View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0538_low_39 (Length: 304)
Name: NF0538_low_39
Description: NF0538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0538_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 45308815 - 45309109
Alignment:
| Q |
1 |
atatataatgaaaactaaaacattgctagtctcgtcctttttcctcatcttgattattaatattacttttggtattgtccacagtgataatttcaatgag |
100 |
Q |
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| T |
45308815 |
atatataatgaaaactaaaacattgctagtctcgtcctttttcctcatcttgattattaatattacttttggtattgtccacagtgataatttcaatgag |
45308914 |
T |
|
| Q |
101 |
tttagaatccctaataaggttgtcaagtccttatgcaaagacactgatgaccataaactttgccatgatgtcctctaccccgtgaaaacctcaaacccaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45308915 |
tttagaatccctaataaggttgtcaagtccttatgcaaagacactgatgaccataaactttgccatgatgtcctctaccccgtgaaaacctcaaacccaa |
45309014 |
T |
|
| Q |
201 |
tagattatattgatgttgtggtgaagaacttgatggaaagcgtagaaaacgcatttaatgacatgagtaataaacttagttctatggagaataat |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45309015 |
tagattatattgatgttgtggtgaagaacttgatggaaagcgtagaaaacgcatttaatgacatgagtaataaacttagttctatggagaataat |
45309109 |
T |
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