View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0539_low_29 (Length: 236)

Name: NF0539_low_29
Description: NF0539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0539_low_29
NF0539_low_29
[»] chr7 (46 HSPs)
chr7 (99-236)||(12841366-12841503)
chr7 (99-236)||(11594014-11594151)
chr7 (99-236)||(33349897-33350034)
chr7 (99-236)||(37617999-37618136)
chr7 (99-236)||(36652046-36652183)
chr7 (99-236)||(49029330-49029467)
chr7 (99-236)||(31005277-31005414)
chr7 (99-236)||(34869474-34869611)
chr7 (99-236)||(35906292-35906429)
chr7 (99-236)||(13859099-13859236)
chr7 (99-236)||(43281728-43281865)
chr7 (99-236)||(44855263-44855400)
chr7 (100-232)||(31682697-31682829)
chr7 (107-236)||(35559084-35559213)
chr7 (99-232)||(39906467-39906598)
chr7 (99-236)||(46355947-46356084)
chr7 (99-235)||(29650438-29650574)
chr7 (99-236)||(6374922-6375059)
chr7 (99-236)||(22349674-22349811)
chr7 (99-236)||(45836573-45836708)
chr7 (99-236)||(2885813-2885950)
chr7 (103-236)||(24598278-24598411)
chr7 (98-235)||(36869336-36869473)
chr7 (99-236)||(43491362-43491499)
chr7 (99-195)||(33073006-33073102)
chr7 (102-236)||(15682231-15682365)
chr7 (99-236)||(38607058-38607183)
chr7 (99-193)||(32631630-32631724)
chr7 (99-236)||(7273154-7273291)
chr7 (158-236)||(38900070-38900148)
chr7 (99-235)||(23404471-23404607)
chr7 (118-236)||(31681111-31681226)
chr7 (162-236)||(40980019-40980093)
chr7 (99-149)||(46014359-46014409)
chr7 (99-176)||(33139208-33139285)
chr7 (100-184)||(25579220-25579304)
chr7 (188-235)||(48919255-48919302)
chr7 (99-157)||(7273093-7273151)
chr7 (98-176)||(26925263-26925341)
chr7 (197-236)||(21078069-21078108)
chr7 (202-236)||(27648937-27648971)
chr7 (202-236)||(32631721-32631755)
chr7 (51-79)||(1740715-1740743)
chr7 (51-79)||(14593679-14593707)
chr7 (51-79)||(16013202-16013230)
chr7 (51-79)||(36514541-36514569)
[»] chr4 (47 HSPs)
chr4 (99-236)||(48174184-48174321)
chr4 (99-236)||(31959905-31960042)
chr4 (99-236)||(52569606-52569743)
chr4 (99-236)||(56375344-56375481)
chr4 (99-236)||(436283-436420)
chr4 (103-236)||(4440911-4441044)
chr4 (99-236)||(33227263-33227400)
chr4 (99-236)||(53707848-53707985)
chr4 (99-236)||(33190939-33191076)
chr4 (103-236)||(1777108-1777241)
chr4 (99-236)||(50287016-50287153)
chr4 (99-234)||(43433978-43434113)
chr4 (99-235)||(48622635-48622771)
chr4 (99-236)||(23906388-23906523)
chr4 (99-228)||(20192087-20192216)
chr4 (106-236)||(46582916-46583047)
chr4 (99-236)||(39708487-39708624)
chr4 (99-236)||(8286485-8286630)
chr4 (99-236)||(27450270-27450407)
chr4 (99-236)||(32479092-32479229)
chr4 (99-236)||(39100627-39100763)
chr4 (99-236)||(50679559-50679695)
chr4 (138-236)||(21236951-21237049)
chr4 (99-236)||(37773542-37773679)
chr4 (115-236)||(47265286-47265407)
chr4 (99-232)||(27983247-27983380)
chr4 (99-236)||(37797906-37798042)
chr4 (99-236)||(20591396-20591528)
chr4 (103-236)||(26037596-26037729)
chr4 (99-236)||(28236237-28236373)
chr4 (99-215)||(20601759-20601874)
chr4 (99-236)||(20821099-20821235)
chr4 (103-236)||(16002984-16003117)
chr4 (173-236)||(6957726-6957789)
chr4 (173-236)||(12494791-12494854)
chr4 (99-233)||(41009444-41009577)
chr4 (173-236)||(7947065-7947128)
chr4 (166-236)||(50862764-50862835)
chr4 (173-236)||(21528416-21528479)
chr4 (100-236)||(53518414-53518547)
chr4 (99-236)||(1793514-1793653)
chr4 (103-224)||(28351617-28351738)
chr4 (99-159)||(20131167-20131227)
chr4 (106-232)||(51421791-51421917)
chr4 (100-236)||(1211482-1211617)
chr4 (99-155)||(20605251-20605307)
chr4 (131-235)||(35690357-35690461)
[»] chr8 (31 HSPs)
chr8 (99-236)||(11523814-11523951)
chr8 (99-236)||(12491229-12491366)
chr8 (99-236)||(36545203-36545340)
chr8 (99-236)||(36565332-36565469)
chr8 (99-236)||(40813378-40813515)
chr8 (99-236)||(42854095-42854232)
chr8 (99-235)||(36395041-36395177)
chr8 (99-236)||(21121200-21121337)
chr8 (99-236)||(39946911-39947048)
chr8 (117-236)||(2796625-2796744)
chr8 (119-236)||(42469818-42469935)
chr8 (106-236)||(37077812-37077942)
chr8 (99-236)||(18125227-18125363)
chr8 (100-236)||(26904997-26905133)
chr8 (99-236)||(8932756-8932894)
chr8 (146-235)||(2027631-2027720)
chr8 (97-193)||(12025841-12025937)
chr8 (197-235)||(25473495-25473533)
chr8 (99-184)||(43904808-43904893)
chr8 (172-236)||(14742170-14742234)
chr8 (198-236)||(25288917-25288955)
chr8 (198-236)||(25300252-25300290)
chr8 (99-236)||(29520704-29520840)
chr8 (99-236)||(32043644-32043781)
chr8 (99-141)||(6510614-6510656)
chr8 (198-236)||(25439478-25439516)
chr8 (131-236)||(5266016-5266120)
chr8 (99-211)||(45419291-45419401)
chr8 (151-223)||(9904986-9905058)
chr8 (99-207)||(18751996-18752104)
chr8 (51-79)||(30456547-30456575)
[»] chr5 (26 HSPs)
chr5 (99-236)||(4496438-4496575)
chr5 (99-236)||(1287670-1287807)
chr5 (99-236)||(12492475-12492612)
chr5 (99-236)||(20456827-20456964)
chr5 (99-236)||(24178564-24178701)
chr5 (99-236)||(38685021-38685158)
chr5 (99-236)||(2075564-2075702)
chr5 (103-236)||(2915586-2915719)
chr5 (99-236)||(28976950-28977087)
chr5 (99-236)||(10639358-10639493)
chr5 (99-236)||(14665768-14665905)
chr5 (99-232)||(16347473-16347606)
chr5 (99-236)||(1275318-1275455)
chr5 (99-236)||(3301898-3302035)
chr5 (134-236)||(13561477-13561579)
chr5 (150-236)||(34273118-34273204)
chr5 (137-236)||(14911264-14911363)
chr5 (99-236)||(38501509-38501646)
chr5 (178-236)||(29816515-29816573)
chr5 (189-236)||(16913974-16914021)
chr5 (99-231)||(26884786-26884916)
chr5 (133-183)||(17340580-17340630)
chr5 (198-236)||(28276391-28276429)
chr5 (102-176)||(36215555-36215629)
chr5 (52-81)||(4505018-4505047)
chr5 (104-160)||(43475299-43475355)
[»] chr1 (37 HSPs)
chr1 (99-236)||(1210799-1210936)
chr1 (98-236)||(30202221-30202359)
chr1 (98-236)||(49347484-49347622)
chr1 (99-236)||(8671972-8672109)
chr1 (99-236)||(34792440-34792577)
chr1 (99-236)||(4029176-4029313)
chr1 (99-235)||(9592788-9592924)
chr1 (99-236)||(22090150-22090287)
chr1 (99-236)||(51602110-51602247)
chr1 (99-236)||(32231045-32231182)
chr1 (99-236)||(51440856-51440993)
chr1 (99-236)||(25979322-25979459)
chr1 (99-235)||(696323-696459)
chr1 (99-236)||(4001546-4001683)
chr1 (99-236)||(43240470-43240607)
chr1 (99-236)||(8391826-8391963)
chr1 (99-236)||(38807762-38807899)
chr1 (108-236)||(39318193-39318320)
chr1 (129-236)||(37311846-37311953)
chr1 (99-193)||(15085988-15086082)
chr1 (99-193)||(32082879-32082973)
chr1 (162-232)||(52921197-52921267)
chr1 (152-236)||(4415455-4415540)
chr1 (99-236)||(52561680-52561817)
chr1 (99-184)||(27847948-27848033)
chr1 (117-236)||(478750-478869)
chr1 (197-236)||(32079266-32079305)
chr1 (100-235)||(32404618-32404753)
chr1 (99-221)||(9509372-9509494)
chr1 (134-235)||(9599486-9599587)
chr1 (99-226)||(34827205-34827332)
chr1 (117-235)||(37462967-37463086)
chr1 (202-236)||(15086079-15086113)
chr1 (138-184)||(31979745-31979791)
chr1 (99-176)||(39140574-39140651)
chr1 (99-224)||(48431509-48431634)
chr1 (51-79)||(26016355-26016383)
[»] chr2 (30 HSPs)
chr2 (99-236)||(24583723-24583860)
chr2 (99-236)||(36183505-36183642)
chr2 (100-236)||(3243744-3243880)
chr2 (99-236)||(451739-451876)
chr2 (99-236)||(2610642-2610779)
chr2 (99-236)||(38452777-38452913)
chr2 (99-236)||(3866126-3866263)
chr2 (103-236)||(4807653-4807786)
chr2 (99-236)||(7326251-7326388)
chr2 (99-236)||(12734753-12734891)
chr2 (99-236)||(8180834-8180971)
chr2 (116-236)||(28508749-28508869)
chr2 (99-236)||(38429938-38430075)
chr2 (99-236)||(45367716-45367853)
chr2 (103-235)||(11992200-11992332)
chr2 (102-236)||(39029638-39029772)
chr2 (99-236)||(25834735-25834869)
chr2 (99-236)||(41197318-41197456)
chr2 (99-235)||(18424469-18424605)
chr2 (99-236)||(41763134-41763270)
chr2 (99-193)||(23997668-23997762)
chr2 (99-236)||(6237844-6237981)
chr2 (162-236)||(35643065-35643139)
chr2 (149-236)||(31959625-31959712)
chr2 (188-236)||(9996717-9996765)
chr2 (102-184)||(12141601-12141683)
chr2 (202-236)||(23997759-23997793)
chr2 (202-236)||(30743686-30743720)
chr2 (203-236)||(30306190-30306223)
chr2 (51-79)||(9647941-9647969)
[»] chr3 (37 HSPs)
chr3 (102-236)||(54279077-54279211)
chr3 (99-236)||(28245491-28245628)
chr3 (99-236)||(52138854-52138991)
chr3 (99-236)||(5168886-5169023)
chr3 (99-236)||(22126-22263)
chr3 (99-236)||(35033200-35033337)
chr3 (99-232)||(47233691-47233824)
chr3 (99-236)||(51447808-51447938)
chr3 (99-236)||(48508289-48508426)
chr3 (99-228)||(33272122-33272250)
chr3 (99-232)||(25191431-25191564)
chr3 (106-193)||(53519653-53519740)
chr3 (99-232)||(38850174-38850308)
chr3 (99-219)||(45728201-45728324)
chr3 (157-236)||(12096796-12096875)
chr3 (99-194)||(38060485-38060580)
chr3 (99-231)||(43694867-43694993)
chr3 (99-236)||(39235192-39235329)
chr3 (135-236)||(54425056-54425157)
chr3 (129-236)||(19162678-19162785)
chr3 (99-236)||(52678941-52679074)
chr3 (110-215)||(48953533-48953638)
chr3 (99-183)||(38430902-38430986)
chr3 (188-236)||(52156175-52156223)
chr3 (99-236)||(19676172-19676308)
chr3 (99-235)||(3186822-3186958)
chr3 (99-158)||(19737051-19737110)
chr3 (99-158)||(19757954-19758013)
chr3 (101-236)||(30294212-30294347)
chr3 (189-236)||(38060858-38060905)
chr3 (129-236)||(45289182-45289289)
chr3 (99-236)||(54128432-54128570)
chr3 (179-236)||(17022763-17022820)
chr3 (99-236)||(39600772-39600909)
chr3 (199-236)||(53262295-53262332)
chr3 (100-160)||(41842678-41842738)
chr3 (204-236)||(54422934-54422966)
[»] scaffold0018 (1 HSPs)
scaffold0018 (99-236)||(31522-31659)
[»] scaffold0570 (1 HSPs)
scaffold0570 (99-236)||(1039-1176)
[»] chr6 (25 HSPs)
chr6 (99-236)||(28085430-28085567)
chr6 (99-236)||(30031310-30031447)
chr6 (99-236)||(35043532-35043669)
chr6 (99-222)||(7133800-7133923)
chr6 (99-222)||(7136723-7136846)
chr6 (98-236)||(32755974-32756112)
chr6 (99-233)||(5258242-5258376)
chr6 (99-233)||(21351931-21352065)
chr6 (113-235)||(12890643-12890765)
chr6 (99-236)||(5631876-5632013)
chr6 (99-236)||(608211-608352)
chr6 (101-236)||(20427728-20427862)
chr6 (110-236)||(5080905-5081031)
chr6 (99-195)||(10099991-10100087)
chr6 (101-236)||(9706826-9706961)
chr6 (99-236)||(33497016-33497150)
chr6 (99-236)||(30679460-30679587)
chr6 (168-236)||(34143856-34143924)
chr6 (168-236)||(34156472-34156540)
chr6 (99-236)||(9593799-9593934)
chr6 (99-192)||(14030861-14030954)
chr6 (99-232)||(28026922-28027055)
chr6 (99-228)||(2689694-2689817)
chr6 (197-236)||(10098985-10099024)
chr6 (137-235)||(6055863-6055961)
[»] scaffold0045 (1 HSPs)
scaffold0045 (99-227)||(86709-86837)
[»] scaffold0113 (1 HSPs)
scaffold0113 (99-230)||(11644-11775)
[»] scaffold0036 (1 HSPs)
scaffold0036 (99-236)||(4372-4499)
[»] scaffold0024 (1 HSPs)
scaffold0024 (103-236)||(82779-82909)
[»] scaffold0692 (1 HSPs)
scaffold0692 (115-235)||(4706-4826)
[»] scaffold0041 (1 HSPs)
scaffold0041 (154-236)||(16687-16769)
[»] scaffold0157 (1 HSPs)
scaffold0157 (173-236)||(25623-25686)
[»] scaffold1318 (1 HSPs)
scaffold1318 (197-236)||(483-522)
[»] scaffold0199 (1 HSPs)
scaffold0199 (198-236)||(14736-14774)
[»] scaffold0171 (1 HSPs)
scaffold0171 (99-228)||(7495-7623)


Alignment Details
Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 12841503 - 12841366
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||    
T  12841503 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaagaaaactatta 12841404  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12841403 gagaaaccattagaaaggatttagaggtcaatgagttg 12841366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 11594014 - 11594151
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  11594014 catgtagagagaagacccgtagatgccatggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 11594113  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11594114 gagaaaccattagaaaggatttagaggtcaatgagttg 11594151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 33350034 - 33349897
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  33350034 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 33349935  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| |||||||||||||||||||||    
T  33349934 gagaaaccattagaaatgatttagaggtcaatgagttg 33349897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 37617999 - 37618136
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  37617999 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 37618098  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||||||||| |||||    
T  37618099 gagaaaccattagaaaggatttagaggtcaataagttg 37618136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 36652046 - 36652183
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||||||| ||    
T  36652046 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatagaggatagtcaagttaaaagaggtagaggaagacctaagaaaactatta 36652145  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  36652146 gagaaaccattagaaaggattcagaggtcaatgagttg 36652183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 49029330 - 49029467
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  49029330 catgtagagagaagacccgtagatgccgtggtaagacgaatagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 49029429  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49029430 gagaaaccattagaaaggatttagaggtcaatgagttg 49029467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 31005277 - 31005414
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  31005277 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 31005376  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||| ||||||||| |||| |||||||||||    
T  31005377 gagaaaccatttgaaaggattcagagatcaatgagttg 31005414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 34869474 - 34869611
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  34869474 catgtagagagaagacccgtaaatgccgtggtaagaagagtagatccaatggtggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 34869573  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34869574 gagaaaccattagaaaggatttagaggtcaatgagttg 34869611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 35906429 - 35906292
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  35906429 catgtagagagaagacccgtagatgccgtggtaagaagagtatatcatatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 35906330  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||| |||||||||||||||    
T  35906329 gagaaaccattagaaaggatttcgaggtcaatgagttg 35906292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 13859236 - 13859099
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| | |||||||| ||    
T  13859236 catgtagagagaagacccgtagatgctgtcgtaagaagagtagatcaaatggaggagagtcaagttagaagaggtagaggaagacctaggaaaactatta 13859137  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  13859136 gagaaaccattagaaaggatttagaggccaatgagttg 13859099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 43281728 - 43281865
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| | |     
T  43281728 catgtagagagaagacccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattc 43281827  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| |||||||||||||||||||||    
T  43281828 gagaaaccattagaaaagatttagaggtcaatgagttg 43281865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 44855400 - 44855263
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | |||||||| ||    
T  44855400 catgtagagagaagacccgtagatgccgtcataagaagagtagatcaaatggaggagagtcaagttaaaagaagtagaggaagacctaggaaaactatta 44855301  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| |||||||||||||||||||||    
T  44855300 gagaaaccattagaaaagatttagaggtcaatgagttg 44855263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 100 - 232
Target Start/End: Complemental strand, 31682829 - 31682697
Alignment:
Q  100 atgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatag 199  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||| ||||||| | |||||||| |||    
T  31682829 atgtagagagaagacccgtagatgccgtcataagaagagtagatcaaatggaggagagtcaagttagaagaggtagaggaagacctaggaaaactattag 31682730  T
Q  200 agaaaccattagaaaggatttagaggtcaatga 232  Q
    |||||||||||||||||||||||||||||||||    
T  31682729 agaaaccattagaaaggatttagaggtcaatga 31682697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 35559213 - 35559084
Alignment:
Q  107 gagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaacc 206  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||||||||    
T  35559213 gagaagacccctagatgtcgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaacc 35559114  T
Q  207 attagaaaggatttagaggtcaatgagttg 236  Q
    |||||||| |||||||||||||||||||||    
T  35559113 attagaaaagatttagaggtcaatgagttg 35559084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 39906598 - 39906467
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| | |||||||| ||    
T  39906598 catgtagagagaagacccatagatgtcgtggtaagaagagtagatcaaatggaggag--tcaagttaaaagaggtagaggaagacctaggaaaactatta 39906501  T
Q  199 gagaaaccattagaaaggatttagaggtcaatga 232  Q
    ||||||||||||||||||||||||||||||||||    
T  39906500 gagaaaccattagaaaggatttagaggtcaatga 39906467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 46356084 - 46355947
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||||| ||    
T  46356084 catgtagagagaagacacgtagatgttgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaaaacctaggaaaactatta 46355985  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
     |||||||||||||||||||||| ||||||||||||||    
T  46355984 aagaaaccattagaaaggatttaaaggtcaatgagttg 46355947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 29650438 - 29650574
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||| |||||||| | |     
T  29650438 catgtagagagaagacccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtaaaggaaaacctaagaaaaccattc 29650537  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    |||||||||||||||| ||||||||||||||||||||    
T  29650538 gagaaaccattagaaaagatttagaggtcaatgagtt 29650574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 6374922 - 6375059
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||||||| |||||| ||||||||||||||||||| ||||| | | |||||||| ||    
T  6374922 catgtagagagaagaccagtagatgctgtggtaagaagggtagatcaaatgtaggagaatcaagttaaaagaggtagaggaagatctaggaaaactatta 6375021  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  6375022 gagaaaccattagaaagaatttagaggtcagtgagttg 6375059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 22349674 - 22349811
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||  || | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | |||||||| ||    
T  22349674 catgtagagagaagacccgtaattgtcatggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagaactaggaaaactatta 22349773  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||| |||||||||| |||||||| |||||    
T  22349774 gagaaaccattaaaaaggatttaaaggtcaataagttg 22349811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 45836708 - 45836573
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||  | |||||||| | ||||| | || ||||| ||    
T  45836708 catgtagagagaagacccgtagatgccgttgtaagaagagtagatcaaatggaggagagttaggtt--atgaggtagagggagacctaggacaactatta 45836611  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45836610 gagaaaccattagaaaggatttagaggtcaatgagttg 45836573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 2885950 - 2885813
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||| || |||||||||||| ||||||| | ||||||||  |    
T  2885950 catgtagagagaagatccgtagatgccgttgtacgaagagtagatcagatggaggagagtcaggtcaaaagaggtagaagaagacctaggaaaactataa 2885851  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  2885850 gagaaaccattagaaatgatttagtggtcaatgagttg 2885813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 24598411 - 24598278
Alignment:
Q  103 tagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagaga 202  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||||| |||||||  | | ||||    
T  24598411 tagagagcagacccgtagatgccgttgtaagaagagtagatcaaatgaaggtgagtcaggttaaaagaggtagaggaagacctaagaaaatcattcgaga 24598312  T
Q  203 aaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||| |||||||||||||||||||||    
T  24598311 aaccattagaaaagatttagaggtcaatgagttg 24598278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 98 - 235
Target Start/End: Complemental strand, 36869473 - 36869336
Alignment:
Q  98 tcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaat 197  Q
    ||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||| || ||||||| |||||||   |||||||| |    
T  36869473 tcatgtagagagaagacccgtagatgctgtcagaagaagagtagatcaaatggaggagagtcaagttagaataggtagaggaagacctgggaaaactatt 36869374  T
Q  198 agagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    | |||||||||||||||||||||||| |||||||||||    
T  36869373 aaagaaaccattagaaaggatttagatgtcaatgagtt 36869336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 43491362 - 43491499
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| || |||||||||||| ||||||| | ||||| ||  |    
T  43491362 catgtagagagaagacccgtagatgccgtcgtaagaagagttgatcagatggaggagagtcaggtcaaaagaggtagaggaagacctaggaaaattataa 43491461  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  43491462 gagaaaccattagaaagaatttagaggtcaataagttg 43491499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 99 - 195
Target Start/End: Original strand, 33073006 - 33073102
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaacta 195  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | ||||||||    
T  33073006 catgtagagagaagacccgtagatgtcgtggtaagaagagtagatcaaatggagaagagtcaagttaaaagaggtagaggaagacctaggaaaacta 33073102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 15682231 - 15682365
Alignment:
Q  102 gtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagag 201  Q
    |||||||||||| || |||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||| ||  || ||| | ||||||||  ||||    
T  15682231 gtagagagaagatccatagatgccgtcgtaagaagagtagatcaaattgaggaaagtcaagtcaaaagaggtggagaaaaacctaggaaaactataagag 15682330  T
Q  202 aaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||| ||||||||||||||||||||||||| |||||    
T  15682331 aaatcattagaaaggatttagaggtcaataagttg 15682365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 38607058 - 38607183
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| |||||| ||| ||||||| ||||             
T  38607058 catgtagagagaagacccgtagatgccgttgttagaagagtagatcaaatggaggagagtcacgttagaagagggagaggaagacctaaga--------- 38607148  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
       |||||||||||||||||||||||||||||||||||    
T  38607149 ---aaaccattagaaaggatttagaggtcaatgagttg 38607183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 32631630 - 32631724
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaac 193  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||    
T  32631630 catgtagagagaagacccgtagatgccgttgttagaagagtggatcaaatggaggatagtcaggttaaaagaggtagaggaagacctaagaaaac 32631724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 7273154 - 7273291
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||| |||||| |||||| ||| | |||||||||   |||||||||||||| || |||||||||||| ||||||| | ||||||||  |    
T  7273154 catgtagagagaagatccgtaggtgccgtcgtatgtagagtagattggatggaggagagtcaggtcaaaagaggtagaggaagacctatgaaaactataa 7273253  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||  ||| ||||||||||||||||    
T  7273254 gagaaaccattagaaaatattcagaggtcaatgagttg 7273291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 38900070 - 38900148
Alignment:
Q  158 tcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38900070 tcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttg 38900148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 23404471 - 23404607
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||  |||||| |||||||| |||  ||||||||||||||||||||||||||||||| || |||||||||||| ||||||| | ||||| ||  |    
T  23404471 catgtagattgaagactcgtagatgtcgtcataagaagagtagatcaaatggaggagagtcaggtcaaaagaggtagaagaagacctaggaaaattataa 23404570  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
     ||||||||||| ||   ||||| || ||||||||||    
T  23404571 aagaaaccattacaattaatttatagatcaatgagtt 23404607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 31681226 - 31681111
Alignment:
Q  118 tagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaagga 217  Q
    |||||||||| ||||||||||| ||||||||||| ||||||||  |||||| ||||||| | ||||| | ||||   | |||||||||||||||||||||    
T  31681226 tagatgccgtcgtaagaagagttgatcaaatggaagagagtcagtttaaaacaggtagagggagacctaggaaa---attagagaaaccattagaaagga 31681130  T
Q  218 tttagaggtcaatgagttg 236  Q
    ||||  |||||||||||||    
T  31681129 tttaagggtcaatgagttg 31681111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 40980093 - 40980019
Alignment:
Q  162 gttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||| ||||||| | ||||||||  |||||||| |||||||| |||||||||||||||||||||    
T  40980093 gttaaaagaggtagaggaagacctaggaaaactataagagaaactattagaaaagatttagaggtcaatgagttg 40980019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 46014409 - 46014359
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatg 149  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  46014409 catgtagagagaagacccatagatgccgtcctaagaagagtagatcaaatg 46014359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 33139208 - 33139285
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtaga 176  Q
    ||||||||||||||||||| ||||||||| ||||||| |||| | || |||||| ||||| |||| ||||||| ||||    
T  33139208 catgtagagagaagacccgcagatgccgttgtaagaaaagtataacagatggagaagagttaagtcaaaagagataga 33139285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 25579304 - 25579220
Alignment:
Q  100 atgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagacc 184  Q
    |||||||||||||||  |||||| | |||||||||||||||||| | |||||||| |||||| | | ||||| || |||||||||    
T  25579304 atgtagagagaagacatgtagattctgtggtaagaagagtagattagatggaggatagtcaaatcacaagagttaaatgaagacc 25579220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 48919255 - 48919302
Alignment:
Q  188 gaaaactaatagagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  48919255 gaaaactattagaaaaaccattagaaatgatttagaggtcaatgagtt 48919302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 7273093 - 7273151
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagag 157  Q
    |||||| |||||||||| ||||||||||  ||| ||||||||||||| |||||||||||    
T  7273093 catgtacagagaagacctgtagatgccgccgtatgaagagtagatcagatggaggagag 7273151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 26925263 - 26925341
Alignment:
Q  98 tcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtaga 176  Q
    ||||| ||||||||||| ||||||||  || ||||||||||||||| | || ||||| |||| | ||||||||||||||    
T  26925263 tcatgcagagagaagactcgtagatgatgtagtaagaagagtagattagatagaggatagtcgaattaaaagaggtaga 26925341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 21078069 - 21078108
Alignment:
Q  197 tagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  21078069 tagagaaaccattagtaaagatttagaggtcaatgagttg 21078108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 27648937 - 27648971
Alignment:
Q  202 aaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||| |||||||||||||||||||||    
T  27648937 aaaccattagaaaagatttagaggtcaatgagttg 27648971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 32631721 - 32631755
Alignment:
Q  202 aaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||| |||||||||||||||||||||    
T  32631721 aaaccattagaaaagatttagaggtcaatgagttg 32631755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 1740715 - 1740743
Alignment:
Q  51 agcagagatgaggatgttgcgttggatgt 79  Q
    |||||||||||||||||||||||||||||    
T  1740715 agcagagatgaggatgttgcgttggatgt 1740743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 14593679 - 14593707
Alignment:
Q  51 agcagagatgaggatgttgcgttggatgt 79  Q
    |||||||||||||||||||||||||||||    
T  14593679 agcagagatgaggatgttgcgttggatgt 14593707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 16013202 - 16013230
Alignment:
Q  51 agcagagatgaggatgttgcgttggatgt 79  Q
    |||||||||||||||||||||||||||||    
T  16013202 agcagagatgaggatgttgcgttggatgt 16013230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Complemental strand, 36514569 - 36514541
Alignment:
Q  51 agcagagatgaggatgttgcgttggatgt 79  Q
    |||||||||||||||||||||||||||||    
T  36514569 agcagagatgaggatgttgcgttggatgt 36514541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 4e-65; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 48174321 - 48174184
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||    
T  48174321 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaagaaaactatta 48174222  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48174221 gagaaaccattagaaaggatttagaggtcaatgagttg 48174184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 31960042 - 31959905
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  31960042 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 31959943  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  31959942 gagaaactattagaaaggatttagaggtcaatgagttg 31959905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 52569743 - 52569606
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  52569743 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctacgaaaactatta 52569644  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
     |||||||||||||||||||||||||||||||||||||    
T  52569643 aagaaaccattagaaaggatttagaggtcaatgagttg 52569606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 56375344 - 56375481
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||| ||    
T  56375344 catgtagagagaagacccgtagatgccgtggtaagaagagtagataaaatggaggagagtcaagttaaaagaggtagaggaagacctaagaaaactatta 56375443  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||||| |||||||||    
T  56375444 gagaaaccattagaaaggatttagaggtgaatgagttg 56375481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 436283 - 436420
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  436283 catgtagagagaagacctgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 436382  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  436383 gagaaaccactagaaaggatttagaggtcaatgagttg 436420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 4440911 - 4441044
Alignment:
Q  103 tagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagaga 202  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||||    
T  4440911 tagagagaagacccgtagatgctgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagaga 4441010  T
Q  203 aaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||    
T  4441011 aaccattagaaaggatttagaggtcaatgagttg 4441044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 33227263 - 33227400
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||| ||    
T  33227263 catgtagagagaagacccgtagatgccgtgttaagaagagtagatcaaatggaagagagtcaagttaaaagaggtagatgaagacctaggaaaactatta 33227362  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    || |||||||||||||||||||||||||||||||||||    
T  33227363 gaaaaaccattagaaaggatttagaggtcaatgagttg 33227400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 53707848 - 53707985
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||| | |||||||| ||    
T  53707848 catgtagagagaagacccgtagatgccgtggtaagaagagtatatcaaatggaggatagtcaagttaaaagaggtagaggaagaccgaggaaaactatta 53707947  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  53707948 gagaaaccattagaaaggatttagaggtcaatgagttg 53707985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 33191076 - 33190939
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| | |||||||| ||    
T  33191076 catgtagagagaagacccgtagatgccgtgttaagaagggtagatcaaatggagaagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 33190977  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33190976 gagaaaccattagaaaggatttagaggtcaatgagttg 33190939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 1777241 - 1777108
Alignment:
Q  103 tagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagaga 202  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||||    
T  1777241 tagagagaagactcatagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagaga 1777142  T
Q  203 aaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||| |||||||||||||||||||||    
T  1777141 aaccattagaaaagatttagaggtcaatgagttg 1777108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 50287016 - 50287153
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  50287016 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcgaatggaggagagtcaagttaaaagaggtagaagaagacctatgaaaactatta 50287115  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||| || ||||| |||||||||||||||||||||||||    
T  50287116 gagtaatcattataaaggatttagaggtcaatgagttg 50287153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 99 - 234
Target Start/End: Original strand, 43433978 - 43434113
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  43433978 catgtagagagaagacccgtagatgccgtggtaagaagagtaaatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 43434077  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagt 234  Q
    |||||||||||  ||| |||||||||||||||||||    
T  43434078 gagaaaccattgaaaatgatttagaggtcaatgagt 43434113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 48622771 - 48622635
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  48622771 catgtagagagaagacccgtaaatgccgtggtaagaaaagaagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 48622672  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  48622671 gagaaatcattagaaaagatttagaggtcaatgagtt 48622635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 23906523 - 23906388
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| |  ||||||| ||    
T  23906523 catgtagagagaagac--gtagatgccgtggtaagaagagtagattaaatggaggagagtcaagttaaaaaaggtaaatgaagacctagaaaaactatta 23906426  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23906425 gagaaaccattagaaaggatttagaggtcaatgagttg 23906388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 99 - 228
Target Start/End: Original strand, 20192087 - 20192216
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||  | ||||||| ||    
T  20192087 catgtagagagaagacccgtagatgctgtggtaagaagagtatatcaaatggaggagagtcaagttaaaagaggtagtggaagacctgaaaaaactatta 20192186  T
Q  199 gagaaaccattagaaaggatttagaggtca 228  Q
    ||||||||||||||||||||||||||||||    
T  20192187 gagaaaccattagaaaggatttagaggtca 20192216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 46583047 - 46582916
Alignment:
Q  106 agagaagaccc-gtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaa 204  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||||||    
T  46583047 agagaagaccccgtagatgtcgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctatgaaaactattagagaaa 46582948  T
Q  205 ccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||| ||||||||||| ||||||||||||||    
T  46582947 ccattggaaaggatttaaaggtcaatgagttg 46582916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 39708487 - 39708624
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||| ||||||||| | |||||||||| ||||||||||||||||| |||||||||||||| || |||||||||||| ||||||| | ||||||||  |    
T  39708487 catgtatagagaagacacatagatgccgtcgtaagaagagtagatcagatggaggagagtcaggtcaaaagaggtagaggaagacctaggaaaactataa 39708586  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39708587 gagaaaccattagaaaggatttagaggtcaatgagttg 39708624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 8286485 - 8286630
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagtt--------aaaagaggtagatgaagaccaaagaa 190  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||        | |||||||||| ||||||| | |||    
T  8286485 catgtagagagaagacccgtagatgccgtcgtaagaagagtagatgaaatggaggagagtcaagttagaagaggacaagaggtagaggaagacctaggaa 8286584  T
Q  191 aactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  8286585 aactattagagaaaccattagaaaggatttagaggtcaatgagttg 8286630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 27450407 - 27450270
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||| ||||||||||||| | ||||||| |||||||  | |     
T  27450407 catgtagagagaagacccgtagatgccgttgtaagaagagtagatcaaatggagtagaatcaggttaaaagaggtaaaggaagacctaagaaaatcattc 27450308  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  27450307 gagaaaccattggaaaagatttagaggtcaatgagttg 27450270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 32479092 - 32479229
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||| || ||| ||||||||||| ||||||| |||||||| | |     
T  32479092 catgtagagaggagacctgtagaggccgttgtaagaagagtagatcaaatggaggagagacaggttgaaagaggtagaggaagacctaagaaaaccattc 32479191  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| |||||||||||||||||||||    
T  32479192 gagaaaccattagaaaagatttagaggtcaatgagttg 32479229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 39100763 - 39100627
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||| |||||||||| || ||||||||||||||||| ||||| || ||||| ||||||||||||||| ||||||| | |||||||| ||    
T  39100763 catgtagagagaagatccgtagatgc-gttgtaagaagagtagatcagatggaagatagtcaggttaaaagaggtagaggaagacctaggaaaactatta 39100665  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||| |||||||||||||||    
T  39100664 gagaaaccattagaaaggatttggaggtcaatgagttg 39100627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 50679559 - 50679695
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||| |||||| | ||||||| | | ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| | |||||||| ||    
T  50679559 catgtagaaagaagatc-gtagatgtcatcgtaagaagagtagattaaatggaggagagtcaagttagaagaggtagaggaagacctaggaaaactatta 50679657  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50679658 gagaaaccattagaaaggatttagaggtcaatgagttg 50679695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 21236951 - 21237049
Alignment:
Q  138 gtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21236951 gtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttg 21237049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 37773679 - 37773542
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||| ||| |||||||| ||  ||| ||||| ||||||||||||||||| ||||||||| |||||||||||||||||| ||| | |||||||| ||    
T  37773679 catgtagatagacgacccgtaaatatcgttgtaagtagagtagatcaaatggatgagagtcaatttaaaagaggtagatgaatacctaggaaaactatta 37773580  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||| |||||||||||||||    
T  37773579 gagaaaccattagaaaggatttggaggtcaatgagttg 37773542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 47265407 - 47265286
Alignment:
Q  115 ccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaa 214  Q
    ||||||||||||| ||||||||||||||  |||||||||||| || |||||||||||||||| ||||||| | |||||||| ||||||||||||||||||    
T  47265407 ccgtagatgccgtcgtaagaagagtagactaaatggaggagattctagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaa 47265308  T
Q  215 ggatttagaggtcaatgagttg 236  Q
    | ||||||||||||||||||||    
T  47265307 gaatttagaggtcaatgagttg 47265286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 232
Target Start/End: Original strand, 27983247 - 27983380
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||  |||||||| | |     
T  27983247 catgtagagagaagactcgtagatgccgttgtaagaagagtatatcaaatggaggagagtcaggttaaaagaggtagaggaagacataagaaaaccattc 27983346  T
Q  199 gagaaaccattagaaaggatttagaggtcaatga 232  Q
    || ||||| ||||||| ||||||||| |||||||    
T  27983347 gataaacctttagaaaagatttagagttcaatga 27983380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 37797906 - 37798042
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||  |||| ||||| | | |||||||| ||    
T  37797906 catgtagagagaagattcgtagatgccgtcgtaagaagagtagatcaaatggatgagagtcaggttaaaaga-ttagaggaagatctaggaaaactatta 37798004  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  37798005 gagaaatcattagaaaggatttagaagtcaatgagttg 37798042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 20591528 - 20591396
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||| | |||||| |||| ||||||||||| |||| |||||||||||||||||    ||||||||| ||||||| ||||||||||  |    
T  20591528 catgtagagagaagactcatagatgtcgtg-taagaagagtatatcagatggaggagagtcaagt----agaggtagaggaagacctaagaaaactataa 20591434  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||  ||||||||||||||||||||||||||||||||    
T  20591433 gagaccccattagaaaggatttagaggtcaatgagttg 20591396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 26037729 - 26037596
Alignment:
Q  103 tagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagaga 202  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||| ||| ||| | |||||| |  |||||    
T  26037729 tagagagaagacctgtaaatgccgtcgtaagaagagtagatcagatggaggagagtcaggttaaaagaggcagaggaaaacctaggaaaaccataagaga 26037630  T
Q  203 aaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||| ||||| || ||||||||||| |||||||||    
T  26037629 aactattaggaaagatttagaggtgaatgagttg 26037596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 28236237 - 28236373
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||  ||||||| ||| ||||||||||| |||||||||| ||||| |||||||||||  |||||| ||||||| | |||||||| ||    
T  28236237 catgtagagagaagacttgtagatgtcgtcgtaagaagagttgatcaaatggcggagaatcaagttaaaa-tggtagaggaagacctaggaaaactatta 28236335  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||| | ||| ||| |||||||||||||||||||||    
T  28236336 gagaaatctttataaatgatttagaggtcaatgagttg 28236373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 20601874 - 20601759
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| ||||||||||| |||||||||||| || | |||||||||||||| || |||||||||||| |||||||   ||||||||  |    
T  20601874 catgtagagagaagacctgtagatgccgttgtaagaagagtatataagatggaggagagtcaggtcaaaagaggtagaagaagacc-ttgaaaactataa 20601776  T
Q  199 gagaaaccattagaaag 215  Q
    |||||||||||||||||    
T  20601775 gagaaaccattagaaag 20601759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 20821235 - 20821099
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| ||||||||| |  ||| || ||||||| | |||||| ||| |||  | |||||||||||||||||||| | ||||||||  |    
T  20821235 catgtagagagaagacctgtagatgccttcataacaaaagtagattagatggagcagaatcagatcaaaagaggtagatgaagacctaggaaaactataa 20821136  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  20821135 gagaaa-cattagaaaggatttaaaggtcaatgagttg 20821099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 16002984 - 16003117
Alignment:
Q  103 tagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagaga 202  Q
    |||||||||||||||||||||||||  ||||||| ||| |||| ||||| || ||| | || ||||||  |||| ||| |||  | |||||||  |||||    
T  16002984 tagagagaagacccgtagatgccgtcataagaagggtaaatcagatggatgaaagttatgtcaaaagaaatagaggaataccgtaaaaaactataagaga 16003083  T
Q  203 aaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||  ||||||||||||||||||||    
T  16003084 aaccattagaaaaaatttagaggtcaatgagttg 16003117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 6957726 - 6957789
Alignment:
Q  173 tagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6957726 tagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttg 6957789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 12494791 - 12494854
Alignment:
Q  173 tagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12494791 tagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttg 12494854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 233
Target Start/End: Complemental strand, 41009577 - 41009444
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||| |||||||  || ||||| || ||||||| | ||||||| |||||||||||||| || ||||| |||||| |||||||   ||||||||  |    
T  41009577 catgtagaaagaagacatgttgatgcagtcgtaagaaaaatagatcagatggaggagagtcaggtcaaaagtggtagaggaagacc-tggaaaactataa 41009479  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgag 233  Q
    ||||||| |||||||| |||||||| |||||||||    
T  41009478 gagaaactattagaaatgatttagaagtcaatgag 41009444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 7947065 - 7947128
Alignment:
Q  173 tagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||||||||||||||||| |||||    
T  7947065 tagaggaagacctaagaaaactattagagaaaccatttgaaaggatttagaggtcaatcagttg 7947128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 50862764 - 50862835
Alignment:
Q  166 aaagaggtagatgaagaccaaagaaaactaataga-gaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||| ||||||| | |||||||| || | ||||||||||||||||||||||||||||||||||||    
T  50862764 aaagaggtagaggaagacctaggaaaactattaaaagaaaccattagaaaggatttagaggtcaatgagttg 50862835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 21528416 - 21528479
Alignment:
Q  173 tagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||| ||||||| |||||||| | | |||||||||||||||| |||||||||||||||||||||    
T  21528416 tagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagttg 21528479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 236
Target Start/End: Complemental strand, 53518547 - 53518414
Alignment:
Q  100 atgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatag 199  Q
    |||||||||||||||| || ||||| || ||| ||||||||||||| ||   |||||||||| | | |||||||||| |||| || |  |||||||  ||    
T  53518547 atgtagagagaagacctgtggatgctgtagtacgaagagtagatcagat---ggagagtcaaatcagaagaggtagaggaaggcctagaaaaactatgag 53518451  T
Q  200 agaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    | |||| | ||| || ||||||||||| |||||||||    
T  53518450 aaaaactaataggaaagatttagaggttaatgagttg 53518414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 1793514 - 1793653
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||  || |||| ||| ||||||| ||||||||| ||||||  |||||   | ||||||||||||  ||||||    |||||||  |    
T  1793514 catgtagagagaagacttgttgatgtcgtcgtaagaatagtagatcagatggag--gagtcgtatcaaaagaggtagagaaagacctcgaaaaactataa 1793611  T
Q  199 gagaaacc----attagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||    |||||||| |||||||||||||||||||||    
T  1793612 gagaaaccattaattagaaaagatttagaggtcaatgagttg 1793653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 224
Target Start/End: Original strand, 28351617 - 28351738
Alignment:
Q  103 tagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagaga 202  Q
    ||||||||||||| |||||  | || ||||| ||||||||||| |||||||| |||||  ||| ||||||||||  |||||| |  |||||||  |||||    
T  28351617 tagagagaagacctgtagactctgtagtaaggagagtagatcagatggaggatagtcagattacaagaggtagagaaagacctagaaaaactataagaga 28351716  T
Q  203 aaccattagaaaggatttagag 224  Q
    ||| ||||  || |||||||||    
T  28351717 aactattacgaaagatttagag 28351738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 20131227 - 20131167
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtc 159  Q
    |||||| ||||||||| |||||| | | | ||| |||||||||||||||||||||||||||    
T  20131227 catgtaaagagaagactcgtagaagtcatagtatgaagagtagatcaaatggaggagagtc 20131167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 51421791 - 51421917
Alignment:
Q  106 agagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaac 205  Q
    |||||||||| |||||||  ||  || |||||||||||||||||||||   ||||  | |||||||||||| |||||   |  |||||||  ||||||||    
T  51421791 agagaagaccggtagatgttgtaatacgaagagtagatcaaatggaggtttgtcagatcaaaagaggtagaggaagatttagaaaaactataagagaaac 51421890  T
Q  206 cattagaaaggatttagaggtcaatga 232  Q
     ||||| || ||||||||||| |||||    
T  51421891 tattaggaaagatttagaggttaatga 51421917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 236
Target Start/End: Complemental strand, 1211617 - 1211482
Alignment:
Q  100 atgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatag 199  Q
    ||||||||||||||||  |||||   || ||||||||||||||||| |||||| ||||||   | ||||||| |||| ||||||  | || |||||  ||    
T  1211617 atgtagagagaagacctatagatattgtcgtaagaagagtagatcagatggagtagagtcggatcaaaagagatagaggaagacataggagaactataag 1211518  T
Q  200 agaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    | |||  ||||||||  | ||||||||||||||||||    
T  1211517 ataaattattagaaa-aaattagaggtcaatgagttg 1211482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 20605251 - 20605307
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggag 155  Q
    ||||||||||||||| | |||||| | |||||||| |||||| ||||| ||||||||    
T  20605251 catgtagagagaagagctgtagattctgtggtaaggagagtatatcaagtggaggag 20605307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 35690357 - 35690461
Alignment:
Q  131 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaat 230  Q
    ||||||||| ||| | |||||||| |||||  | |||||||||||| ||||||| |  |||||||  |||||||| ||||  ||  |||||||||| |||    
T  35690357 aagaagagtggattagatggaggaaagtcagatcaaaagaggtagaggaagacctagaaaaactataagagaaactattacgaaaaatttagaggttaat 35690456  T
Q  231 gagtt 235  Q
    |||||    
T  35690457 gagtt 35690461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 11523951 - 11523814
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  11523951 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 11523852  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11523851 gagaaaccattagaaaggatttagaggtcaatgagttg 11523814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 12491366 - 12491229
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||| ||    
T  12491366 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatgaaggagagtcaagttaaaagaggtagatgaagacctatgaaaactatta 12491267  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12491266 gagaaaccattagaaaggatttagaggtcaatgagttg 12491229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 36545203 - 36545340
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||| | |||||||| ||    
T  36545203 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggatagtcaagttaaaagacgtagaggaagacctaggaaaactatta 36545302  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36545303 gagaaaccattagaaaggatttagaggtcaatgagttg 36545340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 36565469 - 36565332
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  36565469 catgtagagagaatacccgtagatgccgtggtaagaagggtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 36565370  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36565369 gagaaaccattagaaaggatttagaggtcaatgagttg 36565332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 40813378 - 40813515
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||    
T  40813378 catgtagagagaagatctgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaagaaaactatta 40813477  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||||||| |||||||    
T  40813478 gagaaaccattagaaaggatttagaggtcagtgagttg 40813515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 42854232 - 42854095
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| | |     
T  42854232 catgtagagagaagacccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattc 42854133  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| |||||||||||||||||||||    
T  42854132 gagaaaccattagaaaagatttagaggtcaatgagttg 42854095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 36395177 - 36395041
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||| | |||||||| |     
T  36395177 catgtagagagaagacctgtagatgccgtggtaagaagagtagatcaaatggaggaaagtcaagttaaaagaggtataggaagacctaggaaaactattt 36395078  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    |||||||| ||||||||||||||||||||||||||||    
T  36395077 gagaaaccgttagaaaggatttagaggtcaatgagtt 36395041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 21121200 - 21121337
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | ||||||||||||||| | ||||| |||||| ||| ||    
T  21121200 catgtagagagaagacccgtagatgccgtcgtaagaagagtagatcaaatggacgagagttaggttaaaagaggtagagggagacctaagaaatctatta 21121299  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  21121300 gagaaaccattagaaaggatttagaagtcaatgagttg 21121337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 39946911 - 39947048
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||| || |||| |  ||||||| ||    
T  39946911 catgtagaaagaagacctgtagatgccgtcgtaagaagagtagatcaaatggaggagactcaagttagaagaggtagaggacgacctagaaaaactatta 39947010  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| |||||||||||||||||||||    
T  39947011 gagaaaccattagaaaagatttagaggtcaatgagttg 39947048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 2796625 - 2796744
Alignment:
Q  117 gtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaagg 216  Q
    ||||||||| | |||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  2796625 gtagatgccattgtaagaagagtaaatcaaatggaggagagtcatgttaaaagaggtagaggaagacctaagaaaactattagagaaaccattagaaagg 2796724  T
Q  217 atttagaggtcaatgagttg 236  Q
    |||||||||||||| |||||    
T  2796725 atttagaggtcaattagttg 2796744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 119 - 236
Target Start/End: Complemental strand, 42469935 - 42469818
Alignment:
Q  119 agatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggat 218  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| | | |||||||||||||||| |||    
T  42469935 agatgccgttgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagat 42469836  T
Q  219 ttagaggtcaatgagttg 236  Q
    ||||||||||||||||||    
T  42469835 ttagaggtcaatgagttg 42469818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 106 - 236
Target Start/End: Original strand, 37077812 - 37077942
Alignment:
Q  106 agagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaac 205  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||||||||||||  || |||| ||||||||||||||| | ||||| ||  ||||||||    
T  37077812 agagaggacccatagatgccgtcgtaagaagagtagatcaaatggaggagagtcgggtcaaaataggtagatgaagacctaggaaaattataagagaaac 37077911  T
Q  206 cattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||||||||    
T  37077912 cattagaaaggatttagaggtcaatgagttg 37077942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 18125227 - 18125363
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||  ||| ||||||||||| | ||||| |  ||||||| ||    
T  18125227 catgtagagagaagacccgtagatgccgtcgtaagaatagtagatcaaatggaggagagtcgggtt-aaagaggtagagggagacctagaaaaactatta 18125325  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| |||||| | ||||||||||||    
T  18125326 gagaaaccattagaaaagatttaaaagtcaatgagttg 18125363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 236
Target Start/End: Complemental strand, 26905133 - 26904997
Alignment:
Q  100 atgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatag 199  Q
    |||||||||||| || | || ||||||| ||||||||||||||||||||||| ||||||||  | |||||||||||| | ||||| | |||||||| |||    
T  26905133 atgtagagagaaaactcatacatgccgttgtaagaagagtagatcaaatggaagagagtcagataaaaagaggtagagggagacctaggaaaactattag 26905034  T
Q  200 agaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  26905033 agaaaccattagaaaagatttagaggtcaataagttg 26904997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 8932756 - 8932894
Alignment:
Q  99 catgtagagagaagacccgt-agatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaat 197  Q
    |||||||| |||||| |||| | ||||| | |||||||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||||||| | |    
T  8932756 catgtagaaagaagatccgttaaatgccattgtaagaagagtaaatcaaatggaagagagtcaagttaaaagaggtagaggaagacctaagaaaaccatt 8932855  T
Q  198 agagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
     |||||||||||||||| |||||| |||| |||||||||    
T  8932856 cgagaaaccattagaaaagatttaaaggttaatgagttg 8932894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 2027631 - 2027720
Alignment:
Q  146 aatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    ||||||||||||||| ||||||||||||||| ||||||| | |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  2027631 aatggaggagagtcaggttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaatgatttagaggtcaatgagtt 2027720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 97 - 193
Target Start/End: Original strand, 12025841 - 12025937
Alignment:
Q  97 atcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaac 193  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||| ||||||||    
T  12025841 atcatttagagagaagatccgtagatgccgttgtaagaagagtagatcaaatagagaagagtcaggttaaaagaggtaaatgaagacctaagaaaac 12025937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 25473533 - 25473495
Alignment:
Q  197 tagagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25473533 tagagaaaccattagaaaggatttagaggtcaatgagtt 25473495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 43904893 - 43904808
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagacc 184  Q
    |||||||||||||||||  ||||||  || ||||||||| ||||||| |||||||| |||||| ||| |||||||| | |||||||    
T  43904893 catgtagagagaagacctatagatgttgtagtaagaagaatagatcagatggaggatagtcaaattacaagaggtacaggaagacc 43904808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 14742234 - 14742170
Alignment:
Q  172 gtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||| ||||||| |||||||| | | |||||||||||||||| |||||||| ||||||||||||    
T  14742234 gtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaagtcaatgagttg 14742170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 25288917 - 25288955
Alignment:
Q  198 agagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  25288917 agagaaacctttagaaaggatttagaggtcaatgagttg 25288955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 25300252 - 25300290
Alignment:
Q  198 agagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  25300252 agagaaacctttagaaaggatttagaggtcaatgagttg 25300290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 29520704 - 29520840
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||  ||||||   || ||||| ||||||||||| |||||||| |||||| | | |||||||||| |||| || |  |||||||  |    
T  29520704 catgtagagagaagacttgtagattttgtagtaaggagagtagatcagatggaggatagtcaaatcacaagaggtagaggaag-cctagaaaaactataa 29520802  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||  |||| || ||||||||| | |||||||||    
T  29520803 gagaaactgttaggaacgatttagagattaatgagttg 29520840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 32043644 - 32043781
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| || ||||  || ||||| ||| ||||||| ||||||| | ||||| | |  ||||||||  ||||||| || ||||||| ||    
T  32043644 catgtagagagaagacctgtggatgttgtagtaaggagaatagatcagatggaggggtgtcaaatcactagaggtaggggaagacctaaaaaaactatta 32043743  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| || |  |||||| || || |||||||||||    
T  32043744 gagaaactatcaagaaggatctaaagatcaatgagttg 32043781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 6510656 - 6510614
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtag 141  Q
    ||||||||||||||| | ||||||||||| |||||||||||||    
T  6510656 catgtagagagaagatctgtagatgccgtcgtaagaagagtag 6510614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 25439478 - 25439516
Alignment:
Q  198 agagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  25439478 agagaaaccattcgaaaggatttagagatcaatgagttg 25439516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 5266016 - 5266120
Alignment:
Q  131 aagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaat 230  Q
    |||||||| | |||||| |||||||||| |||| | ||||||||||  |||||| |  |||||||  | ||||| ||||| || |||||| |||||||||    
T  5266016 aagaagagcaaatcaaacggaggagagt-aagtcagaagaggtagagaaagacctagaaaaactatcatagaaatcattataatggatttggaggtcaat 5266114  T
Q  231 gagttg 236  Q
    ||||||    
T  5266115 gagttg 5266120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 211
Target Start/End: Original strand, 45419291 - 45419401
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||| |||||| ||||| ||  | ||| ||||||||||||| ||||||||||||||  |   |||||||||| ||||||| |  |||||||  |    
T  45419291 catgtagagataagacctgtagaggc--tagtatgaagagtagatcagatggaggagagtcagatctgaagaggtagaggaagacctagaaaaactataa 45419388  T
Q  199 gagaaaccattag 211  Q
    ||||||| |||||    
T  45419389 gagaaactattag 45419401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 9905058 - 9904986
Alignment:
Q  151 aggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttaga 223  Q
    ||||||||||| | |||||||||||||||||||| |  |||||||  |||||||| ||||  || ||||||||    
T  9905058 aggagagtcaaatcaaaagaggtagatgaagacctagaaaaactacaagagaaactattaataaagatttaga 9904986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 18752104 - 18751996
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||| || || |||||||||| || | |||||| |||||||||||  | ||| |  |||||||||||||| ||| ||| || ||||| | ||    
T  18752104 catgtagagagaggatccatagatgccgttgttaaaagagtggatcaaatggaaaatagttagattaaaagaggtagaggaatacctaaaaaaaccatta 18752005  T
Q  199 gagaaacca 207  Q
    | |||||||    
T  18752004 gcgaaacca 18751996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Complemental strand, 30456575 - 30456547
Alignment:
Q  51 agcagagatgaggatgttgcgttggatgt 79  Q
    |||||||||||||||||||||||||||||    
T  30456575 agcagagatgaggatgttgcgttggatgt 30456547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 4496438 - 4496575
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  4496438 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 4496537  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4496538 gagaaaccattagaaaggatttagaggtcaatgagttg 4496575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 1287807 - 1287670
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  1287807 catgtagagagaagacacgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 1287708  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1287707 gagaaaccattagaaaggatttagaggtcaatgagttg 1287670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 12492612 - 12492475
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  12492612 catgtagagagaagacccgtagatgccgtgttaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 12492513  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12492512 gagaaaccattagaaaggatttagaggtcaatgagttg 12492475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 20456827 - 20456964
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  20456827 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctacgaaaactatta 20456926  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||||||||| |||||    
T  20456927 gagaaaccattagaaaggatttagaggtcaataagttg 20456964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 24178564 - 24178701
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  24178564 catgtggagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 24178663  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||| |||||||||||    
T  24178664 gagaaaccattagaaaggatttagagttcaatgagttg 24178701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 38685021 - 38685158
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | |||||||| ||    
T  38685021 catgtagagagaagacccgtagatgccgtcgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaggaaaactatta 38685120  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38685121 gagaaaccattagaaaggatttagaggtcaatgagttg 38685158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 2075702 - 2075564
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | || ||||| ||    
T  2075702 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggataactatta 2075603  T
Q  199 gagaaaccattag-aaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  2075602 gagaaaccattagaaaaggatttagaggtcaatgagttg 2075564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 2915719 - 2915586
Alignment:
Q  103 tagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagaga 202  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | || ||||| ||||||    
T  2915719 tagagagaagacccgtagatgccttggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggataactattagaga 2915620  T
Q  203 aaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||    
T  2915619 aaccattagaaaggatttagaggtcaatgagttg 2915586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 28977087 - 28976950
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  28977087 catgtagagagaagacccgtatatgccgtggtaagaagggtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 28976988  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||| |||||||||||||||||||||||||    
T  28976987 gagaaaccattataaaggatttagaggtcaatgagttg 28976950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 10639358 - 10639493
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||||| | |||||||| ||    
T  10639358 catgtagagagaagacctgtagatgccatggtaagaagagtagaacaaatggaggag--tcaagttaaaagaggtagaggaagacctaggaaaactatta 10639455  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10639456 gagaaaccattagaaaggatttagaggtcaatgagttg 10639493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 14665768 - 14665905
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||| | ||||| | |||||||| ||    
T  14665768 catgtagagagaagacccgtagatgccgtcgtaagaagagtagatcaaatggagcagagtcaggttaaaagaggtagagggagacctaggaaaactatta 14665867  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||| ||| ||||||| ||||||||||||    
T  14665868 gagaaaccattaggaagaatttagaagtcaatgagttg 14665905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 16347606 - 16347473
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | |||||||| ||    
T  16347606 catgtagagagaagacccgtagatgcctttgcaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaggaaaactatta 16347507  T
Q  199 gagaaaccattagaaaggatttagaggtcaatga 232  Q
     ||||||||||||||| |||||||||||||||||    
T  16347506 aagaaaccattagaaaagatttagaggtcaatga 16347473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 1275318 - 1275455
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||| |  ||||||| ||    
T  1275318 catgtagagagaagatccgtaaatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaacaggggtagaggaagacctagaaaaactatta 1275417  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||| ||||||||||||||| ||| |||||    
T  1275418 gagaaaccattataaaggatttagaggttaatcagttg 1275455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 3301898 - 3302035
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| || |||||| |  ||||||||||||||||||| ||||||||||||||| ||||||| |||||||| | ||    
T  3301898 catgtagagagaagacccgtagatgccgttgttagaagaatgaatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccatta 3301997  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  3301998 gagaaaccattataaaagatttagaggtcaatgagttg 3302035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 236
Target Start/End: Complemental strand, 13561579 - 13561477
Alignment:
Q  134 aagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgag 233  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| | | |||||||||||||||| ||||||||||||||||||    
T  13561579 aagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgag 13561480  T
Q  234 ttg 236  Q
    |||    
T  13561479 ttg 13561477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 34273118 - 34273204
Alignment:
Q  150 gaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34273118 gaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttg 34273204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 14911264 - 14911363
Alignment:
Q  137 agtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||| |||||||||  ||||||||||||||| ||||||| |||||||| | | |||||||||||||||| ||||||||||| |||||||||    
T  14911264 agtagatcaaatgaaggagagtcgggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggttaatgagttg 14911363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 38501646 - 38501509
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||| |||||||||  ||||||||||| ||||||||||||||| | |||||||||||||   | ||||||| | |||||||||| | || |||||  |    
T  38501646 catgtaaagagaagacttgtagatgccgtcgtaagaagagtagattagatggaggagagtcggatcaaaagagatggatgaagacctaggagaactataa 38501547  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
     |||||| ||||||||| |||||||||||||| |||||    
T  38501546 aagaaactattagaaagtatttagaggtcaataagttg 38501509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 29816515 - 29816573
Alignment:
Q  178 gaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29816515 gaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttg 29816573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 16914021 - 16913974
Alignment:
Q  189 aaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16914021 aaaactattagagaaaccattagaaaggatttagaggtcaatgagttg 16913974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 26884916 - 26884786
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||| ||||   |||||||  || ||||||||||||||||| |||||||||||||  || |||||||||||| || || | | ||||||||  |    
T  26884916 catgtagagataagatttgtagatgttgtcgtaagaagagtagatcagatggaggagagtcgggtcaaaagaggtagaggatgagctaggaaaacta--a 26884819  T
Q  199 gagaaaccattagaaaggatttagaggtcaatg 231  Q
    || |||| ||||| || ||||||||||| ||||    
T  26884818 gaaaaactattaggaaagatttagaggttaatg 26884786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 17340630 - 17340580
Alignment:
Q  133 gaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagac 183  Q
    ||||||||||||| |||||||||||||| || ||||  |||||||||||||    
T  17340630 gaagagtagatcagatggaggagagtcaggtcaaaaagggtagatgaagac 17340580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 28276391 - 28276429
Alignment:
Q  198 agagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  28276391 agagaaaccattagaaagaatttagaggtcaataagttg 28276429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 36215555 - 36215629
Alignment:
Q  102 gtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtaga 176  Q
    ||||| |||| || |||| ||| ||| | ||||||||||||||  |||||||||||||| || ||||||||||||    
T  36215555 gtagaaagaaaactcgtatatgtcgttgaaagaagagtagatcggatggaggagagtcaggtcaaaagaggtaga 36215629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 81
Target Start/End: Original strand, 4505018 - 4505047
Alignment:
Q  52 gcagagatgaggatgttgcgttggatgttg 81  Q
    ||||||||||||||||||||||||||||||    
T  4505018 gcagagatgaggatgttgcgttggatgttg 4505047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 43475299 - 43475355
Alignment:
Q  104 agagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtca 160  Q
    |||||||||||| |||||||  || ||||| ||||||||||| |||||||| |||||    
T  43475299 agagagaagacctgtagatgttgtagtaaggagagtagatcagatggaggatagtca 43475355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 1210799 - 1210936
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  1210799 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 1210898  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1210899 gagaaaccattagaaaggatttagaggtcaatgagttg 1210936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 98 - 236
Target Start/End: Complemental strand, 30202359 - 30202221
Alignment:
Q  98 tcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaat 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | |||||||| |    
T  30202359 tcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggacgagagtcaagttaaaagaggtagaggaagacctaggaaaactatt 30202260  T
Q  198 agagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30202259 agagaaaccattagaaaggatttagaggtcaatgagttg 30202221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 98 - 236
Target Start/End: Complemental strand, 49347622 - 49347484
Alignment:
Q  98 tcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaat 197  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |    
T  49347622 tcatgcagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatt 49347523  T
Q  198 agagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49347522 agagaaaccattagaaaggatttagaggtcaatgagttg 49347484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 8671972 - 8672109
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  8671972 catgtagagagaagatccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 8672071  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8672072 gagaaaccattagaaaggatttagaggtcaatgagttg 8672109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 34792577 - 34792440
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  34792577 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 34792478  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  34792477 gagaaaccattagaaaggatttaaaggtcaatgagttg 34792440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 4029176 - 4029313
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  4029176 catgtagagagaagacccgtagatgccgtggtaagaagaatagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 4029275  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  4029276 gagaaaccattagaaaggatttaaaggtcaatgagttg 4029313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 9592788 - 9592924
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| ||| ||    
T  9592788 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaacctatta 9592887  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    |||||||||||||||| ||||||||||||||||||||    
T  9592888 gagaaaccattagaaatgatttagaggtcaatgagtt 9592924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 22090150 - 22090287
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||| | |||||||| ||    
T  22090150 catgtagggagaagacccgtagatgccgtggtaagaaaagtagatcaaatggaggagagtcaagttaaaaggggtagaggaagacctaggaaaactatta 22090249  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22090250 gagaaaccattagaaaggatttagaggtcaatgagttg 22090287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 51602110 - 51602247
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  51602110 catgtagagagaagacccgtagatgtcgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 51602209  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    || |||||||||||| ||||||||||||||||||||||    
T  51602210 gaaaaaccattagaagggatttagaggtcaatgagttg 51602247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 32231182 - 32231045
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  32231182 catgtagagagaagacttgtagatgccgtcataagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 32231083  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32231082 gagaaaccattagaaaggatttagaggtcaatgagttg 32231045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 51440993 - 51440856
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||| | |||||||| ||    
T  51440993 catgtagagagaagacccggagatgccgtggtaagaagagtagagcaaatggaggagagtcaagttaaaggaggtagaggaagacctaggaaaactatta 51440894  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  51440893 gagaaaccattagaaaggatttataggtcaatgagttg 51440856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 25979459 - 25979322
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||| || ||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||| | |||||||| ||    
T  25979459 catgtagagagaagacccgtagatgctgttgtaaggagagtagatcgaatggaggagagtcaggttaaaagaggtagaggaagacccatgaaaactatta 25979360  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25979359 gagaaaccattagaaaggatttagaggtcaatgagttg 25979322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 696323 - 696459
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| |||||||| | |     
T  696323 catgtagagagaagacccgtagatgccgttgtaagaagagtagatcatatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattc 696422  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    |||||||||||||||| ||||||||||||||||||||    
T  696423 gagaaaccattagaaaagatttagaggtcaatgagtt 696459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 4001683 - 4001546
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| | |     
T  4001683 catgtagagaggagacccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattc 4001584  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  4001583 gagaaaccattaaaaaagatttagaggtcaatgagttg 4001546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 43240607 - 43240470
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| | |||||||| ||    
T  43240607 catgtagagagaagacccgtagatgttgtggtaagaagagtagatcaaatggaggagagttaagttaaaaaaggtagaggaagacctaggaaaactatta 43240508  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| |||||| | ||||||||||||    
T  43240507 gagaaaccattagaaatgatttatatgtcaatgagttg 43240470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 8391826 - 8391963
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||| |||||| ||||||||| |||||||| | |     
T  8391826 catgtagagaggagacccgtagatgccgttgtaagaagagtagatcaaatgaaggagagtcatgttaaaggaggtatatgaagacctaagaaaaccattc 8391925  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||| ||||||||| ||||||||||||||| |||||    
T  8391926 gagaaatcattagaaaagatttagaggtcaataagttg 8391963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 38807899 - 38807762
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||| ||||||||||| |||||||||| |||||||||||||| || ||||||||||||||  | ||||||| |||  ||||||| ||||||||||  |    
T  38807899 catgtaaagagaagacccttagatgccgtcgtaagaagagtagaccagatggaggagagtcagatcaaaagagctaggggaagacctaagaaaactataa 38807800  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  38807799 gagaaaccattagaaaggatttagaggtcaacgagttg 38807762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 39318193 - 39318320
Alignment:
Q  108 agaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaacca 207  Q
    ||||||||||||||||| || |||||||||| |||||| |||||||||||||  || |||||||||||| ||||||| | ||||||||  ||||||||||    
T  39318193 agaagacccgtagatgc-gtcgtaagaagagcagatcagatggaggagagtcgggtcaaaagaggtagaggaagacctaggaaaactataagagaaacca 39318291  T
Q  208 ttagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||||||    
T  39318292 ttagaaaggatttagaggtcaatgagttg 39318320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 37311953 - 37311846
Alignment:
Q  129 gtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtca 228  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| | |||||| | | |||||||||||||||| |||||||||||||    
T  37311953 gtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggtagacctaggaaaaccatttgagaaaccattagaaaagatttagaggtca 37311854  T
Q  229 atgagttg 236  Q
    ||||||||    
T  37311853 atgagttg 37311846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 15085988 - 15086082
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaac 193  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||  |||||||||||||| ||||||| ||||||||    
T  15085988 catgtagagagaagacccgtagatgccgttgttagaagagtagatcaaatggaggagagtcagattaaaagaggtagaggaagacctaagaaaac 15086082  T

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Target: chr1; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 32082973 - 32082879
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaac 193  Q
    |||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  32082973 catgcagagaggagacccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaac 32082879  T

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Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 52921197 - 52921267
Alignment:
Q  162 gttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatga 232  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  52921197 gttaaaagaggtagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatga 52921267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 4415455 - 4415540
Alignment:
Q  152 ggagagtcaagttaaaaga-ggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||| ||||||| | |||||| ||| ||| |||||||| | | |||||||||||||||| |||||||||||||||||||||    
T  4415455 ggagagtcaggttaaaaaaaggtagaggaaaacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagttg 4415540  T

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Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 52561817 - 52561680
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||  ||||||  |  ||| ||||||||||||| |||||||||||| |  ||| |||||||||| ||||||  |  |||||||  |    
T  52561817 catgtagagagaagaccgatagatgttgcagtacgaagagtagatcagatggaggagagttagattagaagaggtagaggaagacttagaaaaactataa 52561718  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||  |||| || ||||||||||| |||||||||    
T  52561717 gagaaactgttaggaaagatttagaggttaatgagttg 52561680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 27848033 - 27847948
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagacc 184  Q
    |||| |||||||||||| |||||||| || ||| |||||||| |||| ||||||||||||||  | | |||||||||| |||||||    
T  27848033 catgcagagagaagacctgtagatgctgtagtatgaagagtatatcagatggaggagagtcagctcagaagaggtagaggaagacc 27847948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 478750 - 478869
Alignment:
Q  117 gtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaagg 216  Q
    |||||||| || ||||||||||||||||| ||| | |||||| | || ||||||| |||| ||||||| |  ||| |||  |||||||| ||||| || |    
T  478750 gtagatgctgtcgtaagaagagtagatcagatgaaagagagttaggtcaaaagagttagaggaagacctacaaaatctataagagaaactattaggaaag 478849  T
Q  217 atttagaggtcaatgagttg 236  Q
     ||||||||| |||||||||    
T  478850 ttttagaggttaatgagttg 478869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 32079305 - 32079266
Alignment:
Q  197 tagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  32079305 tagagaaaccatcagaaaggatttagaggtcaatgagttg 32079266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 32404753 - 32404618
Alignment:
Q  100 atgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatag 199  Q
    |||||||||||||||| |||||| |  | ||||| ||||||||  | |||||||| |||||  | | |||||||||| ||||||| |  |||||||  ||    
T  32404753 atgtagagagaagacctgtagattctatagtaaggagagtagagaagatggaggatagtcatatcacaagaggtagaggaagacctacaaaaactataag 32404654  T
Q  200 agaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    |||||| ||||| || ||||||||| | ||||||||    
T  32404653 agaaactattaggaaagatttagagattaatgagtt 32404618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 9509372 - 9509494
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| ||| ||||  | |||   ||||||||||| ||||||||||||||  ||| |||||||||| ||||||| |  |||||||  |    
T  9509372 catgtagagagaagaccggtatatgctttagtacttagagtagatcagatggaggagagtcatattagaagaggtagaggaagacctagaaaaactataa 9509471  T
Q  199 gagaaaccattagaaaggattta 221  Q
    || |||| ||||| || ||||||    
T  9509472 gataaactattaggaaagattta 9509494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 235
Target Start/End: Complemental strand, 9599587 - 9599486
Alignment:
Q  134 aagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgag 233  Q
    |||||||||||| ||||||||||||||  | | |||||||||| ||||||| |  |||||||  |||||||| ||||| ||  |||||||| | ||||||    
T  9599587 aagagtagatcagatggaggagagtcagatcataagaggtagaggaagacctagaaaaactacaagagaaactattaggaaatatttagagtttaatgag 9599488  T
Q  234 tt 235  Q
    ||    
T  9599487 tt 9599486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 226
Target Start/End: Complemental strand, 34827332 - 34827205
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||| ||||||||||  |||||||  | ||||||| ||||||| | |||||||||||| | |||| || |  || | ||||||| |  |||||||  |    
T  34827332 catgtaaagagaagaccgatagatgctctagtaagaaaagtagattagatggaggagagtaaggttagaaaaaataaaggaagacctagaaaaactataa 34827233  T
Q  199 gagaaaccattagaaaggatttagaggt 226  Q
    ||||||| |||||||| |||||||||||    
T  34827232 gagaaactattagaaaagatttagaggt 34827205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 37463086 - 37462967
Alignment:
Q  117 gtagatgccgtggtaagaagagtagatcaaatggaggagagtc-aagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaag 215  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||  |   |||||||||||| ||  ||| |  |||||||  |||||||| || || ||     
T  37463086 gtagatgccgtagtacgaagagtagatcagatggaggagagtcggatcaaaaagaggtagaggattacctagaaaaactataagagaaacgatcaggaat 37462987  T
Q  216 gatttagaggtcaatgagtt 235  Q
    ||||||||||| ||||||||    
T  37462986 gatttagaggttaatgagtt 37462967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 15086079 - 15086113
Alignment:
Q  202 aaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||| |||||||||||||||||||||||    
T  15086079 aaaccattagataggatttagaggtcaatgagttg 15086113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 31979791 - 31979745
Alignment:
Q  138 gtagatcaaatggaggagagtcaagttaaaagaggtagatgaagacc 184  Q
    ||||||||||| ||||| ||||| |||| ||||||||||||||||||    
T  31979791 gtagatcaaatagaggatagtcaggttacaagaggtagatgaagacc 31979745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 39140574 - 39140651
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtaga 176  Q
    |||||||||||||||||  || |||  || ||| ||||||||||||| ||||| ||||||||  ||| ||||||||||    
T  39140574 catgtagagagaagaccgatacatgttgtagtacgaagagtagatcagatggatgagagtcagattagaagaggtaga 39140651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 224
Target Start/End: Complemental strand, 48431634 - 48431509
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||  ||||||   || ||||  ||||| ||||| |||||||| ||||   ||| |||||||||| ||||||| || |||||||  |    
T  48431634 catgtagagagaagacttgtagattttgtagtaaagagagttgatcagatggaggatagtcggattacaagaggtagaggaagacccaaaaaaactataa 48431535  T
Q  199 gagaaaccattagaaaggatttagag 224  Q
    ||||||| ||||  || |||||||||    
T  48431534 gagaaactattaagaaagatttagag 48431509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 26016355 - 26016383
Alignment:
Q  51 agcagagatgaggatgttgcgttggatgt 79  Q
    |||||||||||||||||||||||||||||    
T  26016355 agcagagatgaggatgttgcgttggatgt 26016383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 2e-60; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 24583860 - 24583723
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  24583860 catgtagagagaagacccgtagatgctgtcgtaagaagagtagatcaaatggaggagagtcaagttaaaagagatagatgaagacaaaaaaaaactaata 24583761  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24583760 gagaaaccattagaaaggatttagaggtcaatgagttg 24583723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 36183505 - 36183642
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  36183505 catgtagagagaagacccgtagatgccgtggtaagaagagtagataaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 36183604  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  36183605 gagaaaccattagaaaggatttagaagtcaatgagttg 36183642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 100 - 236
Target Start/End: Complemental strand, 3243880 - 3243744
Alignment:
Q  100 atgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatag 199  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| | |||||||| |||    
T  3243880 atgtagagagaagacccgtagatgccgtggtaagaagaatagatcaaatggaggagagtcaagttaaaagaggcagaggaagacctaggaaaactattag 3243781  T
Q  200 agaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||||||||||||||    
T  3243780 agaaaccattagaaaggatttagaggtcaatgagttg 3243744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 451876 - 451739
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | |||||||| ||    
T  451876 catgtagagaaaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaaaaggtagaggaagacctaggaaaactatta 451777  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||||||| |||||||    
T  451776 gagaaaccattagaaaggatttagaggtcagtgagttg 451739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 2610642 - 2610779
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | |||||||| ||    
T  2610642 catgtagagagaagacacgtagatgtcgtggtaagaagagtagatcaaatggatgagagtcaagttaaaagaggtagaggaagacctatgaaaactatta 2610741  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2610742 gagaaaccattagaaaggatttagaggtcaatgagttg 2610779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 38452913 - 38452777
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| | |||||||| ||    
T  38452913 catgtagagagaagacccgtagatgccgtggtaagaaga-tagatcaaatggaggaaagtcaagttaaaagaggtagaggaagacctaggaaaactatta 38452815  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38452814 gagaaaccattagaaaggatttagaggtcaatgagttg 38452777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 3866126 - 3866263
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||| | |||||||| ||    
T  3866126 catgtagagagaagacccgtagatgtcgtggtaagaagagtagatcaaatggaggagagacaaattaaaagaggtagaggaaaacctaggaaaactatta 3866225  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3866226 gagaaaccattagaaaggatttagaggtcaatgagttg 3866263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 4807653 - 4807786
Alignment:
Q  103 tagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagaga 202  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  4807653 tagagagaagactcgtagatgtcgtggtaagaagagtagatcaaatgaaggagagtcaagttaaaagaggtagatgaagacctaggaaaactattagaga 4807752  T
Q  203 aaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||| ||||||||||||||||||||    
T  4807753 aaccattagaaagtatttagaggtcaatgagttg 4807786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 7326388 - 7326251
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||  | |||||||| ||    
T  7326388 catgtagagagaagacctgtagatgccgtggtaagaagagtagatcaaatgaaggagagtcaagttaaaagaggtagaggaagacataggaaaactatta 7326289  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| |||||||||||||||||||||    
T  7326288 gagaaaccattagaaatgatttagaggtcaatgagttg 7326251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 12734753 - 12734891
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaaga-ggtagatgaagaccaaagaaaactaat 197  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| | ||||| | |||||||| |    
T  12734753 catgtaaagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaggttaaaagagggtagagggagacctaggaaaactatt 12734852  T
Q  198 agagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12734853 agagaaaccattagaaaggatttagaggtcaatgagttg 12734891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 8180834 - 8180971
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  | |||||||| ||    
T  8180834 catgtagagagaagacctgtggatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagcggtagaggaagacataggaaaactatta 8180933  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    || |||||||||||||||||||||||||||||||||||    
T  8180934 gataaaccattagaaaggatttagaggtcaatgagttg 8180971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 116 - 236
Target Start/End: Original strand, 28508749 - 28508869
Alignment:
Q  116 cgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaag 215  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| | |||||||| |||||||||||||||||||    
T  28508749 cgtagatgccgtggtaataagagtagatcaaatggaggagagtcaagttaaaagatgtagaggaagacctaggaaaactattagagaaaccattagaaag 28508848  T
Q  216 gatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||    
T  28508849 gatttagaggtcaatgagttg 28508869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 38429938 - 38430075
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||||| | |     
T  38429938 catgtaaagagaagacccgtatatgccgttgtaagaagagtagatcaaatggaggagagtcaggttaaaagaagtagaggaagacctaagaaaaccattc 38430037  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| |||||||||||||||||||||    
T  38430038 gagaaaccattagaaaagatttagaggtcaatgagttg 38430075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 45367853 - 45367716
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||||||||||||||| ||||||  |||||||| | ||    
T  45367853 catgtagagagaagacccgtagatgccgttgttagaagggtagatcaaatggaggagagtctagttaaaagaggtagaggaagactcaagaaaaccatta 45367754  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  45367753 gagaaatcattagaaaggatttagaggtaaatgagttg 45367716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 11992332 - 11992200
Alignment:
Q  103 tagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagaga 202  Q
    ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||  ||||||||||||| | ||||||| |||||||| | ||| ||    
T  11992332 tagagagaagacccgtagatgccgttgttagaagagtggatcaaatggaggagagtcgggttaaaagaggtaaaggaagacctaagaaaaccattaggga 11992233  T
Q  203 aaccattagaaaggatttagaggtcaatgagtt 235  Q
    || ||||||||||||||||||||||||||||||    
T  11992232 aatcattagaaaggatttagaggtcaatgagtt 11992200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 39029638 - 39029772
Alignment:
Q  102 gtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagag 201  Q
    |||||||| ||||||||||||||||| |||||||||||||||||| ||||||| ||||| || |||||||||||| ||||||| |||||||  | | |||    
T  39029638 gtagagaggagacccgtagatgccgttgtaagaagagtagatcaattggaggaaagtcaggtaaaaagaggtagaggaagacctaagaaaaacattcgag 39029737  T
Q  202 aaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||| |||||||||||||||||||||    
T  39029738 aaaccattagaaaagatttagaggtcaatgagttg 39029772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 25834735 - 25834869
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||||||||||  |||| | ||||||||||||||| ||||||| | |||||||  ||    
T  25834735 catgtagagagaagacctgtggatgccgttgtaagaagagtagatcaaatggag--gagttaggttaaaagaggtagaggaagacctaggaaaact-tta 25834831  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
     |||||||||||||||||||||||||||||||||||||    
T  25834832 aagaaaccattagaaaggatttagaggtcaatgagttg 25834869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 41197456 - 41197318
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagtt-aaaagaggtagatgaagaccaaagaaaactaat 197  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| |||||||  |||||| |||||||| | |    
T  41197456 catgtagagagaagatccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcaggttaaaaaaaggtagagaaagacctaagaaaaccatt 41197357  T
Q  198 agagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
     |||||||||||| ||| |||||||||||||| ||||||    
T  41197356 tgagaaaccattataaaagatttagaggtcaacgagttg 41197318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 99 - 235
Target Start/End: Complemental strand, 18424605 - 18424469
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||| |||||||||||||||  ||||||||| |||||||| |||| |||||||| ||||||||||||||| ||||||  | |||||||| ||    
T  18424605 catgtagagagacgacccgtagatgccgacgtaagaagattagatcaattggatgagagtcaggttaaaagaggtagaggaagacataggaaaactatta 18424506  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    |||||||||||| ||||||||||||| ||||| ||||    
T  18424505 gagaaaccattataaaggatttagagatcaataagtt 18424469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 41763270 - 41763134
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||| |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||| | |     
T  41763270 catgcagagagaagacctgtagatgccgttgtaagaaaagtagatcaaatggaggagagtcaggttaaaaaaggtagaggaagacctaagaaaaccattc 41763171  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||  ||||| |||||||| |||||    
T  41763170 gagaaaccattagaaaaaattta-aggtcaattagttg 41763134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 23997668 - 23997762
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaac 193  Q
    |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| || ||||||| ||||||||    
T  23997668 catgtagaaagaagacccgtagatgtcgttgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtggaagaagacctaagaaaac 23997762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 6237981 - 6237844
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||| ||||||||| | | ||| ||||||||||||||||| ||||||||||| || || ||||||||||||  |||||| |  |||||||  |    
T  6237981 catgtagagagtagacccgtaaacgtcgtcgtaagaagagtagatcagatggaggagagacatgtcaaaagaggtagagtaagacctagaaaaactagaa 6237882  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    || ||||||||||||| ||||||||||||||| |||||    
T  6237881 gataaaccattagaaatgatttagaggtcaatcagttg 6237844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 35643065 - 35643139
Alignment:
Q  162 gttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||  |||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35643065 gttaaaagaggtagagaaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttg 35643139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 31959625 - 31959712
Alignment:
Q  149 ggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||| || ||||||| |||  ||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  31959625 ggaggagagtcaggtcaaaagagttaggcgaagacctaggaaaactataagagaaaccattagaaaggatttagaggtcaatgagttg 31959712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 9996765 - 9996717
Alignment:
Q  188 gaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  9996765 gaaaactataagagaaaccattagaaaggatttagaggtcaacgagttg 9996717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 12141601 - 12141683
Alignment:
Q  102 gtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagacc 184  Q
    ||||| |||||||| |||||| |  | ||||| ||||||||||| || ||||| |||||| ||| |||||||||| |||||||    
T  12141601 gtagaaagaagacctgtagattctctagtaaggagagtagatcagattgaggatagtcaaattacaagaggtagaggaagacc 12141683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 23997759 - 23997793
Alignment:
Q  202 aaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||| |||||||||||||||||||||    
T  23997759 aaaccattagaaaagatttagaggtcaatgagttg 23997793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 30743686 - 30743720
Alignment:
Q  202 aaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||| |||||||||||||||||||||    
T  30743686 aaaccattagaaatgatttagaggtcaatgagttg 30743720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 30306190 - 30306223
Alignment:
Q  203 aaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||| |||||||    
T  30306190 aaccattagaaaggatttagaggtcattgagttg 30306223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 79
Target Start/End: Complemental strand, 9647969 - 9647941
Alignment:
Q  51 agcagagatgaggatgttgcgttggatgt 79  Q
    |||||||||||||||||||||||||||||    
T  9647969 agcagagatgaggatgttgcgttggatgt 9647941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 54279077 - 54279211
Alignment:
Q  102 gtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagag 201  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||    
T  54279077 gtagagagaagacccgtagatgccgtggtaaaaagagtagatcaaatggaggagagtcaagttaaaagaggtagaagaagacctaggaaaactattagag 54279176  T
Q  202 aaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||||||||||||||    
T  54279177 aaaccattagaaaggatttagaggtcaatgagttg 54279211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 28245491 - 28245628
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||    
T  28245491 catgtagagagaaaacccgtagatgccgtggtaagaagagtatatcaaatggaggagagtcaagttaaaagaggtagatgaagacctaggaaaactatta 28245590  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  28245591 gagaaacgattagaaatgatttagaggtcaatgagttg 28245628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 52138854 - 52138991
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  52138854 catgtagagagaagacctgtagatgccgtggtaagaagaatagattaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 52138953  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52138954 gagaaaccattagaaaggatttagaggtcaatgagttg 52138991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 5168886 - 5169023
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| | ||    
T  5168886 catgtagagagaagacccgtagatgccgttgttagaagagtagatcaaatggaggagagtctagttaaaagaggtagaggaagacctaagaaaaccatta 5168985  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  5168986 gagaaaccattagaaaggatttataggtcaatgagttg 5169023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 22126 - 22263
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||||||||||| ||||||  |||||||| | ||    
T  22126 catgtagagagaagacccgtagatgccgttgtaagaagagtagattaaatggaggagagtcgggttaaaagaggtagaggaagacttaagaaaaccatta 22225  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22226 gagaaaccattagaaaggatttagaggtcaatgagttg 22263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 35033200 - 35033337
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||| | |     
T  35033200 catgtagagagaagacccgtagatgccattgtaagaagagtaaatcaaatggaggagagtcaggttaaaagaggtagaggaagacctaagaaaaccattc 35033299  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| |||||||||||||||||||||    
T  35033300 gagaaaccattagaaaagatttagaggtcaatgagttg 35033337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 47233824 - 47233691
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| || || ||||||| |||||||||| ||    
T  47233824 catgtagagagaagacccgtagatgccgttgttagaagagtagatcaaatggaggagagtcaggttaaaagatgttgaagaagacctaagaaaactatta 47233725  T
Q  199 gagaaaccattagaaaggatttagaggtcaatga 232  Q
    ||||||||||||||||||| ||||||||||||||    
T  47233724 gagaaaccattagaaaggaattagaggtcaatga 47233691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 51447938 - 51447808
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| | |||||||| ||    
T  51447938 catgtagagagaagatccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaaga-------gaagacctaggaaaactatta 51447846  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  51447845 gagaaaccattagaaaggatttagaggtcaatgagttg 51447808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 48508289 - 48508426
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||  || ||||||||||||||||| |||||||||||||| || |||||||||||| ||||||| | ||||||||  |    
T  48508289 catgtagagagaagacccgtagatgttgtcgtaagaagagtagatcagatggaggagagtcaggtcaaaagaggtagaggaagacctaggaaaactataa 48508388  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48508389 gagaaaccattagaaaggatttagaggtcaatgagttg 48508426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 99 - 228
Target Start/End: Complemental strand, 33272250 - 33272122
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||    
T  33272250 catgtagagagaagact-gtagatgccgtggtaagaagtgtatatcaaatggaggagagtcaagttaaaagaggtagaggaagacctacgaaaactatta 33272152  T
Q  199 gagaaaccattagaaaggatttagaggtca 228  Q
    |||||||||||||||| |||||||||||||    
T  33272151 gagaaaccattagaaatgatttagaggtca 33272122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 232
Target Start/End: Original strand, 25191431 - 25191564
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| |  ||||||||||||||| ||||| | |||||||  | |     
T  25191431 catgtagagagaagacccgtagataccgttgtaagaagagaagatcaaatggaggagagcccggttaaaagaggtagaggaagaactaagaaaatcattt 25191530  T
Q  199 gagaaaccattagaaaggatttagaggtcaatga 232  Q
    |||||||||||||||| |||||||||||||||||    
T  25191531 gagaaaccattagaaaagatttagaggtcaatga 25191564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 53519653 - 53519740
Alignment:
Q  106 agagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaac 193  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  53519653 agagaagaaccgtagatgccgttgtaagaagagtagatcaaatggaggagagtcatgttaaaagaggtagaggaagacctaagaaaac 53519740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 232
Target Start/End: Original strand, 38850174 - 38850308
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||| | ||||| | ||| |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| | ||||| || ||    
T  38850174 catgtagagagaagatcagtagaggtcgtcgtaagaagagtagatcgaatggaggagagtcaagttagaagaggtagaggaagacctaggaaaattatta 38850273  T
Q  199 gagaaaccattag-aaaggatttagaggtcaatga 232  Q
    || |||||||||| ||||||| |||| ||||||||    
T  38850274 gataaaccattagaaaaggatctagaagtcaatga 38850308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 219
Target Start/End: Original strand, 45728201 - 45728324
Alignment:
Q  99 catgtagagagaaga-cccgtagatgccgtggtaagaagagtagat--caaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaacta 195  Q
    ||||||||||||| | ||| |||||| ||| |||||||||||| ||  ||||||||||||||||| |||||||||| |||| ||||||| | ||||||||    
T  45728201 catgtagagagaaaaacccatagatgtcgttgtaagaagagtatatatcaaatggaggagagtcatgttaaaagagatagaggaagacctaggaaaacta 45728300  T
Q  196 atagagaaaccattagaaaggatt 219  Q
     |||||||||||||||||||||||    
T  45728301 ttagagaaaccattagaaaggatt 45728324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 12096875 - 12096796
Alignment:
Q  157 gtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||| ||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  12096875 gtcaagttaaaagaggtagaggaagacctaggaaaactattagaaaaaccattagaaaggatttagaggtcaatgagttg 12096796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 38060485 - 38060580
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaact 194  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||||| ||||||| | ||||| | |||||||    
T  38060485 catgtagagagaagacctgtagatgccgtcgtaagaagagtagattaaatggaggagagtcaggttaaaaaaggtagagggagacctaggaaaact 38060580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 43694993 - 43694867
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| ||||||| ||| ||||||||| ||||||||||| ||||      |||||||||||||||| ||| | | | |||||||| ||    
T  43694993 catgtagagagaagacctgtagatgtcgtcgtaagaagattagatcaaatgaagga------agttaaaagaggtagaggaaaatctaggaaaactatta 43694900  T
Q  199 gagaaaccattagaaaggatttagaggtcaatg 231  Q
    |||||||||||| ||| ||||||||||||||||    
T  43694899 gagaaaccattaaaaaagatttagaggtcaatg 43694867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 39235192 - 39235329
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| |||||||  || ||| ||||||||||||| |||||||| |||||  | |||||||||||| ||||||| || |||||||       
T  39235192 catgtagagagaagacctgtagatgttgtagtacgaagagtagatcagatggaggaaagtcagatcaaaagaggtagaggaagacccaaaaaaactatag 39235291  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    || |||| ||||| || |||||||| || |||||||||    
T  39235292 gataaactattaggaaagatttagaagttaatgagttg 39235329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 54425157 - 54425056
Alignment:
Q  135 agagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagt 234  Q
    ||||||||||| |||||||||| ||| || |||||||||||| ||||||| |||||| |||  ||||  ||||||| |||||||||||||||||||| ||    
T  54425157 agagtagatcagatggaggagattcaggtcaaaagaggtagaggaagacctaagaaagctataagagggaccattaaaaaggatttagaggtcaatgggt 54425058  T
Q  235 tg 236  Q
    ||    
T  54425057 tg 54425056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 19162785 - 19162678
Alignment:
Q  129 gtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtca 228  Q
    ||||||||||||||||| ||| |||||||||| || ||||||| |||| ||||||| | |||| |||  |||||||| ||||| || ||||||||| | |    
T  19162785 gtaagaagagtagatcagatgaaggagagtcaggtcaaaagagttagaggaagacctaggaaatctataagagaaactattaggaaagatttagagatta 19162686  T
Q  229 atgagttg 236  Q
    ||||||||    
T  19162685 atgagttg 19162678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 52679074 - 52678941
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||  |||||||   ||||||||| | ||||||  |||||||||||||  ||||||||| ||||| ||||||| | ||||||||  |    
T  52679074 catgtagagagaagacttgtagatgt--tggtaagaaaaatagatcggatggaggagagtcgggttaaaagatgtagaagaagacctaggaaaacta--a 52678979  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| ||||  || ||||||||||| |||||||||    
T  52678978 gagaaactattatgaaagatttagaggttaatgagttg 52678941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 48953638 - 48953533
Alignment:
Q  110 aagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccatt 209  Q
    |||||||| |||||  || ||||||||||||||||| |||||||||||||  || |||||| ||||| ||||||| | ||||||||  ||||||| ||||    
T  48953638 aagacccgcagatgttgtcgtaagaagagtagatcagatggaggagagtcgggtcaaaagaagtagaggaagacctaggaaaactataagagaaatcatt 48953539  T
Q  210 agaaag 215  Q
    | ||||    
T  48953538 aaaaag 48953533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 38430902 - 38430986
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagac 183  Q
    |||||||||||| |||| | |||||  || ||| ||||||||||||| ||||||||||||||| | |||||||||||| ||||||    
T  38430902 catgtagagagacgacctgcagatgttgtagtatgaagagtagatcagatggaggagagtcaaatcaaaagaggtagaggaagac 38430986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 52156223 - 52156175
Alignment:
Q  188 gaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||    
T  52156223 gaaaactattagagaaatcattagaaaggatttagaggtcaatgagttg 52156175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 19676308 - 19676172
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| |||||||| || |||  ||||| |||||| || |||||||||||  | |||||||||| | ||||||| |  ||||||   |    
T  19676308 catgtagagagaagacctgtagatgctgtagtacaaagagaagatcagatagaggagagtcagatcaaaagaggta-aggaagacctagaaaaactgtaa 19676210  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| ||||| ||  |||||||||| |||||||||    
T  19676209 gagaaactattaggaaaaatttagaggttaatgagttg 19676172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 3186822 - 3186958
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||   ||||||| | | ||||||| | ||||||| || ||| | ||||| || ||||||||| ||  || ||| ||||||||||  |    
T  3186822 catgtagagagaagatttgtagatgtcattgtaagaaaaatagatcagattgagaaaagtcaggtcaaaagaggtggagaaatacctaagaaaactataa 3186921  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    || ||| |||||||||| ||||| |||||||||||||    
T  3186922 gaaaaatcattagaaagaatttaaaggtcaatgagtt 3186958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 19737051 - 19737110
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagt 158  Q
    |||| |||||||||||| |||||||  || ||||||||||||||||| ||||||||||||    
T  19737051 catgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatggaggagagt 19737110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 19757954 - 19758013
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagt 158  Q
    |||| |||||||||||| |||||||  || ||||||||||||||||| ||||||||||||    
T  19757954 catgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatggaggagagt 19758013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 30294347 - 30294212
Alignment:
Q  101 tgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaataga 200  Q
    ||||||||||||||  |||||||||   |||||||||||| || | ||  |||||||||  || |||||||||||| ||||||| |  | |||||  |||    
T  30294347 tgtagagagaagacttgtagatgccaccgtaagaagagtaaattagattaaggagagtcgggtcaaaagaggtagaggaagacctagaagaactataaga 30294248  T
Q  201 gaaaccattagaaaggatttagaggtcaatgagttg 236  Q
     |||| |||| ||| |||||| ||||||||||||||    
T  30294247 taaactattaaaaaagatttataggtcaatgagttg 30294212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 38060858 - 38060905
Alignment:
Q  189 aaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||||||    
T  38060858 aaaactattagagaaaccattagaaaggttttagaagtcaatgagttg 38060905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 45289289 - 45289182
Alignment:
Q  129 gtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtca 228  Q
    ||||||||||||||||| |||||||| ||| |  ||| ||||| |||| ||||| | | ||||||||  |||||||| ||||| || ||||||||| | |    
T  45289289 gtaagaagagtagatcagatggaggatagttagattacaagagatagaggaagatctatgaaaactataagagaaactattaggaaagatttagagatta 45289190  T
Q  229 atgagttg 236  Q
    ||||||||    
T  45289189 atgagttg 45289182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 54128432 - 54128570
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||| |||||| |||||||  |  ||| | ||||||||||| |||||||  |||||  |  ||||||||||| ||||||| |  ||||||| ||    
T  54128432 catgtagagaaaagacctgtagatgatgcagtacgtagagtagatcagatggaggttagtcagatcgaaagaggtagaggaagacctagaaaaactatta 54128531  T
Q  199 -gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
     ||||||| || || || |||||||||||||||||||||    
T  54128532 agagaaactataaggaaagatttagaggtcaatgagttg 54128570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 17022820 - 17022763
Alignment:
Q  179 aagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||| | |||| ||| |||||||||||||| |||||| ||||||||||||||||||    
T  17022820 aagacctaggaaagctattagagaaaccattaaaaaggaattagaggtcaatgagttg 17022763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 39600909 - 39600772
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||| |||||||||| |||||| | || |  || ||||||||||| || ||||| |||||  ||  |||||||||| ||||||| |  |||||||  |    
T  39600909 catgtaaagagaagacctgtagattctgtagcgaggagagtagatcagatcgaggatagtcagattgcaagaggtagaggaagacctagaaaaactataa 39600810  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| ||||  || ||||||||||| |||||||||    
T  39600809 gagaaactattaagaaagatttagaggttaatgagttg 39600772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 53262295 - 53262332
Alignment:
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||  |||||||||||||||||||||    
T  53262295 gagaaaccattagaagagatttagaggtcaatgagttg 53262332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 41842738 - 41842678
Alignment:
Q  100 atgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtca 160  Q
    |||||||||||||| | |||||| | || ||||  |||||||||||||||||||| |||||    
T  41842738 atgtagagagaagagcggtagattctgtagtaatgagagtagatcaaatggaggatagtca 41842678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 54422966 - 54422934
Alignment:
Q  204 accattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| |||||||||||||||||||||||||    
T  54422966 accattaaaaaggatttagaggtcaatgagttg 54422934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 31522 - 31659
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | |||||||| ||    
T  31522 catgtagagagaagacccgtagatgccatggtaagaagagtagatcaaatggaggagagtcaagttaaaagatgtagaggaagacccaggaaaactatta 31621  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31622 gagaaaccattagaaaggatttagaggtcaatgagttg 31659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 1176 - 1039
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| | |||||||| ||    
T  1176 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagaagagtcaaattaaaagaggtagaggaagacctaggaaaactatta 1077  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  1076 gagaaaccattaaaaaagatttagaggtcaatgagttg 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 9e-51; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 28085430 - 28085567
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||| ||   ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | |||||||| ||    
T  28085430 catgtagagagaagacccgtaaataaagtggtaagaagagtagatcaaatggagtagagtcaagttaaaagaggtagaggaagacctaggaaaactatta 28085529  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28085530 gagaaaccattagaaaggatttagaggtcaatgagttg 28085567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 30031310 - 30031447
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| | |||||||| ||    
T  30031310 catgtagagagaagacccatagatgccgtcgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagagggagacctaggaaaactatta 30031409  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  30031410 gagaaacaattagaaaggatttagaggtcaatgagttg 30031447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 35043669 - 35043532
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||| | ||    
T  35043669 catgtagagagaatacccgtagatgccgttgtaagaaaagtagatcaaatggacgagagtcaggttaaaagaagtagatgaagacctaagaaaaccatta 35043570  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  35043569 gagaaaccattagaaaggatttagaggtcaatgtgttg 35043532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 7133800 - 7133923
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |  ||||||| ||    
T  7133800 catgtagagagaagacccgaagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctagaaaaactatta 7133899  T
Q  199 gagaaaccattagaaaggatttag 222  Q
    |||||||||||||||| |||||||    
T  7133900 gagaaaccattagaaatgatttag 7133923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 99 - 222
Target Start/End: Original strand, 7136723 - 7136846
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |  ||||||| ||    
T  7136723 catgtagagagaagacccgaagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctagaaaaactatta 7136822  T
Q  199 gagaaaccattagaaaggatttag 222  Q
    |||||||||||||||| |||||||    
T  7136823 gagaaaccattagaaatgatttag 7136846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 98 - 236
Target Start/End: Original strand, 32755974 - 32756112
Alignment:
Q  98 tcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaat 197  Q
    |||||||||| ||||||||| ||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| |    
T  32755974 tcatgtagagggaagacccgaagatgtcgtaataagaagagtagatcaaatggaggagagtcaagttaaaagaggtagagaaagacctaggaaaactatt 32756073  T
Q  198 agagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  32756074 agagaaaccattagaaaagatttagaggtcaatgagttg 32756112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 99 - 233
Target Start/End: Complemental strand, 5258376 - 5258242
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||  |||||| |||||||| | |     
T  5258376 catgtagagagaagacccgtagattccgttgtaagaagagtagatcaaatggaggagagtcatgttaaaagaggtagagaaagacctaagaaaaccattc 5258277  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgag 233  Q
    |||||| ||||||| | ||||||||||||||||||    
T  5258276 gagaaatcattagacaagatttagaggtcaatgag 5258242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 99 - 233
Target Start/End: Complemental strand, 21352065 - 21351931
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| || |||||| | || |||||| |||| ||||||||| ||||||| ||||||||||||||| ||||||| |||||||| ||||    
T  21352065 catgtagagagaagacctgtcgatgccattgttagaagaatagaacaaatggagaagagtcaggttaaaagaggtagaggaagacctaagaaaaccaata 21351966  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgag 233  Q
    |||||||||||||||| ||||||||||||||||||    
T  21351965 gagaaaccattagaaaagatttagaggtcaatgag 21351931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 12890643 - 12890765
Alignment:
Q  113 acccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattaga 212  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| | || |||||||||||||||||||| | ||||||||  |||||||||||||||    
T  12890643 acccatagatgccgtcgtaagaagagtagatcagatggaggagagtaaggtcaaaagaggtagatgaagacctaggaaaactataagagaaaccattaga 12890742  T
Q  213 aaggatttagaggtcaatgagtt 235  Q
    ||||||||||| |||||||||||    
T  12890743 aaggatttagacgtcaatgagtt 12890765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 5631876 - 5632013
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||  |||||||||  | | ||||||  |||||||| | |     
T  5631876 catgtagagagaagacccgtagatgccttcgtaagaatagtagatcaaatggaggagagtcagattaaaagagacaaaggaagacttaagaaaaccattc 5631975  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||| |||||||||||||||||||||    
T  5631976 gagaaaccattagaaaagatttagaggtcaatgagttg 5632013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 608211 - 608352
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagacc----aaagaaaact 194  Q
    ||||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||     |||||||||    
T  608211 catgtagagagaagacctgtagatgcctttgtaagaagagtggatcaaatggaggagagtcagattaaaagaggttgatgaagacctaattaagaaaact 608310  T
Q  195 aatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    | | |||||||||||||||| ||||||||| |||||||||||    
T  608311 attcgagaaaccattagaaaagatttagagttcaatgagttg 608352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 20427862 - 20427728
Alignment:
Q  101 tgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaataga 200  Q
    |||| |||||||||||||||||||||| |||||||||||| ||||||| |||| |||||| |||| ||||||| || ||||||| |||||||||| ||||    
T  20427862 tgtatagagaagacccgtagatgccgttgtaagaagagtaaatcaaatagaggggagtcaggttacaagaggttgaggaagacctaagaaaactattaga 20427763  T
Q  201 gaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||  |||||||||| |||||||||    
T  20427762 gaaaccattagaaa-aatttagaggttaatgagttg 20427728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 5080905 - 5081031
Alignment:
Q  110 aagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccatt 209  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||||  |||||||||| |||||||||||| | |||||||| |||||||| ||||    
T  5080905 aagacccgtagatgctgtcgtaagaagagtaaatcaaatggaggagagtctcgttaaaagagatagatgaagacctaggaaaactattagagaaatcatt 5081004  T
Q  210 agaaaggatttagaggtcaatgagttg 236  Q
      |||  ||||||||||||||||||||    
T  5081005 caaaattatttagaggtcaatgagttg 5081031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 10100087 - 10099991
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaacta 195  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||| | ||||||||    
T  10100087 catgtagagagaagactcgtagatgccgttgtaagaagagtagatcaaatgaaggagagtcagtttaaaagaggtagaggaagacctaggaaaacta 10099991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 236
Target Start/End: Original strand, 9706826 - 9706961
Alignment:
Q  101 tgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaataga 200  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||||||| ||||||| |||||||||||||   ||||  | ||| |||| | ||||    
T  9706826 tgtagagagaagacccatagaagccgttgttagaagagtagatcaaatggagaagagtcaggttaaaagaggtacgggaagggctaagtaaaccattaga 9706925  T
Q  201 gaaaccattagaaaggatttagaggtcaatgagttg 236  Q
     ||||| |||| |||||||||||||| |||||||||    
T  9706926 taaaccgttaggaaggatttagaggttaatgagttg 9706961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 33497016 - 33497150
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||| ||| | || || |||||||||| |||||||||| |||||  ||||||||||||||||||| | ||| | |  ||||||| ||    
T  33497016 catgtagagagaagacc-gtaaacgctgtcgtaagaagagaagatcaaatgaaggag--tcaagttaaaagaggtagagggagatctagaaaaactatta 33497112  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  33497113 gagaaacctttagaaaggatttaaaggtcaatgagttg 33497150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 30679460 - 30679587
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||| |||||||||||| |||||||| | ||||          |||| ||    
T  30679460 catgtagagaggagacccgtagatgtcgtcgtaagaatagtagatcaaatggagtagagtcaagttataagaggtataggaag----------actatta 30679549  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||| |||||||||||| |||||| |||||    
T  30679550 gagaaaccattaaaaaggatttagaagtcaataagttg 30679587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 34143924 - 34143856
Alignment:
Q  168 agaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||| ||||||| | |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  34143924 agaggtagaggaagacctaggaaaactattagagaaaccattacaaaggatttagaggtcaatgagttg 34143856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 34156540 - 34156472
Alignment:
Q  168 agaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||| ||||||| | |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  34156540 agaggtagaggaagacctaggaaaactattagagaaaccattacaaaggatttagaggtcaatgagttg 34156472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 9593934 - 9593799
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||  |||||||| || ||||||||||||||||| ||||||||||||||| |   |||||||||| ||||||| |  |||| ||  |    
T  9593934 catgtagagagaagacatgtagatgctgtagtaagaagagtagatcagatggaggagagtcaaat--caagaggtagaggaagacctagaaaaattataa 9593837  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| ||||| || || |||||| | |||||||||    
T  9593836 gagaaactattaggaaagacttagagattaatgagttg 9593799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 14030861 - 14030954
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaa 192  Q
    |||||| |||||||||  ||| ||||||| |||||||||||||||||||| | ||||||||   |||||||||||||| ||||||| |||||||    
T  14030861 catgtatagagaagacatgtaaatgccgttgtaagaagagtagatcaaatagtggagagtcggattaaaagaggtagaggaagacctaagaaaa 14030954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 28027055 - 28026922
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||| || ||| |||||||| || ||| |||||||| |||| ||||||||||||||  ||| |||||||||| ||||||| || |||||||  |    
T  28027055 catgtagagataacacctgtagatgcggtagtacgaagagtatatcagatggaggagagtcagattagaagaggtagaggaagacctaaaaaaactataa 28026956  T
Q  199 gagaaaccattagaaaggatttagaggtcaatga 232  Q
    || |||||||||  || |||||| |||| |||||    
T  28026955 gaaaaaccattatgaaagatttacaggttaatga 28026922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 228
Target Start/End: Original strand, 2689694 - 2689817
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||||||||||  |||||||||||  |||||||||||||||| || ||| ||||||| || |||||||||      ||||| |  |||||||  |    
T  2689694 catgtagagagaagacatgtagatgccgtcataagaagagtagatcagatagagtagagtcatgtcaaaagaggt------agacctagaaaaactataa 2689787  T
Q  199 gagaaaccattagaaaggatttagaggtca 228  Q
    |||||||||||| ||| |||||||||||||    
T  2689788 gagaaaccattaaaaaagatttagaggtca 2689817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 236
Target Start/End: Complemental strand, 10099024 - 10098985
Alignment:
Q  197 tagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  10099024 tagagaaaccattaaaaaagatttagaggtcaatgagttg 10098985  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 6055961 - 6055863
Alignment:
Q  137 agtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagtt 235  Q
    ||||||||| ||||| ||||||||| | |||| ||||||| ||||||| |  ||||||   |||||||| ||||  || ||||||||||| ||||||||    
T  6055961 agtagatcagatggaagagagtcaaataaaaaaaggtagaggaagacctataaaaactttaagagaaactattatgaaagatttagaggttaatgagtt 6055863  T

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Target: scaffold0045 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 99 - 227
Target Start/End: Complemental strand, 86837 - 86709
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | |||||||  ||    
T  86837 catgtaaagagaagacccgtagatgccgtcgtaagaagagtagatcaaatggaggagagtcaggttaaaagaggtagatggagacctaggaaaactgtta 86738  T
Q  199 gagaaaccattagaaaggatttagaggtc 227  Q
    ||||||||| |||||||||||||||||||    
T  86737 gagaaaccactagaaaggatttagaggtc 86709  T

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Target: scaffold0113 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 11775 - 11644
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||| | |||||||| ||    
T  11775 catgtagagcgaagacccgtagatgccgtcataagaagagtagatcaaatggatgagagtcaagttagaagaggtagacgaatacctaggaaaactatta 11676  T
Q  199 gagaaaccattagaaaggatttagaggtcaat 230  Q
    |||||| | |||||||| ||||||| ||||||    
T  11675 gagaaatcgttagaaagaatttagaagtcaat 11644  T

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Target: scaffold0036 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 4499 - 4372
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||           | |||||||| ||    
T  4499 catgtagaaagaagactcgtagaagctgtggtaagaagagtagatcaaatggaggagaatcaagttaaaagaggta----------taggaaaactatta 4410  T
Q  199 gagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4409 gagaaaccattagaaaggatttagaggtcaatgagttg 4372  T

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Target: scaffold0024 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 236
Target Start/End: Original strand, 82779 - 82909
Alignment:
Q  103 tagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagaga 202  Q
    ||||||||||| || ||||||| || |||||||| ||| |||||||||||||||||   ||||| ||||||||| ||||||| | |||||||| ||||||    
T  82779 tagagagaagatccatagatgcagtcgtaagaagggtatatcaaatggaggagagtg--gttaagagaggtagaggaagacctaggaaaacta-tagaga 82875  T
Q  203 aaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||    
T  82876 aaccattagaaaggatttagaggtcaatgagttg 82909  T

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Target: scaffold0692 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 4706 - 4826
Alignment:
Q  115 ccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaa 214  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |  ||||||||||||||||||| |  | |||||| |  |||||||||||||||||    
T  4706 ccgtagatgccgtcgtaagaagagtagatcagatggaggagagtaagattaaaagaggtagatgaaggcgtaggaaaaccataagagaaaccattagaaa 4805  T
Q  215 ggatttagaggtcaatgagtt 235  Q
    ||||||||| |||||||||||    
T  4806 ggatttagacgtcaatgagtt 4826  T

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Target: scaffold0041 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 16687 - 16769
Alignment:
Q  154 agagtcaagttaaaagaggtagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||| ||||||||||||||| ||||||| |||||||| | | |||||||||||||||| |||||||||||||||||||||    
T  16687 agagtcaggttaaaagaggtagaggaagacctaagaaaaccattcgagaaaccattagaaaagatttagaggtcaatgagttg 16769  T

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Target: scaffold0157 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 25686 - 25623
Alignment:
Q  173 tagatgaagaccaaagaaaactaatagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25686 tagaggaagacctaggaaaactattagagaaaccattagaaaggatttagaggtcaatgagttg 25623  T

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Target: scaffold1318 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 483 - 522
Alignment:
Q  197 tagagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  483 tagagaaaccattagaaaggatttagaggtcaatgagttg 522  T

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Target: scaffold0199 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 14736 - 14774
Alignment:
Q  198 agagaaaccattagaaaggatttagaggtcaatgagttg 236  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  14736 agagaaaccattagaaaggatttaaaggtcaatgagttg 14774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 228
Target Start/End: Original strand, 7495 - 7623
Alignment:
Q  99 catgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggtagatgaagaccaaagaaaactaata 198  Q
    |||||||||||||| |  ||||||| | |  ||||||||||| |||| |||||||||||| |||| |||||| ||  || |||||  ||||||||||  |    
T  7495 catgtagagagaaggcatgtagatgtcttcataagaagagtatatcagatggaggagagtgaagtcaaaaga-gtgtatcaagacataagaaaactataa 7593  T
Q  199 gagaaaccattagaaaggatttagaggtca 228  Q
    || |||| |||||||| |||| ||||||||    
T  7594 gataaactattagaaaagattcagaggtca 7623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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