View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0538_high_26 (Length: 251)

Name: NF0538_high_26
Description: NF0538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0538_high_26
NF0538_high_26
[»] chr7 (34 HSPs)
chr7 (30-251)||(44401207-44401428)
chr7 (174-241)||(28562458-28562525)
chr7 (174-241)||(28628025-28628092)
chr7 (171-251)||(45601596-45601678)
chr7 (187-241)||(38135305-38135359)
chr7 (187-235)||(12966152-12966200)
chr7 (191-241)||(36239888-36239938)
chr7 (189-251)||(1569154-1569218)
chr7 (187-235)||(21517478-21517526)
chr7 (187-242)||(29653637-29653692)
chr7 (187-233)||(30814771-30814817)
chr7 (187-241)||(37976371-37976425)
chr7 (173-235)||(42187564-42187625)
chr7 (200-241)||(24549780-24549821)
chr7 (172-220)||(14593881-14593929)
chr7 (191-235)||(28858185-28858229)
chr7 (173-241)||(42177110-42177178)
chr7 (187-235)||(47796250-47796298)
chr7 (190-241)||(30664707-30664758)
chr7 (183-251)||(43281963-43282033)
chr7 (183-218)||(43282541-43282576)
chr7 (174-220)||(16013406-16013452)
chr7 (187-241)||(30144911-30144965)
chr7 (187-229)||(36136900-36136942)
chr7 (195-241)||(36193759-36193805)
chr7 (187-241)||(40830338-40830392)
chr7 (203-241)||(41483639-41483677)
chr7 (208-241)||(28542036-28542069)
chr7 (202-235)||(40139046-40139079)
chr7 (191-235)||(22174140-22174184)
chr7 (190-234)||(32368436-32368480)
chr7 (191-235)||(32920264-32920308)
chr7 (205-241)||(35922407-35922443)
chr7 (174-230)||(40980031-40980087)
[»] chr4 (41 HSPs)
chr4 (30-167)||(33226405-33226542)
chr4 (183-251)||(33225915-33225983)
chr4 (174-235)||(45204937-45204998)
chr4 (187-234)||(28351695-28351742)
chr4 (187-241)||(10209172-10209226)
chr4 (187-235)||(37488227-37488275)
chr4 (174-241)||(35690394-35690461)
chr4 (183-242)||(42293356-42293415)
chr4 (187-241)||(31961358-31961412)
chr4 (187-241)||(45569101-45569155)
chr4 (187-241)||(47147509-47147563)
chr4 (187-241)||(50680876-50680930)
chr4 (187-241)||(55809082-55809136)
chr4 (187-224)||(8599050-8599087)
chr4 (172-241)||(26356740-26356809)
chr4 (187-232)||(49987544-49987589)
chr4 (187-235)||(21107128-21107176)
chr4 (197-241)||(28550547-28550591)
chr4 (189-241)||(50662526-50662578)
chr4 (191-235)||(51421870-51421914)
chr4 (190-241)||(934523-934574)
chr4 (202-241)||(7544615-7544654)
chr4 (188-231)||(13805367-13805410)
chr4 (191-242)||(17666134-17666185)
chr4 (204-235)||(30621299-30621330)
chr4 (187-241)||(20999136-20999190)
chr4 (200-238)||(25967356-25967394)
chr4 (195-241)||(26024942-26024988)
chr4 (203-241)||(31043224-31043262)
chr4 (187-241)||(31897520-31897574)
chr4 (200-234)||(37042763-37042797)
chr4 (192-242)||(40654218-40654268)
chr4 (187-241)||(46372160-46372214)
chr4 (187-241)||(53540426-53540480)
chr4 (200-241)||(6843764-6843805)
chr4 (201-234)||(30480266-30480299)
chr4 (187-224)||(44719473-44719510)
chr4 (173-241)||(2557764-2557832)
chr4 (205-241)||(26025011-26025047)
chr4 (187-219)||(35555761-35555793)
chr4 (172-224)||(50471647-50471699)
[»] chr6 (13 HSPs)
chr6 (174-241)||(9593800-9593867)
chr6 (187-235)||(8364692-8364740)
chr6 (191-242)||(35199713-35199764)
chr6 (187-241)||(34597-34651)
chr6 (187-241)||(1681613-1681667)
chr6 (187-241)||(31818667-31818721)
chr6 (188-241)||(10617326-10617379)
chr6 (189-234)||(31831958-31832003)
chr6 (187-230)||(2689770-2689813)
chr6 (187-242)||(6055862-6055917)
chr6 (191-241)||(4797066-4797116)
chr6 (188-241)||(38900-38953)
chr6 (174-251)||(5095957-5096036)
[»] chr5 (26 HSPs)
chr5 (190-241)||(29922423-29922474)
chr5 (189-235)||(6889131-6889177)
chr5 (187-241)||(14749443-14749497)
chr5 (174-235)||(28005-28066)
chr5 (188-241)||(32759713-32759766)
chr5 (187-234)||(6859517-6859564)
chr5 (187-242)||(27998577-27998632)
chr5 (202-241)||(28186867-28186906)
chr5 (187-241)||(2066133-2066187)
chr5 (187-241)||(2713080-2713134)
chr5 (183-241)||(9917542-9917600)
chr5 (187-241)||(12576952-12577006)
chr5 (187-235)||(15489590-15489638)
chr5 (187-235)||(38684616-38684664)
chr5 (194-241)||(11675672-11675719)
chr5 (184-235)||(11753137-11753188)
chr5 (187-242)||(28676731-28676786)
chr5 (187-241)||(10082837-10082891)
chr5 (187-221)||(15369909-15369943)
chr5 (191-241)||(17340528-17340578)
chr5 (187-241)||(30588583-30588637)
chr5 (187-241)||(33667571-33667625)
chr5 (202-235)||(9235198-9235231)
chr5 (189-241)||(5303582-5303634)
chr5 (201-241)||(7678628-7678668)
chr5 (190-251)||(14725657-14725720)
[»] chr3 (31 HSPs)
chr3 (174-241)||(39600773-39600840)
chr3 (188-241)||(36820069-36820122)
chr3 (187-241)||(40116560-40116614)
chr3 (187-240)||(2340810-2340863)
chr3 (190-241)||(46431771-46431822)
chr3 (187-241)||(11581580-11581634)
chr3 (187-241)||(19162679-19162733)
chr3 (195-241)||(45289183-45289229)
chr3 (187-241)||(50960729-50960783)
chr3 (187-232)||(21427683-21427728)
chr3 (172-241)||(23534662-23534731)
chr3 (188-241)||(33755434-33755487)
chr3 (187-235)||(40982032-40982080)
chr3 (187-235)||(43308698-43308746)
chr3 (187-235)||(45486950-45486998)
chr3 (187-235)||(54365073-54365121)
chr3 (187-226)||(31261049-31261088)
chr3 (172-235)||(37351528-37351591)
chr3 (187-241)||(19676173-19676227)
chr3 (187-241)||(37228218-37228272)
chr3 (187-241)||(41087880-41087934)
chr3 (191-241)||(41452832-41452882)
chr3 (184-241)||(37598262-37598318)
chr3 (194-235)||(44133942-44133983)
chr3 (200-241)||(49042085-49042126)
chr3 (194-235)||(54920786-54920827)
chr3 (188-232)||(7278596-7278640)
chr3 (187-235)||(34844671-34844719)
chr3 (189-233)||(44443304-44443348)
chr3 (181-217)||(46367504-46367540)
chr3 (205-241)||(47804755-47804791)
[»] scaffold0018 (1 HSPs)
scaffold0018 (187-241)||(178512-178566)
[»] chr2 (37 HSPs)
chr2 (187-241)||(26784432-26784486)
chr2 (172-241)||(26670889-26670958)
chr2 (187-242)||(33287557-33287612)
chr2 (187-241)||(37452318-37452372)
chr2 (188-233)||(33504360-33504405)
chr2 (170-214)||(4481607-4481651)
chr2 (191-235)||(18188892-18188936)
chr2 (187-235)||(19235082-19235130)
chr2 (187-235)||(38435088-38435136)
chr2 (198-236)||(8491266-8491304)
chr2 (187-241)||(12026097-12026151)
chr2 (200-241)||(1626344-1626385)
chr2 (194-235)||(29548735-29548776)
chr2 (193-233)||(38860320-38860360)
chr2 (187-235)||(42092653-42092701)
chr2 (190-233)||(36869997-36870040)
chr2 (194-241)||(41779202-41779249)
chr2 (187-241)||(9556461-9556515)
chr2 (189-235)||(35755347-35755393)
chr2 (200-234)||(42149759-42149793)
chr2 (187-241)||(42543371-42543425)
chr2 (187-241)||(43752039-43752093)
chr2 (187-241)||(43832234-43832288)
chr2 (187-241)||(44437813-44437867)
chr2 (188-241)||(7431981-7432034)
chr2 (200-241)||(9496015-9496056)
chr2 (174-235)||(12141667-12141728)
chr2 (195-240)||(13149476-13149521)
chr2 (208-241)||(13240855-13240888)
chr2 (191-224)||(33594382-33594415)
chr2 (202-235)||(45640623-45640656)
chr2 (190-234)||(6230363-6230407)
chr2 (205-237)||(8187261-8187293)
chr2 (187-227)||(17581595-17581635)
chr2 (201-241)||(19024328-19024368)
chr2 (187-235)||(45436978-45437026)
chr2 (174-230)||(45543175-45543231)
[»] chr1 (43 HSPs)
chr1 (187-241)||(3818948-3819002)
chr1 (174-242)||(32404617-32404685)
chr1 (186-241)||(29128918-29128973)
chr1 (187-241)||(8203226-8203280)
chr1 (187-241)||(19969304-19969358)
chr1 (172-235)||(10272379-10272442)
chr1 (187-242)||(17815615-17815670)
chr1 (194-233)||(48431506-48431545)
chr1 (191-241)||(6299485-6299535)
chr1 (187-241)||(8342973-8343027)
chr1 (187-241)||(30834069-30834123)
chr1 (187-241)||(40416507-40416561)
chr1 (172-234)||(43423840-43423902)
chr1 (200-241)||(1661568-1661609)
chr1 (174-235)||(8628153-8628214)
chr1 (200-241)||(8676957-8676998)
chr1 (172-241)||(15577539-15577608)
chr1 (188-241)||(26299222-26299275)
chr1 (188-241)||(42501245-42501298)
chr1 (169-241)||(7083008-7083080)
chr1 (187-235)||(38869018-38869066)
chr1 (174-241)||(9599486-9599553)
chr1 (187-242)||(26016573-26016628)
chr1 (172-235)||(29577240-29577303)
chr1 (187-230)||(34827207-34827250)
chr1 (172-235)||(50771654-50771717)
chr1 (172-219)||(51584865-51584912)
chr1 (174-241)||(52561681-52561748)
chr1 (187-241)||(6025741-6025795)
chr1 (187-229)||(7762541-7762583)
chr1 (191-241)||(12231505-12231555)
chr1 (187-241)||(28528491-28528545)
chr1 (172-226)||(36339910-36339964)
chr1 (187-241)||(41560365-41560419)
chr1 (174-227)||(9509441-9509494)
chr1 (187-235)||(11331302-11331350)
chr1 (187-235)||(11489323-11489371)
chr1 (172-220)||(12261826-12261874)
chr1 (189-241)||(33560950-33561002)
chr1 (209-241)||(43375690-43375722)
chr1 (189-233)||(46388514-46388558)
chr1 (189-233)||(46394958-46395002)
chr1 (201-241)||(52532708-52532748)
[»] chr8 (33 HSPs)
chr8 (187-235)||(24739946-24739994)
chr8 (187-241)||(4011219-4011273)
chr8 (187-241)||(10108949-10109003)
chr8 (187-241)||(35643698-35643752)
chr8 (169-241)||(38178352-38178424)
chr8 (189-241)||(39967591-39967643)
chr8 (187-234)||(16994543-16994590)
chr8 (174-241)||(28169515-28169582)
chr8 (189-227)||(5127376-5127414)
chr8 (187-241)||(16351514-16351568)
chr8 (187-241)||(17491746-17491800)
chr8 (187-241)||(23023361-23023415)
chr8 (191-241)||(24399881-24399931)
chr8 (187-241)||(28269771-28269824)
chr8 (187-241)||(45512587-45512641)
chr8 (172-241)||(2216409-2216477)
chr8 (172-241)||(10079999-10080068)
chr8 (191-235)||(79167-79211)
chr8 (187-235)||(9904980-9905028)
chr8 (187-235)||(24558619-24558667)
chr8 (189-241)||(29520787-29520839)
chr8 (191-251)||(13589619-13589681)
chr8 (194-241)||(30559836-30559883)
chr8 (187-241)||(39388918-39388973)
chr8 (191-241)||(7615683-7615733)
chr8 (200-242)||(14459044-14459086)
chr8 (191-241)||(30198358-30198408)
chr8 (195-241)||(36069746-36069792)
chr8 (187-224)||(5908782-5908819)
chr8 (187-240)||(38391986-38392039)
chr8 (174-227)||(45419358-45419411)
chr8 (187-235)||(9070124-9070172)
chr8 (201-241)||(30783134-30783174)
[»] scaffold0279 (1 HSPs)
scaffold0279 (192-235)||(17680-17723)
[»] scaffold0015 (1 HSPs)
scaffold0015 (187-242)||(66673-66728)
[»] scaffold0325 (1 HSPs)
scaffold0325 (190-240)||(11936-11986)
[»] scaffold1259 (1 HSPs)
scaffold1259 (187-242)||(1610-1665)
[»] scaffold0373 (1 HSPs)
scaffold0373 (200-241)||(2393-2434)


Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 30 - 251
Target Start/End: Complemental strand, 44401428 - 44401207
Alignment:
Q  30 gaaggaagaagagaactgtttaaacatgtcaattgatattgtcttgtgatgagtggcactgtggcaattgtgactattgtgttctatgctatttatggaa 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44401428 gaaggaagaagagaactgtttaaacatgtcaattgatattgtcttgtgatgagtggcactgtggcaattgtgactattgtgttctatgctatttatggaa 44401329  T
Q  130 taaatcatctttattagatgtgagaaactatttatcaggtcgctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttaga 229  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44401328 taaatcatctttattagatgtgagaaactatttatcagatcactagaggtggaggatgacctagaaaaattataagagaaactattaagaaagatttaga 44401229  T
Q  230 gattaacgagttatcaaaatat 251  Q
    ||||||||||||||||||||||    
T  44401228 gattaacgagttatcaaaatat 44401207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 28562525 - 28562458
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| | |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  28562525 agaggtagaggatgacctagaaaaaatataagagaaactattatgaaagatttagagattaacgagtt 28562458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 28628092 - 28628025
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| | ||| |||||||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  28628092 agaggtagaggaagacctagaaaaactataagagaaactattaggaaagatttagagattaatgagtt 28628025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 45601596 - 45601678
Alignment:
Q  171 gctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt--atcaaaatat 251  Q
    ||||||||| | ||| |||||||||||| |||||||||||| |||||||||||| |||||||||| |||||  ||||||||||    
T  45601596 gctagaggtagaggaagacctagaaaaactataagagaaaccattaagaaagatctagagattaatgagttggatcaaaatat 45601678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 38135359 - 38135305
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  38135359 gacctagaaaaagtataagagaaactattaaaaaagatttagagattaatgagtt 38135305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 12966152 - 12966200
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  12966152 gacctagaaaaactataagagaaactattaagaaatatttagagattaa 12966200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 36239938 - 36239888
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  36239938 tagaaaaactataagagaaactattaggaaaaatttagagattaacgagtt 36239888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 1569154 - 1569218
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt--atcaaaatat 251  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||| |||||  ||||||||||    
T  1569154 cctagaaaaactataagagtaactattaagaaagatctagagattaatgagttggatcaaaatat 1569218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 21517526 - 21517478
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  21517526 gacctagaaaaactataagagaaactattaaaaaatatttagagattaa 21517478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 29653692 - 29653637
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    |||| ||||||| | ||||||||||||||||||||||| |||||||||| ||||||    
T  29653692 gaccaagaaaaactgtaagagaaactattaagaaagatctagagattaatgagtta 29653637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 30814817 - 30814771
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagatt 233  Q
    |||||||||| | ||||||||||||||||||||||||| ||||||||    
T  30814817 gacctagaaacactataagagaaactattaagaaagatctagagatt 30814771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 37976371 - 37976425
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| |||||| ||||||| || |||||||||||||||||| |||||    
T  37976371 gacctagaaaaactataagtgaaactaatatgaaagatttagagattaatgagtt 37976425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 42187564 - 42187625
Alignment:
Q  173 tagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||| |||| ||| |||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  42187564 tagatgtggaggaagaccta-aaaaattataagagaaactattaggaaatatttagagattaa 42187625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 24549821 - 24549780
Alignment:
Q  200 tataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||||||||||||| |||||||||| |||||    
T  24549821 tataagagaaactattaagaaagatctagagattaatgagtt 24549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 14593881 - 14593929
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaa 220  Q
    |||||||| | ||| |||||||||||| |||||||||||||||||||||    
T  14593881 ctagaggtaggggaagacctagaaaaactataagagaaactattaagaa 14593929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 28858185 - 28858229
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||||    
T  28858185 tagaaaaactataagacaaactattaagaaagatctagagattaa 28858229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 42177178 - 42177110
Alignment:
Q  173 tagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||| ||| ||| |||||||  |||||||||| |||||||||||||| ||||||| || |||||    
T  42177178 tagaggtggaggaagacgtagaaaacctataagagaatctattaagaaagatctagagataaatgagtt 42177110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 47796298 - 47796250
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||| |||||||||||||||||| |||||| |||||||||||| |||||    
T  47796298 gaccgagaaaaattataagagaacctattaggaaagatttagaaattaa 47796250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 30664707 - 30664758
Alignment:
Q  190 ctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||| | ||||| ||||||||||||||||||| |||||||||| |||||    
T  30664707 ctagaaagactataaaagaaactattaagaaagatctagagattaatgagtt 30664758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 43281963 - 43282033
Alignment:
Q  183 ggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt--atcaaaatat 251  Q
    ||||||||||||||||   |||||||||| |||||| ||||| |||||||||| |||||  ||||||||||    
T  43281963 ggatgacctagaaaaaccgtaagagaaacaattaagtaagatctagagattaatgagttggatcaaaatat 43282033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 43282541 - 43282576
Alignment:
Q  183 ggatgacctagaaaaattataagagaaactattaag 218  Q
    |||||||||||||||| |||||||||||||||||||    
T  43282541 ggatgacctagaaaaactataagagaaactattaag 43282576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 16013406 - 16013452
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaa 220  Q
    |||||| | ||| |||||||||||| |||||||||||||||||||||    
T  16013406 agaggtaggggaagacctagaaaaactataagagaaactattaagaa 16013452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 30144911 - 30144965
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| ||||| |||  |||||||||||||||||||| |||||||||| |||||    
T  30144911 gacctataaaaactattcgagaaactattaagaaagatctagagattaatgagtt 30144965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 36136900 - 36136942
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttaga 229  Q
    |||||||||||| ||||||||||||||||  ||||||||||||    
T  36136900 gacctagaaaaactataagagaaactatttggaaagatttaga 36136942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 36193805 - 36193759
Alignment:
Q  195 aaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||| |||||||| ||||||| ||||||||| |||||    
T  36193805 aaaattataagagagactattaacaaagattcagagattaatgagtt 36193759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 40830338 - 40830392
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||  ||||||||||||||||||||| ||| |||| ||||| |||||    
T  40830338 gacctagaaaatctataagagaaactattaagaaggatctagaaattaatgagtt 40830392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 41483639 - 41483677
Alignment:
Q  203 aagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  41483639 aagagaaactattaagaaagatctagaaattaacgagtt 41483677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 28542069 - 28542036
Alignment:
Q  208 aaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||||||||||||| |||||    
T  28542069 aaactattaagaaagatttagagattaatgagtt 28542036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 40139079 - 40139046
Alignment:
Q  202 taagagaaactattaagaaagatttagagattaa 235  Q
    ||||||||||||||||||||||| ||||||||||    
T  40139079 taagagaaactattaagaaagatctagagattaa 40139046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 22174140 - 22174184
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||| ||||||||||||||| || |||||| ||||||||||    
T  22174140 tagaaaaactataagagaaactataaacaaagatctagagattaa 22174184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 32368480 - 32368436
Alignment:
Q  190 ctagaaaaattataagagaaactattaagaaagatttagagatta 234  Q
    ||||||||  |||||||||| |||||||| |||||||||||||||    
T  32368480 ctagaaaatctataagagaagctattaaggaagatttagagatta 32368436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 32920264 - 32920308
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||| ||| |||||||||||||| |||||||||||| ||||    
T  32920264 tagaaaaactatgagagaaactattaaaaaagatttagaggttaa 32920308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 35922407 - 35922443
Alignment:
Q  205 gagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||||||||||| |||| |||||    
T  35922407 gagaaactattaagaaagatttagaggttaatgagtt 35922443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 40980087 - 40980031
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagag 230  Q
    |||||| | ||| ||||||| |||| |||||||||||||||||  ||||||||||||    
T  40980087 agaggtagaggaagacctaggaaaactataagagaaactattagaaaagatttagag 40980031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 7e-70; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 33226542 - 33226405
Alignment:
Q  30 gaaggaagaagagaactgtttaaacatgtcaattgatattgtcttgtgatgagtggcactgtggcaattgtgactattgtgttctatgctatttatggaa 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33226542 gaaggaagaagagaactgtttaaacatgtcaattgatattgtcttgtgatgagtggcactgtggcaatagtgactattgtgttctatgctatttatggaa 33226443  T
Q  130 taaatcatctttattagatgtgagaaactatttatcag 167  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33226442 taaatcatctttattagatgtgagaaactatttatcag 33226405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 33225983 - 33225915
Alignment:
Q  183 ggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagttatcaaaatat 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33225983 ggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagttatcaaaatat 33225915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 45204998 - 45204937
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  45204998 agaggtggaggaagacctagaaaaactataagagaaactattaggaaagatttagagtttaa 45204937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 28351695 - 28351742
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagatta 234  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  28351695 gacctagaaaaactataagagaaactattacgaaagatttagagatta 28351742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 10209172 - 10209226
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||||||| ||| |||||||||| |||||    
T  10209172 gacctagaaaaactataagagaaactattaagaaggatctagagattaatgagtt 10209226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 37488227 - 37488275
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  37488227 gacctagaaaaactataagagaaactattaagaaagatctagaaattaa 37488275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 35690394 - 35690461
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| | ||| |||||||||||| ||||||||||||||||| |||| |||||||| |||| |||||    
T  35690394 agaggtagaggaagacctagaaaaactataagagaaactattacgaaaaatttagaggttaatgagtt 35690461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 42293415 - 42293356
Alignment:
Q  183 ggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    |||||| ||| ||||| ||||||||||||||||||||||||| |||| ||||| ||||||    
T  42293415 ggatgaactaaaaaaactataagagaaactattaagaaagatctagaaattaatgagtta 42293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 31961412 - 31961358
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||| || |||||    
T  31961412 gacctagaaaaactataagagaaactattaggaaagatctagagataaatgagtt 31961358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 45569155 - 45569101
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||| |||||||||||||||||||||||| || ||||||| || |||||    
T  45569155 gacctagaaacattataagagaaactattaagaaaaatctagagatcaatgagtt 45569101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 47147509 - 47147563
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||  ||||||||||||||||||| |||||||||| |||||    
T  47147509 gacctagaaaaactatagaagaaactattaagaaagatctagagattaatgagtt 47147563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 50680876 - 50680930
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||| |||| |||||||| |||||||||| |||||    
T  50680876 gacctagaaaaactataagagaaattatttagaaagatctagagattaatgagtt 50680930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 55809136 - 55809082
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||| |||| |||||    
T  55809136 gacctagaaaaactataagagaaactgttaggaaagatttagaggttaatgagtt 55809082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 8599087 - 8599050
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagat 224  Q
    |||||||||||| |||||||||||||||||||||||||    
T  8599087 gacctagaaaaactataagagaaactattaagaaagat 8599050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 26356740 - 26356809
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||| | ||| |||||||||||| ||||||||||||| ||| ||| ||| |||||||||| |||||    
T  26356740 ctagaggtaggggaagacctagaaaaactataagagaaactgttatgaaggatctagagattaatgagtt 26356809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 49987544 - 49987589
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagat 232  Q
    |||||||||||| |||||||||||||||||||||||| || |||||    
T  49987544 gacctagaaaaactataagagaaactattaagaaagacttggagat 49987589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 21107128 - 21107176
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| ||||||||||||||||| ||||| ||||| ||||||    
T  21107128 gacctagaaaaactataagagaaactattaggaaagttttagtgattaa 21107176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 28550591 - 28550547
Alignment:
Q  197 aattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||||| ||||||||||||| |||| |||||    
T  28550591 aattataagagaaactattaggaaagatttagaggttaatgagtt 28550547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 50662526 - 50662578
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||||||| |||| | |||||| |||||||||| |||||    
T  50662526 cctagaaaaattataagagaaattatttaaaaagatctagagattaatgagtt 50662578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 51421870 - 51421914
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||| ||||||||||||||||| ||||||||||||| ||||    
T  51421870 tagaaaaactataagagaaactattaggaaagatttagaggttaa 51421914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 934574 - 934523
Alignment:
Q  190 ctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||| ||| ||||||||||||||||||| | |||||||||| |||||    
T  934574 ctagaaaaactattagagaaactattaagaaagttctagagattaatgagtt 934523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 7544654 - 7544615
Alignment:
Q  202 taagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  7544654 taagagaaactattaagaaagatctagagattaatgagtt 7544615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 13805410 - 13805367
Alignment:
Q  188 acctagaaaaattataagagaaactattaagaaagatttagaga 231  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  13805410 acctagaaaaactataagagaaactatgaagaaagattttgaga 13805367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 17666185 - 17666134
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    |||||||| |||||||||||||||||  ||||||||| ||||||| ||||||    
T  17666185 tagaaaaaatataagagaaactattagaaaagatttatagattaatgagtta 17666134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 235
Target Start/End: Complemental strand, 30621330 - 30621299
Alignment:
Q  204 agagaaactattaagaaagatttagagattaa 235  Q
    ||||||||||||||||||||||||||||||||    
T  30621330 agagaaactattaagaaagatttagagattaa 30621299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 20999136 - 20999190
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||| | ||||||||||||||||| ||||| |||| |||||    
T  20999136 gacctagaaaaactataatataaactattaagaaagatctagagtttaatgagtt 20999190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 25967394 - 25967356
Alignment:
Q  200 tataagagaaactattaagaaagatttagagattaacga 238  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  25967394 tataagagaaactattaaaaaagatctagagattaacga 25967356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 26024988 - 26024942
Alignment:
Q  195 aaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||| |||| |||||||||||||||||||| |||||||||| |||||    
T  26024988 aaaactatatgagaaactattaagaaagatctagagattaatgagtt 26024942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 31043224 - 31043262
Alignment:
Q  203 aagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  31043224 aagagaaactattaggaaagatttagagattaatgagtt 31043262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 31897574 - 31897520
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||| ||| ||| ||||||| || |||||    
T  31897574 gacctagaaaaactataagagaaactattaggaaggatctagagataaatgagtt 31897520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 37042797 - 37042763
Alignment:
Q  200 tataagagaaactattaagaaagatttagagatta 234  Q
    ||||||||||||||||||||||||| |||||||||    
T  37042797 tataagagaaactattaagaaagatctagagatta 37042763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 40654268 - 40654218
Alignment:
Q  192 agaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    ||||||||||||| ||||||||| ||||||||| || ||||||| ||||||    
T  40654268 agaaaaattataaaagaaactatcaagaaagatgtaaagattaatgagtta 40654218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 46372160 - 46372214
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||| ||| ||| ||||||| || |||||    
T  46372160 gacctagaaaaactataagagaaactattaggaaggatctagagataaatgagtt 46372214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 53540426 - 53540480
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||| ||||||||| |||||| || |||||||| |||||    
T  53540426 gacctagaaaaactataagataaactattaggaaagacttggagattaatgagtt 53540480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 6843764 - 6843805
Alignment:
Q  200 tataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||| ||||||||||||||| |||||||||| |||||    
T  6843764 tataagagagactattaagaaagatctagagattaatgagtt 6843805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 30480266 - 30480299
Alignment:
Q  201 ataagagaaactattaagaaagatttagagatta 234  Q
    |||||||||| |||||||||||||||||||||||    
T  30480266 ataagagaaaatattaagaaagatttagagatta 30480299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 44719510 - 44719473
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagat 224  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  44719510 gacctagaaaaaatataaaagaaactattaagaaagat 44719473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 2557832 - 2557764
Alignment:
Q  173 tagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||| | ||| || ||||||||| | ||||||||||||||||||| ||| |  |||||||||||||    
T  2557832 tagaggtagaggaagatctagaaaaactgtaagagaaactattaagaaggatctgaagattaacgagtt 2557764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 26025047 - 26025011
Alignment:
Q  205 gagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||||| |||||||||| |||||    
T  26025047 gagaaactattaagaaagatctagagattaatgagtt 26025011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 35555793 - 35555761
Alignment:
Q  187 gacctagaaaaattataagagaaactattaaga 219  Q
    |||||||||||| ||||||||||||||||||||    
T  35555793 gacctagaaaaactataagagaaactattaaga 35555761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 50471647 - 50471699
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagat 224  Q
    ||||||||||||||  ||||||||| | ||||||||||||||  |||||||||    
T  50471647 ctagaggtggtggaaaacctagaaagactataagagaaactaccaagaaagat 50471699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 9593867 - 9593800
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| | ||| |||||||||||||||||||||||||||||| |||||| ||||||||||| |||||    
T  9593867 agaggtagaggaagacctagaaaaattataagagaaactattaggaaagacttagagattaatgagtt 9593800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 8364692 - 8364740
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||    
T  8364692 gacctaaaaaaactataagagaaactattaagaaagatttagaaattaa 8364740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 35199764 - 35199713
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||    
T  35199764 tagaaaaattataaaagaaactattaggaaagatctagagattaatgagtta 35199713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 34651 - 34597
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| |||||||||||| |||||||||||| || ||||||| |||||    
T  34651 gacctagaaaaactataagagaaaccattaagaaagatctaaagattaatgagtt 34597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 1681667 - 1681613
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| |||| |||||||||||||||||||||| ||| |||||||||| |||||    
T  1681667 gacctaaaaaagttataagagaaactattaagaaggatctagagattaatgagtt 1681613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 31818667 - 31818721
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||| ||||| ||| |||||||| |||||    
T  31818667 gacctagaaaaactataagagaaactattaggaaaggtttggagattaatgagtt 31818721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 10617379 - 10617326
Alignment:
Q  188 acctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||| |||||||||||| |||||||| ||| |||||||||| |||||    
T  10617379 acctagaaaaactataagagaaaccattaagaaggatctagagattaatgagtt 10617326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 31832003 - 31831958
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagatttagagatta 234  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||    
T  31832003 cctagaaaaactatcagagaaactattaagaaagatctagagatta 31831958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 2689770 - 2689813
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagag 230  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||    
T  2689770 gacctagaaaaactataagagaaaccattaaaaaagatttagag 2689813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 6055917 - 6055862
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    |||||| ||||| | ||||||||||||||| ||||||||||||| |||| ||||||    
T  6055917 gacctataaaaactttaagagaaactattatgaaagatttagaggttaatgagtta 6055862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 4797066 - 4797116
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||  |||||| ||||||||| |||||||||||| |||||||||||    
T  4797066 tagaaaaacgataagataaactattatgaaagatttagaaattaacgagtt 4797116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 38900 - 38953
Alignment:
Q  188 acctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||| ||||||||||||||||| ||| ||| ||||||| || |||||    
T  38900 acctagaaaaactataagagaaactattaggaaggatctagagataaatgagtt 38953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 5095957 - 5096036
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt--atcaaaatat 251  Q
    |||||| | ||| |||||||||||| || |||||||||| ||| ||||||||||| | |||| |||||  ||||||||||    
T  5095957 agaggtagaggaagacctagaaaaactagaagagaaactcttaggaaagatttagtggttaatgagttggatcaaaatat 5096036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 29922423 - 29922474
Alignment:
Q  190 ctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  29922423 ctagaaaaactataagagaaactattaagaaagatttagagattaacaagtt 29922474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 6889131 - 6889177
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||    
T  6889131 cctagaaaaactataagagaaactattaggaaagatttagagattaa 6889177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 14749443 - 14749497
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||    
T  14749443 gacctagaaaaactataagagaaactatcaagaaggatctagagattaacgagtt 14749497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 28005 - 28066
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||| | ||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  28005 agaggttgaggaagacctagaaaaactataagagaaactattaggaaagatttagaggttaa 28066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 32759713 - 32759766
Alignment:
Q  188 acctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||    
T  32759713 acctagaaaaattataaaagaaactattaagaaagatttatagaataatgagtt 32759766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 6859517 - 6859564
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagatta 234  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  6859517 gacctagaaaaactataagagaaactattaggaaagatttacagatta 6859564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 27998577 - 27998632
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    |||||||||||| |||||||||||||| |||||||||| || ||||||| ||||||    
T  27998577 gacctagaaaaactataagagaaactactaagaaagatctacagattaatgagtta 27998632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 28186906 - 28186867
Alignment:
Q  202 taagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  28186906 taagagaaactattaagaaagatttagagattaatgagtt 28186867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 2066133 - 2066187
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||| |||||||| ||| |||||| |||||||||| |||||    
T  2066133 gacctagaaaaattataaaagaaactactaaaaaagatctagagattaatgagtt 2066187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 2713080 - 2713134
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||||| || |||||    
T  2713080 gacctagaaaaactataagagaaactattaagaaggatctagagatgaatgagtt 2713134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 9917600 - 9917542
Alignment:
Q  183 ggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||| ||| |||||||||||| |||||||| ||||||| || |||||    
T  9917600 ggatgacctagaaaaactattagagaaactatttagaaagatatagagatcaatgagtt 9917542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 12577006 - 12576952
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| || |||| ||||||||||||||||| |||||||||| |||||    
T  12577006 gacctagaaaaactacaagataaactattaagaaagatctagagattaatgagtt 12576952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 15489638 - 15489590
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    ||||||||||||  ||||||||||||||||||||||| ||| |||||||    
T  15489638 gacctagaaaaacaataagagaaactattaagaaagacttatagattaa 15489590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 38684616 - 38684664
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| || |||||||||| ||||||||||| ||||||||||    
T  38684616 gacctagaaaaactacaagagaaacttttaagaaagatctagagattaa 38684664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 11675672 - 11675719
Alignment:
Q  194 aaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||| ||||||||||||||||| || ||||||||||||||| |||||    
T  11675672 aaaaactataagagaaactattaggacagatttagagattaatgagtt 11675719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 11753137 - 11753188
Alignment:
Q  184 gatgacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||| |||||||| |||||||||||||||||||||| || || |||||||    
T  11753137 gatgacatagaaaaactataagagaaactattaagaaatatataaagattaa 11753188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 28676731 - 28676786
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    |||||| ||||| |||||||||||| |||| |||||| ||||| ||||||||||||    
T  28676731 gacctataaaaactataagagaaacaattatgaaagaattagatattaacgagtta 28676786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 10082891 - 10082837
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| |||||||||||||| ||| || ||| |||||||||| |||||    
T  10082891 gacctagaaaaactataagagaaactagtaacaaggatctagagattaatgagtt 10082837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 221
Target Start/End: Complemental strand, 15369943 - 15369909
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaa 221  Q
    |||||||||||| ||||||||||||||||||||||    
T  15369943 gacctagaaaaagtataagagaaactattaagaaa 15369909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 17340578 - 17340528
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||  | |||||||||||||||||||||| |||| |||||    
T  17340578 tagaaaaattataattgtaactattaagaaagatttagaggttaatgagtt 17340528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 30588583 - 30588637
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||| | ||||||||||| ||||||| || |||||    
T  30588583 gacctagaaaaactataagagaaattgttaagaaagatctagagatgaatgagtt 30588637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 33667571 - 33667625
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||  ||||||||| ||| |||||||||| |||||    
T  33667571 gacctagaaaaactataagagaagttattaagaaggatctagagattaatgagtt 33667625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 9235198 - 9235231
Alignment:
Q  202 taagagaaactattaagaaagatttagagattaa 235  Q
    ||||||||||||||||||||||| ||||||||||    
T  9235198 taagagaaactattaagaaagatatagagattaa 9235231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 5303582 - 5303634
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||| | |||||||||||||| | |||||||||||| |||| |||||    
T  5303582 cctagaaaaactgtaagagaaactattgaaaaagatttagagtttaatgagtt 5303634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 7678628 - 7678668
Alignment:
Q  201 ataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||| |||||||| |||||||||| |||||    
T  7678628 ataagagaaactatttagaaagatctagagattaatgagtt 7678668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 14725657 - 14725720
Alignment:
Q  190 ctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt--atcaaaatat 251  Q
    ||||||||||||||||| |||||||||  ||||||||| || |||| |||||  ||||||||||    
T  14725657 ctagaaaaattataagataaactattataaaagatttaaaggttaatgagttggatcaaaatat 14725720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 39600840 - 39600773
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  39600840 agaggtagaggaagacctagaaaaactataagagaaactattaagaaagatttagaggttaatgagtt 39600773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 36820122 - 36820069
Alignment:
Q  188 acctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  36820122 acctagaaaaactataagagaaactattaagaaagatctagagattaatgagtt 36820069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 40116614 - 40116560
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||| || ||||||||||||||| |||||    
T  40116614 gacctagaaaaactataagagaaactattaggatagatttagagattaatgagtt 40116560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 2340863 - 2340810
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagt 240  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||    
T  2340863 gacctaggaaaactataagagaaactattaagaaagatctagagattaatgagt 2340810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 46431822 - 46431771
Alignment:
Q  190 ctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||| |||||    
T  46431822 ctagaaaaactataagagaaactattaaaaaagatctagagattaatgagtt 46431771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 11581580 - 11581634
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||||||||||| || |||| || |||||    
T  11581580 gacctagaaaaactataagagaaactattaagaaagatctatagataaatgagtt 11581634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 19162733 - 19162679
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||| |||  ||||||||||||||||| |||||||||||||||||| |||||    
T  19162733 gacctaggaaatctataagagaaactattaggaaagatttagagattaatgagtt 19162679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 45289229 - 45289183
Alignment:
Q  195 aaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||    
T  45289229 aaaactataagagaaactattaggaaagatttagagattaatgagtt 45289183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 50960783 - 50960729
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| | ||||||||||||||| ||||| |||||||||||| |||||    
T  50960783 gacctagaaaaaatttaagagaaactattaggaaaggtttagagattaatgagtt 50960729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 21427728 - 21427683
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagat 232  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||    
T  21427728 gaccaagaaaaattataagagaaactattaagaaagacctagagat 21427683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 23534731 - 23534662
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||| | ||| |||| | ||||||||||| ||||||||||| |||||| ||||||||||| |||||    
T  23534731 ctagaggtagaggaagacccaaaaaaattataacagaaactattaggaaagacttagagattaatgagtt 23534662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 33755487 - 33755434
Alignment:
Q  188 acctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||| ||||||||||||||||| |||| | ||||||||||| |||||    
T  33755487 acctagaaaaactataagagaaactattaggaaaaacttagagattaatgagtt 33755434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 40982032 - 40982080
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| |||||||| |||||||||||||||| |||| |||||    
T  40982032 gacctagaaaaactataagagtaactattaagaaagatctagatattaa 40982080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 43308698 - 43308746
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| || ||||||||||||||||||| || ||||||||||    
T  43308698 gacctagaaaaactacaagagaaactattaagaaaaatctagagattaa 43308746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 45486998 - 45486950
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| ||||||||||||||||| |||||| || ||||||||    
T  45486998 gacctagaaaaactataagagaaactattatgaaagactttgagattaa 45486950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 54365121 - 54365073
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| ||||||||||||||||| |||||| || ||||||||    
T  54365121 gacctagaaaaactataagagaaactattaggaaagacttggagattaa 54365073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 31261088 - 31261049
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagattt 226  Q
    |||||||||||| ||||||||||||||| |||||||||||    
T  31261088 gacctagaaaaactataagagaaactatcaagaaagattt 31261049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 37351528 - 37351591
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||| | ||| |||||||||||| ||| |||||||| || ||||||||| ||||||||||    
T  37351528 ctagaggtaggggaagacctagaaaaactattagagaaacaatcaagaaagatctagagattaa 37351591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 19676227 - 19676173
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| | ||||||||||||||| |||| |||||||| |||| |||||    
T  19676227 gacctagaaaaactgtaagagaaactattaggaaaaatttagaggttaatgagtt 19676173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 37228218 - 37228272
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| |||||  ||||| ||||||||||||||||| ||||| |||||||||||    
T  37228218 gacctataaaaacgataagggaaactattaagaaagacttagaaattaacgagtt 37228272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 41087880 - 41087934
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||| |||||| ||||| ||||| ||||||||| |||||||||||||| |||||    
T  41087880 gacctggaaaaactataaaagaaattattaagaaggatttagagattaatgagtt 41087934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 41452882 - 41452832
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||| ||||||  ||||||||||||||||| |||||||||| |||||    
T  41452882 tagaaaaactataagttaaactattaagaaagatctagagattaatgagtt 41452832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 37598318 - 37598262
Alignment:
Q  184 gatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||| | |||||||||||||||||| | || |||||||||| |||||    
T  37598318 gatgacctagaaaaact-taagagaaactattaagatatatctagagattaatgagtt 37598262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 44133983 - 44133942
Alignment:
Q  194 aaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||||||||||||||||| |||| || |||||||    
T  44133983 aaaaattataagagaaactattaagatagatctaaagattaa 44133942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 49042085 - 49042126
Alignment:
Q  200 tataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||||| ||||||||||||| |||| |||||    
T  49042085 tataagagaaactattaggaaagatttagaggttaatgagtt 49042126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 54920827 - 54920786
Alignment:
Q  194 aaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||| ||||||||||||  |||||||||||||||||    
T  54920827 aaaaattatacgagaaactattagaaaagatttagagattaa 54920786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 7278596 - 7278640
Alignment:
Q  188 acctagaaaaattataagagaaactattaagaaagatttagagat 232  Q
    ||||||||||| ||||||||||||| ||| ||||||| |||||||    
T  7278596 acctagaaaaactataagagaaactgttacgaaagatctagagat 7278640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 34844719 - 34844671
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| ||||||||||||||||| |||| | || ||||||||    
T  34844719 gacctagaaaaactataagagaaactattaggaaaaacttggagattaa 34844671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 44443348 - 44443304
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagatttagagatt 233  Q
    |||||||||| ||||||||||||| ||||||| ||| ||||||||    
T  44443348 cctagaaaaactataagagaaacttttaagaatgatctagagatt 44443304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 46367540 - 46367504
Alignment:
Q  181 gtggatgacctagaaaaattataagagaaactattaa 217  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  46367540 gtggaagacctaaaaaaattataagagaaactattaa 46367504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 47804791 - 47804755
Alignment:
Q  205 gagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  47804791 gagaaacgattaagaaagatttagagattaatgagtt 47804755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 178566 - 178512
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  178566 gacctagaaaaactataagagaaactattaagaaagatatagagattaatgagtt 178512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 26784486 - 26784432
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  26784486 gacctagaaaaactataagagaaactattaagaaagatatagagattaatgagtt 26784432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 26670889 - 26670958
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||| | ||| |||||| ||||| ||||| |||||||||||||||||||||||||||||| |||||    
T  26670889 ctagaggtagaggaagacctacaaaaactataaaagaaactattaagaaagatttagagattaatgagtt 26670958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 33287557 - 33287612
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    |||||||||||| ||||||||||||||||||||||||| |||| ||||| ||||||    
T  33287557 gacctagaaaaactataagagaaactattaagaaagatctagaaattaatgagtta 33287612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 37452372 - 37452318
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||| |||||    
T  37452372 gacctagaaaaattataagaggagctattaagaaagaattagagattaatgagtt 37452318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 33504360 - 33504405
Alignment:
Q  188 acctagaaaaattataagagaaactattaagaaagatttagagatt 233  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  33504360 acctagaaaaactataagagaaactattaagaaagatctagagatt 33504405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 4481607 - 4481651
Alignment:
Q  170 cgctagaggtggtggatgacctagaaaaattataagagaaactat 214  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||    
T  4481607 cgctagaggtggaggaagacctagaaaaattataagagaaactat 4481651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 18188892 - 18188936
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||    
T  18188892 tagaaaaattataagagaaactattcagaaagatctagagattaa 18188936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 19235130 - 19235082
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| |||||||||||||||| |||||||| ||||||||||    
T  19235130 gacctagaaaaactataagagaaactattgagaaagatctagagattaa 19235082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 38435088 - 38435136
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| || |||||||||||||||||||||| ||||||||||    
T  38435088 gacctagaaaaactacaagagaaactattaagaaagatctagagattaa 38435136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 8491266 - 8491304
Alignment:
Q  198 attataagagaaactattaagaaagatttagagattaac 236  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  8491266 attataagagaaactattaagaaagatttagaggttaac 8491304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 12026151 - 12026097
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||| ||| |||| |||||||||||||||||||| |||||||||| |||||    
T  12026151 gacctagagaaactataggagaaactattaagaaagatctagagattaatgagtt 12026097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 1626344 - 1626385
Alignment:
Q  200 tataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||||||||||||| |||||||||| |||||    
T  1626344 tataagagaaactattaagaaagatctagagattaatgagtt 1626385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 29548776 - 29548735
Alignment:
Q  194 aaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  29548776 aaaaactataagagaaattattaagaaagatttagagattaa 29548735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 38860320 - 38860360
Alignment:
Q  193 gaaaaattataagagaaactattaagaaagatttagagatt 233  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  38860320 gaaaaatgataagagaaactattaagaaagatctagagatt 38860360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 42092653 - 42092701
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| |||| ||||||||||||| |||||| ||||||||||    
T  42092653 gacctagaaaaactataggagaaactattaaaaaagatgtagagattaa 42092701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 36869997 - 36870040
Alignment:
Q  190 ctagaaaaattataagagaaactattaagaaagatttagagatt 233  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||    
T  36869997 ctagaaaaactataagagaaactaataagaaggatttagagatt 36870040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 41779249 - 41779202
Alignment:
Q  194 aaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||||| |||||| |||||| |||||||||| |||||    
T  41779249 aaaaattataagagaaattattaaaaaagatctagagattaatgagtt 41779202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 9556515 - 9556461
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||| |||||| ||||||| ||||||||||||||||| ||| |||||| |||||    
T  9556515 gaccttgaaaaactataagataaactattaagaaagatctagtgattaatgagtt 9556461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 35755393 - 35755347
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||| ||||| ||||||||||| ||||||||||||| ||||    
T  35755393 cctagaaaaactataacagaaactattaggaaagatttagaggttaa 35755347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 42149793 - 42149759
Alignment:
Q  200 tataagagaaactattaagaaagatttagagatta 234  Q
    ||||||||||||||||||||||||| |||||||||    
T  42149793 tataagagaaactattaagaaagatctagagatta 42149759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 42543371 - 42543425
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||| ||| ||| ||||||| || |||||    
T  42543371 gacctagaaaaactataagagaaactattaggaaggatctagagataaatgagtt 42543425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 43752093 - 43752039
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||| ||||||||||||| ||||||||| || ||||| |||||    
T  43752093 gacctagaaaaactatcagagaaactattaggaaagatttggaaattaatgagtt 43752039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 43832234 - 43832288
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| | ||| ||||||||||||||||||||| ||| |||||||||| |||||    
T  43832234 gacctaaacaaactataagagaaactattaagaaggatctagagattaatgagtt 43832288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 44437867 - 44437813
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| |||| |||||||||||||||| ||| ||||||| || |||||    
T  44437867 gacctagaaaaactatatgagaaactattaagaaggatctagagataaatgagtt 44437813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 7432034 - 7431981
Alignment:
Q  188 acctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||| |||  |||||||||||||||| ||| |||||||||| |||||    
T  7432034 acctagaaaaactattggagaaactattaagaaggatctagagattaatgagtt 7431981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 9496015 - 9496056
Alignment:
Q  200 tataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||| |||||||||||||| |||| |||||    
T  9496015 tataagagaaactattcagaaagatttagaggttaatgagtt 9496056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 12141667 - 12141728
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||| | ||| |||||||||||  |||| |||||||||||| |||||| |||||||||||    
T  12141667 agaggtagaggaagacctagaaaagctataggagaaactattaggaaagacttagagattaa 12141728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 13149476 - 13149521
Alignment:
Q  195 aaaattataagagaaactattaagaaagatttagagattaacgagt 240  Q
    |||| ||||||||||||||||| ||||||||||||| |||| ||||    
T  13149476 aaaactataagagaaactattatgaaagatttagaggttaatgagt 13149521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 13240888 - 13240855
Alignment:
Q  208 aaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||||| ||||||||||||||||    
T  13240888 aaactattaagaaagatctagagattaacgagtt 13240855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 33594415 - 33594382
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagat 224  Q
    |||||||||||||||||||||||||| |||||||    
T  33594415 tagaaaaattataagagaaactattatgaaagat 33594382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 45640656 - 45640623
Alignment:
Q  202 taagagaaactattaagaaagatttagagattaa 235  Q
    ||||||||||||||||||||||| ||||||||||    
T  45640656 taagagaaactattaagaaagatctagagattaa 45640623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 6230407 - 6230363
Alignment:
Q  190 ctagaaaaattataagagaaactattaagaaagatttagagatta 234  Q
    ||||||||| ||| |||||||||||||||||| || |||||||||    
T  6230407 ctagaaaaaatattagagaaactattaagaaaaatctagagatta 6230363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 8187261 - 8187293
Alignment:
Q  205 gagaaactattaagaaagatttagagattaacg 237  Q
    |||||||||||||||| ||||||||||||||||    
T  8187261 gagaaactattaagaatgatttagagattaacg 8187293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 17581595 - 17581635
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagattta 227  Q
    |||||||||||| ||||||||| ||||||| ||||||||||    
T  17581595 gacctagaaaaactataagagagactattacgaaagattta 17581635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 19024328 - 19024368
Alignment:
Q  201 ataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||||||||| || ||||||| |||||    
T  19024328 ataagagaaactattaagaaagatctaaagattaatgagtt 19024368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 45436978 - 45437026
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||| |||||||||||||||| |||  | ||||||||||||||||||    
T  45436978 gacctataaaaattataagagaatctagcaggaaagatttagagattaa 45437026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 45543231 - 45543175
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagag 230  Q
    |||||| | ||| ||||| |||||| |||||||||||||||||  ||||||||||||    
T  45543231 agaggtagaggaagacctggaaaaactataagagaaactattagaaaagatttagag 45543175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 3819002 - 3818948
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  3819002 gaccttgaaaaactataagagaaactattaagaaagatttagagattaatgagtt 3818948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 32404685 - 32404617
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    |||||| | ||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||    
T  32404685 agaggtagaggaagacctacaaaaactataagagaaactattaggaaagatttagagattaatgagtta 32404617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 29128918 - 29128973
Alignment:
Q  186 tgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||| ||||| ||||    
T  29128918 tgacctagaaaaactataagagaaactattaggaaagatttagaggttaacaagtt 29128973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 8203280 - 8203226
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||||| |||||    
T  8203280 gacctagaaaaactataagagaaactattaaaaaagatctagagattaatgagtt 8203226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 19969358 - 19969304
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||||| |||||    
T  19969358 gacctagaaaaactataagagaaactattaacaaagatctagagattaatgagtt 19969304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 10272379 - 10272442
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||| | ||| ||||||||||| |||||||||||||||||||||| ||| |||| |||||    
T  10272379 ctagaggtaggggaagacctagaaaacttataagagaaactattaagaaggatctagaaattaa 10272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 17815615 - 17815670
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    ||||||||||||||||||||||||||||| |||||||| ||| |||| | ||||||    
T  17815615 gacctagaaaaattataagagaaactatttagaaagatctagtgattgatgagtta 17815670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 48431545 - 48431506
Alignment:
Q  194 aaaaattataagagaaactattaagaaagatttagagatt 233  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  48431545 aaaaactataagagaaactattaagaaagatttagagatt 48431506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 6299535 - 6299485
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||||| | ||||||||||| |||||||||| |||||    
T  6299535 tagaaaaattataagagaaattgttaagaaagatctagagattaatgagtt 6299485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 8343027 - 8342973
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| |||||||||||| ||||| |||||| |||||||||| |||||    
T  8343027 gacctagaaaaactataagagaaacaattaataaagatctagagattaatgagtt 8342973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 30834123 - 30834069
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||  ||||||||||||||||| ||||||| |||||||||| |||||    
T  30834123 gacctagaaaagctataagagaaactattacgaaagatctagagattaatgagtt 30834069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 40416507 - 40416561
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||| ||||||||||||||||| || ||||||| |||||    
T  40416507 gacctagaaaaactataagacaaactattaagaaagatctatagattaatgagtt 40416561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 43423840 - 43423902
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagatta 234  Q
    |||||||| | ||| ||||||||||||||| |||||| || |||||||||||| |||||||||    
T  43423840 ctagaggtagaggaagacctagaaaaattacaagagagaccattaagaaagatctagagatta 43423902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 1661568 - 1661609
Alignment:
Q  200 tataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||||| |||||||||||| |||||||||||    
T  1661568 tataagagaaactattaggaaagatttagaaattaacgagtt 1661609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 8628153 - 8628214
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||| | ||| |||||||||||| ||||| ||||||||||| ||||||||||||| ||||    
T  8628153 agaggtagaggaagacctagaaaaactataacagaaactattaggaaagatttagaggttaa 8628214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 8676998 - 8676957
Alignment:
Q  200 tataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  8676998 tataagagaaactattaaaaaagatttagagattaatgagtt 8676957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 15577539 - 15577608
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||| | ||| || ||| |||||| |||||||||||||||||||| ||| |||||||||| |||||    
T  15577539 ctagaggtagaggaagatctaaaaaaataataagagaaactattaagaaggatatagagattaatgagtt 15577608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 26299222 - 26299275
Alignment:
Q  188 acctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| |||| ||||||||||||||||| ||||||||||||| |||| |||||    
T  26299222 acctaggaaaactataagagaaactattatgaaagatttagaggttaatgagtt 26299275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 42501245 - 42501298
Alignment:
Q  188 acctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||| ||||||||||| ||||||||||||| || ||||||| |||||    
T  42501245 acctagaaaaactataagagaaattattaagaaagatctatagattaatgagtt 42501298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 7083008 - 7083080
Alignment:
Q  169 tcgctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||| | ||| |||||||||||  ||||||||||||||||||||  ||  |||||||||| |||||    
T  7083008 tcgctagaggtaggggaagacctagaaaagctataagagaaactattaagatggaactagagattaatgagtt 7083080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 38869018 - 38869066
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| ||||||||||| ||||||||||||| ||| ||||||    
T  38869018 gacctagaaaaactataagagaaattattaagaaagatctagcgattaa 38869066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 9599553 - 9599486
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| | ||| |||||||||||| || |||||||||||||| |||| |||||||| |||| |||||    
T  9599553 agaggtagaggaagacctagaaaaactacaagagaaactattaggaaatatttagagtttaatgagtt 9599486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 26016573 - 26016628
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    |||||||||||| ||||||||||||||||| ||| ||| ||||||| || ||||||    
T  26016573 gacctagaaaaactataagagaaactattaggaatgatctagagataaatgagtta 26016628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 29577303 - 29577240
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||| | ||| |||||||||||| || || | ||||||||||||||||| ||||||||||    
T  29577303 ctagaggtagaggaagacctagaaaaactacaacataaactattaagaaagatctagagattaa 29577240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 34827250 - 34827207
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagag 230  Q
    |||||||||||| |||||||||||||||||  ||||||||||||    
T  34827250 gacctagaaaaactataagagaaactattagaaaagatttagag 34827207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 50771717 - 50771654
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||| | ||| |||||||||||| |||||| |||||||||||||| ||  ||||||||||    
T  50771717 ctagaggtaggggaagacctagaaaaactataagcgaaactattaagaaggacctagagattaa 50771654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 51584865 - 51584912
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaaga 219  Q
    |||||||| | ||| |||||||||||| ||||||||||||||||||||    
T  51584865 ctagaggtaggggaagacctagaaaaactataagagaaactattaaga 51584912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 52561748 - 52561681
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| | ||| ||| |||||||| ||||||||||||| ||| ||||||||||||| |||| |||||    
T  52561748 agaggtagaggaagacttagaaaaactataagagaaactgttaggaaagatttagaggttaatgagtt 52561681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 6025741 - 6025795
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||| |||| ||| |||||| |||||||||| |||||    
T  6025741 gacctagaaaaactataagagatactagtaaaaaagatctagagattaatgagtt 6025795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 7762583 - 7762541
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttaga 229  Q
    |||||||||||| |||||||||||||||||  |||||||||||    
T  7762583 gacctagaaaaactataagagaaactattagaaaagatttaga 7762541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 12231505 - 12231555
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||| ||||||||| ||||||||||||||| | |||||||| |||||    
T  12231505 tagaaaaactataagagagactattaagaaagatctcgagattaatgagtt 12231555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 28528491 - 28528545
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| ||||| ||||| ||||||||||||||| ||| |||||||||| |||||    
T  28528491 gacctaaaaaaactataacagaaactattaagaaggatctagagattaatgagtt 28528545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 36339964 - 36339910
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagattt 226  Q
    |||||||| | ||| |||||||||||| ||| ||||||||||||| |||||||||    
T  36339964 ctagaggtagaggaagacctagaaaaactatcagagaaactattaggaaagattt 36339910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 41560365 - 41560419
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||  ||||||||||||||||| || | ||||||||||||| |||||    
T  41560365 gacctagaaaagctataagagaaactattaggatacatttagagattaatgagtt 41560419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 9509441 - 9509494
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagattta 227  Q
    |||||| | ||| |||||||||||| ||||||| ||||||||| ||||||||||    
T  9509441 agaggtagaggaagacctagaaaaactataagataaactattaggaaagattta 9509494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 11331350 - 11331302
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| ||||||||||||||||   |||||||||||| ||||    
T  11331350 gacctagaaaaagtataagagaaactatttgaaaagatttagaggttaa 11331302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 11489371 - 11489323
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| ||||||||||||||||   |||||||||||| ||||    
T  11489371 gacctagaaaaagtataagagaaactatttgaaaagatttagaggttaa 11489323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 12261874 - 12261826
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaa 220  Q
    |||||||||| | | |||||||||||| |||||||||||||| ||||||    
T  12261874 ctagaggtggggtaagacctagaaaaactataagagaaactagtaagaa 12261826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 33561002 - 33560950
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||| | |||| |||||||||||| ||||| ||||||||| ||||||    
T  33561002 cctagaaaaactgtaagggaaactattaagtaagatctagagattagcgagtt 33560950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 43375722 - 43375690
Alignment:
Q  209 aactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||||||||||||||| |||||    
T  43375722 aactattaagaaagatttagagattaatgagtt 43375690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 46388514 - 46388558
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagatttagagatt 233  Q
    |||||||||| ||||||||||||| ||||||| ||| ||||||||    
T  46388514 cctagaaaaactataagagaaacttttaagaatgatctagagatt 46388558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 46394958 - 46395002
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagatttagagatt 233  Q
    |||||||||| ||||||||||||| ||||||| ||| ||||||||    
T  46394958 cctagaaaaactataagagaaacttttaagaatgatctagagatt 46395002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 52532748 - 52532708
Alignment:
Q  201 ataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||| |||||||||||| ||||| |||||    
T  52532748 ataagagaaactattaggaaagatttagaaattaatgagtt 52532708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 24739994 - 24739946
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  24739994 gacctagaaaaattataagagaaactattgagaaagatgtagagattaa 24739946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 4011219 - 4011273
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||||||||||| || ||||||| |||||    
T  4011219 gacctagaaaaactataagagaaactattaagaaagatctaaagattaatgagtt 4011273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 10108949 - 10109003
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||  ||||||||||||| |||||||||| ||||||||||||||||    
T  10108949 gacctagaaaaaccataagagaaactaataagaaagatctagagattaacgagtt 10109003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 35643752 - 35643698
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||||| |||||    
T  35643752 gacctagaaaaactataagagaaattattaagaaagatctagagattaatgagtt 35643698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 38178424 - 38178352
Alignment:
Q  169 tcgctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||| | ||| |||||||||||| |||||||||||||||||| |||||  |||| ||||| |||||    
T  38178424 tcgctagaggtagaggaagacctagaaaaactataagagaaactattaacaaagacctagacattaatgagtt 38178352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 39967643 - 39967591
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||||| |||||    
T  39967643 cctagaaaaactataagagaaactattaagaaagatctagcgattaatgagtt 39967591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 16994590 - 16994543
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagatta 234  Q
    |||||||||||| |||| |||||||||||||||| |||||||||||||    
T  16994590 gacctagaaaaactatatgagaaactattaagaatgatttagagatta 16994543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 28169515 - 28169582
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||| | ||| |||||| ||||| ||||||||||||||||| ||||||||| |||||||| |||||    
T  28169515 agaggtagaggaagacctaaaaaaactataagagaaactattaggaaagattttgagattaatgagtt 28169582  T

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Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 5127414 - 5127376
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagattta 227  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  5127414 cctagaaaaactataagagaaactattaagaaagattta 5127376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 16351514 - 16351568
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||| ||||||||||||||||| ||| |||||||||| |||||    
T  16351514 gacctagaaaaactattagagaaactattaagaaggatctagagattaatgagtt 16351568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 17491800 - 17491746
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| | |||||||||||||||||||||| || |||||||| |||||    
T  17491800 gacctagaaaaactgtaagagaaactattaagaaagacttggagattaatgagtt 17491746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 23023361 - 23023415
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| |||||||||||||| |||||||||| || ||||||| |||||    
T  23023361 gacctagaaaaactataagagaaactactaagaaagatctacagattaatgagtt 23023415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 24399931 - 24399881
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||||||||||||||| ||| | |||||||| |||||    
T  24399931 tagaaaaattataagagaaactattaagaaggatctcgagattaatgagtt 24399881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 28269824 - 28269771
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||||||||||||||||| || ||||||||||| |||| |||||    
T  28269824 gacctagaaaaattataagagaaactatt-agcaagatttagaggttaatgagtt 28269771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 45512641 - 45512587
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||||||||||||||| |||||| || |||||||| |||||    
T  45512641 gacctagaaaaactataagagaaactattaggaaagacttggagattaatgagtt 45512587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 2216409 - 2216477
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||| | ||| ||||||||||||  |||||||||||||||||| ||||||||||||| || |||||    
T  2216409 ctagaggtagaggaagacctagaaaaaacataagagaaactattaag-aagatttagagatcaatgagtt 2216477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 10080068 - 10079999
Alignment:
Q  172 ctagaggtggtggatgacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||| | ||| |||||||| ||| ||||||| ||||| ||||||||||| |||||||||| |||||    
T  10080068 ctagaggtagaggaagacctagagaaactataagaaaaactgttaagaaagatctagagattaatgagtt 10079999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 79167 - 79211
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||| | ||||||||||||||||||||||||| ||||||||||    
T  79167 tagaaacactataagagaaactattaagaaagatctagagattaa 79211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 9905028 - 9904980
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| || ||||||||||||||| ||||||||||| |||||    
T  9905028 gacctagaaaaactacaagagaaactattaataaagatttagaaattaa 9904980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 24558619 - 24558667
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||| |||||||  |||||||||| ||||||||||||||||||||||||    
T  24558619 gaccgagaaaaacaataagagaaattattaagaaagatttagagattaa 24558667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 29520787 - 29520839
Alignment:
Q  189 cctagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||| ||||||||||||| ||| ||| |||||||||||||| |||||    
T  29520787 cctagaaaaactataagagaaactgttaggaacgatttagagattaatgagtt 29520839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 13589619 - 13589681
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaacgagtt--atcaaaatat 251  Q
    |||||||| |||||||||||||||||  ||||||||| ||||||| |||||  ||||||||||    
T  13589619 tagaaaaactataagagaaactattagaaaagatttaaagattaatgagttgaatcaaaatat 13589681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 30559836 - 30559883
Alignment:
Q  194 aaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||| ||||||||||||||| | |||||||||||||||||| |||||    
T  30559836 aaaaactataagagaaactatcaggaaagatttagagattaatgagtt 30559883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 39388918 - 39388973
Alignment:
Q  187 gacctagaaaaattataa-gagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||| ||||| |||||||||||| ||||||| |||||||||| |||||    
T  39388918 gacctagaaaaactataaagagaaactattaggaaagatctagagattaatgagtt 39388973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 7615733 - 7615683
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||||||||||||||| |||||||||| ||||| | ||||| |||||    
T  7615733 tagaaaaattataagagaaaatattaagaaaaatttaaaaattaatgagtt 7615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 14459044 - 14459086
Alignment:
Q  200 tataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||    
T  14459044 tataagagaaactattaggaaagatttggagattaatgagtta 14459086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 30198408 - 30198358
Alignment:
Q  191 tagaaaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    |||||||| ||||||||||| ||||||||||||| | |||||||| |||||    
T  30198408 tagaaaaactataagagaaattattaagaaagatattgagattaatgagtt 30198358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 36069746 - 36069792
Alignment:
Q  195 aaaattataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  36069746 aaaattataagggaaactattaacaaatatttagagattaatgagtt 36069792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 5908782 - 5908819
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagat 224  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  5908782 gacctagaaaaactataagagaaactattaaaaaagat 5908819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 38392039 - 38391986
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagt 240  Q
    |||||||||||| |||| ||||||| |||||||||||| || ||||||| ||||    
T  38392039 gacctagaaaaactatatgagaaaccattaagaaagatctacagattaatgagt 38391986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 45419358 - 45419411
Alignment:
Q  174 agaggtggtggatgacctagaaaaattataagagaaactattaagaaagattta 227  Q
    |||||| | ||| |||||||||||| ||||||||||||||||| ||||| ||||    
T  45419358 agaggtagaggaagacctagaaaaactataagagaaactattaggaaaggttta 45419411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 9070124 - 9070172
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    |||||||||||| ||||||| ||||||||| || |||| ||||||||||    
T  9070124 gacctagaaaaactataagaaaaactattatgatagatctagagattaa 9070172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 30783174 - 30783134
Alignment:
Q  201 ataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||||||||| |||||||| |||||||||| |||||    
T  30783174 ataagagaaactatttagaaagatctagagattaatgagtt 30783134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 17680 - 17723
Alignment:
Q  192 agaaaaattataagagaaactattaagaaagatttagagattaa 235  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  17680 agaaaaaatataagagaaactattaaaaaagatttagagattaa 17723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 66673 - 66728
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    |||||||||||||||||| | ||| ||||||||||||| |||||||||| ||||||    
T  66673 gacctagaaaaattataaaaaaaattattaagaaagatctagagattaatgagtta 66728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 11936 - 11986
Alignment:
Q  190 ctagaaaaattataagagaaactattaagaaagatttagagattaacgagt 240  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||| ||||    
T  11936 ctagaaaaactataagagaaactattaagaaggatctagagattaatgagt 11986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1259 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1259
Description:

Target: scaffold1259; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 1665 - 1610
Alignment:
Q  187 gacctagaaaaattataagagaaactattaagaaagatttagagattaacgagtta 242  Q
    |||||||||||| |||||||||||||||||  ||||||||| || |||| ||||||    
T  1665 gacctagaaaaactataagagaaactattagaaaagatttaaaggttaatgagtta 1610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 2434 - 2393
Alignment:
Q  200 tataagagaaactattaagaaagatttagagattaacgagtt 241  Q
    ||||||||| ||||||||||||||| |||||||||| |||||    
T  2434 tataagagagactattaagaaagatctagagattaatgagtt 2393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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