View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0538_low_86 (Length: 202)
Name: NF0538_low_86
Description: NF0538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0538_low_86 |
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Alignment Details
Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 9593835 - 9593982
Alignment:
| Q |
1 |
aaaatgagttacttgggtgtaggtgttagtcctggaactgttccagtttatcatagtacaaacatgaaagtgttggataggagggttagaataactgagt |
100 |
Q |
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| T |
9593835 |
aaaatgagttacttgggtgtaggtgttagtcctggaactgttccagtttatcatagtacaaacatgaaagtgttggataggagggttagaataactgagt |
9593934 |
T |
|
| Q |
101 |
tggttttgaggtttgtgaatcttggtttaggagttcttgctgttgttc |
148 |
Q |
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||||||||||||||||||||||||| |||||||||||||| ||||||| |
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| T |
9593935 |
tggttttgaggtttgtgaatcttggcttaggagttcttgcagttgttc |
9593982 |
T |
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