View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0540_low_3 (Length: 616)

Name: NF0540_low_3
Description: NF0540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0540_low_3
NF0540_low_3
[»] chr8 (15 HSPs)
chr8 (172-610)||(216356-216794)
chr8 (172-610)||(692916-693354)
chr8 (172-610)||(697125-697563)
chr8 (172-610)||(729979-730417)
chr8 (172-610)||(853874-854312)
chr8 (435-515)||(1366523-1366603)
chr8 (435-513)||(62150-62228)
chr8 (433-515)||(44752478-44752560)
chr8 (433-515)||(12351121-12351203)
chr8 (433-577)||(39254783-39254929)
chr8 (1-35)||(216932-216966)
chr8 (1-35)||(693492-693526)
chr8 (1-35)||(697701-697735)
chr8 (1-35)||(730555-730589)
chr8 (1-35)||(854450-854484)
[»] chr4 (8 HSPs)
chr4 (172-573)||(43738121-43738521)
chr4 (223-516)||(47523880-47524186)
chr4 (414-567)||(55159186-55159339)
chr4 (435-515)||(28684142-28684222)
chr4 (468-573)||(47199338-47199443)
chr4 (525-573)||(39522375-39522423)
chr4 (1-35)||(43737948-43737982)
chr4 (271-308)||(55159399-55159436)
[»] scaffold1037 (2 HSPs)
scaffold1037 (172-567)||(2550-2941)
scaffold1037 (2-35)||(2380-2413)
[»] scaffold1031 (2 HSPs)
scaffold1031 (172-567)||(2669-3060)
scaffold1031 (1-35)||(2498-2532)
[»] chr1 (6 HSPs)
chr1 (176-516)||(17494469-17494807)
chr1 (414-515)||(37874850-37874951)
chr1 (467-577)||(48870695-48870805)
chr1 (467-515)||(35616716-35616764)
chr1 (271-316)||(37874742-37874787)
chr1 (525-573)||(38930312-38930360)
[»] chr2 (3 HSPs)
chr2 (223-516)||(36475836-36476141)
chr2 (414-510)||(5277284-5277380)
chr2 (271-316)||(5277175-5277220)
[»] chr5 (3 HSPs)
chr5 (176-316)||(4554011-4554152)
chr5 (435-573)||(13654933-13655071)
chr5 (468-516)||(4553786-4553834)
[»] chr6 (3 HSPs)
chr6 (414-515)||(9574460-9574561)
chr6 (271-332)||(9574355-9574416)
chr6 (525-573)||(7532440-7532488)
[»] chr3 (1 HSPs)
chr3 (467-515)||(17227890-17227938)


Alignment Details
Target: chr8 (Bit Score: 309; Significance: 1e-174; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 172 - 610
Target Start/End: Complemental strand, 216794 - 216356
Alignment:
Q  172 cttcaaatacagtgaagcttgttgtggtggttttccatattcgaatttattttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 271  Q
    ||||||||| ||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  216794 cttcaaatatagtgaagcttgttgtggtggttttccagatccaaatttgttttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 216695  T
Q  272 gaagatgaatgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatttctttctctttattttgattcaagaa 371  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  216694 gaagatgagtgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatccctttctctttattttgattcaagaa 216595  T
Q  372 tatttttgaagggaaaaataaattgagatgaaattttcatagggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgt 471  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||       || |||||    
T  216594 tatttttgaagggaaaaataaattgagatgaaattttcattgggtgacgataataaactaagttgttaaggttagagatgatgtgaaaaaaataaagtgt 216495  T
Q  472 ggatagactatagtaacaatggtggtactactcaatctaatggttnnnnnnngactttcccatggtaaaaaagaagtatcatttcccagattaaatgaca 571  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||| |||| ||   ||||||||||  |||||||||||||||| ||    
T  216494 ggatagactatagtaacaatggtggtactactcaatctaatggttaaaaaaagacttttccatagtgggaaagaagtattctttcccagattaaatggca 216395  T
Q  572 cccaaagtcaattaaatatactctttttatattattgga 610  Q
    ||||||||||||||||||||||| |||| | ||||||||    
T  216394 cccaaagtcaattaaatatactccttttgttttattgga 216356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 172 - 610
Target Start/End: Complemental strand, 693354 - 692916
Alignment:
Q  172 cttcaaatacagtgaagcttgttgtggtggttttccatattcgaatttattttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 271  Q
    ||||||||| ||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  693354 cttcaaatatagtgaagcttgttgtggtggttttccagatccaaatttgttttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 693255  T
Q  272 gaagatgaatgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatttctttctctttattttgattcaagaa 371  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  693254 gaagatgagtgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatccctttctctttattttgattcaagaa 693155  T
Q  372 tatttttgaagggaaaaataaattgagatgaaattttcatagggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgt 471  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||       || |||||    
T  693154 tatttttgaagggaaaaataaattgagatgaaattttcattgggtgacgataataaactaagttgttaaggttagagatgatgtgaaaaaaataaagtgt 693055  T
Q  472 ggatagactatagtaacaatggtggtactactcaatctaatggttnnnnnnngactttcccatggtaaaaaagaagtatcatttcccagattaaatgaca 571  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||| |||| ||   ||||||||||  |||||||||||||||| ||    
T  693054 ggatagactatagtaacaatggtggtactactcaatctaatggttaaaaaaagacttttccatagtgggaaagaagtattctttcccagattaaatggca 692955  T
Q  572 cccaaagtcaattaaatatactctttttatattattgga 610  Q
    ||||||||||||||||||||||| |||| | ||||||||    
T  692954 cccaaagtcaattaaatatactccttttgttttattgga 692916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 172 - 610
Target Start/End: Complemental strand, 697563 - 697125
Alignment:
Q  172 cttcaaatacagtgaagcttgttgtggtggttttccatattcgaatttattttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 271  Q
    ||||||||| ||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  697563 cttcaaatatagtgaagcttgttgtggtggttttccagatccaaatttgttttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 697464  T
Q  272 gaagatgaatgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatttctttctctttattttgattcaagaa 371  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  697463 gaagatgagtgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatccctttctctttattttgattcaagaa 697364  T
Q  372 tatttttgaagggaaaaataaattgagatgaaattttcatagggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgt 471  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||       || |||||    
T  697363 tatttttgaagggaaaaataaattgagatgaaattttcattgggtgacgataataaactaagttgttaaggttagagatgatgtgaaaaaaataaagtgt 697264  T
Q  472 ggatagactatagtaacaatggtggtactactcaatctaatggttnnnnnnngactttcccatggtaaaaaagaagtatcatttcccagattaaatgaca 571  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||| |||| ||   ||||||||||  |||||||||||||||| ||    
T  697263 ggatagactatagtaacaatggtggtactactcaatctaatggttaaaaaaagacttttccatagtgggaaagaagtattctttcccagattaaatggca 697164  T
Q  572 cccaaagtcaattaaatatactctttttatattattgga 610  Q
    ||||||||||||||||||||||| |||| | ||||||||    
T  697163 cccaaagtcaattaaatatactccttttgttttattgga 697125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 172 - 610
Target Start/End: Complemental strand, 730417 - 729979
Alignment:
Q  172 cttcaaatacagtgaagcttgttgtggtggttttccatattcgaatttattttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 271  Q
    ||||||||| ||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  730417 cttcaaatatagtgaagcttgttgtggtggttttccagatccaaatttgttttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 730318  T
Q  272 gaagatgaatgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatttctttctctttattttgattcaagaa 371  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  730317 gaagatgagtgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatccctttctctttattttgattcaagaa 730218  T
Q  372 tatttttgaagggaaaaataaattgagatgaaattttcatagggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgt 471  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||       || |||||    
T  730217 tatttttgaagggaaaaataaattgagatgaaattttcattgggtgacgataataaactaagttgttaaggttagagatgatgtgaaaaaaataaagtgt 730118  T
Q  472 ggatagactatagtaacaatggtggtactactcaatctaatggttnnnnnnngactttcccatggtaaaaaagaagtatcatttcccagattaaatgaca 571  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||| |||| ||   ||||||||||  |||||||||||||||| ||    
T  730117 ggatagactatagtaacaatggtggtactactcaatctaatggttaaaaaaagacttttccatagtgggaaagaagtattctttcccagattaaatggca 730018  T
Q  572 cccaaagtcaattaaatatactctttttatattattgga 610  Q
    ||||||||||||||||||||||| |||| | ||||||||    
T  730017 cccaaagtcaattaaatatactccttttgttttattgga 729979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 172 - 610
Target Start/End: Complemental strand, 854312 - 853874
Alignment:
Q  172 cttcaaatacagtgaagcttgttgtggtggttttccatattcgaatttattttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 271  Q
    ||||||||| ||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  854312 cttcaaatatagtgaagcttgttgtggtggttttccagatccaaatttgttttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 854213  T
Q  272 gaagatgaatgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatttctttctctttattttgattcaagaa 371  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  854212 gaagatgagtgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatccctttctctttattttgattcaagaa 854113  T
Q  372 tatttttgaagggaaaaataaattgagatgaaattttcatagggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgt 471  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||       || |||||    
T  854112 tatttttgaagggaaaaataaattgagatgaaattttcattgggtgacgataataaactaagttgttaaggttagagatgatgtgaaaaaaataaagtgt 854013  T
Q  472 ggatagactatagtaacaatggtggtactactcaatctaatggttnnnnnnngactttcccatggtaaaaaagaagtatcatttcccagattaaatgaca 571  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||| |||| ||   ||||||||||  |||||||||||||||| ||    
T  854012 ggatagactatagtaacaatggtggtactactcaatctaatggttaaaaaaagacttttccatagtgggaaagaagtattctttcccagattaaatggca 853913  T
Q  572 cccaaagtcaattaaatatactctttttatattattgga 610  Q
    ||||||||||||||||||||||| |||| | ||||||||    
T  853912 cccaaagtcaattaaatatactccttttgttttattgga 853874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 435 - 515
Target Start/End: Original strand, 1366523 - 1366603
Alignment:
Q  435 tgttaaggttagagatgatgtgnnnnnnntagagtgtggatagactatagtaacaatggtggtactactcaatctaatggt 515  Q
    ||||||||||||||||||||||       || ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1366523 tgttaaggttagagatgatgtgaagaaaatatagtgtggatagactataataacaatggtggtactactcaatctaatggt 1366603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 435 - 513
Target Start/End: Original strand, 62150 - 62228
Alignment:
Q  435 tgttaaggttagagatgatgtgnnnnnnntagagtgtggatagactatagtaacaatggtggtactactcaatctaatg 513  Q
    ||||||||||||||||||||||       || ||||||||||||||||| |||||||||||||||||||||||||||||    
T  62150 tgttaaggttagagatgatgtgaagaaaatatagtgtggatagactataataacaatggtggtactactcaatctaatg 62228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 433 - 515
Target Start/End: Original strand, 44752478 - 44752560
Alignment:
Q  433 gttgttaaggttagagatgatgtgnnnnnnntagagtgtggatagactatagtaacaatggtggtactactcaatctaatggt 515  Q
    ||||||||||||||||||||||||       || ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  44752478 gttgttaaggttagagatgatgtgaagaaaatatagtgtggatagactataataacaatggtggtactactcaatttaatggt 44752560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 433 - 515
Target Start/End: Complemental strand, 12351203 - 12351121
Alignment:
Q  433 gttgttaaggttagagatgatgtgnnnnnnntagagtgtggatagactatagtaacaatggtggtactactcaatctaatggt 515  Q
    ||||||||| ||||| ||||||||       || ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12351203 gttgttaagtttagaaatgatgtgaagaaaatatagtgtggatagactataataacaatggtggtactactcaatctaatggt 12351121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 433 - 577
Target Start/End: Complemental strand, 39254929 - 39254783
Alignment:
Q  433 gttgttaaggttagagatgatgtgnnnnnnntagagtgtg--gatagactatagtaacaatggtggtactactcaatctaatggttnnnnnnngactttc 530  Q
    ||||||||||||||||||||||||       || ||||||  ||||||||||| |||||||| |||||||||||||||||||| |        |||||||    
T  39254929 gttgttaaggttagagatgatgtgaagaaaatatagtgtgtggatagactataataacaatgatggtactactcaatctaatgataaaaaaaagactttc 39254830  T
Q  531 ccatggtaaaaaagaagtatcatttcccagattaaatgacacccaaa 577  Q
    | |||||   |||||||| || ||||||| |||||||| ||||||||    
T  39254829 ctatggtgggaaagaagtctcctttcccaaattaaatgccacccaaa 39254783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 216966 - 216932
Alignment:
Q  1 cattgagatttttcaaatacataaatgtagatcat 35  Q
    |||||||||||||||||||||||||||||||||||    
T  216966 cattgagatttttcaaatacataaatgtagatcat 216932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 693526 - 693492
Alignment:
Q  1 cattgagatttttcaaatacataaatgtagatcat 35  Q
    |||||||||||||||||||||||||||||||||||    
T  693526 cattgagatttttcaaatacataaatgtagatcat 693492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 697735 - 697701
Alignment:
Q  1 cattgagatttttcaaatacataaatgtagatcat 35  Q
    |||||||||||||||||||||||||||||||||||    
T  697735 cattgagatttttcaaatacataaatgtagatcat 697701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 730589 - 730555
Alignment:
Q  1 cattgagatttttcaaatacataaatgtagatcat 35  Q
    |||||||||||||||||||||||||||||||||||    
T  730589 cattgagatttttcaaatacataaatgtagatcat 730555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 854484 - 854450
Alignment:
Q  1 cattgagatttttcaaatacataaatgtagatcat 35  Q
    |||||||||||||||||||||||||||||||||||    
T  854484 cattgagatttttcaaatacataaatgtagatcat 854450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 296; Significance: 1e-166; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 172 - 573
Target Start/End: Original strand, 43738121 - 43738521
Alignment:
Q  172 cttcaaatacagtgaagcttgttgtggtggttttccatattcgaatttattttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 271  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43738121 cttcaaatacagtgaagcttgttgtggtggttttccagatacgaatttattttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 43738220  T
Q  272 gaagatgaatgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatttctttctctttattttgattcaagaa 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||  ||||||||||||||||||||||||    
T  43738221 gaagatgaatgatttgtttgaagaacacataaatgaatgaatgaagatgaatagctgggtttcac-attagattcatttctctttattttgattcaagaa 43738319  T
Q  372 tatttttgaagggaaaaataaattgagatgaaattttcatagggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgt 471  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||       ||||||||    
T  43738320 tatttttgaagggaaaaataaattgagatgaaattttcatagggtgacgataataaactaagttgttaaggttaaagattatgtgaaaaaaatagagtgt 43738419  T
Q  472 ggatagactatagtaacaatggtggtactactcaatctaatggttnnnnnnngactttcccatggtaaaaaagaagtatcatttcccagattaaatgaca 571  Q
    |||||||||||||||| ||||||||||||||||||||||||||||       ||||||||||||||  ||||||||||||||||| ||| ||||||| ||    
T  43738420 ggatagactatagtaataatggtggtactactcaatctaatggttaagaaaagactttcccatggtggaaaagaagtatcatttctcaggttaaatggca 43738519  T
Q  572 cc 573  Q
    ||    
T  43738520 cc 43738521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 223 - 516
Target Start/End: Original strand, 47523880 - 47524186
Alignment:
Q  223 ttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggtgaagatgaatgatttgtttgaagaacacataa----atgaatgaatgaaga 318  Q
    |||||||||||||||| ||||||| || |||||||||||||| |||||||||||||||||||||||||||| |||||||||    ||||| ||||||| |    
T  47523880 ttgttgttgtgatgtttcagatctaaaattttaggaagaaaaaattggtgaagatgaatgatttgtttgaataacacataaatgtatgaacgaatgaaaa 47523979  T
Q  319 tgaatagttgggtttcacaattaga----tttc------tttctctttattttgattcaagaatatttttgaagggaaaaataaatt--gagatgaaatt 406  Q
    ||||||||||||||||| |||||||    ||||      ||||||| ||||||| |||||||||||||||| |||||||||||||||  |||||| ||||    
T  47523980 tgaatagttgggtttca-aattagattcttttctctccatttctctctattttgtttcaagaatatttttgtagggaaaaataaattgagagatgtaatt 47524078  T
Q  407 ttcatagggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgtggatagactatagtaacaatggtggtactactcaa 506  Q
    |||| | |||||  |||||||| | ||||||||||||| ||||| |||||       || ||||||||||| ||||| ||||||||||||||||||||||    
T  47524079 ttcaca-ggtgaagataataaaatgagttgttaaggttggagataatgtg-aaaaaatatagtgtggataggctataataacaatggtggtactactcaa 47524176  T
Q  507 tctaatggtt 516  Q
    ||||| ||||    
T  47524177 tctaagggtt 47524186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 414 - 567
Target Start/End: Complemental strand, 55159339 - 55159186
Alignment:
Q  414 ggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgtggatagactatagtaacaatggtggtactactcaatctaatg 513  Q
    |||||| |||||||||| | |||||||||||||||||||||||       || ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  55159339 ggtgacgataataaacttaattgttaaggttagagatgatgtgaagaaattatagtgtggatagactataataataatggtggtactactcaatctaatg 55159240  T
Q  514 gttnnnnnnngactttcccatggtaaaaaagaagtatcatttcccagattaaat 567  Q
    ||        |||||||||||||||  |||||||| || ||||||| |||||||    
T  55159239 gtaaaaaaaagactttcccatggtaggaaagaagtctcctttcccaaattaaat 55159186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 435 - 515
Target Start/End: Original strand, 28684142 - 28684222
Alignment:
Q  435 tgttaaggttagagatgatgtgnnnnnnntagagtgtggatagactatagtaacaatggtggtactactcaatctaatggt 515  Q
    ||||||||||||||||||||||       || ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  28684142 tgttaaggttagagatgatgtgaagaaaatatagtgtggctagactataataacaatggtggtactactcaatctaatggt 28684222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 468 - 573
Target Start/End: Original strand, 47199338 - 47199443
Alignment:
Q  468 gtgtggatagactatagtaacaatggtggtactactcaatctaatggttnnnnnnngactttcccatggtaaaaaagaagtatcatttcccagattaaat 567  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||        |||||||| |||||   |||||||| || ||||||| |||||||    
T  47199338 gtgtggatagactataataacaatggtggtactactcaatctaatggtaaaaaaatgactttcctatggtgggaaagaagtctcttttcccaaattaaat 47199437  T
Q  568 gacacc 573  Q
    | ||||    
T  47199438 gccacc 47199443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 525 - 573
Target Start/End: Complemental strand, 39522423 - 39522375
Alignment:
Q  525 actttcccatggtaaaaaagaagtatcatttcccagattaaatgacacc 573  Q
    ||||||||||||| |||||||| |||| ||||||| |||||||||||||    
T  39522423 actttcccatggtgaaaaagaactatcctttcccaaattaaatgacacc 39522375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 43737948 - 43737982
Alignment:
Q  1 cattgagatttttcaaatacataaatgtagatcat 35  Q
    |||||||||||||||||||||||||||| ||||||    
T  43737948 cattgagatttttcaaatacataaatgtcgatcat 43737982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 55159436 - 55159399
Alignment:
Q  271 tgaagatgaatgatttgtttgaagaacacataaatgaa 308  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  55159436 tgaagatgaattatttgtttgaagaacccataaatgaa 55159399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1037 (Bit Score: 277; Significance: 1e-155; HSPs: 2)
Name: scaffold1037
Description:

Target: scaffold1037; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 172 - 567
Target Start/End: Original strand, 2550 - 2941
Alignment:
Q  172 cttcaaatacagtgaagcttgttgtggtggttttccatattcgaatttattttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 271  Q
    ||||||||| |||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2550 cttcaaataaagtgaagcttgttgtggtggtttttcagatccgaatttgttttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 2649  T
Q  272 gaagatgaatgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatttctttctctttattttgattcaagaa 371  Q
    ||||||||||||||||||||||||||||||||||||| |||    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2650 gaagatgaatgatttgtttgaagaacacataaatgaacgaa----gatgaatagttgggtttcacaattagattcctttctctttattttgattcaagaa 2745  T
Q  372 tatttttgaagggaaaaataaattgagatgaaattttcatagggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgt 471  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |       ||||||||    
T  2746 tatttttgaaggaaaaaataaattgagattaaattttcatagggtgacgataataaactaagttgttaaggttagagatgatgcgaaaaaaatagagtgt 2845  T
Q  472 ggatagactatagtaacaatggtggtactactcaatctaatggttnnnnnnngactttcccatggtaaaaaagaagtatcatttcccagattaaat 567  Q
    |||||||||||| |||||||||||||||||||||||||||||| |       ||||||||||||||| |||||||||||| |||||||||||||||    
T  2846 ggatagactataataacaatggtggtactactcaatctaatggataaaaaaagactttcccatggtagaaaagaagtatcctttcccagattaaat 2941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1037; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 2380 - 2413
Alignment:
Q  2 attgagatttttcaaatacataaatgtagatcat 35  Q
    ||||||||||||||||||||||||||||||||||    
T  2380 attgagatttttcaaatacataaatgtagatcat 2413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1031 (Bit Score: 277; Significance: 1e-155; HSPs: 2)
Name: scaffold1031
Description:

Target: scaffold1031; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 172 - 567
Target Start/End: Original strand, 2669 - 3060
Alignment:
Q  172 cttcaaatacagtgaagcttgttgtggtggttttccatattcgaatttattttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 271  Q
    ||||||||| |||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2669 cttcaaataaagtgaagcttgttgtggtggtttttcagatccgaatttgttttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggt 2768  T
Q  272 gaagatgaatgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatttctttctctttattttgattcaagaa 371  Q
    ||||||||||||||||||||||||||||||||||||| |||    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2769 gaagatgaatgatttgtttgaagaacacataaatgaacgaa----gatgaatagttgggtttcacaattagattcctttctctttattttgattcaagaa 2864  T
Q  372 tatttttgaagggaaaaataaattgagatgaaattttcatagggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgt 471  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |       ||||||||    
T  2865 tatttttgaaggaaaaaataaattgagattaaattttcatagggtgacgataataaactaagttgttaaggttagagatgatgcgaaaaaaatagagtgt 2964  T
Q  472 ggatagactatagtaacaatggtggtactactcaatctaatggttnnnnnnngactttcccatggtaaaaaagaagtatcatttcccagattaaat 567  Q
    |||||||||||| |||||||||||||||||||||||||||||| |       ||||||||||||||| |||||||||||| |||||||||||||||    
T  2965 ggatagactataataacaatggtggtactactcaatctaatggataaaaaaagactttcccatggtagaaaagaagtatcctttcccagattaaat 3060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1031; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 2498 - 2532
Alignment:
Q  1 cattgagatttttcaaatacataaatgtagatcat 35  Q
    |||||||||||||||||||||||||||||||||||    
T  2498 cattgagatttttcaaatacataaatgtagatcat 2532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 1e-67; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 176 - 516
Target Start/End: Complemental strand, 17494807 - 17494469
Alignment:
Q  176 aaatacagtgaagcttgttgtggtggttttccatattcgaatttatt-ttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggtgaa 274  Q
    ||||||| |||||||||||||| |||||||||| || | ||| |||| ||||| | ||||| | ||| ||||||||| |||||||||||||||||| |||    
T  17494807 aaatacaatgaagcttgttgtgatggttttccaaatccaaatctattcttgttttggtgat-taccaaatctcaactgttaggaagaaaagattggcgaa 17494709  T
Q  275 gatgaatgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtttcacaattagatttctttctctttattttgattcaagaatat 374  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    |||||||  ||||||||  ||||||||||||||| ||||| ||||     
T  17494708 gatgaatgatttgtttaaagaacacataaatgaatgaatgaagatgaata---aggtttca-gattagattcatttctctttattttgtttcaaaaatag 17494613  T
Q  375 ttttgaagggaaaaataaatt--gagatgaaattttcatagggtgacaataataaactaagttgttaaggttagagatgatgtg-nnnnnnntagagtgt 471  Q
    |||||||||||||||||||||  |||||| ||||| ||||  || || |||||||||| ||||| |||||| ||| ||||||||        || |||||    
T  17494612 ttttgaagggaaaaataaattgagagatgtaatttccata-tgtcacgataataaactgagttgataaggtcagatatgatgtgaaaaattatatagtgt 17494514  T
Q  472 ggatagactatagtaacaatggtggtactactcaatctaatggtt 516  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  17494513 ggatagactataataacaatggtggtactattcaatctaatggtt 17494469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 515
Target Start/End: Original strand, 37874850 - 37874951
Alignment:
Q  414 ggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgtggatagactatagtaacaatggtggtactactcaatctaatg 513  Q
    |||||| |||||||||| |||||||||||||||||||||||||       || ||||||||||||||||| |||||||| |||||||| |||||||||||    
T  37874850 ggtgacgataataaacttagttgttaaggttagagatgatgtgaagaaaatatagtgtggatagactataataacaatgatggtactaatcaatctaatg 37874949  T
Q  514 gt 515  Q
    ||    
T  37874950 gt 37874951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 467 - 577
Target Start/End: Original strand, 48870695 - 48870805
Alignment:
Q  467 agtgtggatagactatagtaacaatggtggtactactcaatctaatggttnnnnnnngactttcccatggtaaaaaagaagtatcatttcccagattaaa 566  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||        ||||||||||||||   ||| |||| ||||||||||  |||||    
T  48870695 agtgtggatagactataataacaatggtggtactactcaatctaatggtaaaaaaaagactttcccatggtgggaaaaaagtctcatttcccaagttaaa 48870794  T
Q  567 tgacacccaaa 577  Q
    |  ||||||||    
T  48870795 ttccacccaaa 48870805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 467 - 515
Target Start/End: Original strand, 35616716 - 35616764
Alignment:
Q  467 agtgtggatagactatagtaacaatggtggtactactcaatctaatggt 515  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35616716 agtgtggatagactataataacaatggtggtactactcaatctaatggt 35616764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 271 - 316
Target Start/End: Original strand, 37874742 - 37874787
Alignment:
Q  271 tgaagatgaatgatttgtttgaagaacacataaatgaatgaatgaa 316  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  37874742 tgaagatgaattatttgtttgaagaacacataaatgaatgaatgaa 37874787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 525 - 573
Target Start/End: Complemental strand, 38930360 - 38930312
Alignment:
Q  525 actttcccatggtaaaaaagaagtatcatttcccagattaaatgacacc 573  Q
    ||||||||||||| |||||||| | || ||||||| |||||||||||||    
T  38930360 actttcccatggtgaaaaagaactttcctttcccaaattaaatgacacc 38930312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 7e-66; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 223 - 516
Target Start/End: Complemental strand, 36476141 - 36475836
Alignment:
Q  223 ttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggtgaagatgaatgatttgtttgaagaacacataa----atgaatgaatgaaga 318  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||    ||||| |||||||||    
T  36476141 ttgttgttgtgatgttccagatctaaaattttaggaagaaaaaattggtgaagatgaatgatttgtttgaagaacacataaatgtatgaacgaatgaaga 36476042  T
Q  319 tgaatagttgggtttcacaattaga----tttc------tttctctttattttgattcaagaatatttttgaagggaaaaataaatt--gagatgaaatt 406  Q
    ||||||||||||||||| |||||||    ||||      ||||||| ||||||| |||||||||||||||| ||| |||||||||||  |||||| ||||    
T  36476041 tgaatagttgggtttca-aattagattgttttctctccatttctctctattttgtttcaagaatatttttgtaggcaaaaataaattgagagatgtaatt 36475943  T
Q  407 ttcatagggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgtggatagactatagtaacaatggtggtactactcaa 506  Q
    |||| | |||||  |||||||| | ||||||||||||| |||||||||||       || ||||||||||||||||| ||||||||||||||||||||||    
T  36475942 ttcaca-ggtgaagataataaaatgagttgttaaggttggagatgatgtg--aaaaatatagtgtggatagactataataacaatggtggtactactcaa 36475846  T
Q  507 tctaatggtt 516  Q
    ||||| ||||    
T  36475845 tctaagggtt 36475836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 414 - 510
Target Start/End: Original strand, 5277284 - 5277380
Alignment:
Q  414 ggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgtggatagactatagtaacaatggtggtactactcaatcta 510  Q
    |||||| |||||||||| ||||||||||||| |||||||||||       || ||||||||||||||||| ||||||||||||||||||| ||||||    
T  5277284 ggtgacgataataaacttagttgttaaggttggagatgatgtgaagaaaatatagtgtggatagactataataacaatggtggtactacttaatcta 5277380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 271 - 316
Target Start/End: Original strand, 5277175 - 5277220
Alignment:
Q  271 tgaagatgaatgatttgtttgaagaacacataaatgaatgaatgaa 316  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  5277175 tgaagatgaattatttgtttgaagaacacataaatgaatgaatgaa 5277220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 5e-36; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 176 - 316
Target Start/End: Complemental strand, 4554152 - 4554011
Alignment:
Q  176 aaatacagtgaagcttgttgtggtggttttccatattcgaatttatt-ttgttgttgtgatgttccagatctcaacttttaggaagaaaagattggtgaa 274  Q
    ||||||| ||||| |||||||||| ||||| || || ||||||| || |||||||| ||||||||||||||| | ||| |||||||||||||||||||||    
T  4554152 aaatacaatgaagtttgttgtggtagtttttcaaatccgaatttgttcttgttgttttgatgttccagatctgaccttgtaggaagaaaagattggtgaa 4554053  T
Q  275 gatgaatgatttgtttgaagaacacataaatgaatgaatgaa 316  Q
    |||||||||||| ||||||||||||| |||||||||| ||||    
T  4554052 gatgaatgatttatttgaagaacacaaaaatgaatgattgaa 4554011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 435 - 573
Target Start/End: Complemental strand, 13655071 - 13654933
Alignment:
Q  435 tgttaaggttagagatgatgtgnnnnnnntagagtgtggatagactatagtaacaatggtggtactactcaatctaatggttnnnnnnngactttcccat 534  Q
    ||||||||||||||||||||||       || ||||||||||||||||| |||||||||||||||||||||||||||||||        |||||||| ||    
T  13655071 tgttaaggttagagatgatgtgaagaaaatatagtgtggatagactataataacaatggtggtactactcaatctaatggtaaaaaaaagactttcctat 13654972  T
Q  535 ggtaaaaaagaagtatcatttcccagattaaatgacacc 573  Q
    |||   |||||||| || ||||||| |||||||| ||||    
T  13654971 ggtgggaaagaagtctcctttcccaaattaaatgtcacc 13654933  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 4553834 - 4553786
Alignment:
Q  468 gtgtggatagactatagtaacaatggtggtactactcaatctaatggtt 516  Q
    |||| ||||||||||| |||||||| |||||||||| |||| |||||||    
T  4553834 gtgtagatagactataataacaatgatggtactacttaatcaaatggtt 4553786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 7e-26; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 414 - 515
Target Start/End: Original strand, 9574460 - 9574561
Alignment:
Q  414 ggtgacaataataaactaagttgttaaggttagagatgatgtgnnnnnnntagagtgtggatagactatagtaacaatggtggtactactcaatctaatg 513  Q
    |||||| |||||||||| |||||||||||||||||||||||||       || ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  9574460 ggtgacgataataaacttagttgttaaggttagagatgatgtgaagaaaatatagtgtggatagactataataacaatggtggtactactcaatttaatg 9574559  T
Q  514 gt 515  Q
    ||    
T  9574560 gt 9574561  T

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Target: chr6; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 271 - 332
Target Start/End: Original strand, 9574355 - 9574416
Alignment:
Q  271 tgaagatgaatgatttgtttgaagaacacataaatgaatgaatgaagatgaatagttgggtt 332  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9574355 tgaagatgaattatttgtttgaagaacacataaatgaatgaatgaagatgaataattgggtt 9574416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 525 - 573
Target Start/End: Original strand, 7532440 - 7532488
Alignment:
Q  525 actttcccatggtaaaaaagaagtatcatttcccagattaaatgacacc 573  Q
    ||||||||||||| |||||||||| || ||||||| |||||||| ||||    
T  7532440 actttcccatggtgaaaaagaagtctcctttcccaaattaaatgccacc 7532488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 467 - 515
Target Start/End: Original strand, 17227890 - 17227938
Alignment:
Q  467 agtgtggatagactatagtaacaatggtggtactactcaatctaatggt 515  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17227890 agtgtggatagactataataacaatggtggtactactcaatctaatggt 17227938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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