttggtagaaaataggcttagatggttttggcatgtagagagaagac 22349689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 36869527 - 36869457
Alignment:
Q  28 gggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  36869527 gggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttggtcatgtagagagaagac 36869457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 47848658 - 47848744
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||| |||||||||||    
T  47848658 cattagagagagagttggggtagcgcctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtcgagagaagact 47848744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 31682883 - 31682802
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgt 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||    
T  31682883 gggtagcacatatagtagaaaagttggtagaaaataggcttagatggtttgggtatgtagagagaagacccgtagatgccgt 31682802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 36651969 - 36652079
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||||||||| |  | ||||| ||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | |||    
T  36651969 gaatgacaccattagagaggg--taggggtggcatccatagtagaaaagttggtagaaaataggcttagatggtttcagcatgtagagagaagacccgta 36652066  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  36652067 gatgccgtggtaa 36652079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 27021986 - 27021906
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||||| |||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||||||||||||||    
T  27021986 agagagagagttggggtagcacctatagtagaaaagttggtgaaaactaggcttaggtggtttgggcatgtagagagaaga 27021906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 32630571 - 32630636
Alignment:
Q  6 atgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggctta 71  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32630571 atgataccattggagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggctta 32630636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 7189518 - 7189442
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  7189518 agagagagttggggtcgcacctatagtagaaaagatggtagaaaataagcttaggtggtttgggcatgtagagagaa 7189442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 36514499 - 36514419
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||| |||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||| ||||    
T  36514499 agagagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagacgact 36514419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 23404393 - 23404487
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||  |||| ||||||||||  |||||||    
T  23404393 gaatgacaccattagggagagagtgggggtaacacttatagtagaaaagttgggagaaaataggcttagacagttt-ggcatgtagattgaagact 23404487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 42187454 - 42187537
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    ||||||| ||||||| ||||||||||||||| |||||||| |||| |||||||||||||| ||||||||||||||| |||||||    
T  42187454 cattagaaagagagtcggggtagcacctataatagaaaagatggtggaaaataggcttaggtggtttgggcatgtaaagagaag 42187537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 43282396 - 43282478
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||| ||  ||||||||||||||||||||||    
T  43282396 agagagagagttggggtagcacctatagtagaaaagtcggtggaaactaggcttaggtgaattgggcatgtagagagaagact 43282478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 19262725 - 19262646
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||| | ||||||| ||||||| |||||||||||||||||    
T  19262725 agagagagttggggtagcacctattgtagaaaagatggtagaaacttggcttaggtggtttgagcatgtagagagaagac 19262646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 40169640 - 40169718
Alignment:
Q  20 gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||| | |||||||||| ||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |||||    
T  40169640 gagagaattggggtagcacttatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagataagac 40169718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 28020948 - 28021032
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||| ||||| |||||||||| ||| ||||||||| |||| |||| | ||||||| ||||||||||||||||||||||||    
T  28020948 cattagagaaagagttggggtagcacttatcgtagaaaagatggtggaaacttggcttaggtggtttgggcatgtagagagaaga 28021032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 38920789 - 38920864
Alignment:
Q  24 gagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||| |||||||||||||||||||||||| |||| |||| ||||||||  ||||||||||||||||||||| ||||    
T  38920789 gagttggggtagcacctatagtagaaaagatggtggaaactaggcttaagtggtttgggcatgtagagagatgact 38920864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 15682184 - 15682242
Alignment:
Q  39 ctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  15682184 ctatagtagaaaagttggtaggaaataggcttagatggtttaggcaggtagagagaaga 15682242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 25579370 - 25579272
Alignment:
Q  19 agagagagtgggg-gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac-tgtagatgccgtggtaa 115  Q
    ||||||||||||| |||||||| |||| ||||||  |||| |||||||||||||| ||||||||| ||||||||||||||| ||||||| | |||||||    
T  25579370 agagagagtggggagtagcacccatagcagaaaaaatggtggaaaataggcttaggtggtttggggatgtagagagaagacatgtagattctgtggtaa 25579272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 36102071 - 36101978
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||| |||  ||||||  ||||||||||||| |||||||| || | |||||||||||||| ||||||||| |||||||||||||||    
T  36102071 aatgacaacatttgaggaagagtgaaggtagcacctataatagaaaagatgttggaaaataggcttaggtggtttggggatgtagagagaagac 36101978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 41948492 - 41948585
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||||||| |||||| || ||||||| || | |||||||| |||| |||| ||||||||  |||||||||||||||||||||||||    
T  41948492 aatgacaacattagagtgagagttggcgtagcacttacaatagaaaagatggtggaaactaggcttaagtggtttgggcatgtagagagaagac 41948585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 45558352 - 45558428
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| | | ||||| ||||||| ||| ||||||||||    
T  45558352 agagagagttggggtaccacctatagtagaaaagttggtagaaactcgacttaggtggtttgtgcacgtagagagaa 45558428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 8492540 - 8492445
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||||||||| |||||| | |||||| ||||||||||| ||| | |||||||||||||||| || |||||||  | |||||||| ||||||    
T  8492540 gaatgacaccattagggagagatttggggtaacacctatagtaaaaatgatggtagaaaataggctaaggtggtttgaacttgtagagaaaagact 8492445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 5335910 - 5335988
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||| ||||||||| ||||||||| |||| |||| |||| ||| ||||| |||||||||||| |||||||||||    
T  5335910 agagagagttggggtagcatctatagtaggaaagatggtcgaaactagacttaggtggtttgggcatatagagagaaga 5335988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 12966025 - 12966091
Alignment:
Q  32 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||| ||||||| |||| |||| || |||||| |||||||||||||||||||||||||    
T  12966025 gtagcacctatagaagaaaagatggtggaaactatgcttaggtggtttgggcatgtagagagaagac 12966091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 28628231 - 28628149
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||||||| |||| || |||||||||| |||||||| | |||| |||||| ||||||| ||||||||||||||| ||||||    
T  28628231 cattagagagggagttggagtagcacctagagtagaaatgatggtggaaaattggcttaggtggtttgggcatgtaaagagaa 28628149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 35713695 - 35713765
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||| || |||||| |||||  |||| |||||||||||||| ||||||||||||||||||||||||||    
T  35713695 ggggtaggacatatagttgaaaaaatggtggaaaataggcttaggtggtttgggcatgtagagagaagact 35713765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 48736197 - 48736112
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||| ||||||||| ||||||||||||| |||||||||| ||| ||||| ||| ||||| |||||||  ||||||||| ||||||    
T  48736197 cattatagagagagttggggtagcacctacagtagaaaagatgggagaaactagacttaggtggtttgctcatgtagagcgaagac 48736112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 14593737 - 14593834
Alignment:
Q  5 aatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||||| ||| ||||| || ||||||||||||| ||||||||    
T  14593737 aatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 14593834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 39811933 - 39812025
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||| ||||||||||||||| |||| |||||||||  |||||||  ||||  ||| | ||||||| | ||||||||||||||||||||||    
T  39811933 aatgacaacattagagagagagttggggcagcacctatcatagaaaaaatggtgaaaactcggcttaggtagtttgggcatgtagagagaaga 39812025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 7220750 - 7220813
Alignment:
Q  35 gcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||| ||||||||| || |||||| | ||||||| |||||||||||||||||||||||||    
T  7220750 gcacctattgtagaaaagatgatagaaacttggcttaggtggtttgggcatgtagagagaagac 7220813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 26742177 - 26742115
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagaga 92  Q
    ||||||||||||||||||||||| |||| ||||||||| |||| |||||||  ||||||||||    
T  26742177 gggtagcacctatagtagaaaagatggtggaaaataggattaggtggtttgaacatgtagaga 26742115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 30632958 - 30633035
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    ||||||||| ||||||||||||||  || ||||  |||| |||  | |||||||||||||||||||||||||||||||    
T  30632958 agagagagtcggggtagcacctatcataaaaaaaatggtggaagctcggcttagatggtttgggcatgtagagagaag 30633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 47796428 - 47796359
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgta 88  Q
    ||||||||| || ||| || |||||||||||||| |||| |||||||||| ||| |||||||||||||||    
T  47796428 agagagagttggagtaccaactatagtagaaaaggtggttgaaaataggcgtaggtggtttgggcatgta 47796359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 16013260 - 16013357
Alignment:
Q  5 aatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| ||||||||||||||||    |||||  ||||||||||| ||||  ||||||||| ||| ||||| || ||||||||||||| ||||||||    
T  16013260 aatgacaacattagagagagagtgagctggggtgacacctatagtacaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 16013357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 18605427 - 18605359
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||| || ||||| ||||||||| ||  ||||| ||||||| |||||||||||||||||    
T  18605427 gggtagcacctatattataaaagatggtagaaactaaacttaggtggtttgagcatgtagagagaagac 18605359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 18637563 - 18637631
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||| || ||||| ||||||||| ||  ||||| ||||||| |||||||||||||||||    
T  18637563 gggtagcacctatattataaaagatggtagaaactaaacttaggtggtttgagcatgtagagagaagac 18637631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 18650997 - 18651065
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||| || ||||| ||||||||| ||  ||||| ||||||| |||||||||||||||||    
T  18650997 gggtagcacctatattataaaagatggtagaaactaaacttaggtggtttgagcatgtagagagaagac 18651065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 6420749 - 6420702
Alignment:
Q  52 gttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  6420749 gttggtggaaactaggcttaggtggtttgggcatgtagagagaagact 6420702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 27893840 - 27893769
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtaga 90  Q
    ||||||||| | |||| |||||||||||||| || |||| |||||||||||||| |||||||  ||||||||    
T  27893840 agagagagttgaggtaacacctatagtagaatagatggtggaaaataggcttaggtggtttgaacatgtaga 27893769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 37439647 - 37439580
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttag 72  Q
    ||||||| ||||||||||||||| || ||||||||||| ||||||||| || |  |||||||||||||    
T  37439647 aatgacaacattagagagagagttggagtagcacctatggtagaaaagatgatgtaaaataggcttag 37439580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 5418071 - 5418149
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggc-ttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||||||||||| | ||||||||  |||| |||||||||| |||||| ||||| ||||||||| |||||||    
T  5418071 agagagttggggtagcacctcttgtagaaaatatggtggaaaataggctttagattgtttgtgcatgtagaaagaagac 5418149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 1740789 - 1740862
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtaga 90  Q
    |||||||||||  |||||||| ||| |||||||||  |||| |||| ||||||||| ||||||||| |||||||    
T  1740789 agagagagagtttgggtagcatctacagtagaaaatatggtggaaactaggcttaggtggtttgggtatgtaga 1740862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 30200253 - 30200176
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||  ||||| ||||||||||||||||| |||| |||| ||||||||| || ||| |||||||| | |||||||    
T  30200253 agagagttagggtaacacctatagtagaaaagatggtggaaactaggcttaggtgattttggcatgtaaatagaagac 30200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 9797995 - 9797916
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||| |||||||  ||||| ||||||||| |  | |||||| ||||||| |||||||| |||||||||||||||||    
T  9797995 agagagagttggggtagtgcctattgtagaaaagattct-gaaaattggcttaggtggtttggacatgtagagagaagact 9797916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 40830224 - 40830292
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||| | ||||||| ||||||||| |   ||||| ||||||||||||| |||||||||||    
T  40830224 gggtagcacctattgaagaaaagatggtagaaactctacttaggtggtttgggcatgaagagagaagac 40830292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 24549945 - 24549906
Alignment:
Q  59 gaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  24549945 gaaactaggcttaggtggtttgggcatgtagagagaagac 24549906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 30914755 - 30914680
Alignment:
Q  24 gagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||| ||||||| |||||| ||||||||  ||||||||| | ||||| | |||||||||||||||  |||||||||    
T  30914755 gagttggggtagtacctattgtagaaaaaatggtagaaactcggctttggtggtttgggcatgtaacgagaagact 30914680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 38135476 - 38135425
Alignment:
Q  47 gaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||| |||| |||||||||||||| |||||||| |||||||| |||||||    
T  38135476 gaaaagatggtggaaaataggcttaggtggtttggacatgtagacagaagac 38135425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 42177321 - 42177255
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggctta 71  Q
    |||||||  |||||||||||||| | |||| ||||||||||||||||| ||||  ||| ||||||||    
T  42177321 aatgacaatattagagagagagttgaggtatcacctatagtagaaaagatggtgaaaactaggctta 42177255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 46989887 - 46989961
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgt 87  Q
    ||||||||| ||||| |||||||||||||| ||||||||| |||| |||  |   ||||| ||||||||||||||    
T  46989887 cattagagatagagttggggtagcacctattgtagaaaagatggttgaatttcatcttaggtggtttgggcatgt 46989961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 6429225 - 6429156
Alignment:
Q  30 gggtagcacctatagtagaaaagtt-ggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||||||||||   |||  |||||||| |||| |||||||||||||  ||||||||||    
T  6429225 gggtagcacctatagtagaaaaggcaggtgaaaaataggtttaggtggtttgggcatgccgagagaagac 6429156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 23720829 - 23720898
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatg 86  Q
    |||||||||||  |||| |||||||||||||||||| |||  || | ||| ||||| |||||||||||||    
T  23720829 agagagagagttagggttgcacctatagtagaaaagatggcggagactagccttaggtggtttgggcatg 23720898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 1210720 - 1210832
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  1210720 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 1210819  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  1210820 gatgccgtggtaa 1210832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 32231261 - 32231154
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac-tgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32231261 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaaattggtagaaaataggcttagatggtttgggcatgtagagagaagacttgta 32231162  T
Q  103 gatgccgt 110  Q
    ||||||||    
T  32231161 gatgccgt 32231154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 9592709 - 9592821
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| | |||    
T  9592709 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagtttgtagaaaataggcttagatgggttgggcatgtagagagaagacccgta 9592808  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  9592809 gatgccgtggtaa 9592821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 30202437 - 30202325
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  30202437 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaggttggtagaaaataggcttagatggtttggtcatgtagagagaagacccgta 30202338  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  30202337 gatgccgtggtaa 30202325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 34792656 - 34792544
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||    
T  34792656 gaatgaaaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaagtaggcttagatggtttgggcatgtagagagaagacccgta 34792557  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  34792556 gatgccgtggtaa 34792544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 51441072 - 51440960
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |    
T  51441072 gaatgacaccattagagagagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgga 51440973  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  51440972 gatgccgtggtaa 51440960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 15085909 - 15086016
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  15085909 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgta 15086008  T
Q  103 gatgccgt 110  Q
    ||||||||    
T  15086009 gatgccgt 15086016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 8671895 - 8672005
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  8671895 gaatgacaccattagag--agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgta 8671992  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  8671993 gatgccgtggtaa 8672005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 696244 - 696356
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| | |||    
T  696244 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggcttggacatgtagagagaagacccgta 696343  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  696344 gatgccgttgtaa 696356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 4001762 - 4001650
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| | |||    
T  4001762 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagaggagacccgta 4001663  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  4001662 gatgccgttgtaa 4001650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 22090069 - 22090183
Alignment:
Q  4 gaatgacaccattagag--agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctg 100  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |    
T  22090069 gaatgacaccattagagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagggagaagacccg 22090168  T
Q  101 tagatgccgtggtaa 115  Q
    |||||||||||||||    
T  22090169 tagatgccgtggtaa 22090183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 32083052 - 32082940
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| | |||    
T  32083052 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgcagagaggagacccgta 32082953  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  32082952 gatgccgttgtaa 32082940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 51602033 - 51602143
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  51602033 gaatgacaccattagagagag--tgagggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 51602130  T
Q  103 gatgccgtggtaa 115  Q
    |||| ||||||||    
T  51602131 gatgtcgtggtaa 51602143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 8391747 - 8391859
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| ||| | |||    
T  8391747 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagattgtttggacatgtagagaggagacccgta 8391846  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  8391847 gatgccgttgtaa 8391859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 49347700 - 49347588
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| | |||    
T  49347700 gaatgacaccattggagagagagtaggggtagcatctatagtagaaaagttggtagaaaataggcttagatggtttggtcatgcagagagaagacccgta 49347601  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  49347600 gatgccgtggtaa 49347588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 9509294 - 9509387
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||    
T  9509294 aatgacaccattagagagagagttggggtagcacctatagtagaaaagatggtaaaaaataggcttaggtagtttgggcatgtagagagaagac 9509387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 4029112 - 4029209
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| ||||||||||||||| | ||||||||||||||||    
T  4029112 agagagagtgggggtagcacctagagtagacaagttggtagaaaataggcttagaaggtttggacatgtagagagaagacccgtagatgccgtggtaa 4029209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 38807981 - 38807884
Alignment:
Q  5 aatgacaccattagagagagag----tgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  38807981 aatgacaccattagagagagagagaatgggggtagcacctatagtagaaaagttggtagaaaatagacttagatggtttaggcatgtaaagagaagac 38807884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 43240688 - 43240592
Alignment:
Q  4 gaatgacaccattagagag--agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||||||||||||||||    
T  43240688 gaatgacgccattagagagagagagtgggggtagcacctatagtagaaaaattgatagaaaataggcttagatagtttgagcatgtagagagaagac 43240592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 1661405 - 1661499
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||||||||    
T  1661405 gaatgacaatatttgagagagagttggggtagcacctatagtagaaaagatggtggaaaataggctcagatggtttgagcatgtagagagaagac 1661499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 27848112 - 27848008
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||| ||||||||||||||||||| | |||||||||| | ||||||||| |||||||||||| |||||| ||||||||||||| |||||||||| |||||    
T  27848112 gaataacaccattagagagagagttgtggtagcacctgtggtagaaaagatggtagaaaataagcttaggtggtttgggcatgcagagagaagacctgta 27848013  T
Q  103 gatgc 107  Q
    |||||    
T  27848012 gatgc 27848008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 39140495 - 39140589
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||| ||||||| ||||||||| || ||||||||||||||||||||| ||| | ||||| ||||||| |||||||||||||||||||||||||    
T  39140495 gaatgaaaccattacagagagagttggcgtagcacctatagtagaaaagatggcaaaaaattggcttaggtggtttgggcatgtagagagaagac 39140589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 43423703 - 43423789
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||| |||| ||||||||| |||||||| |||||||||||||||||    
T  43423703 cattagagagagagttggggtaacacctatagtagaaaagatggtggaaactaggcttaggtggtttggccatgtagagagaagact 43423789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 48431688 - 48431618
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||    
T  48431688 ggggtagcccctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagagaagact 48431618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 2544587 - 2544668
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||| || ||||| |||||||| ||||||||||||||||    
T  2544587 agagagagagttggggtagcacctatagtagaaaagatggtggaaaacagacttaggtggtttggacatgtagagagaagac 2544668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 9599701 - 9599620
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcat 85  Q
    |||||||| ||||||||||||||| || ||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||    
T  9599701 gaatgacatcattagagagagagttggagtaacacctatagtagaaaagatggtagaaaataggcttaggtggttcgggcat 9599620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 36624173 - 36624078
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagactg 100  Q
    |||||||||||||||||||||||| ||||||| || |  |||||||||| | ||||||||||||||||| |||||| ||||||| ||||||||||||    
T  36624173 gaatgacaccattagagagagagttggggtagtacttgcagtagaaaagattgtagaaaataggcttaggtggttt-ggcatgtcgagagaagactg 36624078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 52561918 - 52561843
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggttt 79  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| | || |||||||||||||||| ||||||    
T  52561918 gaatgacaccattagagagagagttggggtagcacctttagtagaaatgatgatagaaaataggcttaggtggttt 52561843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 40416359 - 40416448
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag-actgtagat 105  Q
    ||||||||||| || ||||||||||||||||||||| |||| ||||  |||||||| |||||| |||||||||||||||| |||||||||    
T  40416359 agagagagagttggagtagcacctatagtagaaaagatggtggaaacgaggcttaggtggtttaggcatgtagagagaagaactgtagat 40416448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 40419615 - 40419708
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| ||||||||||||||| ||||||| || |||||||||| || |||||| || ||| ||||  |||||||||||||||||||||||||    
T  40419615 aatgacaacattagagagagagttggggtagaacttatagtagaatagatggtagtaactagacttaagtggtttgggcatgtagagagaagac 40419708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 37463178 - 37463101
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggc 83  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||||   ||||||||||||||||| ||||||||||    
T  37463178 gaatgacaccattagagagag--ttggggtagcacctatagtagaaaagacagtagaaaataggcttaggtggtttgggc 37463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 35828856 - 35828763
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||  ||||||||||||||  | ||||||||||| ||||||||| |||| ||||||||| |||| |||||||| | ||||||||||||||    
T  35828856 aatgacaatattagagagagagtttgagtagcacctatggtagaaaagatggtggaaaatagggttaggtggtttggacgtgtagagagaagac 35828763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 51812511 - 51812591
Alignment:
Q  15 ttagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||||||||||| |||||| || |||||||||||||| |||| |||| ||||||||  || |||||||||||||||||||    
T  51812511 ttagagagagagttggggtaacaactatagtagaaaagatggtggaaactaggcttatgtgatttgggcatgtagagagaa 51812591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 38868858 - 38868948
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||||| ||||| |||||| || || |||||||||||  |||||||| |||| |||| | ||||||| ||||||||||||||||||||||    
T  38868858 aatgacaacattaaagagagggttggagtagcacctatcatagaaaagatggtggaaactcggcttaggtggtttgggcatgtagagagaa 38868948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 52073753 - 52073675
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaa-taggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||||||||||||| ||||||||| ||||| |||| | ||||||| |||||||| ||||||||||||||||    
T  52073753 agagagttggggtagcacctattgtagaaaagatggtaaaaaactcggcttaggtggtttggacatgtagagagaagac 52073675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 14226108 - 14226047
Alignment:
Q  32 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagag 93  Q
    |||||||||||  |||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  14226108 gtagcacctatcatagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagag 14226047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 26016421 - 26016506
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||| |||||| ||||||||  ||||||| ||||||||| |||  |||| ||||||||| ||||||| |||||||    
T  26016421 cattagagagagagttggggtaacacctatatgagaaaagatggtagaaactagatttaggtggtttgggtatgtagaaagaagac 26016506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 36340097 - 36340016
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| || |||||||||||| |||||||| |||| ||||||||| |||| |||||| | |||| |||||||||||    
T  36340097 agagagagagttggtgtagcacctatattagaaaagatggtggaaaataggtttaggtggtttagacatggagagagaagac 36340016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 5338727 - 5338803
Alignment:
Q  32 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgc 107  Q
    ||||||||||||||||||||| |||| |||| |  |||||| ||||||||||||| |||||||||| ||||||||||    
T  5338727 gtagcacctatagtagaaaagatggtggaaactgagcttaggtggtttgggcatgcagagagaagacctgtagatgc 5338803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 32404807 - 32404739
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||| ||||||||||| ||||| |||| |||||||||||||| ||||||||  |||||||||||||||    
T  32404807 gggtaacacctatagtaaaaaagatggtggaaaataggcttaggtggtttggatatgtagagagaagac 32404739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 37263325 - 37263397
Alignment:
Q  23 agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||| |||||||||||||||||||||||| | ||||||| ||| |||   ||||||||||||||||||||||    
T  37263325 agagttggggtagcacctatagtagaaaagatagtagaaactagacttcagtggtttgggcatgtagagagaa 37263397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 13828009 - 13827930
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| | |||| ||||||||||||||||||| |||| |||| |||| |||| |||||||  ||||||||||||||||    
T  13828009 agagagatttggggcagcacctatagtagaaaagatggtggaaactagggttaggtggtttgaacatgtagagagaagac 13827930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 25979495 - 25979444
Alignment:
Q  47 gaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  25979495 gaaaagttagtagaaactaggcttagatggtttggacatgtagagagaagac 25979444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 3819150 - 3819068
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||||| | |||||||||||| ||||||||| |||| | || ||| ||||  ||||||||||||||||| ||||||||    
T  3819150 agagagagagttgaggtagcacctatggtagaaaagatggtggtaactagacttaagtggtttgggcatgtagaaagaagact 3819068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 17275180 - 17275262
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||||||||||| | ||||||||  |||||||||||||| | || |||| | ||||||| ||||||| ||||||||||||||    
T  17275180 cattagagagagatttggggtagcttctatagtagaaaagattgtggaaacttggcttaggtggtttgtgcatgtagagagaa 17275262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 8343140 - 8343071
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||| ||||| ||||||||||| |||| |||| ||||||||| |||  ||||||||||||||||||||    
T  8343140 ggggtaacacctttagtagaaaagatggtggaaactaggcttaggtggactgggcatgtagagagaagac 8343071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 18469387 - 18469293
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagactg 100  Q
    ||||||||| |||||||  ||||| |||||| ||||||||||||| ||| || ||||||||||| |||| | |||||| ||| ||| ||||||||||    
T  18469387 gaatgacacaattagag--agagttggggtaacacctatagtagagaagatgatagaaaataggattaggtagtttggacatatagtgagaagactg 18469293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 16943160 - 16943243
Alignment:
Q  14 attagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||| |||||||| ||||||| |||||||||||||||| |||| |||| |||  |||| |||||||||| ||||| ||||||||    
T  16943160 attagggagagagttggggtagtacctatagtagaaaagatggtggaaactagatttag-tggtttgggcgtgtagggagaagac 16943243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 27637913 - 27637846
Alignment:
Q  31 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||| ||||||| || |||||| ||| ||||| || |||||||||||||||| |||||    
T  27637913 ggtagcacctatagcagaaaagatgatagaaactagacttaggtgttttgggcatgtagagaaaagac 27637846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 41611807 - 41611874
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||| |||| |||||||| |||||||||||||| |||  ||||||| | ||||||||||||||    
T  41611807 gggtagcacttatattagaaaagatggtagaaaataggtttatgtggtttgagaatgtagagagaaga 41611874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 6025589 - 6025671
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||| ||||| ||| ||| |||||||||||||| ||| | |||| |||| ||||||||||||  ||||||||||| ||||||    
T  6025589 cattaaagagatagttgggttagcacctatagtaaaaacgatggttgaaactaggcttagatgacttgggcatgtacagagaa 6025671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 13827854 - 13827784
Alignment:
Q  27 tgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||| ||||||||||||||||  ||| |||| |||| | || |||||||| |||||||||||||||    
T  13827854 tgggggtagtacctatagtagaaaagacggtggaaactagggtaaggtggtttggacatgtagagagaaga 13827784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 18793286 - 18793201
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||| |||||| || ||||||| || ||| ||||||||| ||||||||| ||| ||||| || ||| |||||| |||||||||||    
T  18793286 cattaaagagagggttggggtaggacttattgtagaaaagatggtagaaactagacttagttgattttggcatgcagagagaagac 18793201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 34827394 - 34827317
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||||||| | ||||| || |||| |||||||||||||||||   |||||||| |||||| |||||||||    
T  34827394 agagagttggggtagcgcatatagaagtaaagatggtagaaaataggcttctttggtttggacatgtaaagagaagac 34827317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 990732 - 990672
Alignment:
Q  38 cctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||| |||||| ||||||||| || |||||| || ||||| |||||||||    
T  990732 cctatagtagaaaagatggtaggaaataggctcaggtggtttaggtatgtaaagagaagac 990672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 10272260 - 10272328
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||| |||||| ||||||||||| ||||||||| ||| || |  |||||| ||||||||||||||||||    
T  10272260 gggttgcacctgtagtagaaaagatggtagaaactagactaaagtggttttggcatgtagagagaagac 10272328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 19936515 - 19936571
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatg 86  Q
    ||||||||||||||| | ||||| |||||||||||||| |||  |||||||||||||    
T  19936515 gggtagcacctatagcaaaaaagatggtagaaaataggtttatgtggtttgggcatg 19936571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 17267994 - 17267927
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttg 80  Q
    ||||||||||||| | ||||||||| |||||||||||||| | || |||| | ||||||| |||||||    
T  17267994 cattagagagagatttggggtagcatctatagtagaaaagattgtggaaacttggcttaggtggtttg 17267927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 17815490 - 17815537
Alignment:
Q  47 gaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 94  Q
    |||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  17815490 gaaaagatggtggaaactaggcttagttggtttgggcatgtagagaga 17815537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 23791936 - 23791857
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||  ||||||| ||| || ||||||||| ||||||| | ||  ||||| ||||||| |||||||||||||||||    
T  23791936 agagagagatggggtaggacccatggtagaaaagatggtagatactaaacttaggtggtttgtgcatgtagagagaagac 23791857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 31274613 - 31274578
Alignment:
Q  55 ggtagaaaataggcttagatggtttgggcatgtaga 90  Q
    ||||||||||||||||||||||||||| ||||||||    
T  31274613 ggtagaaaataggcttagatggtttggacatgtaga 31274578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 44905603 - 44905548
Alignment:
Q  40 tatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||||||||||  ||||||||||| |||||| |||||||| |||||| ||||||    
T  44905603 tatagtagaaaagacggtagaaaatatgcttaggtggtttggacatgtaaagagaa 44905548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 52561841 - 52561802
Alignment:
Q  59 gaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  52561841 gaaaataggcttaggtggtttcggcatgtagagagaagac 52561802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 97
Target Start/End: Complemental strand, 7762689 - 7762651
Alignment:
Q  59 gaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  7762689 gaaaatatgattagatggtttgggcatgtagagagaaga 7762651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 7921843 - 7921901
Alignment:
Q  37 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||||||||||||| |||| |||| |||| |||  |||||||| |||||||||||||    
T  7921843 acctatagtagaaaagatggtggaaactaggtttatgtggtttggacatgtagagagaa 7921901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 16822289 - 16822235
Alignment:
Q  44 gtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||| ||| ||||||||| | ||||||| |||||||| ||||||||||||||||    
T  16822289 gtagacaagatggtagaaactcggcttaggtggtttggacatgtagagagaagac 16822235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 19908345 - 19908255
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||||  |||| ||||||||| | |||||||||||||||| ||||| |||  ||||  | | |||| || |||||||||||||||||||    
T  19908345 aatgacaaaattaaagagagagttgtggtagcacctatagtaaaaaagatgggggaaaccaagtttaggtgatttgggcatgtagagagaa 19908255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 4380013 - 4380081
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||| |||||||||||||| |||| |||| || | |||| ||||||   |||||||||||||||    
T  4380013 ggggtagcaactatagtagaaaagatggtggaaactaaggttaggtggtttatacatgtagagagaaga 4380081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 10569312 - 10569280
Alignment:
Q  66 ggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||||||||||||||||||||||||    
T  10569312 ggcttaggtggtttgggcatgtagagagaagac 10569280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 27703995 - 27704079
Alignment:
Q  15 ttagagagagagtgggggtagcacct-atagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||| ||||||  |||||| ||||| |||||||||||| |||| ||||| | |||||  |||||||| |||||||||| |||||    
T  27703995 ttagaaagagagatggggtaacaccttatagtagaaaagatggtggaaaacatgcttatgtggtttggacatgtagagaaaagac 27704079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 43954188 - 43954264
Alignment:
Q  18 gagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 94  Q
    |||||||||| |||||||| |||||  |||||||  || | |||| | ||||||| ||||||| |||||||||||||    
T  43954188 gagagagagttggggtagcgcctatcttagaaaatatgatggaaacttggcttaggtggtttgagcatgtagagaga 43954264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 24178482 - 24178597
Alignment:
Q  1 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ct 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |     
T  24178482 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtggagagaagaccc 24178581  T
Q  100 gtagatgccgtggtaa 115  Q
    ||||||||||||||||    
T  24178582 gtagatgccgtggtaa 24178597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 4496359 - 4496471
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||    
T  4496359 gaatgacacctttagagagagagtgggggtagcacctatagtagaaaagctggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 4496458  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  4496459 gatgccgtggtaa 4496471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 38684942 - 38685054
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  38684942 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgta 38685041  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  38685042 gatgccgtcgtaa 38685054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 1275240 - 1275351
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  1275240 gaatgacaccattagagagagagtgggg-tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgta 1275338  T
Q  103 gatgccgtggtaa 115  Q
     ||||||||||||    
T  1275339 aatgccgtggtaa 1275351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 1287873 - 1287774
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac-tgtagatgccgtggtaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  1287873 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacacgtagatgccgtggtaa 1287774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 12492694 - 12492583
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcaccta---tagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ct 99  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  12492694 gaatgacaccattagagagagagtgggggtagcacctactatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagaccc 12492595  T
Q  100 gtagatgccgtg 111  Q
    ||||||||||||    
T  12492594 gtagatgccgtg 12492583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 2075781 - 2075669
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||    
T  2075781 gaatgacaacattagagagagagtgggggtaacacctacagtagaaaagttggtagacaataggcttagatggtttgggcatgtagagagaagacccgta 2075682  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  2075681 gatgccgtggtaa 2075669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 16347684 - 16347591
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16347684 aatgaaaccattagagagagagcgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagac 16347591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 28977164 - 28977054
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||    
T  28977164 gaatgacaccattagagagag--tgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgtgcatgtagagagaagacccgta 28977067  T
Q  103 gatgccgtggtaa 115  Q
     ||||||||||||    
T  28977066 tatgccgtggtaa 28977054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 3301819 - 3301926
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  3301819 gaatgtcaccattagagagagagtgagggtagcccctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgta 3301918  T
Q  103 gatgccgt 110  Q
    ||||||||    
T  3301919 gatgccgt 3301926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 34273015 - 34273114
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  34273015 agagagagagtgggggtagcacctataatagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacctgcagatgtcgtggtaa 34273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 14665702 - 14665801
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||    
T  14665702 agagagagagtgggggtagcacctatagtagagaagttgatagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgtcgtaa 14665801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 10639272 - 10639391
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctat-------agtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    |||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  10639272 gaatgacaccattagagagagagtggggctagcacctatagactatagtagaaaagttggtagaaaataggcttagatgaattgggcatgtagagagaag 10639371  T
Q  97 a-ctgtagatgccgtggtaa 115  Q
    | ||||||||||| ||||||    
T  10639372 acctgtagatgccatggtaa 10639391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 20456776 - 20456860
Alignment:
Q  32 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||    
T  20456776 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagagaagacccgtagatgccgtggtaa 20456860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 14749291 - 14749376
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||||||    
T  14749291 cattagagagagagttggtgtagcacctatagtagaaaaattggtagaaactagacttagatggtttggacatgtagagagaagac 14749376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 33667209 - 33667285
Alignment:
Q  22 gagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||||||||||    
T  33667209 gagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagac 33667285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15168764 - 15168855
Alignment:
Q  1 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagaga 92  Q
    |||||||||||||||||||| |||   ||||||||||||||||||||||||| |||||||||||||||| || |||||||| ||||| ||||    
T  15168764 taagaatgacaccattagagggagttggggggtagcacctatagtagaaaagatggtagaaaataggctaaggtggtttggacatgttgaga 15168855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 31636212 - 31636133
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||| ||| |||||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||||||||||    
T  31636212 agagaaagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagac 31636133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 26884996 - 26884902
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtag-aaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||| ||||||||||| |||||||| ||||||||||||||| || |||||||||||||||||||||||||  ||||||| |||||||||| ||||    
T  26884996 gaataacaccattagaaagagagtgagggtagcacctatagcaggaaaagttggtagaaaataggcttaggcggtttggacatgtagagataaga 26884902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 36215480 - 36215564
Alignment:
Q  11 accattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||| ||||| ||||    
T  36215480 accattagggagagagtggaggtagcatctatagtagaaaagttggtaggaaatatgcttagatggtttcggcacgtagaaagaa 36215564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 15489789 - 15489706
Alignment:
Q  14 attagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||||||||| ||||||| |||||| ||||||||| |||| |||| |  |||||||||||||||||||||||||||||||    
T  15489789 attagagagagagttggggtagtacctattgtagaaaagatggttgaaactcagcttagatggtttgggcatgtagagagaaga 15489706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 18351190 - 18351120
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca-tgtagagagaagac 98  Q
    |||||||||||||||||||||||  ||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  18351190 ggggtagcacctatagtagaaaatatggtagaaactaggcttaggtggtttgggcattgtagagagaagac 18351120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 2712936 - 2713013
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||||||||||||||||  ||||| ||||||| | ||| ||||| |||||||||||||||||||||||||    
T  2712936 agagagttggggtagcacctatagtctaaaagatggtagagactagacttaggtggtttgggcatgtagagagaagac 2713013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 14667751 - 14667816
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggg 82  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||||| ||||| |||||||||    
T  14667751 agagagagagttggggtagcacctatagtagaaaagatggtggaaaatagacttaggtggtttggg 14667816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 28676596 - 28676664
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||| |||||||||||||| |||| |||||||| ||||| |||||| ||||||||||||||||||    
T  28676596 gggtagcagctatagtagaaaagatggtggaaaatagtcttaggtggtttcggcatgtagagagaagac 28676664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 418279 - 418201
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttaga--tggtttgggcatgtagagagaa 95  Q
    ||||||||| |||||||||||||| ||||||||| ||| ||||| | ||||||||  ||||||||||||||||||||||    
T  418279 agagagagttggggtagcacctatggtagaaaagatggcagaaatttggcttagacctggtttgggcatgtagagagaa 418201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 43558121 - 43558030
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac-tgtagatgc 107  Q
    |||||||||||  |||||||| ||||| |||||||| |||| |||| || |||||| |||||||||||| |||||||||||| |||||||||    
T  43558121 agagagagagttagggtagcatctataatagaaaagatggtggaaactaagcttaggtggtttgggcatatagagagaagacttgtagatgc 43558030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 6888969 - 6889063
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||||  |||| ||| ||||| |||||||||| |||||  |||||| |||| |||||||||||||  |||||||| |||||||||||||||||    
T  6888969 aatgacaatattacagaaagagttggggtagcacgtatagaggaaaagatggtggaaaataggcttaagtggtttggacatgtagagagaagact 6889063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 10083021 - 10082951
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||| ||||||||||||||||| ||||||||| ||| ||||  |||||| |||||||||||||||||||    
T  10083021 ggggtatcacctatagtagaaaagatggtagaaactagacttaagtggtttcggcatgtagagagaagact 10082951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 79501 - 79582
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| ||||||| |||||||||||||||| |||| ||||| |   |||| |||||||| ||||||||||||||||    
T  79501 agagagagagttggggtagtacctatagtagaaaagatggtggaaaacataattaggtggtttggacatgtagagagaagac 79582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 27868 - 27944
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttg 80  Q
    ||||||||||||| || | |||||  ||||||||||||||||||||||| || | |||||||||||||| |||||||    
T  27868 gaatgacaccatttgaaaaagagttagggtagcacctatagtagaaaagatgatggaaaataggcttaggtggtttg 27944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 43475243 - 43475318
Alignment:
Q  32 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatg 106  Q
    ||||||||||||||||||||| |||| |||| ||||||||| ||||||||| ||  |||||||||| |||||||||    
T  43475243 gtagcacctatagtagaaaagatggtggaaactaggcttaggtggtttgggtattcagagagaagacctgtagatg 43475318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 6859357 - 6859451
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||||  |||||| ||||||| |||||||||||||||||  | ||| |||| ||||| |||| ||| |||||||| || ||||||||||||||    
T  6859357 aatgacaatattagacagagagttggggtagcacctatagtgaagaagatggtggaaaacaggcataggtggtttggacacgtagagagaagact 6859451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 7359555 - 7359474
Alignment:
Q  15 ttagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||||||||   |||| ||||||||||||||||  |||| ||||||||| |||| |||||| |||||||||||||||||    
T  7359555 ttagagagagagttcaggtaacacctatagtagaaaatatggtggaaaataggtttaggtggttt-ggcatgtagagagaaga 7359474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 11002715 - 11002645
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtag 89  Q
    |||||||||  |||||||||||| |||||||||  ||||||||| ||| ||||| ||||||||||||||||    
T  11002715 agagagagttcgggtagcacctacagtagaaaacatggtagaaactagacttaggtggtttgggcatgtag 11002645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 37065533 - 37065597
Alignment:
Q  33 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||||||||||||||| ||||||||| ||| ||| | |  |||||||||||||||||||||    
T  37065533 tagcacctatagtagaaaagatggtagaaactagacttgggtcatttgggcatgtagagagaaga 37065597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 41833874 - 41833795
Alignment:
Q  21 agagagtgggggtagcacctatagta--gaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||||||||||||| |||  |||||| |||| ||| ||| |||||| ||||||||||||||||||| |||||    
T  41833874 agagagttggggtagcacctatggtatagaaaagatggtggaacatatgcttaggtggtttgggcatgtagagacaagac 41833795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 42199299 - 42199355
Alignment:
Q  42 tagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| |||| |||| ||| ||||| |||||||||||||||||||||||||    
T  42199299 tagtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagac 42199355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 1525651 - 1525713
Alignment:
Q  36 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| ||||||||| ||||||||| ||| ||||| ||| |||| ||||||||||||||||    
T  1525651 cacctattgtagaaaagatggtagaaactagacttaggtggcttggacatgtagagagaagac 1525713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 21093772 - 21093822
Alignment:
Q  49 aaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||| |||||||||||||| | |||||||||||||||| |||||||    
T  21093772 aaagttggtggaaaataggcttaggtagtttgggcatgtagagggaagact 21093822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 219760 - 219692
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttag 72  Q
    |||||||| |||| |||||||||| |||||||||||||| || |||||| |||| |||| | |||||||    
T  219760 gaatgacaacattggagagagagttggggtagcacctatcgttgaaaaggtggtggaaacttggcttag 219692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 21952364 - 21952424
Alignment:
Q  36 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    ||||||||||||||||| ||| ||||| ||| || || |||||||| ||||||||||||||    
T  21952364 cacctatagtagaaaagatggcagaaactagactcaggtggtttggacatgtagagagaag 21952424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 32516546 - 32516606
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggttt 79  Q
    ||||||||| || ||| ||| ||||||||||||| |||| |||||||||||||| ||||||    
T  32516546 agagagagttggagtaacacttatagtagaaaagatggtggaaaataggcttaggtggttt 32516606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 42504490 - 42504446
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtaga 48  Q
    |||||||| ||| |||||||||||||||||||||| |||||||||    
T  42504490 gaatgacatcatcagagagagagtgggggtagcacttatagtaga 42504446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 4026627 - 4026548
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||| |||||| ||| || |||| ||||| |||| |||| ||| ||||| |||||||| ||||||||||| ||||    
T  4026627 agagagagttggggtaacacgtaaagtaaaaaagatggtggaaactagtcttaggtggtttggacatgtagagaggagac 4026548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 38341712 - 38341641
Alignment:
Q  16 tagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgt 87  Q
    |||||||  ||| ||||||||| ||||||||||||||   || |||||||||||||| ||||||||| ||||    
T  38341712 tagagaggaagttggggtagcagctatagtagaaaagacagtggaaaataggcttaggtggtttgggtatgt 38341641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 38501668 - 38501613
Alignment:
Q  61 aaataggcttagatggtttgggcatgtagagagaagac-tgtagatgccgtggtaa 115  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||||||| ||||    
T  38501668 aaataggtttagatggtttggacatgtaaagagaagacttgtagatgccgtcgtaa 38501613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 37124559 - 37124609
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggctta 71  Q
    ||||||| ||||||||||||||||| |||||| || | |||||||||||||    
T  37124559 agagagtcggggtagcacctatagttgaaaagatgatggaaaataggctta 37124609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 38684471 - 38684549
Alignment:
Q  20 gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||  ||||||||||||||||| || || |||| |||| ||  |||| |||||||  |||||||||||||||||    
T  38684471 gagagagtcagggtagcacctatagtataatagatggtggaaactaaacttaaatggtttcagcatgtagagagaagac 38684549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 15986992 - 15986951
Alignment:
Q  56 gtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||||||| |||| |||||||||| |||||||||||||    
T  15986992 gtagaaaataggtttaggtggtttgggcgtgtagagagaaga 15986951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 27553842 - 27553899
Alignment:
Q  40 tatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||||||  || || |||||| |||||| ||||||| ||||||||||||||||    
T  27553842 tatagtagaaaatatgatataaaataagcttaggtggtttgagcatgtagagagaaga 27553899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 31906636 - 31906729
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||| |||||| ||||||||| | ||  |||||| | ||||||||||||| | |||||  ||||||| |||| | |||||||| ||||||    
T  31906636 gaatgacatcattagggagagagtgagagtgacacctacaatagaaaagttggtcggaaatattcttagatagtttagacatgtagatagaaga 31906729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 20318957 - 20318989
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagc 36  Q
    |||||||||||||||||| ||||||||||||||    
T  20318957 gaatgacaccattagagaaagagtgggggtagc 20318989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 29938126 - 29938202
Alignment:
Q  40 tatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    |||| |||||||| |||| |||||||||||||| ||||||  || | ||||||||||| |||||||| | |||||||    
T  29938126 tataatagaaaagatggtggaaaataggcttaggtggtttaagcctatagagagaagacctgtagattcggtggtaa 29938202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 38578802 - 38578734
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| || || ||||| ||||||||| ||  ||||| ||||||| ||||||| |||||||||    
T  38578802 gggtagcacctctattataaaagatggtagaaactaaacttaggtggtttgagcatgtaaagagaagac 38578734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 36395257 - 36395144
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggc-ttagatggtttgggcatgtagagagaaga-ctgt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  36395257 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggctttagatggtttgggcatgtagagagaagacctgt 36395158  T
Q  102 agatgccgtggtaa 115  Q
    ||||||||||||||    
T  36395157 agatgccgtggtaa 36395144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 36565548 - 36565436
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||    
T  36565548 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaatacccgta 36565449  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  36565448 gatgccgtggtaa 36565436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 40813294 - 40813411
Alignment:
Q  1 taagaatgacaccattagag--agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga- 97  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  40813294 taagaatgacaccattagagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagat 40813393  T
Q  98 ctgtagatgccgtggtaa 115  Q
    ||||||||||||||||||    
T  40813394 ctgtagatgccgtggtaa 40813411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 36545122 - 36545236
Alignment:
Q  4 gaatgacaccattagag--agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctg 100  Q
    |||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  36545122 gaatgacaccattagagagagagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccg 36545221  T
Q  101 tagatgccgtggtaa 115  Q
    |||||||||||||||    
T  36545222 tagatgccgtggtaa 36545236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 2796532 - 2796622
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 94  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2796532 gaatgacaccattagagagagagtgggggtagcgcctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 2796622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 11524031 - 11523918
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggc-ttagatggtttgggcatgtagagagaaga-ctgt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||| | ||    
T  11524031 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagttaataggctttagatggtttgggcatgtagagagaagacccgt 11523932  T
Q  102 agatgccgtggtaa 115  Q
    ||||||||||||||    
T  11523931 agatgccgtggtaa 11523918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 39946832 - 39946944
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  39946832 gaatgacaccattatagaaagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagaaagaagacctgta 39946931  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  39946932 gatgccgtcgtaa 39946944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 18125151 - 18125260
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtag 103  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| | ||||    
T  18125151 aatgacaccattagag--agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagagaagacccgtag 18125248  T
Q  104 atgccgtggtaa 115  Q
    ||||||| ||||    
T  18125249 atgccgtcgtaa 18125260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 42854311 - 42854199
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  42854311 gaatgacaccatcagagagagagtgggggtaacacctatagcagagaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgta 42854212  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  42854211 gatgccgttgtaa 42854199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 12491418 - 12491333
Alignment:
Q  31 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  12491418 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaa 12491333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 8879747 - 8879653
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||    
T  8879747 gaatgacacaattagagagagaatgggggaagcacctatagtagaaaagttggtagaaaatagacttagatgatttgggtatgtagagagaagac 8879653  T

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Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 18752178 - 18752093
Alignment:
Q  6 atgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 94  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  18752178 atgacaccattagagagag--tgggggtagcacctatagtagaaaagttggtagaaaata-gcttagatggtttggacatgtagagaga 18752093  T

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Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 8932679 - 8932770
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||||||||||||  |||||||||||||||| || ||||||||||||||||||||||||  ||||||||||||| |||||||| ||||||    
T  8932679 gaatgacaccattagag--agagtgggggtagcacatacagtagaaaagttggtagaaaatagatttagatggtttggacatgtagaaagaaga 8932770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 45419214 - 45419306
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||||||||   | |||||||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||||||||| |||||    
T  45419214 gaatgacaccattagagagaa--ttggggtagcacctatagtagaaaagatggtataaaatagacttaggtggtttgggcatgtagagataagac 45419306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 32043566 - 32043659
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| ||||||||||||||| |||||| ||||||||||| ||||| ||||||||| ||| ||| | |||||||| ||||||||||||||||    
T  32043566 aatgacaacattagagagagagttggggtatcacctatagtacaaaagatggtagaaactagactttggtggtttggccatgtagagagaagac 32043659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 6510707 - 6510623
Alignment:
Q  32 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    |||||||||||| ||||||||||||||||||| |   ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  6510707 gtagcacctataatagaaaagttggtagaaaacaaatttagatggtttgggcatgtagagagaagatctgtagatgccgtcgtaa 6510623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 12796988 - 12796912
Alignment:
Q  23 agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||| |||| ||||||||| |||||||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  12796988 agagtggaggtaacacctatagaagaaaagttggtagaaaataggcttagatgatttaggcatgcagagagaagact 12796912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 9695607 - 9695698
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    ||||||| ||||| ||||| | | |||||||||||||||||||||||| |||| |||| | ||||||| |||||||||||||||||||||||    
T  9695607 aatgacaacattatagagatatttggggtagcacctatagtagaaaagatggtggaaactcggcttaggtggtttgggcatgtagagagaag 9695698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 13171955 - 13171865
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||||  |||||||||||||| |||| ||||||||||||||||||| |||| ||||||| |||||| |||||||||||| || ||||||    
T  13171955 aatgacaagattagagagagagttggggaagcacctatagtagaaaagatggtggaaaatatgcttaggtggtttgggcatataaagagaa 13171865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 30113504 - 30113416
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagaga 92  Q
    ||||||||  |||||||||||||| |||||| ||| ||||||||||||| |||||||||||||| |||  |||||||||||| ||||||    
T  30113504 gaatgacattattagagagagagtcggggtaacacatatagtagaaaagatggtagaaaataggtttaattggtttgggcatatagaga 30113416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 45512789 - 45512709
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||| |||| |||||||||||||||||||||||| || | ||||||| ||||||||||||||||||| || ||||||||    
T  45512789 agagagggagttggggtagcacctatagtagaaaagatgatggaaaataagcttagatggtttgggcatataaagagaaga 45512709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 2776524 - 2776442
Alignment:
Q  17 agagagagag-tgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||| |||||||||||||||| ||||||| | ||||||||| | ||||||| |||||||||||||| ||||||||||    
T  2776524 agagagagagctgggggtagcacctatcgtagaaatgatggtagaaactcggcttaggtggtttgggcatgttgagagaagac 2776442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 10080211 - 10080120
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| ||||||||||||||| | ||||||| ||| |||||||||| |||| |||| ||||| | |||||||||||||||||||||||||||    
T  10080211 aatgacaacattagagagagagttgaggtagcatcta-agtagaaaagatggtggaaactaggcct-gatggtttgggcatgtagagagaagac 10080120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 37077768 - 37077817
Alignment:
Q  44 gtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagag 93  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37077768 gtagaaaagttggtagaaaatagacttagatggtttgggcatgtagagag 37077817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 44681345 - 44681252
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| ||||||||||| ||| | ||||||||||||| |||||||| |||| ||||||| ||||||| |||||||  || ||||||||||||    
T  44681345 aatgacaacattagagagacagttgtggtagcacctataatagaaaagatggtggaaaataagcttagaaggtttggaaatctagagagaagac 44681252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 7046310 - 7046400
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||||| ||||||||||||||   |||||||||| || ||||||||| |||| |||  | ||||||| ||||||||||||||||||||||    
T  7046310 aatgacaacattagagagagaggctgggtagcaccaatcgtagaaaagatggtggaacctcggcttagctggtttgggcatgtagagagaa 7046400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 18474239 - 18474173
Alignment:
Q  32 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||||||| | |||| |||| ||||||||| ||||||| |||||||||||||||||    
T  18474239 gtagcacctatagtagaaatgatggtggaaactaggcttagttggtttgagcatgtagagagaagac 18474173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 35643872 - 35643814
Alignment:
Q  40 tatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||| |||| ||||||| |||||| |||||||||||||||||||||||||    
T  35643872 tatagtagaaaagatggtggaaaatatgcttaggtggtttgggcatgtagagagaagac 35643814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 29700268 - 29700345
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||||||||||||||||||||||| |||  |||| | ||||||| |||||||||||| |||||| |||||    
T  29700268 agagagttggggtagcacctatagtagaaaagatggaggaaagttggcttaggtggtttgggcatatagagaaaagac 29700345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 39953562 - 39953482
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagag 93  Q
    ||||||||||||||| ||| |||||||||||  ||||||| ||||||||| |||  |||| |||||| |||||||||||||    
T  39953562 cattagagagagagttgggatagcacctatatgagaaaagatggtagaaactagatttaggtggtttaggcatgtagagag 39953482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 10824454 - 10824376
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||| | || |||||||| |||||||||| |||| |||||||||||||| ||||||||| || |||||| ||||||    
T  10824454 agagagttgaggcagcacctaaagtagaaaagatggtcgaaaataggcttaggtggtttgggtatttagagaaaagact 10824376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 21121134 - 21121233
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtag 103  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||            |||| ||||||||||||| ||||||||||||||| | ||||    
T  21121134 aatggcaccattagagagagagtgggggtagcacctatagtacaaaa------------taggtttagatggtttggacatgtagagagaagacccgtag 21121221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 2518689 - 2518604
Alignment:
Q  14 attagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||||||| | | ||||||||||||  |||||||||| |||| ||||||||| |||| |||||||   ||||||||||||||||    
T  2518689 attagagagaaaattggggtagcacctcaagtagaaaagatggtggaaaataggtttaggtggtttgattatgtagagagaagact 2518604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 5908618 - 5908675
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaa 62  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||||| |||| ||||    
T  5908618 aatgacaacattagagagagagttggggtagaacctatagtagaaaagatggttgaaa 5908675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 25985881 - 25985813
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||  ||||||| |||| ||||||||||||    
T  25985881 ggggtagcacctatagtagaaaagtttgtagaaactagactta-ttggtttgtgcatttagagagaagac 25985813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 36143357 - 36143434
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| | |||||||||||||| |||| || |||| |||||||| ||||| |||||||||||| |||||| |||||    
T  36143357 agagagtcgaggtagcacctatagcagaatagatggtggaaaatagacttaggtggtttgggcatttagagaaaagac 36143434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 41444608 - 41444547
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtaga 90  Q
    |||||||||||||||||||||||| |||| |||| |||| |||| |||||||| ||||||||    
T  41444608 ggggtagcacctatagtagaaaagatggtggaaactaggtttaggtggtttggacatgtaga 41444547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 44373761 - 44373838
Alignment:
Q  14 attagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagag 91  Q
    ||||||| |||||| || |||||||||| |||||||||| |||| ||||||||||||   ||||||| ||||||||||    
T  44373761 attagagtgagagttggagtagcacctaaagtagaaaagatggtggaaaataggcttgagtggtttgagcatgtagag 44373838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 6483245 - 6483324
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    ||||||||||| ||||||||   |||||||||||||  ||| |||| | ||||||| |||||||||||||||||| ||||    
T  6483245 agagagagagttggggtagctggtatagtagaaaagagggtggaaacttggcttaggtggtttgggcatgtagagggaag 6483324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 16917160 - 16917251
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    ||||||| |||||| || | ||| ||||||| ||| | |||||||||| ||||  ||| ||||||||| ||||||||||||||| |||||||    
T  16917160 aatgacaacattagtgataaagttggggtagtaccgaaagtagaaaagatggtgcaaactaggcttaggtggtttgggcatgtaaagagaag 16917251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 25985509 - 25985552
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaa 62  Q
    ||||||||| |||||||||||||||||||||||| |||||||||    
T  25985509 agagagagttggggtagcacctatagtagaaaagatggtagaaa 25985552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 33666793 - 33666726
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 84  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||| |   |||| ||||||||||||    
T  33666793 agagagagagttggggtagcacctatcgtagaaaagatggtagaaactctacttaaatggtttgggca 33666726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 34196064 - 34196135
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagaga 92  Q
    ||||||| |||||||||||||||||||||||    ||||||| ||| ||||  |||||||||||||||||||    
T  34196064 agagagttggggtagcacctatagtagaaaaaacagtagaaactagacttatgtggtttgggcatgtagaga 34196135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 41972069 - 41971991
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||  ||||| |||||| |||||||||| |||| ||||||| | |||| |||||||| ||||||||||||||||    
T  41972069 agagagagttagggtaacaccta-agtagaaaagatggtggaaaataagtttaggtggtttggacatgtagagagaagac 41971991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 13589474 - 13589555
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| | |||||| |||||| |||||||  |||||||||||| | |||| |||||||  ||||| ||||||||||    
T  13589474 agagagagagttgaggtagcgcctataatagaaaatatggtagaaaatatgattaggtggtttgaacatgttgagagaagac 13589555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 30748449 - 30748526
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| | ||| |||||  ||||||||||| |||| |||   |||||||| |||||||||||||||||||||||||    
T  30748449 agagagttgtggtcgcaccagtagtagaaaagatggtggaatcaaggcttaggtggtttgggcatgtagagagaagac 30748526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 42493597 - 42493536
Alignment:
Q  20 gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgg 81  Q
    |||||||| |||||| ||||||||||||||||| | || |||| ||||||||| ||||||||    
T  42493597 gagagagttggggtaacacctatagtagaaaagattgtggaaactaggcttaggtggtttgg 42493536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 30559718 - 30559762
Alignment:
Q  54 tggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||    
T  30559718 tggtcgaaaataggcttaggtggtttgggcatttagagagaagac 30559762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 7103274 - 7103313
Alignment:
Q  33 tagcacctatagtagaaaagttggtagaaaataggcttag 72  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  7103274 tagcacctatagtagaaaagatggtagaaactaggcttag 7103313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 9905132 - 9905093
Alignment:
Q  60 aaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  9905132 aaaataggcttaggtggtttggacatgtagagagaagact 9905093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 13986469 - 13986536
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggctta 71  Q
    |||||||| ||||| |||| || | |||||||||||||||||| ||||  ||||||||||||| ||||    
T  13986469 gaatgacatcattaaagagggatttggggtagcacctatagtacaaaatatggtagaaaatagactta 13986536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 25288881 - 25288916
Alignment:
Q  8 gacaccattagagagagagtgggggtagcacctata 43  Q
    ||||||||||||||||| ||||||||||||||||||    
T  25288881 gacaccattagagagagtgtgggggtagcacctata 25288916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 25300216 - 25300251
Alignment:
Q  8 gacaccattagagagagagtgggggtagcacctata 43  Q
    ||||||||||||||||| ||||||||||||||||||    
T  25300216 gacaccattagagagagtgtgggggtagcacctata 25300251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 79024 - 79112
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaata---ggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||  |  ||||| |||||| |||||||| | ||||||||| ||   ||||||| ||||||||||||||| |||||||||    
T  79024 cattagagagagcattcgggtaacacctacagtagaaatgatggtagaaattactaggcttaggtggtttgggcatgtatagagaagac 79112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 26905168 - 26905122
Alignment:
Q  49 aaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||||||||||||||||||||||||| ||| |  ||||||||||||    
T  26905168 aaagttggtagaaaataggcttagatgatttagatatgtagagagaa 26905122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 29645044 - 29645106
Alignment:
Q  36 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| ||||| |||| ||||||||| |||  |||||||| |||||| |||||||||    
T  29645044 cacctatagtataaaagatggtggaaaataggtttaattggtttggacatgtaaagagaagac 29645106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 16351366 - 16351411
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaa 50  Q
    ||||||| ||||||||||||| |  |||||||||||||||||||||    
T  16351366 aatgacaacattagagagagaattagggtagcacctatagtagaaa 16351411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 23023231 - 23023312
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||  ||||||||| ||| ||||||||| |||  |||| ||||||||| | |||||   |||||||||||||||    
T  23023231 agagagagagttcgggtagcacttattgtagaaaagatgggggaaactaggcttaggtagtttgattatgtagagagaagac 23023312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 29520636 - 29520681
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaa 50  Q
    ||||| ||||||||||||||||| ||||| ||| ||||||||||||    
T  29520636 aatgataccattagagagagagttggggtggcatctatagtagaaa 29520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 30456510 - 30456441
Alignment:
Q  13 cattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggg 82  Q
    ||||||||||| |||  | || |||||||||||||||||| ||||||||| ||| ||||  |||||||||    
T  30456510 cattagagagatagttcgagttgcacctatagtagaaaagatggtagaaactagacttatgtggtttggg 30456441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 31443 - 31555
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  31443 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 31542  T
Q  103 gatgccgtggtaa 115  Q
    |||||| ||||||    
T  31543 gatgccatggtaa 31555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 44158 - 44081
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| |||||||||||||||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||    
T  44158 agagagttggggtagcacctatagtagaaaagatggcggaaaataggcttaggtggtttgggcatgtagagagaagac 44081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 8180755 - 8180867
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||     
T  8180755 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataagcttagatggtttgggcatgtagagagaagacctgtg 8180854  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  8180855 gatgccgtggtaa 8180867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 3866047 - 3866159
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | |||    
T  3866047 gaatgacaccattggagagagagtgggggtagcacctatagtaaaaaagttggtagaaaataggcttagatggtttgtgcatgtagagagaagacccgta 3866146  T
Q  103 gatgccgtggtaa 115  Q
    |||| ||||||||    
T  3866147 gatgtcgtggtaa 3866159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 25834654 - 25834768
Alignment:
Q  4 gaatgacaccattagag--agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctg 100  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  25834654 gaatgacaccattagagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacctg 25834753  T
Q  101 tagatgccgtggtaa 115  Q
    | |||||||| ||||    
T  25834754 tggatgccgttgtaa 25834768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 38452996 - 38452880
Alignment:
Q  4 gaatgacaccattagagag----agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-c 98  Q
    |||||||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38452996 gaatgacaccattagagagagagagagtgggggtagcatctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 38452897  T
Q  99 tgtagatgccgtggtaa 115  Q
     ||||||||||||||||    
T  38452896 cgtagatgccgtggtaa 38452880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 38429859 - 38429953
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  38429859 gaatgacaccattagagagagagtgggggcagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtaaagagaagac 38429953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 41197535 - 41197423
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  41197535 gaatgacaccattagagatagagtgagggtagcacctataatagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagatccgta 41197436  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  41197435 gatgccgttgtaa 41197423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 2610576 - 2610675
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac-tgtagatgccgtggtaa 115  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  2610576 agagagagagtgggggtagcacctatagtggaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacacgtagatgtcgtggtaa 2610675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 12734677 - 12734786
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtag 103  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| | ||||    
T  12734677 aatgacaccattagag--agagtgggggtagcacctatagtagaaaaattggtagaaaataggcttagatggtttggacatgtaaagagaagacccgtag 12734774  T
Q  104 atgccgtggtaa 115  Q
    ||||||||||||    
T  12734775 atgccgtggtaa 12734786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 36183426 - 36183538
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||||||||||| | |||    
T  36183426 gaatgacacaattagagagagagtaggggtagcacctatagtagaaaagttggtagaaaataatcttagttggtttcggcatgtagagagaagacccgta 36183525  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  36183526 gatgccgtggtaa 36183538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 41763348 - 41763237
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||| |||||    
T  41763348 gaatgacaccattagagagagagtgggg-taacacctatagtagaaaagttggtagaaaataggcttaggtggtttggacatgcagagagaagacctgta 41763250  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  41763249 gatgccgttgtaa 41763237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 43238379 - 43238296
Alignment:
Q  25 agtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagactgtagatgcc 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  43238379 agtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtaaagagaagaccgtagatgcc 43238296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45367934 - 45367825
Alignment:
Q  1 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ct 99  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||| |     
T  45367934 taagaatgacaccattagagagagtg-gggggtagcacctatagtagaaaagttggtagaaaataaccttagatggtttggacatgtagagagaagaccc 45367836  T
Q  100 gtagatgccgt 110  Q
    |||||||||||    
T  45367835 gtagatgccgt 45367825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 3243958 - 3243848
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||||||| | |||||||||||||||||||||||| |||||||||||||| | |||    
T  3243958 gaatgacaccattagagagag--tgggggtagcacctatagtaaaaaagttgatggaaaataggcttagatggtttgggaatgtagagagaagacccgta 3243861  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  3243860 gatgccgtggtaa 3243848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 11992413 - 11992308
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| | |||    
T  11992413 gaatgacaccattagagagag--tgagggtagcacctatagtagaaaagttggtagaaaataagcttagatggtttggacatatagagagaagacccgta 11992316  T
Q  103 gatgccgt 110  Q
    ||||||||    
T  11992315 gatgccgt 11992308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 4807584 - 4807682
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact-gtagatgccgtggtaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||||||||| ||||||| ||||||||    
T  4807584 agagagagagtgggggtagcacctatagtagaaaagttggtag-aaataggcttagatagtttcggcatatagagagaagactcgtagatgtcgtggtaa 4807682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 18424685 - 18424594
Alignment:
Q  1 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 94  Q
    ||||||||| ||||||||||||||  |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18424685 taagaatgataccattagagagag--tgggtgtagcatctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagaga 18424594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 16097296 - 16097199
Alignment:
Q  5 aatgacaccattagagagag----agtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||| ||||||||||    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  16097296 aatgacaccgttagagagagttagagtgggggtagcacctataatagaaaagttggtagaaaataggcttagatgatttggacatgtagagagaagac 16097199  T

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Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 43752244 - 43752160
Alignment:
Q  14 attagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||    
T  43752244 attagagagagagttggggtagcacctatagtagaaaaggtggtagaaaataggcttaggtgatttggacatgtagagagaagac 43752160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 24583907 - 24583845
Alignment:
Q  36 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24583907 cacctataatagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 24583845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 11412697 - 11412798
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag-actgtag 103  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||| | |||||||||| |||||| ||| |||||||    
T  11412697 aatgacaacattagagagagagttggggtagcacctatagtagaaaatatggtggaaaataggcttaggttgtttgggcatttagagataagaactgtag 11412796  T
Q  104 at 105  Q
    ||    
T  11412797 at 11412798  T

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Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 23997592 - 23997683
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||||| |||||||| |||||||||||||   |||| |||||||||||||| |||||||||||| | |||||||| |||||||    
T  23997592 gaatgacaccattagagatagagtgggtgtagcacctatag---aaaatttggtagaaaatagccttagatggttttgacatgtagaaagaagac 23997683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 451909 - 451843
Alignment:
Q  50 aagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  451909 aagttggtagaaaataggcttagatggtttgggcatgtagagaaaagacccgtagatgccgtggtaa 451843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 37481923 - 37481829
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||| ||||||||||||||| |||||||  ||||||||| ||||| |||| |||  ||||||||| ||||||| ||||||||||||||||||    
T  37481923 aatgacaacattagagagagagttggggtagttcctatagtaaaaaagatggttgaacctaggcttaggtggtttgagcatgtagagagaagact 37481829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 9556674 - 9556582
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| ||||||||||| ||| |||||| ||| |||||||||||| | ||| |||||||||||||| |||||| ||||||||||||||||||    
T  9556674 aatgacaacattagagagaaagttggggtaacacttatagtagaaaaat-ggtggaaaataggcttaggtggtttaggcatgtagagagaagac 9556582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 38434927 - 38435031
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggc-ttagatggtttgggcatgtagagagaagac-tgta 102  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||||| |||| |||| ||| | || | ||||||||||||||| ||||||||| ||||    
T  38434927 aatgacaacattagagagagaattggggtagcacctatagtagaaaagatggtggaaactagactttgggtggtttgggcatgtaaagagaagacttgta 38435026  T
Q  103 gatgc 107  Q
    |||||    
T  38435027 gatgc 38435031  T

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Target: chr2; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 12141539 - 12141613
Alignment:
Q  24 gagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||| |||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||| ||||| |||||||    
T  12141539 gagttggggtagcacctatagtagaaaagatggtggaaaagaggcttaggtggtttgggcacgtagaaagaagac 12141613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 227307 - 227360
Alignment:
Q  14 attagagagagagtgggggtagcacctatagtagaaaagttggtagaaaatagg 67  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  227307 attagagagagagtgggggtagcacctatggtagaaaagtttgtagaaaatagg 227360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 13241051 - 13240958
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| ||||||||||||| | || ||||||  |||  |||||||| |||| |||| ||||||||| |||||||||||||||||||||||||    
T  13241051 aatgacaacattagagagagaattggagtagcaagtatgttagaaaagatggtggaaactaggcttaggtggtttgggcatgtagagagaagac 13240958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 38860158 - 38860242
Alignment:
Q  14 attagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||| |||||||||||| |||||| |||||||||||| | || |||||||||||||| |||||| ||||| |||| |||||||    
T  38860158 attagatagagagtgggggcagcacccatagtagaaaagattgtggaaaataggcttaggtggtttaggcatttagaaagaagac 38860242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 41545378 - 41545474
Alignment:
Q  1 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaa-gttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    |||||||||||||||||| ||||||| | ||||| |||||||| || |||| |||||||||||||| ||||| || ||||| ||||||||| |||||    
T  41545378 taagaatgacaccattagggagagagcgagggtaacacctataataaaaaaagttggtagaaaatatgcttaaatagtttgagcatgtagaaagaag 41545474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 4598856 - 4598774
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||||| ||| ||| | |||||||| ||| |||| ||||||||    
T  4598856 agagagagagttggggtagcacctatagtagtaaagatggtagaaactagactttggtggtttggacatatagaaagaagact 4598774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 7825334 - 7825429
Alignment:
Q  5 aatgacaccattagagagagagtg--ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||| |||||||||||||||  || |||||||||||||| | |||  ||||  |||||| |||||| ||||||| |||||||||||||||||    
T  7825334 aatgacactattagagagagagtgttggagtagcacctatagttgtaaatatggtgaaaaataagcttagttggtttgagcatgtagagagaagac 7825429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 18958907 - 18958980
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgg----gcatgtagagagaagac 98  Q
    |||||||||||||||||||||||| |||| |||||||||||||| ||||||||    ||||| |||||||||||    
T  18958907 ggggtagcacctatagtagaaaagatggtggaaaataggcttaggtggtttggttgggcatgcagagagaagac 18958980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 44438005 - 44437933
Alignment:
Q  27 tgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||||| | ||||||||||||||| ||||||||| ||| | ||| |||||| |||||||||||||||||||    
T  44438005 tgggggtaacccctatagtagaaaagatggtagaaactagacataggtggtttcggcatgtagagagaagact 44437933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 12882322 - 12882267
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggca 84  Q
    |||| |||||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  12882322 ggggcagcacctatactagaaaagatggtagaaaataggcttaggtggtttgggca 12882267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 40759075 - 40759170
Alignment:
Q  5 aatgacaccattagagagagag-tgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||| |||||||||||||| | ||| |||||| ||||||||||||  |||| |||| |||  |||| ||||||| ||||||||||||||||||    
T  40759075 aatgacaacattagagagagaggttgggttagcacttatagtagaaaaaatggtggaaactagagttaggtggtttgtgcatgtagagagaagact 40759170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 3481129 - 3481210
Alignment:
Q  14 attagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||| || | ||||||||||||||||||   ||| |||| ||||| |||||||| |||||||| ||||||||||||||||    
T  3481129 attagagagggaattggggtagcacctatagta---aagatggtggaaaacaggcttaggtggtttggacatgtagagagaagac 3481210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 6218961 - 6219031
Alignment:
Q  23 agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagag 93  Q
    ||||| |||||||||| ||||||||||||| | || || ||||||||||| |||||||| |||||||||||    
T  6218961 agagttggggtagcacttatagtagaaaagatagtggataataggcttaggtggtttggacatgtagagag 6219031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 7326400 - 7326355
Alignment:
Q  71 agatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  7326400 agatggtttgggcatgtagagagaagacctgtagatgccgtggtaa 7326355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 42092507 - 42092584
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    ||||||||| |||||||| |||||| |||||||| ||||||||| || | |||| || | ||||||||||||||||||    
T  42092507 agagagagttggggtagcgcctatactagaaaagatggtagaaactaagattaggtgatctgggcatgtagagagaag 42092584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 19337142 - 19337069
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    ||||||||| ||||||||||||||||||| |||| |||| ||||||| |||||    | |||||||||||||||||||    
T  19337142 agagagagttggggtagcacctatagtagtaaagatggtggaaaataagctta----ggttgggcatgtagagagaag 19337069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 41858744 - 41858800
Alignment:
Q  42 tagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| |||| |||| | |||||||||||||||| ||||||||||||||||    
T  41858744 tagtagaaaagatggtggaaactgggcttagatggtttggacatgtagagagaagac 41858800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 14197437 - 14197374
Alignment:
Q  37 acctatagtagaaaagttggtagaaaataggctt-agatggtttgggcatgtagagagaagact 99  Q
    |||||||||||||||| |||| |||| ||||||| || |||||||||||||||||| |||||||    
T  14197437 acctatagtagaaaagatggtggaaactaggctttaggtggtttgggcatgtagagtgaagact 14197374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 19024156 - 19024239
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgta 88  Q
    ||||||| |||||||||||| ||  |||||||||||||| | |||||| |||| |||| || |||||| |||||||| ||||||    
T  19024156 aatgacaacattagagagagggtttgggtagcacctatatttgaaaagatggtggaaagtaagcttaggtggtttggacatgta 19024239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 907710 - 907748
Alignment:
Q  59 gaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  907710 gaaaatagccttagatggtttgggcatgtagagagaaga 907748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 41330121 - 41330195
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||||| | |||| ||||| ||||||||||| || |  |||||||||||||||||||||  |||||||||||||    
T  41330121 agagagttgaggtaacacctttagtagaaaagatgatcaaaaataggcttagatggtttgaacatgtagagagaa 41330195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 11017306 - 11017383
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||| | |||||||||||||||||||||| | || |||| | ||||||  ||||||||| |||| ||||||||||    
T  11017306 agagagttgaggtagcacctatagtagaaaagatcgtggaaactcggcttaagtggtttgggtatgtggagagaagac 11017383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 13149319 - 13149400
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||| |||| |||||||||||||||   |||||| || |||||||||| ||| | |||| ||| ||||||||||||||||    
T  13149319 agagagtgagttggggtagcacctataaacgaaaagatgatagaaaatagacttcggtggtctggccatgtagagagaagac 13149400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 23714542 - 23714473
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||| ||||||||||||| |||| |||| ||| ||||  | |||| |||||||||||||||||||    
T  23714542 gggtagcacatatagtagaaaagatggtggaaactagacttatgtagtttaggcatgtagagagaagact 23714473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 24102214 - 24102145
Alignment:
Q  30 gggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    ||||||||| ||||||||||||| |||| |||| ||| ||||  | |||| |||||||||||||||||||    
T  24102214 gggtagcacatatagtagaaaagatggtggaaactagacttatgtagtttaggcatgtagagagaagact 24102145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 6238014 - 6237966
Alignment:
Q  50 aagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||| | ||||||||||||||| ||||||||||| ||||    
T  6238014 aagttggtagaaaacatgcttagatggtttggacatgtagagagtagac 6237966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 12905082 - 12905162
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||||||| |||||||||||||||| ||||||| | ||||||  |||  |||| | |||||  |||||||||||||||    
T  12905082 agagagagagttggggtagcacctatagcagaaaagattgtagaagctagaattaggtagtttgaacatgtagagagaaga 12905162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 9578995 - 9578916
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||| |||||  ||| |||||||| |||| || |  ||||||| ||||| |||||||| ||||||||||||||||    
T  9578995 agagagagttggggtgacacatatagtagtaaagatgatgtaaaatagacttaggtggtttggacatgtagagagaagac 9578916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 30743598 - 30743675
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggg 82  Q
    ||||| |||| ||||  ||||||||||| |||||| ||| |||||||| |||||||||| |||  ||||||||||||||    
T  30743598 gaatgtcaccgttaggaagagagtgggg-tagcacttatggtagaaaaattggtagaaattagaattagatggtttggg 30743675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 43832087 - 43832164
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    ||||||||||| |||||| ||||||||||| |||| |  || |||| ||||||||| || |||||||||||| ||||||    
T  43832087 agagagagagttggggtatcacctatagta-aaaaatatgtggaaactaggcttaggtgatttgggcatgtacagagaa 43832164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 18188771 - 18188848
Alignment:
Q  20 gagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||| |||||||||||| |  |||||||| |||| |||  | | ||||| ||||||||||||||| ||||||||    
T  18188771 gagagagttggggtagcacctcttctagaaaagatggtggaagctcgacttaggtggtttgggcatgtaaagagaaga 18188848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 28085351 - 28085445
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28085351 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagac 28085445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 20427943 - 20427831
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||| |||||||| | |||    
T  20427943 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacgtgtatagagaagacccgta 20427844  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  20427843 gatgccgttgtaa 20427831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 5258457 - 5258361
Alignment:
Q  4 gaatgacaccattagagag--agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5258457 gaatgacaccgttagagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagac 5258361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 32755894 - 32755990
Alignment:
Q  4 gaatgacaccattagag--agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  32755894 gaatgacaccattagagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggtcatgtagagggaagac 32755990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 12890559 - 12890643
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgta 88  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12890559 gaatgacaccattagggagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttacatggtttgggcatgta 12890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 14030782 - 14030894
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac-tgta 102  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||| ||||||||| ||||    
T  14030782 gaatgacaccattagagagatagtgggggtagcacctatagtagaaaagttggtagataataggcttaaatggtttggacatgtatagagaagacatgta 14030881  T
Q  103 gatgccgtggtaa 115  Q
     ||||||| ||||    
T  14030882 aatgccgttgtaa 14030894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 30031232 - 30031325
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  30031232 aatgtcaccattagagagggagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgagttggacatgtagagagaagac 30031325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 10100163 - 10100054
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact-gtag 103  Q
    ||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||    
T  10100163 aatgacaccattagagagag--tgggggtcgcacatatagtagaaaagttggtagaaaataagcttagatggtttggacatgtagagagaagactcgtag 10100066  T
Q  104 atgccgtggtaa 115  Q
    ||||||| ||||    
T  10100065 atgccgttgtaa 10100054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 608134 - 608237
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||  || ||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  608134 gaatgacaccattagagagag--tgagggtatcacctatagtagaaaagttgatagaaaataggcttagatggtttggacatgtagagagaagacctgta 608231  T
Q  103 gatgcc 108  Q
    ||||||    
T  608232 gatgcc 608237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 5631810 - 5631891
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  5631810 agagagagagtgggggtaacacctatagtagaaaagttggtagaaaatatgcttagatggtttggacatgtagagagaagac 5631891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 9706751 - 9706827
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttg 80  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9706751 gaatgacaccattagagagagagtggaggtagcacctattgtagaaaagttggtagaaaataggcttagatggtttg 9706827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 35043748 - 35043636
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    ||||||||||||||||| ||||||| |||||| ||||| ||||||||||||||| |||||||||||||||| |||||| ||||||||||||| | | |||    
T  35043748 gaatgacaccattagagggagagtgagggtagtacctaaagtagaaaagttggttgaaaataggcttagattgtttggacatgtagagagaatacccgta 35043649  T
Q  103 gatgccgtggtaa 115  Q
    |||||||| ||||    
T  35043648 gatgccgttgtaa 35043636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 21352129 - 21352050
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  21352129 agagagagtggaggtagcacctatagtagaaaaattggtagaaaataggcttagatgatttggacatgtagagagaagac 21352050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 9594000 - 9593909
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac-tgtagatgc 107  Q
    |||||| |||| |||||||||||  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  9594000 agagagggagttggggtagcaccattagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacatgtagatgc 9593909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 33084043 - 33084127
Alignment:
Q  14 attagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||| ||| ||||| ||||||||| |||||||||||||||    
T  33084043 attagagagagagttggggtagcacctatggtagaaaagatggtagaaactagacttaggtggtttgggaatgtagagagaagac 33084127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 2689646 - 2689722
Alignment:
Q  35 gcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac-tgtagatgccgt 110  Q
    ||||||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  2689646 gcacctatagttgaaaagtttgtagaaaataggcttagatgatttgagcatgtagagagaagacatgtagatgccgt 2689722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 30679417 - 30679475
Alignment:
Q  40 tatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  30679417 tatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagaggagac 30679475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 33496963 - 33497031
Alignment:
Q  31 ggtagcacctatagtagaaaagttggtagaaaa-taggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||    
T  33496963 ggtagcacctatggtagaaaagttagtagaaaaataggcttagatggtttggacatgtagagagaagac 33497031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 5080830 - 5080888
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaa 62  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  5080830 gaatgacaccattagagaacgagtgggggtatcacctatagtagaaaagttggtagaaa 5080888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 24665818 - 24665879
Alignment:
Q  37 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||||||||||  ||||||||||||||||||| |||||||| ||||||||||||||||    
T  24665818 acctatagtagaaaatatggtagaaaataggcttaggtggtttggacatgtagagagaagac 24665879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 8364575 - 8364635
Alignment:
Q  32 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagaga 92  Q
    |||||| |||||||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  8364575 gtagcaactatagtagaaaaggtggttgaaaataggcttaggtggtttgggcatgtagaga 8364635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 2079317 - 2079408
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||  ||||||||| |||| ||| ||||| |||||||||||||| |||| |||||||||||||  |||||| || ||||||||||||||    
T  2079317 aatgacaatattagagagggagttggg-tagcatctatagtagaaaagatggtggaaaataggcttaagtggtttaggtatgtagagagaaga 2079408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 21870363 - 21870299
Alignment:
Q  21 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcat 85  Q
    ||||||| |||||||||||| ||||||||||| ||||||||| | ||||||| ||||||||||||    
T  21870363 agagagttggggtagcacctgtagtagaaaagatggtagaaactcggcttaggtggtttgggcat 21870299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 6641715 - 6641628
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagaga 92  Q
    |||||||  |||||||| ||||| |||||| ||||||||||||||||| ||||||||| ||| ||| | | |||||||||| ||||||    
T  6641715 aatgacaatattagagatagagttggggtatcacctatagtagaaaagatggtagaaactagacttgggttgtttgggcatctagaga 6641628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 28027108 - 28027046
Alignment:
Q  29 ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagaga 92  Q
    |||||||||||||||||||||||  ||||||||||||||||| | |||||||| ||||||||||    
T  28027108 ggggtagcacctatagtagaaaatgtggtagaaaataggctt-ggtggtttggacatgtagaga 28027046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 10617525 - 10617445
Alignment:
Q  17 agagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||| |||||| |||||||||| |||||||||||||   ||||||| ||| ||||| ||||||| ||||||||| |||||||    
T  10617525 agagcgagagttggggtagcacttatagtagaaaag-acgtagaaactagacttaggtggtttgagcatgtagaaagaagac 10617445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 7513683 - 7513607
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaa 95  Q
    |||||||||  ||| |||||||||| |||||||| ||||||||  ||| ||||| ||||||||||||| | ||||||    
T  7513683 agagagagttcggggagcacctataatagaaaagatggtagaacctagacttaggtggtttgggcatgcaaagagaa 7513607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 12134207 - 12134115
Alignment:
Q  5 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||  |||||||||||| | | ||||  |||||||||||||||| |||| |||||||||||||   ||||| |||| ||||||| ||||    
T  12134207 aatgacaatattagagagagaattgaggtacgacctatagtagaaaagatggtggaaaataggcttacggggtttcggcacgtagagaaaaga 12134115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 26291788 - 26291849
Alignment:
Q  36 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact 99  Q
    |||||||| |||||||  ||||||||||||| ||||| ||||||  ||||||||||||||||||    
T  26291788 cacctataatagaaaatatggtagaaaatagacttaggtggttt--gcatgtagagagaagact 26291849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6056080 - 6056032
Alignment:
Q  1 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaa 51  Q
    ||||||||||||||||||||||||  | |||||| ||||||||||||||||    
T  6056080 taagaatgacaccattagagagag--ttggggtaacacctatagtagaaaa 6056032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 9568664 - 9568731
Alignment:
Q  31 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    |||||||| ||||||||||||| || | |||||| | |||||||||||||||||  ||||| ||||||    
T  9568664 ggtagcacttatagtagaaaagatgatggaaaatggacttagatggtttgggcaactagagggaagac 9568731  T

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Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 14389459 - 14389381
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 98  Q
    ||||||||| | |||||||||||| ||||||||| |||| | ||| |  ||||| |||||||| ||||||||||||||||    
T  14389459 agagagagttgaggtagcacctatcgtagaaaagatggt-ggaaacaaacttaggtggtttggacatgtagagagaagac 14389381  T

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Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 5095848 - 5095913
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggct 69  Q
    |||||||  |||||||| ||| || ||| || |||||||||||||| || ||||||||||||||||    
T  5095848 gaatgactacattagagggagtgttgggatatcacctatagtagaatagatggtagaaaataggct 5095913  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 43326 - 43266
Alignment:
Q  37 acctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    ||||||| |||||||  |||| |||| ||||||||| |||| ||| |||||||||||||||    
T  43326 acctataatagaaaaaatggtggaaactaggcttaggtggtctggccatgtagagagaaga 43266  T

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Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 31818526 - 31818582
Alignment:
Q  23 agagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggttt 79  Q
    ||||| |||||||||||||||||| ||||  |||| |||||||| ||||| ||||||    
T  31818526 agagtcggggtagcacctatagtacaaaaaatggtggaaaatagacttaggtggttt 31818582  T

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Target: scaffold0570 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 1253 - 1143
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgta 102  Q
    |||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  1253 gaatgacaccattagagagag--tgagggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagacccgta 1156  T
Q  103 gatgccgtggtaa 115  Q
    |||||||||||||    
T  1155 gatgccgtggtaa 1143  T

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Target: scaffold0024 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 82693 - 82789
Alignment:
Q  1 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||||||||    
T  82693 taagaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaatgggcttagatgatttggacatatagagagaaga 82789  T

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Target: scaffold0113 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 11905 - 11810
Alignment:
Q  4 gaatgacaccattagagagaga--gtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  11905 gaatgacaccatcagagagagatagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagacagaaga 11810  T

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Target: scaffold0157 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 25752 - 25683
Alignment:
Q  4 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttaga 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25752 gaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttaga 25683  T

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Target: scaffold0036 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 4578 - 4466
Alignment:
Q  5 aatgacaccattagagagagagtg-ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagact-gta 102  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||| |||    
T  4578 aatgacaccattagagagagagagtggggtggcacctatagtagaaaagttggtaaaaaataggcttagatagtttgggcatgtagaaagaagactcgta 4479  T
Q  103 gatgccgtggtaa 115  Q
    || || |||||||    
T  4478 gaagctgtggtaa 4466  T

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Target: scaffold0171 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 7431 - 7508
Alignment:
Q  19 agagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 96  Q
    |||||||||  ||||||||| || |||| ||||||| |||||||| | |||||| |||||||||||||||||||||||    
T  7431 agagagagtctgggtagcacgtaaagtacaaaagtttgtagaaaacacgcttagttggtttgggcatgtagagagaag 7508  T

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Target: scaffold0045 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 86877 - 86804
Alignment:
Q  43 agtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga-ctgtagatgccgtggtaa 115  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||| |||||||| | ||||||||||| ||||    
T  86877 agtagaaaagttggtagaaaatagtcttagatagtttggacatgtaaagagaagacccgtagatgccgtcgtaa 86804  T

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Target: scaffold0325 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 11802 - 11866
Alignment:
Q  33 tagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||||| ||||||||| |||||| || | ||||||| ||||||||||||||||||||||||    
T  11802 tagcacctattgtagaaaagatggtaggaactcggcttaggtggtttgggcatgtagagagaaga 11866  T

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Target: scaffold0199 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 14626 - 14678
Alignment:
Q  44 gtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaaga 97  Q
    |||||||||| ||||||||||| |||||||||||  ||| ||||||||||||||    
T  14626 gtagaaaagtaggtagaaaata-gcttagatggtcggggtatgtagagagaaga 14678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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