View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0541_low_2 (Length: 770)

Name: NF0541_low_2
Description: NF0541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0541_low_2
NF0541_low_2
[»] chr5 (38 HSPs)
chr5 (1-230)||(14868816-14869045)
chr5 (1-230)||(24490854-24491083)
chr5 (1-230)||(6497335-6497565)
chr5 (1-230)||(10461355-10461585)
chr5 (1-230)||(3598556-3598786)
chr5 (1-218)||(6542281-6542499)
chr5 (1-230)||(22394134-22394364)
chr5 (1-220)||(18786002-18786221)
chr5 (1-230)||(43196911-43197141)
chr5 (1-230)||(7133268-7133501)
chr5 (1-230)||(4122589-4122817)
chr5 (1-168)||(5933197-5933365)
chr5 (1-207)||(15969573-15969780)
chr5 (1-168)||(29991245-29991413)
chr5 (1-144)||(41137284-41137427)
chr5 (29-230)||(25329107-25329309)
chr5 (4-140)||(7586179-7586315)
chr5 (72-229)||(24491057-24491215)
chr5 (72-230)||(3598423-3598582)
chr5 (1-140)||(16415966-16416105)
chr5 (72-229)||(10461559-10461717)
chr5 (103-229)||(18786226-18786352)
chr5 (1-80)||(40588811-40588890)
chr5 (72-217)||(15969453-15969599)
chr5 (103-229)||(43197146-43197273)
chr5 (72-229)||(6497203-6497361)
chr5 (1-111)||(38680459-38680570)
chr5 (103-186)||(22394369-22394453)
chr5 (72-186)||(29991156-29991271)
chr5 (103-220)||(41137161-41137279)
chr5 (103-168)||(40588895-40588960)
chr5 (103-168)||(40589498-40589563)
chr5 (103-186)||(5933370-5933454)
chr5 (1-40)||(24640648-24640687)
chr5 (103-216)||(4122822-4122936)
chr5 (72-173)||(14868740-14868842)
chr5 (72-168)||(6542473-6542570)
chr5 (3-125)||(8024605-8024727)
[»] chr2 (51 HSPs)
chr2 (1-230)||(12806692-12806922)
chr2 (1-230)||(18369023-18369253)
chr2 (1-230)||(10748504-10748734)
chr2 (1-230)||(3371445-3371675)
chr2 (1-230)||(42705095-42705325)
chr2 (1-229)||(29683318-29683546)
chr2 (1-230)||(4171668-4171898)
chr2 (1-230)||(14379123-14379353)
chr2 (1-230)||(30432606-30432835)
chr2 (1-230)||(28921336-28921566)
chr2 (1-230)||(2395300-2395530)
chr2 (1-230)||(41593961-41594191)
chr2 (1-230)||(7877333-7877564)
chr2 (1-230)||(3948374-3948604)
chr2 (1-230)||(37608967-37609195)
chr2 (1-230)||(19204735-19204966)
chr2 (1-219)||(13572614-13572833)
chr2 (1-160)||(17457798-17457958)
chr2 (1-230)||(32521618-32521848)
chr2 (1-230)||(33940691-33940917)
chr2 (4-174)||(6880039-6880210)
chr2 (1-205)||(6163939-6164138)
chr2 (39-187)||(25318369-25318518)
chr2 (1-96)||(38873615-38873710)
chr2 (103-229)||(41594196-41594323)
chr2 (72-218)||(30432809-30432956)
chr2 (103-220)||(18369258-18369375)
chr2 (72-229)||(19204603-19204761)
chr2 (72-216)||(3371326-3371471)
chr2 (72-224)||(33940891-33941044)
chr2 (103-229)||(2395168-2395295)
chr2 (103-229)||(6880218-6880345)
chr2 (103-230)||(29683186-29683313)
chr2 (72-216)||(32521498-32521644)
chr2 (103-230)||(7877569-7877698)
chr2 (72-186)||(17457932-17458047)
chr2 (103-229)||(28921205-28921331)
chr2 (72-216)||(3948578-3948724)
chr2 (72-229)||(14379327-14379485)
chr2 (82-219)||(25318518-25318656)
chr2 (72-168)||(12806621-12806718)
chr2 (6-107)||(31420762-31420863)
chr2 (72-186)||(6164112-6164227)
chr2 (103-229)||(13572483-13572609)
chr2 (103-219)||(37609199-37609317)
chr2 (72-168)||(4171597-4171694)
chr2 (1-36)||(30771211-30771246)
chr2 (82-144)||(10748718-10748780)
chr2 (72-144)||(30771165-30771237)
chr2 (19-134)||(7834239-7834352)
chr2 (72-174)||(38873538-38873641)
[»] chr4 (54 HSPs)
chr4 (1-230)||(17865119-17865349)
chr4 (1-230)||(17107575-17107804)
chr4 (1-230)||(26314486-26314715)
chr4 (1-218)||(37815484-37815703)
chr4 (1-230)||(32592753-32592983)
chr4 (1-230)||(989087-989315)
chr4 (1-230)||(4712321-4712550)
chr4 (1-230)||(16959773-16960004)
chr4 (1-230)||(22487363-22487591)
chr4 (1-230)||(13492894-13493124)
chr4 (1-230)||(16491790-16492019)
chr4 (1-230)||(13683147-13683370)
chr4 (1-217)||(12792595-12792812)
chr4 (1-230)||(43750090-43750318)
chr4 (1-214)||(11021816-11022030)
chr4 (1-159)||(46481060-46481219)
chr4 (1-158)||(5721095-5721254)
chr4 (1-174)||(2184461-2184634)
chr4 (1-168)||(20045945-20046113)
chr4 (1-230)||(9301582-9301809)
chr4 (1-115)||(39385287-39385401)
chr4 (1-127)||(1106401-1106527)
chr4 (1-93)||(46081522-46081614)
chr4 (72-229)||(989289-989447)
chr4 (72-220)||(13683024-13683173)
chr4 (72-229)||(5720964-5721121)
chr4 (72-229)||(2184608-2184767)
chr4 (72-230)||(11021683-11021842)
chr4 (72-218)||(22487242-22487389)
chr4 (72-229)||(16959978-16960136)
chr4 (72-229)||(37815352-37815510)
chr4 (697-741)||(21354929-21354973)
chr4 (32-140)||(49097664-49097772)
chr4 (72-218)||(26314689-26314836)
chr4 (72-186)||(43750001-43750116)
chr4 (72-229)||(17107443-17107601)
chr4 (103-204)||(17865012-17865114)
chr4 (154-230)||(42239370-42239446)
chr4 (82-168)||(12792796-12792883)
chr4 (72-218)||(46081588-46081735)
chr4 (639-680)||(21354851-21354892)
chr4 (103-186)||(9301814-9301898)
chr4 (22-125)||(14180435-14180536)
chr4 (143-230)||(39385192-39385279)
chr4 (72-217)||(39385375-39385522)
chr4 (104-173)||(13493130-13493200)
chr4 (81-186)||(16491701-16491807)
chr4 (133-230)||(46081436-46081533)
chr4 (189-230)||(2184434-2184475)
chr4 (72-174)||(46480983-46481086)
chr4 (26-119)||(28306919-28307013)
chr4 (3-113)||(38050872-38050982)
chr4 (3-68)||(7973738-7973803)
chr4 (440-493)||(51108814-51108866)
[»] chr3 (37 HSPs)
chr3 (1-230)||(42093405-42093635)
chr3 (1-230)||(17109861-17110091)
chr3 (1-230)||(32315386-32315616)
chr3 (1-230)||(29838304-29838534)
chr3 (1-230)||(49499986-49500216)
chr3 (1-230)||(50645615-50645845)
chr3 (1-230)||(52835688-52835918)
chr3 (1-230)||(14545845-14546076)
chr3 (1-230)||(26582623-26582852)
chr3 (1-230)||(27934594-27934824)
chr3 (1-230)||(46962592-46962822)
chr3 (1-229)||(38807681-38807910)
chr3 (1-230)||(55092350-55092580)
chr3 (1-173)||(33162387-33162560)
chr3 (1-196)||(27285113-27285307)
chr3 (1-144)||(49121859-49122002)
chr3 (1-127)||(16056491-16056617)
chr3 (44-187)||(889181-889325)
chr3 (1-105)||(7029528-7029632)
chr3 (72-229)||(14546050-14546208)
chr3 (72-229)||(26582826-26582984)
chr3 (72-229)||(27934462-27934620)
chr3 (72-229)||(52835556-52835714)
chr3 (72-220)||(16056369-16056517)
chr3 (82-229)||(27284981-27285129)
chr3 (72-230)||(38807548-38807707)
chr3 (72-219)||(49499864-49500012)
chr3 (72-229)||(32315590-32315747)
chr3 (52-125)||(39062613-39062686)
chr3 (103-229)||(46962827-46962954)
chr3 (103-220)||(7029405-7029523)
chr3 (72-229)||(29838508-29838666)
chr3 (72-229)||(50645483-50645641)
chr3 (72-216)||(33162534-33162679)
chr3 (72-229)||(49121726-49121885)
chr3 (103-229)||(21323133-21323260)
chr3 (81-229)||(42093618-42093766)
[»] chr1 (38 HSPs)
chr1 (1-230)||(20061808-20062038)
chr1 (1-230)||(28031790-28032020)
chr1 (1-230)||(43191666-43191896)
chr1 (3-230)||(50096278-50096506)
chr1 (1-230)||(26244692-26244922)
chr1 (1-230)||(37172258-37172488)
chr1 (1-230)||(33700-33930)
chr1 (1-211)||(10913917-10914128)
chr1 (1-230)||(50624909-50625137)
chr1 (1-230)||(14602153-14602381)
chr1 (1-230)||(42154893-42155122)
chr1 (1-230)||(39288162-39288394)
chr1 (1-230)||(47829105-47829333)
chr1 (1-230)||(12322235-12322467)
chr1 (4-160)||(33618976-33619133)
chr1 (103-229)||(50096144-50096271)
chr1 (116-230)||(39027491-39027606)
chr1 (72-229)||(26244560-26244718)
chr1 (72-229)||(14602021-14602179)
chr1 (24-125)||(7337053-7337154)
chr1 (103-220)||(33577-33695)
chr1 (72-229)||(20062012-20062170)
chr1 (72-229)||(28031658-28031816)
chr1 (72-229)||(50624777-50624935)
chr1 (81-229)||(18963620-18963769)
chr1 (1-106)||(29584536-29584641)
chr1 (82-230)||(12322102-12322251)
chr1 (72-216)||(43191870-43192015)
chr1 (103-186)||(10913828-10913912)
chr1 (103-229)||(33619141-33619268)
chr1 (103-216)||(37172493-37172607)
chr1 (1-140)||(44561680-44561822)
chr1 (1-76)||(11200353-11200428)
chr1 (72-186)||(47829017-47829131)
chr1 (1-40)||(52490080-52490119)
chr1 (103-156)||(51999559-51999613)
chr1 (72-230)||(39288368-39288528)
chr1 (103-174)||(42154816-42154888)
[»] scaffold0137 (2 HSPs)
scaffold0137 (1-230)||(36777-37005)
scaffold0137 (72-144)||(36979-37051)
[»] chr8 (47 HSPs)
chr8 (1-230)||(3272863-3273093)
chr8 (1-230)||(13154382-13154612)
chr8 (1-230)||(13405591-13405821)
chr8 (1-230)||(18764295-18764525)
chr8 (4-230)||(31402922-31403150)
chr8 (1-230)||(6943800-6944030)
chr8 (1-220)||(9180188-9180408)
chr8 (1-230)||(24332405-24332631)
chr8 (1-174)||(31685813-31685988)
chr8 (1-174)||(31186516-31186690)
chr8 (1-144)||(6891921-6892064)
chr8 (1-141)||(37586118-37586257)
chr8 (1-230)||(20112558-20112787)
chr8 (3-120)||(220657-220774)
chr8 (3-120)||(689812-689929)
chr8 (3-120)||(734280-734397)
chr8 (3-120)||(858176-858293)
chr8 (1-219)||(27993298-27993517)
chr8 (1-219)||(28050600-28050819)
chr8 (106-230)||(2835342-2835466)
chr8 (1-84)||(26479451-26479534)
chr8 (7-84)||(2835274-2835351)
chr8 (7-106)||(36449102-36449201)
chr8 (106-230)||(26479336-26479460)
chr8 (1-125)||(2679095-2679219)
chr8 (1-125)||(37856361-37856485)
chr8 (72-229)||(13154250-13154408)
chr8 (103-229)||(31186385-31186511)
chr8 (72-220)||(31685690-31685839)
chr8 (103-218)||(6943679-6943795)
chr8 (103-229)||(220524-220650)
chr8 (103-229)||(689679-689805)
chr8 (103-229)||(734147-734273)
chr8 (103-229)||(858043-858169)
chr8 (103-229)||(2835136-2835263)
chr8 (103-229)||(31403158-31403285)
chr8 (72-229)||(13405459-13405617)
chr8 (72-216)||(24332285-24332431)
chr8 (103-229)||(6891790-6891916)
chr8 (81-168)||(18764508-18764596)
chr8 (72-186)||(9180099-9180214)
chr8 (103-229)||(26479539-26479666)
chr8 (1-80)||(32399152-32399229)
chr8 (72-144)||(3272817-3272889)
chr8 (190-230)||(31186677-31186717)
chr8 (22-125)||(20764689-20764791)
chr8 (56-125)||(36820420-36820489)
[»] chr7 (34 HSPs)
chr7 (1-218)||(42517010-42517228)
chr7 (1-230)||(19157836-19158066)
chr7 (1-230)||(20757235-20757465)
chr7 (1-230)||(40729206-40729436)
chr7 (4-230)||(24366-24593)
chr7 (1-230)||(44219304-44219534)
chr7 (1-230)||(44483373-44483599)
chr7 (1-230)||(35026587-35026816)
chr7 (1-230)||(22364667-22364891)
chr7 (1-230)||(34595328-34595559)
chr7 (1-173)||(31579498-31579671)
chr7 (1-205)||(34487285-34487491)
chr7 (1-230)||(19476537-19476769)
chr7 (7-168)||(22954412-22954574)
chr7 (1-131)||(13426403-13426532)
chr7 (1-114)||(23177190-23177303)
chr7 (80-219)||(22364873-22365013)
chr7 (72-230)||(34595533-34595692)
chr7 (72-220)||(13426506-13426655)
chr7 (1-117)||(23190504-23190621)
chr7 (93-230)||(829916-830052)
chr7 (93-230)||(1195096-1195232)
chr7 (72-229)||(42516878-42517036)
chr7 (103-229)||(35026456-35026582)
chr7 (72-229)||(19157706-19157862)
chr7 (72-229)||(20757105-20757261)
chr7 (81-229)||(44219517-44219666)
chr7 (82-220)||(34487162-34487301)
chr7 (103-186)||(22954576-22954660)
chr7 (103-186)||(31579676-31579761)
chr7 (103-229)||(44483240-44483368)
chr7 (103-168)||(40729135-40729201)
chr7 (103-174)||(24601-24673)
chr7 (178-230)||(13426335-13426387)
[»] chr6 (34 HSPs)
chr6 (1-230)||(17238177-17238407)
chr6 (1-230)||(30608876-30609106)
chr6 (1-230)||(5404713-5404943)
chr6 (1-230)||(8926330-8926562)
chr6 (1-230)||(3345030-3345259)
chr6 (1-230)||(28853628-28853858)
chr6 (1-230)||(8936587-8936819)
chr6 (1-230)||(16525336-16525566)
chr6 (1-230)||(19661360-19661589)
chr6 (1-230)||(5923970-5924201)
chr6 (1-207)||(29819529-29819736)
chr6 (1-174)||(31717318-31717492)
chr6 (1-227)||(33783409-33783637)
chr6 (1-230)||(3484927-3485147)
chr6 (52-230)||(26272174-26272353)
chr6 (91-230)||(9571629-9571769)
chr6 (22-107)||(4601117-4601202)
chr6 (52-120)||(18502719-18502787)
chr6 (72-229)||(8926198-8926356)
chr6 (72-229)||(8936455-8936613)
chr6 (72-220)||(3484803-3484953)
chr6 (72-229)||(31717186-31717344)
chr6 (72-220)||(33783611-33783761)
chr6 (103-219)||(19661594-19661711)
chr6 (143-230)||(5409181-5409268)
chr6 (72-230)||(30609080-30609239)
chr6 (72-229)||(3345233-3345391)
chr6 (81-229)||(5923837-5923987)
chr6 (103-229)||(16525207-16525331)
chr6 (81-220)||(17238052-17238194)
chr6 (72-217)||(28853507-28853654)
chr6 (72-174)||(29819452-29819555)
chr6 (150-229)||(5140701-5140780)
chr6 (103-144)||(5404667-5404708)
[»] scaffold0817 (2 HSPs)
scaffold0817 (1-230)||(4126-4355)
scaffold0817 (72-229)||(3994-4152)
[»] scaffold0103 (2 HSPs)
scaffold0103 (1-230)||(43287-43518)
scaffold0103 (81-219)||(43501-43640)
[»] scaffold0006 (3 HSPs)
scaffold0006 (1-230)||(212422-212652)
scaffold0006 (103-216)||(212657-212771)
scaffold0006 (22-125)||(186654-186756)
[»] scaffold0170 (2 HSPs)
scaffold0170 (1-230)||(8551-8782)
scaffold0170 (81-186)||(8765-8871)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-220)||(118171-118395)
scaffold0021 (111-229)||(118040-118159)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-230)||(74058-74286)
[»] scaffold0126 (2 HSPs)
scaffold0126 (1-220)||(36014-36234)
scaffold0126 (72-230)||(36208-36366)
[»] scaffold0167 (2 HSPs)
scaffold0167 (1-128)||(4500-4627)
scaffold0167 (72-229)||(4601-4759)
[»] scaffold0147 (2 HSPs)
scaffold0147 (40-204)||(25293-25458)
scaffold0147 (103-216)||(25147-25261)
[»] scaffold0036 (1 HSPs)
scaffold0036 (3-125)||(11187-11309)
[»] scaffold0045 (1 HSPs)
scaffold0045 (176-230)||(43987-44041)


Alignment Details
Target: chr5 (Bit Score: 178; Significance: 1e-95; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 14868816 - 14869045
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14868816 tcatattgaaattggtccctataatatttattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 14868915  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacc 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||||   |||| |||||    
T  14868916 caattttacaaggactaaaacaaaataccaaggatcaaaaccaaatttttatatttgcagggactaaaaccaaaaaaatatttttacagtgactaaaacc 14869015  T
Q  201 aaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||||| |||||||||    
T  14869016 aaaatgtcagatatttgcagggactatttt 14869045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 24491083 - 24490854
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  24491083 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacacattacaaggaccaaatccaatatgaat 24490984  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  24490983 caattttacaaggactaaaacaaaataccgatgatcaaaaccaaattttctatatttgcagggactaaaaccaaa-aaatatttttacagggactaaaac 24490885  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  24490884 caaaatgtcagatatttgcagggactatttt 24490854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 6497335 - 6497565
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6497335 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 6497434  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
     |||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||  ||||||  |||| ||||||||||||  ||||| ||||    
T  6497435 taattttacaaggactaaaacaaaatatcaaggatcaaaaccaaattttttatatttgcaggaactaaaatcaaaaaaatatttttacagggactaaaac 6497534  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| ||| |||||    
T  6497535 caaaatgtcagatatttgcagggacaatttt 6497565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 10461585 - 10461355
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  10461585 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatataaat 10461486  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||||||   ||| |||||||||||| | |||| ||||    
T  10461485 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaataaaaaaaatatttttacaaagactaaaac 10461386  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||| | ||||||||||| |||||||||    
T  10461385 caaaatgacggatatttgcagggactatttt 10461355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 3598556 - 3598786
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  3598556 tcatattgaaattggtccctataatattctttttagtcctcattttgagggactaaaatcaaatattctacgtattacaaggatcaaatccaatatgaat 3598655  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||  ||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  3598656 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttcctatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 3598755  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||  |||||||||    
T  3598756 caaaatgtcagatatttgcaaggactatttt 3598786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 6542499 - 6542281
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  6542499 tcatattgaaattggtccctataatattcattttaatcctcattttgaaggactaaaatcaaatattctacatattacaaggaccaaatccaatataaat 6542400  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||||||||| |||||||||| |||||||| | |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  6542399 caattttacaaggactaaaataaaataccaaggatcaaaatcaaattttttatatttgcagggactaaaaccaaaaaaatatttttacatggactaaaac 6542300  T
Q  200 caaaatgtcagatatttgc 218  Q
    |||||| ||||||||||||    
T  6542299 caaaatatcagatatttgc 6542281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 22394364 - 22394134
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22394364 tcatattgaacttgatccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 22394265  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
     | |||||||||||||||||||||||| ||  || ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  22394264 tacttttacaaggactaaaacaaaatatcagggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 22394165  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| ||| |||||    
T  22394164 caaaatgtcagatatttgcagggacaatttt 22394134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 18786221 - 18786002
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18786221 tcatattaaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 18786122  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||| || ||||||||||  ||||||| ||||| |||||||||||   ||||| ||||    
T  18786121 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaaggactaaaaccaaaaaaatatttttatagggactaaaac 18786022  T
Q  200 caaaatgtcagatatttgcag 220  Q
    ||||||| || ||||||||||    
T  18786021 caaaatgcca-atatttgcag 18786002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 43197141 - 43196911
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||| | ||||||||| ||||||||| |||||||||    
T  43197141 tcatattaaaattggtccctataatatttattttagtcctcattttgagggactaaaattaaatattctatatattacaaagaccaaatcgaatatgaat 43197042  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaac-caattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||| || || || ||||||  |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  43197041 caattttacaaggactaaaacaaaacactaaggaccaaaactaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 43196942  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||| |  |||||||||    
T  43196941 caaaatgtcagatatttgtaaggactatttt 43196911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 7133268 - 7133501
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||    
T  7133268 tcatattgaaattgatccctataatattcattttagtcctcattttgagggagtaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 7133367  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagcc-aaacaaatatttt--tacgaggactga 196  Q
    |||||||||||||||||||| |||||||||| || ||||||| ||  |||||||||||||| ||||||| || ||| |||||||||  ||| |  | | |    
T  7133368 caattttacaaggactaaaaaaaaataccaaggaccaaaaccaaaaattttatatttgcagggactaaaaccaaaaaaaatatttttatacaaaaattaa 7133467  T
Q  197 aaccaaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||| |||||||||||| |||||||||||    
T  7133468 aaccaaaatatcagatatttgcggagactatttt 7133501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 4122817 - 4122589
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||  |||||||||||||||| |||||||||||||||||||||||||||||||    
T  4122817 tcatattgaaattggcccctataatattcattttagtcctcatttttagggtctaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 4122718  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||| |||||||  |||     | |||||||  ||||| |||     
T  4122717 caattttacaaagactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaatcaa--ttttttttttacagggactaaaat 4122620  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||| |||||||||| |||||||||    
T  4122619 caaaatgtcaaatatttgcagggactatttt 4122589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 5933365 - 5933197
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5933365 tcatattgaaatcggtccctataatattcattttagtcctcattttgaatgactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 5933266  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaa 168  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||| |||||||    
T  5933265 caattttacaaggactaaaacaaaataccaaagaccaaaaccaaatattttatatttgcagggactaaa 5933197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 15969573 - 15969780
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||||||||||| |||||||||||||||||||| |||||| |||    
T  15969573 tcatattgaaattggtccttataatattcattttagtcctcatttggaaggactaaaatcaaatattctacatattacaaggaccaaattcaatataaat 15969672  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||| ||| |||||||||||||| || ||||||| |||||||||||||||||| |||||||  |||| || |||||||||  ||||| |||     
T  15969673 caattttacaagaacttaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaatcaaaaaattatttttacagggactaaaat 15969772  T
Q  200 caaaatgt 207  Q
    ||||||||    
T  15969773 caaaatgt 15969780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 29991245 - 29991413
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| |||||||||||| ||||||||||||    
T  29991245 tcatattgaaattggtccctataatattcattttagtcctcattttaagggactaaaatcaaatattctacatactacaaggaccaattccaatatgaat 29991344  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaa 168  Q
    ||||||||||||||||||||||||||| ||| || ||||| | ||||||||||||||| || |||||||    
T  29991345 caattttacaaggactaaaacaaaatatcaaagaccaaaatcaaattttttatatttgtagggactaaa 29991413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 41137284 - 41137427
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  41137284 tcatattgaaatcggtccctataatattcattttagtcctcattttgggggactaaaatcaaatattctacatattacaagaaccaaatccaatatgaat 41137383  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa 144  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||    
T  41137384 caattttacaaggactaaaacaaaataccaaggactaaaaccaa 41137427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 29 - 230
Target Start/End: Complemental strand, 25329309 - 25329107
Alignment:
Q  29 cattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaatac 128  Q
    |||||||||||||||||||||| |||||||| |||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  25329309 cattttagtcctcattttgagggactaaaattaaatattttacatattacaaggatcaaatccaatatgaatcaattttacaaggactaaaacataatac 25329210  T
Q  129 caatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactat 227  Q
     || || ||||| | ||||||||||||||| || ||||||| | ||| | ||||||||||  | ||| ||| |||||| |||||||||||| | ||||||    
T  25329209 gaaggaccaaaatcaaattttttatatttgtagggactaaaacaaaaaatatatttttacaggaactaaaatcaaaatatcagatatttgcggggactat 25329110  T
Q  228 ttt 230  Q
    |||    
T  25329109 ttt 25329107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 7586179 - 7586315
Alignment:
Q  4 tattgaaattggtccctataatattcattttagtcct-cattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatca 102  Q
    |||||||||| |||| ||||||||||||||||||||  || ||||||  ||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  7586179 tattgaaattagtccttataatattcattttagtcccacactttgagagactaaaatcaa-tattctacatattacaaggaccaaatccaatatgaatca 7586277  T
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaa 140  Q
    ||||  ||||||||||||||||| | ||| ||||||||    
T  7586278 atttcgcaaggactaaaacaaaacaacaaggatcaaaa 7586315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 24491057 - 24491215
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   ||||||||||||||||||||||||| ||| || ||||||||| | || ||||||||||| ||||||| |    
T  24491057 atattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcagggactaaaac 24491156  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||||||||||||||||  ||||| |||||||||||||||||  |||||| ||| ||||    
T  24491157 caaacaaatatttttacagggactaaaaccaaaatgtcagattattgcagggaccattt 24491215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 72 - 230
Target Start/End: Complemental strand, 3598582 - 3598423
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||| | |||||||||||||||| || ||||||||| | || ||||||||||| ||||||| |    
T  3598582 atattatagggaccaatttcaatatgaaatgattttacaagaattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 3598483  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    |||| ||||||||||||  ||||| || |||||||||||||||||||||| ||| |||||    
T  3598482 caaaaaaatatttttacagggactaaatccaaaatgtcagatatttgcagggaccatttt 3598423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 16416105 - 16415966
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| |||||| ||  |||||||||||||||| |||| |||||| || |  |||||||||||||| || |||||||| ||||||||||||||| |||    
T  16416105 tcatatttaaattgatctatataatattcattttaatccttattttgtgggatcaaaatcaaatattctacctattacaatgaccaaatccaatataaat 16416006  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa 140  Q
    | ||||| |||||||| |||||||||| ||| || |||||    
T  16416005 ccattttgcaaggacttaaacaaaataacaaggaccaaaa 16415966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 10461559 - 10461717
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||||| ||||||| ||| || ||||||||||| ||||||| |    
T  10461559 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaatgaccaaaaccaaatattctatatttgcagggactaaaac 10461658  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| ||| ||||| | ||||||||||||| ||| ||||    
T  10461659 caaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagggaccattt 10461717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 103 - 229
Target Start/End: Original strand, 18786226 - 18786352
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||||||| || ||||||||| | || ||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||||    
T  18786226 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcag-gactaaaaccaaaaaaatatttttacagggactaaaacca 18786324  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||| | ||||||||||||| ||| ||||    
T  18786325 aaacgccagatatttgcagggaccattt 18786352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 40588890 - 40588811
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaa 80  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||||||| |||||||| |||||||| || ||||||||    
T  40588890 tcatattaaaattggtctctataatattcactttagtcctcattttgagggactaaaataaaatattctacgtattacaa 40588811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 72 - 217
Target Start/End: Complemental strand, 15969599 - 15969453
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| ||||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  15969599 atattataaggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagactaaaac 15969500  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttg 217  Q
    |||| | |||||||||   ||||| ||||||||| | || |||||||    
T  15969499 caaaaatatatttttatagggactaaaaccaaaacgccaaatatttg 15969453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 229
Target Start/End: Original strand, 43197146 - 43197273
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| |||||||  |||| |||||||||||   ||||| |||| |    
T  43197146 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaacaaaaaaatatttttatagggactaaaacaa 43197245  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    |||   ||||||||||||| ||| ||||    
T  43197246 aaacaccagatatttgcagggaccattt 43197273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 6497361 - 6497203
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||| ||||| |||||||||||||||| || ||||||| ||| || ||||||||||| |||||||      
T  6497361 atattatagggaccaatttcaatatgaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaat 6497262  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||  |||||| ||  ||||| | || |||||| ||||||| ||||    
T  6497261 caaaaaaatatttttataaggactaaattcaaaacgccaaatatttacagagaccattt 6497203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 38680570 - 38680459
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatat--tcgacatattacaaggaccaaatccaatatga 98  Q
    ||||||| |||||| || |||||||| ||||||||||||| | ||||||| |||||||||||||||  |  |||||||| ||| |  |||||||||||||    
T  38680570 tcatattaaaattgatcactataataatcattttagtccttaatttgagggactaaaatcaaatatattatacatattagaag-agaaaatccaatatga 38680472  T
Q  99 atcaattttacaa 111  Q
    || ||||||||||    
T  38680471 ataaattttacaa 38680459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 22394369 - 22394453
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatattttta 186  Q
    |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||  ||||||| ||||| |||||||||||    
T  22394369 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggactaaaaccaaaaaaatattttta 22394453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 29991271 - 29991156
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||||||  | ||||||| ||| |||||||||||||| || ||||      
T  29991271 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagaaccaaaaccaaatattttatatttgcagggattaaaat 29991172  T
Q  171 caaacaaatattttta 186  Q
    |||| |||||||||||    
T  29991171 caaaaaaatattttta 29991156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 220
Target Start/End: Complemental strand, 41137279 - 41137161
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaac-caattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||||||| || ||||||  ||| || ||||||||||  ||||||| ||||| |||||||||||   | | | ||||||    
T  41137279 attttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcaaggactaaaaccaaaaaaatatttttataggtattaaaacca 41137180  T
Q  202 aaatgtcagatatttgcag 220  Q
    ||| | |||||||||||||    
T  41137179 aaacgccagatatttgcag 41137161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 40588895 - 40588960
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttttatatttgcagcgactaaa 168  Q
    |||||||||| | |||||||||||||||| ||||||| | ||| |||||||||||||| |||||||    
T  40588895 attttacaagaattaaaacaaaataccaaggatcaaaccaaatattttatatttgcagggactaaa 40588960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 40589498 - 40589563
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttttatatttgcagcgactaaa 168  Q
    |||||||||| | |||||||||||||||| ||||||| | ||| |||||||||||||| |||||||    
T  40589498 attttacaagaattaaaacaaaataccaaggatcaaaccaaatattttatatttgcagggactaaa 40589563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 5933370 - 5933454
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatattttta 186  Q
    |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| | ||| | |||||||||    
T  5933370 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacaaaaaatatattttta 5933454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24640687 - 24640648
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcct 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  24640687 tcatattgaaattggtccctataatatttattttagtcct 24640648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 4122822 - 4122936
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    ||||||| |||| |||||||||||| ||| || ||||||||| | || ||||||| ||| ||||||| ||||| |||||||||||   ||||| ||| ||    
T  4122822 attttactaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttacagggactaaaaccaaaaaaatatttttatagggactaaaagca 4122921  T
Q  202 aaatgtcagatattt 216  Q
    ||| | |||||||||    
T  4122922 aaacgccagatattt 4122936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 14868842 - 14868740
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| || || ||||||| ||| || ||||||||||| ||||||| |    
T  14868842 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgcagtgactaaaac 14868743  T
Q  171 caa 173  Q
    |||    
T  14868742 caa 14868740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 6542473 - 6542570
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaa 168  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| ||  |||||| ||| || ||||||||||| |||||||    
T  6542473 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggactaaaaccaaatattctatatttgcagggactaaa 6542570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 8024605 - 8024727
Alignment:
Q  3 atattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatca 102  Q
    |||||||| ||||| | ||||||| || |||| ||| | ||||||||| | |||||| | | |||| || ||||| || |  |||||||||||||| ||     
T  8024605 atattgaagttggtgcttataataatcgtttttgtcgttattttgagggattaaaattacacattctacgtattataatggtcaaatccaatatgagtcg 8024704  T
Q  103 attttacaaggactaaaacaaaa 125  Q
    ||||| ||||||||| |||||||    
T  8024705 attttgcaaggactagaacaaaa 8024727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 2e-91; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 12806692 - 12806922
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  12806692 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaatgaccaaatccaatatgaat 12806791  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||| ||||| ||||    
T  12806792 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaaccaaaaaaatatttttacggggactaaaac 12806891  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||| |||||||||||| ||| |||||    
T  12806892 caaaatgttagatatttgcagggacaatttt 12806922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 18369253 - 18369023
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18369253 tcatattgagattggtccctataatattcattttagtccttattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 18369154  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| || || ||||||||||||  ||||| ||||    
T  18369153 caattttacaaggactaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaacccaaaaaatatttttacagggactaaaac 18369054  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  18369053 caaaatgtcagatatttgcagggactatttt 18369023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 10748734 - 10748504
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10748734 tcatattgaaattggtctctataatattcattttagtcctcattttgatgaactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 10748635  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||||||||||||| |||||| || ||||||| |||||||||||||||||| || |||| ||||| ||||||||||||  ||||| ||||    
T  10748634 caattttacaaggactaaaacaaagtaccaaggaccaaaaccaaattttttatatttgcagggattaaaaccaaaaaaatatttttacagggactaaaac 10748535  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||| |||||||||||||||||    
T  10748534 caaaatgtcagatgtttgcagagactatttt 10748504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 3371445 - 3371675
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  3371445 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaagaaccaaatccaatatgaat 3371544  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| | ||| ||||||||||||  ||||| ||||    
T  3371545 caattttacaaggactaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagggactaaaactaaaaaaatatttttactgggactaaaac 3371644  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||  ||||| | ||||| |||||    
T  3371645 caaaatgtcacgtatttactgagacaatttt 3371675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 42705095 - 42705325
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42705095 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 42705194  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||| |||||||||||||||| |  ||||||| |||||||||||||||||  ||||||| ||||| ||||||||||||   |||| || |    
T  42705195 caattttacaaggattaaaacaaaataccaaggtccaaaaccaaattttttatatttgcactgactaaaaccaaaaaaatatttttacagagactaaatc 42705294  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  42705295 caaaatgtcagatatttgcagggactatttt 42705325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 29683318 - 29683546
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| |||    
T  29683318 tcatattgaaattgg-ccctataatattcattttagtcctcattttgagggactaaaatcaaatattttacatattacaaggaccaaatccaatataaat 29683416  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| |||     
T  29683417 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaat 29683516  T
Q  200 caaaatgtcagatatttgcagagactattt 229  Q
    ||||||||||||||||||||| ||||||||    
T  29683517 caaaatgtcagatatttgcagggactattt 29683546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 4171668 - 4171898
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4171668 tcatattgaaattggtccctataatattcattttagtcctcattttgagagactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 4171767  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
     ||||||||||||| ||||||||| |||||| || ||||||| |||||||||||||||| | ||||||| ||||| ||||||||||||   |||| ||||    
T  4171768 taattttacaaggattaaaacaaattaccaaggaccaaaaccaaattttttatatttgctgggactaaaaccaaaaaaatatttttaccgagactaaaac 4171867  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  4171868 caaaatgtcagatatttgcagggactatttt 4171898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 14379353 - 14379123
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  14379353 tcatattgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaatgaccaaatccaatatgaat 14379254  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||| |||||||| || || ||||||| ||||||||| |||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  14379253 caattttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttacatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 14379154  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||  |||||||||    
T  14379153 caaaatgtcagatatttgcaaggactatttt 14379123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 30432835 - 30432606
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30432835 tcatattgaaattggtgcttataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 30432736  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacc 200  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||||| | ||| ||| |||||||  |||| ||||| ||||||  ||||| |||||    
T  30432735 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttgtttttacagggactaaaatcaaaaaaatacttttacagggactaaaacc 30432636  T
Q  201 aaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||||| |||||||||    
T  30432635 aaaatgtcagatatttgcagggactatttt 30432606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 28921336 - 28921566
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||| |||||  |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28921336 tcatattgaaactggtctttataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 28921435  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||| ||| || ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||  ||| | ||||    
T  28921436 caattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggattaaaac 28921535  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||| |||||||||| |||||||||    
T  28921536 caaaatgtcatatatttgcagggactatttt 28921566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 2395300 - 2395530
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2395300 tcatattgaaattgatctctataatattcattttagccctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 2395399  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||||| |||||||||| ||| || ||||| | |||||||||||||||||| || |||| | ||| ||||||||||||  ||||| ||||    
T  2395400 caattttacaaggacttaaacaaaatatcaaggaccaaaatcaaattttttatatttgcagggattaaaacaaaaaaaatatttttacagggactaaaac 2395499  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  2395500 caaaatgtcagatatttgcagggactatttt 2395530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 41594191 - 41593961
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  41594191 tcatattaaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatataaat 41594092  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||| ||||||||||||||| ||| || ||||||| |||||| |||||||||||  |||||| ||||| ||||||||||||  ||||| ||||    
T  41594091 caattttacaaagactaaaacaaaatatcaaggaccaaaaccaaattttctatatttgcaggaactaaaaccaaaaaaatatttttacagggactaaaac 41593992  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||| ||||||||||||||  ||||||||    
T  41593991 caaaatatcagatatttgcaggaactatttt 41593961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 7877564 - 7877333
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7877564 tcatattgaaattgaaccctataatatttattttagtcctcattttgagggactaaaatcaaatattcaacatattacaaggaccaaatccaatatgaat 7877465  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagcc-aaacaaatatttttacgaggactgaaa 198  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| || ||| ||||||||||||  | |||  ||    
T  7877464 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaaatatttttacaggaactacaa 7877365  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
     ||||||||  ||||||||||| |||||||||    
T  7877364 tcaaaatgtatgatatttgcagggactatttt 7877333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 3948604 - 3948374
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| |||  |||||||||||||||| |||||||||||||||||||||||||||||||    
T  3948604 tcatattgaaattggtcattataatattcattttagtcctcatttttagggtctaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 3948505  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||| ||||||| ||||| |||||||||||   ||||| |||     
T  3948504 caattttacaaggactaaaacaaaataccaaggaccgaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttatagggactaaaat 3948405  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
     |||||||||| ||||||||  |||||||||    
T  3948404 taaaatgtcaggtatttgcatggactatttt 3948374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 37609195 - 37608967
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37609195 tcatattgaaattggtcc-tataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 37609097  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||  |||||||  |||| || ||||||| |   |||| ||||    
T  37609096 caattttacaaggacaaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaaggactaaacacaaaaaattatttttccagtgactaaaac 37608997  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||| ||||||| |||| ||||    
T  37608996 caaaatgtcagat-tttgcagggactttttt 37608967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 19204735 - 19204966
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||| |||    
T  19204735 tcatattgaaattggtccctataatattcattctagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaattcaatattaat 19204834  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgact-aaagccaaacaaatatttttacgaggactgaaa 198  Q
    || ||||||||| | |||||||||||||||| || ||||||| |||||||||||||||||| |||| |||   ||| |||||||||||| |||||| |||    
T  19204835 catttttacaagtattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaataaaaaaaaatatttttacaaggactaaaa 19204934  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
    |||||||| | ||||||| ||| |||||||||    
T  19204935 ccaaaatgacggatatttacagggactatttt 19204966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 13572614 - 13572833
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13572614 tcatgttgaaattggttcttataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 13572713  T
Q  101 caattttacaaggactaaaacaaaataccaa-tgatcaaaaccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||| |||| || ||   ||| | |||||||||||||||| | ||||||| ||||| ||||||||||||  ||| | ||||    
T  13572714 caattttacaaggactaaaacaatatacaaagtgccaaaatcaaattttttatatttgctgggactaaaaccaaaaaaatatttttacagggattaaaac 13572813  T
Q  200 caaaatgtcagatatttgca 219  Q
    |||||||||| |||||||||    
T  13572814 caaaatgtcatatatttgca 13572833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 17457958 - 17457798
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17457958 tcatattgaaattggtccctataatattcattttagtccttattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 17457859  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcag 160  Q
     |||||||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||    
T  17457858 taattttacaaggactaaaacaaaatatcaaggaccaaaacctaattttttatatttgcag 17457798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 32521618 - 32521848
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| | ||| ||||||||| |||| ||||||||||    
T  32521618 tcatattgaaattggtccttataatattcattttagtcttcattttgagggactaaaatcaaatattctatatactacaaggactaaattcaatatgaat 32521717  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc-caaacaaatatttttacgaggactgaaa 198  Q
    ||||||||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||| || |||| |  ||| ||||||||||||  ||||| |||    
T  32521718 caattttacaaggacaaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggattaaaactaaaaaaaatatttttacagggactaaaa 32521817  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||  |||||||||| ||||||||    
T  32521818 ccaaaatgtcaattatttgcaga-actatttt 32521848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 33940917 - 33940691
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||| || ||||||||||| ||||    ||    
T  33940917 tcatattgaaattggtccctataatattcattttagtctttattttgagggactaaaatcaaatattctacatactaaaaggaccaaattcaat----at 33940822  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||| ||||||||||| ||| || ||||||| ||||||||||||||||||  |||||| | ||| ||||||||||||  ||||| |||     
T  33940821 caattttacaaggacaaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaactaaaaaaatatttttacagggactaaaat 33940722  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||| |||||||||||| |||||||||    
T  33940721 caaaatgtaagatatttgcagggactatttt 33940691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 6880210 - 6880039
Alignment:
Q  4 tattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaa 103  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| |||||||| |||||||||||||||||||||| ||    
T  6880210 tattgaaattggtccccataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattataaggaccaaatccaatatgaataaa 6880111  T
Q  104 ttttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaa 174  Q
    ||||||| |||||||||||||||||||| || ||||| | |||||||||||||||||| ||||||| |||||    
T  6880110 ttttacatggactaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaaccaaa 6880039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 6164138 - 6163939
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  6164138 tcatattgaaattagtccttataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaagaaccaaattcaatatgaat 6164039  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaac-caattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||  |||||||||||||||||| ||      | ||| |||||||||||| |||||| ||||    
T  6164038 caattttacaaggactaaaacaaaataccaaggaccaaaactaaattttttatatttgcagaga------caaaaaaaatatttttacaaggactaaaac 6163945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 39 - 187
Target Start/End: Complemental strand, 25318518 - 25318369
Alignment:
Q  39 ctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaa 138  Q
    |||||||| ||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||| || |||    
T  25318518 ctcattttaagggactaaaatcaaatattttacatattacaaggaccaaattcaatatgaatcaattttataaggacaaaaacaaaatatcaaggaccaa 25318419  T
Q  139 aaccaatt-ttttatatttgcagcgactaaagccaaacaaatatttttac 187  Q
    |||||||| |||||||||||| |  |||||| ||||| ||||||||||||    
T  25318418 aaccaatttttttatatttgctgaaactaaaaccaaaaaaatatttttac 25318369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38873615 - 38873710
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatat 96  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| | |||||||||||||||||||||||||    
T  38873615 tcatattgaaattggtccctataatattcattttagtcctcgttttaagggactaaaatcaaatattctagatattacaaggaccaaatccaatat 38873710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 103 - 229
Target Start/End: Original strand, 41594196 - 41594323
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaatt-ttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||| |||||| ||||||||| | |||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||||    
T  41594196 attttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 41594295  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||||||||||||||||||| ||| ||||    
T  41594296 aaatgtcagatatttgcagggaccattt 41594323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 72 - 218
Target Start/End: Original strand, 30432809 - 30432956
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| ||| ||||| | |||||||||   |||||||||||| |||||||||||| ||| || |||||||||   || ||||||||||| ||||||| |    
T  30432809 atattataagcaccaatttcaatatgaaatgattttacaaggattaaaacaaaataacaaagaccaaaaccaaaaattctatatttgcagggactaaaac 30432908  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgc 218  Q
    |||| ||||||||||||  ||||| |||||||||||||||||||||||    
T  30432909 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgc 30432956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 103 - 220
Target Start/End: Original strand, 18369258 - 18369375
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||| |||||| ||||||| ||| || ||||||||||| ||||||| ||||| |||||||||||   ||||| ||||||    
T  18369258 attttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggactaaaaccaaa-aaatatttttatagggactaaaacca 18369356  T
Q  202 aaatgtcagatatttgcag 220  Q
    ||| | |||||||||||||    
T  18369357 aaacgccagatatttgcag 18369375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 19204761 - 19204603
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  19204761 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 19204662  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||  |||||| ||| ||||| |  | |||||||||| ||| ||||    
T  19204661 caaaaaaatatttttataaggactaaaatcaaaacgctaaatatttgcagggaccattt 19204603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 3371471 - 3371326
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || |||||| || | || |||||||||||  |||||| |    
T  3371471 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcaggaactaaaac 3371372  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatattt 216  Q
    |||| ||||||||||||  ||||| ||||||||| | |||||||||    
T  3371371 caaaaaaatatttttacagggactaaaaccaaaacgccagatattt 3371326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 72 - 224
Target Start/End: Original strand, 33940891 - 33941044
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||| ||||| |||||||||||| |||||| ||||||||| | || ||||||||||| ||||||| |    
T  33940891 atattatagggaccaatttcaatatgaaatgattttataaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggactaaaac 33940990  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagac 224  Q
    |||| |||||||||||   ||||| || |||||| ||||||||| | |||||||    
T  33940991 caaaaaaatatttttaaagggactaaagccaaaacgtcagatatatccagagac 33941044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 2395295 - 2395168
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||||||||| |||||||||| ||  |||||||| | || ||||||||||| ||||||| ||||| |||||||||||   ||||| ||| ||    
T  2395295 attttacaaggactaaaataaaataccaaggactaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttatagggactaaaatca 2395196  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||| | ||||||||||||| ||| ||||    
T  2395195 aaacgccagatatttgcagtgaccattt 2395168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 103 - 229
Target Start/End: Original strand, 6880218 - 6880345
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    ||||||||| || |||||||||||||||| || ||||||||| | || ||||||||||| ||||||| ||||| |||||||||||  |||||| || |||    
T  6880218 attttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagactaaaaccaaaaaaatatttttataaggactaaatcca 6880317  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||| | |||||||||  || ||||||||    
T  6880318 aaacgccagatatttatagggactattt 6880345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 103 - 230
Target Start/End: Complemental strand, 29683313 - 29683186
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaa 202  Q
    |||||||||||| |||||||||||||||| |  |||| | ||| || ||||||||||| | ||||| ||||| |||||||||||   ||||| |||||||    
T  29683313 attttacaaggattaaaacaaaataccaagggccaaaccaaatattctatatttgcaggggctaaaaccaaaaaaatatttttatagggactaaaaccaa 29683214  T
Q  203 aatgtcagatatttgcagagactatttt 230  Q
    || | ||||||||||||| ||| |||||    
T  29683213 aacgccagatatttgcagggaccatttt 29683186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 32521644 - 32521498
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| ||||||||| | |||||||||   ||||||||| || |||||||||||||||| || ||||||| ||| |||||||||| ||  ||||||| |    
T  32521644 atattataaggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaagaccaaaaccaaatattttatatttacaaggactaaaac 32521545  T
Q  171 c-aaacaaatatttttacgaggactgaaaccaaaatgtcagatattt 216  Q
    | ||| |||||||||||  |||||| ||||||||| |||| ||||||    
T  32521544 caaaaaaaatatttttagaaggactaaaaccaaaacgtcatatattt 32521498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 103 - 230
Target Start/End: Original strand, 7877569 - 7877698
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagcc-aaacaaatatttttacgaggactgaaacc 200  Q
    |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| || ||| |||||||||||   |||||  ||||    
T  7877569 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaaatatttttatagggactagaacc 7877668  T
Q  201 aaaatgtcagatatttgcagagactatttt 230  Q
    |||| | ||||||||||||| ||| |||||    
T  7877669 aaaacgccagatatttgcagggaccatttt 7877698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 17457932 - 17458047
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaac-caattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||  ||| |||||||||||||| || |||| |    
T  17457932 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattttatatttgcagagattaaaac 17458031  T
Q  171 caaacaaatattttta 186  Q
    |||| |||||||||||    
T  17458032 caaaaaaatattttta 17458047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 28921331 - 28921205
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||||||| || ||||| | ||| || ||||||||||| ||||||| ||||| |||||||||||   ||||| | ||||    
T  28921331 attttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggactaaaaccaaa-aaatatttttatagggactaatacca 28921233  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    |||  |||||||||||||| ||| ||||    
T  28921232 aaacatcagatatttgcagggaccattt 28921205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 3948578 - 3948724
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| || |||||| | |||||||||   |||||||||||| ||||||||||||  || || ||||||| ||| || ||||||||||| ||||||| |    
T  3948578 atattataatgaccaatttcaatatgaaatgattttacaaggattaaaacaaaatataaaggaccaaaaccaaatattctatatttgcagggactaaaac 3948677  T
Q  171 caaacaaatatttttacga-ggactgaaaccaaaatgtcagatattt 216  Q
    |||| |||||||||||  | ||||| |||| |||| |||||||||||    
T  3948678 caaaaaaatatttttattagggactaaaactaaaacgtcagatattt 3948724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 14379327 - 14379485
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| ||  |||||| ||| || ||| ||||||  ||||||| |    
T  14379327 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggacaaaaaccaaatattctatttttgcaaggactaaaac 14379426  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| ||||||||| |  |||||||||||| ||| ||||    
T  14379427 caaaaaaatatttttatagggactaaaaccaaaacgcaagatatttgcagggaccattt 14379485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 25318518 - 25318656
Alignment:
Q  82 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaata 180  Q
    |||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||| | ||| || |||||||| || |||||||  |||| |||||    
T  25318518 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaatcaaatattctatatttgtagagactaaaatcaaaaaaata 25318617  T
Q  181 tttttacgaggactgaaaccaaaatgtcagatatttgca 219  Q
    ||||||   ||||| ||||||||| | ||||||||||||    
T  25318618 tttttagagggactaaaaccaaaacgccagatatttgca 25318656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 12806718 - 12806621
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaa 168  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| |||||||||| ||| || ||||||||||| |||||||    
T  12806718 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaa 12806621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 31420863 - 31420762
Alignment:
Q  6 ttgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaatt 105  Q
    ||||||| |||| || ||| |||||||||||| || ||||||||| |||  |||||||||||  |||| |||||||||| || |||||||||||| ||||    
T  31420863 ttgaaatcggtctctttaaaattcattttagttcttattttgagggactgtaatcaaatattttacatgttacaaggactaattccaatatgaataaatt 31420764  T
Q  106 tt 107  Q
    ||    
T  31420763 tt 31420762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 6164112 - 6164227
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| |||||| || | |||||||||   |||||||||||| ||||||||||||| || || ||||||| ||| || ||||||||| | ||||||| |    
T  6164112 atattataaggactaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgctgggactaaaac 6164211  T
Q  171 caaacaaatattttta 186  Q
    |||| |||||||||||    
T  6164212 caaaaaaatattttta 6164227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 13572609 - 13572483
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||||||| || ||||||| ||  || ||||||||||| |||||||  |||| |||||||||||   ||||| |||| |    
T  13572609 attttacaaggattaaaacaaaataccaaggaccaaaaccaaacattctatatttgcagggactaaa-acaaaaaaatatttttatagggactaaaacta 13572511  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||| | ||||||||||||| ||| ||||    
T  13572510 aaacgccagatatttgcagggaccattt 13572483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 219
Target Start/End: Original strand, 37609199 - 37609317
Alignment:
Q  103 attttacaaggactaaaa-caaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacc 200  Q
    |||||||||||| ||||| | ||| ||||| || ||||||||| | || ||||||||||| ||||||| ||||| |||||||||||   ||||| |||||    
T  37609199 attttacaaggattaaaaactaaaaaccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttagagggactaaaacc 37609298  T
Q  201 aaaatgtcagatatttgca 219  Q
    |||| | ||||||||||||    
T  37609299 aaaacgccagatatttgca 37609317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 4171694 - 4171597
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaa 168  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| |||||||    
T  4171694 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaaccaaatgttctatatttgcagggactaaa 4171597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 30771211 - 30771246
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttag 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  30771211 tcatattgaaattggtccctataatattcattttag 30771246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 10748718 - 10748780
Alignment:
Q  82 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaa 144  Q
    |||||| | |||||||||   |||||||||||| ||||||||||||||||||| |||||||||    
T  10748718 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaatgaccaaaaccaa 10748780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 30771237 - 30771165
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaa 144  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || |||||||||    
T  30771237 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaa 30771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 7834239 - 7834352
Alignment:
Q  19 ctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaa 118  Q
    |||||||||| |||||||| || ||| || || ||||||||||||||||  ||| |||| ||||||||||| ||||||  || |||||| ||| | ||||    
T  7834239 ctataatatttattttagttcttattgtgggg-actaaaatcaaatattttacaaattataaggaccaaattcaatatagattaattttgcaa-gtctaa 7834336  T
Q  119 aacaaaataccaatga 134  Q
    ||||||| | ||||||    
T  7834337 aacaaaacaacaatga 7834352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 38873641 - 38873538
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||| | |||||||||||||||| || ||||||| ||| || ||||||||||  ||||||| |    
T  38873641 atattatagggaccaatttcaatatgaaatgattttacaagaattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaaggactaaaac 38873542  T
Q  171 caaa 174  Q
    ||||    
T  38873541 caaa 38873538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 5e-89; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 17865119 - 17865349
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17865119 tcatattgaaaatggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 17865218  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  17865219 caattttacaaggattaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 17865318  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  17865319 caaaatgtcagatatttgcagggactatttt 17865349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 17107575 - 17107804
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17107575 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 17107674  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa-ttttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||| ||||||||||||||||||||||||| || ||||| ||| |||||||||||||||| |||||||  |||| |||||||||||| | |||| ||||    
T  17107675 caattctacaaggactaaaacaaaataccaaggaccaaaatcaatttttttatatttgcagggactaaaatcaaaaaaatatttttac-atgactaaaac 17107773  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  17107774 caaaatgtcagatatttgcagggactatttt 17107804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 26314715 - 26314486
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  26314715 tcatattgaaattggtccatataatattcattttagttctcattttgagggactaaaatcaaatattctacatactacaaggaccaaatccaatatgaat 26314616  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacc 200  Q
    ||| ||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||| ||||| ||||| ||||||  ||||| |||||    
T  26314615 caactttacaaggactaaaacaaaataccaaggaccaaaaacaattttttatatttgcagggactaaaaccaaaaaaatagttttacagggactaaaacc 26314516  T
Q  201 aaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||||| |||||||||    
T  26314515 aaaatgtcagatatttgcagggactatttt 26314486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 37815484 - 37815703
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37815484 tcatattgaaattggtccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 37815583  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagcc-aaacaaatatttttacgaggactgaaa 198  Q
    |||||||||||||||||||| |||||||||| || ||||||| |||||||||||||||||| ||||||| || ||| ||||||||||||  ||||| |||    
T  37815584 caattttacaaggactaaaataaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaaatatttttacagggactaaaa 37815683  T
Q  199 ccaaaatgtcagatatttgc 218  Q
    ||||||||||||||||||||    
T  37815684 ccaaaatgtcagatatttgc 37815703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 32592983 - 32592753
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  32592983 tcatattgatattggttcatataatattcattttagtcctcattttgagggactaaaatcaaatattctatatattacaaggaccaaatccaatatgaat 32592884  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||| ||| || ||||||| || ||||||||||||||| ||||||| ||||| |||||||||||| |||||| ||||    
T  32592883 caattttacaaggactaaaacaaaatatcaaggaccaaaaccaaaatttttatatttgcagggactaaaaccaaaaaaatatttttacaaggactaaaac 32592784  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||| |||||||||| |||||||||    
T  32592783 caaaatgtcaaatatttgcagggactatttt 32592753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 989315 - 989087
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  989315 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaattcaatatgaat 989216  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa-ttttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||||| |||||||||| ||| |||||||||||| |||||||||||| ||| ||||||| ||||| |||||||||||| |||||| ||||    
T  989215 caattttacaaggactgaaacaaaata-caaggatcaaaaccaatttttttatatttacag-gactaaaaccaaaaaaatatttttac-aggactaaaac 989119  T
Q  200 caaaatgtcagatattt-gcagagactatttt 230  Q
    ||||||||||||||||| |||| |||||||||    
T  989118 caaaatgtcagatatttggcagggactatttt 989087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 4712321 - 4712550
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| ||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4712321 tcatattgaaattggtccctataatattcattttaatcctcgttttaagagactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 4712420  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||| |||||||||||   ||||| ||||    
T  4712421 caattttacaaggattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaa-aaatatttttatagggactaaaac 4712519  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  4712520 caaaatgtcagatatttgcagggactatttt 4712550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 16960004 - 16959773
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16960004 tcatattgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 16959905  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagcc-aaacaaatatttttacgaggactgaaa 198  Q
    ||||||||||||||||||| |||||||| || || ||||||| |||||||||||||||||  ||||||| || ||| |||||||||||   ||||| |||    
T  16959904 caattttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttatatttgcatggactaaaaccaaaaaaaatatttttatagggactaaaa 16959805  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
    | |||||||||||||||||||| |||||||||    
T  16959804 ctaaaatgtcagatatttgcagggactatttt 16959773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 22487363 - 22487591
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22487363 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 22487462  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||||||  ||||||| ||||| ||| |   ||||  ||||| ||||    
T  22487463 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttcatatttgcaaggactaaaaccaaaaaaaaa--attacagggactaaaac 22487560  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||| |||||||||| |||||||||    
T  22487561 caaaatgtcaaatatttgcagggactatttt 22487591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 13493124 - 13492894
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  13493124 tcatattgaaattggtccctataatgtacattgtagtcctcattttgagggactaaaatcaaatattctacatattacaagaaccaaatccaatatgaat 13493025  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaatt-ttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||| |||||||||||||||| || ||||||||||| |||| ||||||||| ||||||| ||||| |||||||||||   ||||| ||||    
T  13493024 caattttacaaggaataaaacaaaataccaaagaccaaaaccaatttttttttatttgcagggactaaaaccaaaaaaatatttttagagggactaaaac 13492925  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||| ||||||||||||||| |||||||||    
T  13492924 caaaaagtcagatatttgcagggactatttt 13492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 16491790 - 16492019
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  16491790 tcatattgaaattggtccctatgatattcattttagtcctcattttgagggattaaaatcaaatattctacatattacaagaaccaaatccaatatgaat 16491889  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa-ttttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||  | ||||| | ||| ||||||||||||  ||| | ||||    
T  16491890 caattttacaaggactaaaacaaaataccaaggaccaaaaccaatttttttatatttgca-aggctaaaactaaaaaaatatttttacagggattaaaac 16491988  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  16491989 caaaatgtcagatatttgcagtgactatttt 16492019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 13683147 - 13683370
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  13683147 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattataaggaccaaatccaatatgaat 13683246  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||||||||        |||||| ||||| ||||||||||||  ||||| |||     
T  13683247 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatat-------aactaaaaccaaaaaaatatttttacagggactaaaat 13683339  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  13683340 caaaatgtcagatatttgcagggactatttt 13683370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 12792812 - 12792595
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  12792812 tcatattgaaattggtcactataatattcattttagtcctcattttgagggactaaaatcaaatattctacatgttacaaggaccaaatctaatatgaat 12792713  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||| |||||||||||| ||| || ||||| | |||||||||||||||||| |||||||  |||| ||||||||||||  ||||| ||||    
T  12792712 caattttacaaggattaaaacaaaatatcaaggaccaaaatcaaattttttatatttgcagggactaaaatcaaaaaaatatttttacagggactaaaac 12792613  T
Q  200 caaaatgtcagatatttg 217  Q
    ||||||| ||||||||||    
T  12792612 caaaatgacagatatttg 12792595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 43750090 - 43750318
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||     
T  43750090 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaataaaatattctacatattacaaggaccaaatccaatatgaaa 43750189  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||||||   ||| ||| |   |||| | |||| ||||    
T  43750190 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaataaaaaaaaaa--attacaatgactaaaac 43750287  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||| | ||||||||||| |||||||||    
T  43750288 caaaatgacggatatttgcagggactatttt 43750318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 11021816 - 11022030
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11021816 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 11021915  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||| ||||||||||||||||| | || ||||| | ||||||||||||||| |  ||||||| ||||| ||||||||||||  ||| | ||||    
T  11021916 caattttacaaagactaaaacaaaataccgaggaccaaaatcaaattttttatatttgtaaggactaaaaccaaaaaaatatttttacatggattaaaac 11022015  T
Q  200 caaaatgtcagatat 214  Q
     ||||| ||||||||    
T  11022016 gaaaatatcagatat 11022030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 46481060 - 46481219
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46481060 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 46481159  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgca 159  Q
    ||||||||||||||||||||||||||||||| || || |||| |||||||||||||||||    
T  46481160 caattttacaaggactaaaacaaaataccaaggaccataaccaaattttttatatttgca 46481219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 5721095 - 5721254
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||      
T  5721095 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaataaaatattctacatattacaaggaccaaatccaatatgatc 5721194  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa--ccaattttttatatttgc 158  Q
    |||||||||||||||||||||||||||||||||| |||||  | ||||||||||||||||    
T  5721195 caattttacaaggactaaaacaaaataccaatgaccaaaaaccaaattttttatatttgc 5721254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 2184634 - 2184461
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||| ||||| |||||| || |||||||||||||||    
T  2184634 tcatattgaaattggtccatataatattcattttagtcctcatattgagggtctaaaatcaaatattctacatactacaagaacaaaatccaatatgaat 2184535  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaa 174  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||||||| ||||||| |||||    
T  2184534 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttaatatttgcag-gactaaaaccaaa 2184461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 20045945 - 20046113
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  20045945 tcatattgaaattggcctctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattacaaggaccaaatccaatataaat 20046044  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaa 168  Q
    |||||||||||| |||||||||||||| ||| || ||||||| |||||||||||||  ||| |||||||    
T  20046045 caattttacaagaactaaaacaaaatagcaaggaccaaaaccaaattttttatattgacagggactaaa 20046113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 9301809 - 9301582
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  9301809 tcatattgatattggtccgtataatattcattttagtcctcattttgagg-actaaaataaaatattctacatattacaatgaccaaatccaatatgaat 9301711  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
     |||||||||||||||||||||||||  ||| || ||||||| |||||||||| |||| || |||||||   ||| ||||||||||||   |||| |||     
T  9301710 taattttacaaggactaaaacaaaatttcaaggaccaaaaccaaattttttatgtttgaagggactaaaattaaaaaaatatttttacagagact-aaat 9301612  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||  |||||||||||| |||||||||    
T  9301611 caaaatgatagatatttgcag-gactatttt 9301582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 39385401 - 39385287
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  39385401 tcatattgaaattggtccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattacaagtatcaaatccaatatgaat 39385302  T
Q  101 caattttacaaggac 115  Q
    |||||||||||||||    
T  39385301 caattttacaaggac 39385287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 1106527 - 1106401
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||  |||||||||||||||| || | ||||| ||  ||||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  1106527 tcatattgaaattggtcattataatattcattttattcattattttaagagactaaaatcaaatattctacatattacaaagaccgaatccaatatgaat 1106428  T
Q  101 caattttacaaggactaaaacaaaata 127  Q
    |||||||  ||||||||||||||||||    
T  1106427 caattttgtaaggactaaaacaaaata 1106401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 46081614 - 46081522
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaa 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| |||| ||||    
T  46081614 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattgcaaggatcaaaaccaa 46081522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 989289 - 989447
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||||| | || ||||| ||||| ||||||| |    
T  989289 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaaccaaatattctatatctgcagggactaaaac 989388  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| ||||||||| ||||||||||||||| ||| ||||    
T  989389 caaaaaaatatttttatagggactaaaaccaaaacgtcagatatttgcagggaccattt 989447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 13683173 - 13683024
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||| ||||||||||| || ||||||||| | || ||||||| ||| ||||||| |    
T  13683173 atattatagggaccaatttcaatatgaaatgattttacaaggattaaagcaaaataccaaggaccaaaaccaaatattctatatttacagggactaaaac 13683074  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcag 220  Q
    |||| |||||||||||   ||||| |||||||||||||||||||||||||    
T  13683073 caaaaaaatatttttatagggactaaaaccaaaatgtcagatatttgcag 13683024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 5721121 - 5720964
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  5721121 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 5721022  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| ||||||||| | ||||||||||||| ||| ||||    
T  5721021 caaa-aaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccattt 5720964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 2184608 - 2184767
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  2184608 atattatatggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 2184707  T
Q  171 caaacaaatatttttacgagg--actgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||  |||  ||| ||||||||| ||||||||||||||| ||| ||||    
T  2184708 caaaaaaatattttta-taggacactaaaaccaaaacgtcagatatttgcagggaccattt 2184767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 72 - 230
Target Start/End: Complemental strand, 11021842 - 11021683
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| |||||||||||||| ||| |||      
T  11021842 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattttatatttgcagggaccaaaat 11021743  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    |||| |||||||||||   ||||| ||||||||| | |||||||||| || ||| |||||    
T  11021742 caaaaaaatatttttatagggactaaaaccaaaacgccagatatttgtagggaccatttt 11021683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 72 - 218
Target Start/End: Complemental strand, 22487389 - 22487242
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| |||||||      
T  22487389 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagactaaaaa 22487290  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgc 218  Q
    |||| |||||||||||  |||||| |||||||||   |||||||||||    
T  22487289 caaaaaaatatttttataaggactaaaaccaaaacaccagatatttgc 22487242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 16959978 - 16960136
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| || |||||||||| ||| || ||| ||||||  ||||||| |    
T  16959978 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggatcaaaaccaaatattctatttttgcaaggactaaaac 16960077  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| |||||||||||  |||||||||||| ||| ||||    
T  16960078 caaaaaaatatttttatagggactaaaaccaaaatgcaagatatttgcagggaccattt 16960136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 37815510 - 37815352
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||  ||||||| |    
T  37815510 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggactaaaac 37815411  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| || |||||||| ||||||||| ||| ||| ||||    
T  37815410 caaaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccattt 37815352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 697 - 741
Target Start/End: Original strand, 21354929 - 21354973
Alignment:
Q  697 taattttgaacgcagtaagaaaaactatcgagtaatcgataattc 741  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  21354929 taattttgaacgcagtaagaaaaactatcgagtaatcgataattc 21354973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 49097772 - 49097664
Alignment:
Q  32 tttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaa 131  Q
    |||| |||| |||||||||  |||||||||| || |   ||||||| |||||||||||||||| ||||| | |||||||||||||||||||||| | |||    
T  49097772 tttaatccttattttgaggagctaaaatcaattaatatgcatattaaaaggaccaaatccaatgtgaataagttttacaaggactaaaacaaaacaacaa 49097673  T
Q  132 tgatcaaaa 140  Q
     ||||||||    
T  49097672 ggatcaaaa 49097664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 218
Target Start/End: Original strand, 26314689 - 26314836
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||  ||| |||||||||||||||| |||| ||||||| | || ||||||||||| ||||||| |    
T  26314689 atattatatggaccaatttcaatatgaaatgattttacgtggattaaaacaaaataccaaggatctaaaccaaatattctatatttgcagggactaaaac 26314788  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgc 218  Q
    |||| |||||||||||   ||| | ||||||||| | |||||||||||    
T  26314789 caaaaaaatatttttatagggattaaaaccaaaacgccagatatttgc 26314836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 43750116 - 43750001
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||| ||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  43750116 atattatagggaccaatttcaatatgaaatgattttacaaggattaaagcaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 43750017  T
Q  171 caaacaaatattttta 186  Q
    |||| |||||||||||    
T  43750016 caaaaaaatattttta 43750001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 17107601 - 17107443
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   ||| |||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  17107601 atattatagggaccaatttcaatatgaaatgattgtacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 17107502  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| ||||||||| ||  ||||| |||| |||| | || |||||| ||| ||| ||||    
T  17107501 caaaaaaatattttaacagggactaaaactaaaacgccaaatattttcagggaccattt 17107443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 204
Target Start/End: Complemental strand, 17865114 - 17865012
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||| ||| || ||||||||| | || ||||||||||| ||||||| ||||| |||||||||||   ||||| ||||||    
T  17865114 attttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttatatggactaaaacca 17865015  T
Q  202 aaa 204  Q
    |||    
T  17865014 aaa 17865012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 42239370 - 42239446
Alignment:
Q  154 tttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    ||||||| ||||||| ||||| ||||||||||||   |||| |||| |||||||||||||||||||| |||||||||    
T  42239370 tttgcagggactaaaaccaaaaaaatatttttacagagactaaaactaaaatgtcagatatttgcagggactatttt 42239446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 12792796 - 12792883
Alignment:
Q  82 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaa 168  Q
    |||||| | |||||||||  ||||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| |||||||    
T  12792796 gaccaatttcaatatgaaataattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaa 12792883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 218
Target Start/End: Original strand, 46081588 - 46081735
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || |||||||||||  |||||| |    
T  46081588 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagaaactaaaac 46081687  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgc 218  Q
     ||| | ||||| | |  |||| | ||||||||| |||||||||||||    
T  46081688 aaaaaatatattctcataaggattaaaaccaaaacgtcagatatttgc 46081735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 639 - 680
Target Start/End: Original strand, 21354851 - 21354892
Alignment:
Q  639 ttgcattatccatgcctacaaagtagtgatgaattttaatcc 680  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  21354851 ttgcattatccatgcctacaaagtagtaatgaattttaatcc 21354892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 9301814 - 9301898
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatattttta 186  Q
    |||||||||||| |||||||||||||||| || ||||| | ||| || ||||||||||  ||||||| ||||| |||||||||||    
T  9301814 attttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcatggactaaaaccaaaaaaatattttta 9301898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 14180435 - 14180536
Alignment:
Q  22 taatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaac 121  Q
    |||||||||||||||| || |||||||| |  |||||||||||| || ||| |||||| ||||||| |  || |||||| |||||| |||||||| ||||    
T  14180435 taatattcattttagttcttattttgagat--taaaatcaaatactccacaaattacagggaccaatttaaacatgaataaattttgcaaggactcaaac 14180532  T
Q  122 aaaa 125  Q
    ||||    
T  14180533 aaaa 14180536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 39385279 - 39385192
Alignment:
Q  143 aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||   || | || ||||||||||| ||||||| || ||| |||||    
T  39385279 aattttttatatttgcagggactaaaaccaaaaaaatatttttacagagattaaatccaaaatgtcatatatttggagggacgatttt 39385192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 217
Target Start/End: Original strand, 39385375 - 39385522
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||| ||||||| ||  |||||| ||| |||||||||||||| ||||||| |    
T  39385375 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaatataccaaagacaaaaaccaaatattttatatttgcagggactaaaac 39385474  T
Q  171 caaacaa-atatttttacgaggactgaaaccaaaatgtcagatatttg 217  Q
     ||| || |||||||||   ||| | ||| ||||| ||||||||||||    
T  39385475 aaaataatatatttttatagggattaaaagcaaaacgtcagatatttg 39385522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 13493130 - 13493200
Alignment:
Q  104 ttttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaa 173  Q
    ||||||||||| |||||||||||||||  |||||||||| ||| || ||||||||||| ||||||| ||||    
T  13493130 ttttacaaggattaaaacaaaataccatggatcaaaaccaaatattctatatttgcagggactaaaaccaa 13493200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 16491807 - 16491701
Alignment:
Q  81 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaat 179  Q
    ||||||| | |||||||||   |||||| ||||| ||||| |||||||||| || ||||||||| | || ||||||||||| || |||| ||||| ||||    
T  16491807 ggaccaatttcaatatgaaatgattttataaggattaaaataaaataccaaggaccaaaaccaaatattctatatttgcagggattaaaaccaaaaaaat 16491708  T
Q  180 attttta 186  Q
    |||||||    
T  16491707 attttta 16491701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 46081533 - 46081436
Alignment:
Q  133 gatcaaaaccaatttttt-atatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||  |||| |||||||||| ||| ||| ||||| |||||||||||   ||||| |||| ||||||||||||||||| || |||||||||    
T  46081533 gatcaaaaccaaaattttcatatttgcagggacaaaa-ccaaaaaaatatttttatagggactaaaacaaaaatgtcagatatttggagggactatttt 46081436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 2184475 - 2184434
Alignment:
Q  189 aggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    |||||| ||||||||||||||||||||||||||| |||||||    
T  2184475 aggactaaaaccaaaatgtcagatatttgcagaggctatttt 2184434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 46481086 - 46480983
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   ||||||||| || |||||||||||||||| || ||||||| ||| || |||||||| || ||||||| |    
T  46481086 atattatagggaccaatttcaatatgaaatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtagggactaaaac 46480987  T
Q  171 caaa 174  Q
    ||||    
T  46480986 caaa 46480983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 28306919 - 28307013
Alignment:
Q  26 attcattttagtcctcattttgaggtactaaaatcaaatattcgacatatta-caaggaccaaatccaatatgaatcaattttacaaggactaaa 119  Q
    ||||||||||||||| |||||||||   |||||||||||||||  |||||||  ||| || ||||||||| | |||||| ||| ||| |||||||    
T  28306919 attcattttagtccttattttgaggggttaaaatcaaatattctgcatattataaagaactaaatccaatgtaaatcaagtttgcaaagactaaa 28307013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 38050982 - 38050872
Alignment:
Q  3 atattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatca 102  Q
    ||||| |||||| | ||||| |||||||||||| |||| ||||| ||  | ||||||||||||||  | ||||||| ||||  ||||||||  |||| ||    
T  38050982 atattaaaattgcttcctatgatattcattttaatccttattttaagagattaaaatcaaatattatatatattacgaggatgaaatccaaattgaacca 38050883  T
Q  103 attttacaagg 113  Q
    ||||| |||||    
T  38050882 attttgcaagg 38050872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 7973738 - 7973803
Alignment:
Q  3 atattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattc 68  Q
    ||||||||||||||| || | | |||||||| |||| | ||||| ||| |||||||||||||||||    
T  7973738 atattgaaattggtcactgttaaattcatttgagtctttattttaagggactaaaatcaaatattc 7973803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 440 - 493
Target Start/End: Original strand, 51108814 - 51108866
Alignment:
Q  440 aaattttgactcattgccttataattttgtttgcacattctcgagcactaccaa 493  Q
    |||||| ||||||||||||| | |||||||| |||||||||||| |||||||||    
T  51108814 aaatttcgactcattgcctt-tgattttgttagcacattctcgaccactaccaa 51108866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 167; Significance: 5e-89; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 42093635 - 42093405
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  42093635 tcatattgaaattggtcccaataatattcattttagtcctcattttgagggactaaaatcaaatattctacgtattacaaggaccaaatccaatatgaat 42093536  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| || |    
T  42093535 caattttacaaggactaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagagactaaaaccaaaaaaatatttttacagggactaaatc 42093436  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||| | ||||||||||||    
T  42093435 caaaatgtcagatattaggagagactatttt 42093405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 17110091 - 17109861
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | |  |||||||||||||||| |||||||||||||||||||||||||||||||    
T  17110091 tcatattgaaattggtctctataatattcattttagtcctcatttttacggtctaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 17109992  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||  |||||| ||||| |||||||||||| |||| | ||||    
T  17109991 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaggcactaaaaccaaaaaaatatttttacaaggattaaaac 17109892  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  17109891 caaaatgtcagatatttgcagggactatttt 17109861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 32315616 - 32315386
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32315616 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 32315517  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    || |||||||||||||||||||||||||||| || ||||||| |||||| ||||||||||  |||||||  |||| ||||||||||||   |||| ||||    
T  32315516 cacttttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgcaaggactaaaatcaaaaaaatatttttacagagactaaaac 32315417  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  32315416 caaaatgtcagatatttgcagggactatttt 32315386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 29838534 - 29838304
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  29838534 tcatattgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggactaaatccaatatgaat 29838435  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||||||||||||||||| || || ||||||| |||||||||||||||||| ||||||| | ||| |||||||||| |  ||||| ||||    
T  29838434 caattttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttgcagagactaaaacgaaaaaaatatttttgcagggactaaaac 29838335  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||| |||||||||||||| |||||||||    
T  29838334 caaaatatcagatatttgcagggactatttt 29838304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 49499986 - 49500216
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  49499986 tcatattgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatataaat 49500085  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||  ||||||| ||||| ||||||||||||  ||||| ||||    
T  49500086 caattttacaaggattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaaggactaaaaccaaaaaaatatttttacagggactaaaac 49500185  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||| ||| |||||||||| |||||||||    
T  49500186 caaaatatcaaatatttgcagggactatttt 49500216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 50645615 - 50645845
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  50645615 tcatattgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 50645714  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||| |||||||| || || ||||||| |||||||||||||||||| ||||||| ||||| |||||||||||   ||||| ||||    
T  50645715 caattttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttatagggactaaaac 50645814  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
     |||||||||||||||| ||| |||||||||    
T  50645815 taaaatgtcagatatttacagggactatttt 50645845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 52835688 - 52835918
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  52835688 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 52835787  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaa-atatttttacgaggactgaaa 198  Q
    |||||||||||||||||||||||||||| || || ||||||| |||||||||||||||||| |||||||   ||| || |||||||||| |||||| |||    
T  52835788 caattttacaaggactaaaacaaaatacgaaggaccaaaaccaaattttttatatttgcagggactaaaataaaaaaatatatttttac-aggactaaaa 52835886  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
    |||||||| | ||||||||||| |||||||||    
T  52835887 ccaaaatgacggatatttgcagggactatttt 52835918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 14546076 - 14545845
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || ||||||||||| || ||||||||||||||||    
T  14546076 tcatattgaaattggtccctataatattcattttagttctcattttgagggactaaaatcaaatactctacatattacaaagatcaaatccaatatgaat 14545977  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa--ttttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaa 198  Q
    ||||||||||||||||||||||||||||||| || |||||||||  |||||||||||||||| |||||||  |||| ||||| ||||||  ||||| |||    
T  14545976 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttttatatttgcagggactaaaatcaaaaaaatacttttacatggactaaaa 14545877  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||||||  |||||||||    
T  14545876 ccaaaatgtcagatatttgcaaggactatttt 14545845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 26582852 - 26582623
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  26582852 tcatattgaaattggtccctataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattacaatgaccaaatccaatatgaat 26582753  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||| ||| || ||||||| |||||| ||||||||||| ||||||  ||||  ||||||||||||  ||||| ||||    
T  26582752 caattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttctatatttgcag-gactaacaccaacaaaatatttttacagggactaaaac 26582654  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||| |||||||||||| |||||||||||    
T  26582653 caaaatatcagatatttgcggagactatttt 26582623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 27934594 - 27934824
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||| |||    
T  27934594 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccgaatccaatataaat 27934693  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaattt-tttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||| ||| || |||||||||    ||||||||| ||| |||||||  |||| ||||||||||||  ||||| ||||    
T  27934694 caattttacaaggactaaaacaaaataacaaggaccaaaaccaaaaaatttatatttacagggactaaaatcaaaaaaatatttttactgggactaaaac 27934793  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    || |||||||||||||||||| |||||||||    
T  27934794 cagaatgtcagatatttgcagggactatttt 27934824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 46962822 - 46962592
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||  ||||||||||||||    
T  46962822 tcatattgaaattgatccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaagaactgaatccaatatgaat 46962723  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||| |||||||||||||||| ||| || ||||||| |||||||||||||||||| ||||||| ||||| || | |||||||  ||||| ||||    
T  46962722 caattttacagggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaattttttttacagggactaaaac 46962623  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||| |||||||||||||| |||||||||    
T  46962622 caaaatatcagatatttgcagggactatttt 46962592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 38807681 - 38807910
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||  |||||||||||||||||||||||||||||||    
T  38807681 tcatattgaaattggtccctataatattcattttagtcctcattttgagggacaaaaatcaaatattttacatattacaaggaccaaatccaatatgaat 38807780  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||| ||| |||||||| |||||||  | || ||||||| |||||||||||||||||| ||||||| ||||||| ||||||||||  ||||| |||     
T  38807781 caatttttcaaagactaaaataaaatacagaggaccaaaaccaaattttttatatttgcagggactaaaaccaaacatatatttttacagggactaaaat 38807880  T
Q  200 caaaatgtcagatatttgcagagactattt 229  Q
    ||||||||||||||||| ||| ||||||||    
T  38807881 caaaatgtcagatatttacagggactattt 38807910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 55092350 - 55092580
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||||    
T  55092350 tcatattgaaattggtctctataatattcattttagtcctcattttgagggactaaaatcaaatattctatatattacaaggactaaatccaatatgaat 55092449  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||| || |||||||| ||||||| || ||||| | |||||||||||||||||| ||||||| ||||| ||||||||||||   || | ||||    
T  55092450 caattttacaatgattaaaacaatataccaaggaccaaaatcaaattttttatatttgcagagactaaaaccaaaaaaatatttttacagagaataaaac 55092549  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||| || |||||||||    
T  55092550 caaaatgtcagatatttggagggactatttt 55092580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 33162560 - 33162387
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||    
T  33162560 tcatattgaaattggtccgtataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 33162461  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaa 173  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||  |||||||| ||||||| ||||    
T  33162460 caattttacaaggactaaaacaaaataccaaggatcaaaaccaaatttttttaatttgcagggactaaaaccaa 33162387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 27285113 - 27285307
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||    
T  27285113 tcatattgaaattggtctctata-tattcattttagtcctcattttgaggtactaaaatcaaatattctagatattataaggaccaaatccaatatgaat 27285211  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactga 196  Q
    ||||||||||| ||||||||||||||| |||||| ||||||| || ||||||||||||||| |||||||  |||| ||||||||||||  |||||||    
T  27285212 caattttacaaagactaaaacaaaatatcaatgaccaaaaccaaactttttatatttgcagggactaaa-acaaaaaaatatttttacagggactga 27285307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 49121859 - 49122002
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  49121859 tcatattgaaattggtccctataatattcactttagtcctcattttgagggactaaaatcaaatattctacatattataaggaccaaatccaatatgaat 49121958  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa 144  Q
    |||||||||||  |||||||||||| ||||| ||||||||||||    
T  49121959 caattttacaaaaactaaaacaaaacaccaaggatcaaaaccaa 49122002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 16056491 - 16056617
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||  |    
T  16056491 tcatattgaaattggtccctataatattcattttagtccttattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgtgt 16056590  T
Q  101 caattttacaaggactaaaacaaaata 127  Q
    ||||||||||| |||||||||||||||    
T  16056591 caattttacaatgactaaaacaaaata 16056617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 44 - 187
Target Start/End: Complemental strand, 889325 - 889181
Alignment:
Q  44 tttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc- 142  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||     
T  889325 tttgaggcactaaaatcaaatattctacatattataaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaacca 889226  T
Q  143 aattttttatatttgcagcgactaaagccaaacaaatatttttac 187  Q
    |||||||||||||| | |  |||||| ||||| | ||||||||||    
T  889225 aattttttatatttacgggaactaaaaccaaaaatatatttttac 889181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 7029528 - 7029632
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||  | ||||||||||||||| |||||||||||||||||||||||||||||||    
T  7029528 tcatattgaaattgatccctataatattcaatttagtcctcattttgagaaattaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 7029627  T
Q  101 caatt 105  Q
    |||||    
T  7029628 caatt 7029632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 14546050 - 14546208
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| || || ||||||||| | || ||||||||||| ||||||| |    
T  14546050 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgcagggactaaaac 14546149  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
      || ||||||||||||   |||||||||||||||||||||||||||||| ||| ||||    
T  14546150 tcaaaaaatatttttacagtgactgaaaccaaaatgtcagatatttgcagggaccattt 14546208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 26582826 - 26582984
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||| ||| | || ||||||||||| |||||||      
T  26582826 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggactaaaat 26582925  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| ||||||||||||  ||||| ||| ||||||||||||||||||||| ||| ||||    
T  26582926 caaaaaaatatttttacagggactaaaatcaaaatgtcagatatttgcagggaccattt 26582984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 27934620 - 27934462
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || |||||||| || ||||||| |    
T  27934620 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgaagggactaaaac 27934521  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| ||||||||| | ||||||||||||| ||| ||||    
T  27934520 caaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccattt 27934462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 52835714 - 52835556
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  52835714 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 52835615  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| ||| ||||| | ||||||||||||| ||| ||||    
T  52835614 caaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagggaccattt 52835556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 16056517 - 16056369
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||| |||||| ||||||| ||| || ||||||||||| ||||||| |    
T  16056517 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggactaaaac 16056418  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcag 220  Q
    |||| |||||||||||   ||||| ||||||||| | |||||||||||||    
T  16056417 caaa-aaatatttttatagggactaaaaccaaaacgccagatatttgcag 16056369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 82 - 229
Target Start/End: Complemental strand, 27285129 - 27284981
Alignment:
Q  82 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaata 180  Q
    |||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||||| | || ||||||||||| ||||||| ||||| |||||    
T  27285129 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaata 27285030  T
Q  181 tttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    ||||||   | ||| ||| ||||||| ||||||||||||| ||| ||||    
T  27285029 tttttataggaactaaaatcaaaatgccagatatttgcagggaccattt 27284981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 72 - 230
Target Start/End: Complemental strand, 38807707 - 38807548
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| | |||||||||||||| || ||||||||| | || ||||||||||| ||||||| |    
T  38807707 atattatagggaccaatttcaatatgaaatgattttacaaggattgaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 38807608  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    |||| |||||||||||  ||| || ||||||||| | ||||||||| ||| ||| |||||    
T  38807607 caaaaaaatatttttataagggctaaaaccaaaacgccagatatttacagggaccatttt 38807548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 72 - 219
Target Start/End: Complemental strand, 49500012 - 49499864
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  49500012 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcagggactaaaac 49499913  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgca 219  Q
    | || |||||||||||   ||||| |||||||||   ||||||||||||    
T  49499912 ccaaaaaatatttttatagggactaaaaccaaaacaccagatatttgca 49499864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 32315590 - 32315747
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   ||||||||| || |||||||||||||||| || ||||||||| | || |||||||| |  | ||||| |    
T  32315590 atattatagggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtatggcctaaaac 32315689  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| ||||||||||||  ||||| |||||||||| |||||||||||||| ||| ||||    
T  32315690 caaa-aaatatttttacagggactaaaaccaaaatatcagatatttgcagggaccattt 32315747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 39062686 - 39062613
Alignment:
Q  52 actaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaa 125  Q
    ||||||||||||||||| ||||||||||| |||| ||| |||||| |||||||||| ||||||||||| |||||    
T  39062686 actaaaatcaaatattctacatattacaatgaccgaattcaatataaatcaattttgcaaggactaaaccaaaa 39062613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 229
Target Start/End: Original strand, 46962827 - 46962954
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| ||||||||||||||||  | ||||||||| | || ||||||||||| || |||| ||||| |||||||||||   ||||| ||||||    
T  46962827 attttacaaggattaaaacaaaataccaagaaccaaaaccaaatattctatatttgcagggattaaaaccaaaaaaatatttttatagggactaaaacca 46962926  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    | | | ||||||||||||| ||| ||||    
T  46962927 atacgccagatatttgcagggaccattt 46962954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 220
Target Start/End: Complemental strand, 7029523 - 7029405
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||||| | || ||||||||| | || ||||||||||| ||||||| ||||| |||||||||||   |||||  ||| |    
T  7029523 attttacaaggattaaaacaaaataccgaagaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttatagggactagaacaa 7029424  T
Q  202 aaatgtcagatatttgcag 220  Q
    ||| | |||||||||||||    
T  7029423 aaacgccagatatttgcag 7029405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 29838508 - 29838666
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaac-caattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||  ||| || ||| ||||||  ||||||| |    
T  29838508 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatttttgcaaggactaaaac 29838607  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| ||||||||| |  |||||||||||| ||| ||||    
T  29838608 caaaaaaatatttttatatggactaaaaccaaaacgcaagatatttgcagggaccattt 29838666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 50645641 - 50645483
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| || |||||||||| ||| || ||| ||||||  ||||||| |    
T  50645641 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggatcaaaaccaaatattctatttttgcaaggactaaaac 50645542  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   | ||| ||||||||| |  |||||||||||| ||| ||||    
T  50645541 caaaaaaatatttttataggaactaaaaccaaaacgcaagatatttgcagggaccattt 50645483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 33162534 - 33162679
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||| |||||||| ||| || ||||||||| | || ||||||||||  ||||||| |    
T  33162534 atattatacggaccaatttcaatatgaaatgattttacaaggattaacacaaaatatcaaggaccaaaaccaaatattctatatttgcaaggactaaaac 33162633  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatattt 216  Q
    |||| |||||||||||   ||||| |||| |||| |||||||||||    
T  33162634 caaaaaaatatttttatagggactaaaactaaaacgtcagatattt 33162679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 49121885 - 49121726
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaac-caattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||  |||||||||| || |||||||||||| ||| || ||||||  ||| |||||||||||||  ||||||| |    
T  49121885 atattatagggaccaatttcaatatgaaataattttacaatgattaaaacaaaatatcaaggaccaaaactaaatattttatatttgcatggactaaaac 49121786  T
Q  171 caaacaaa-tatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| ||| ||||||||   || || ||| ||||||| ||||||||||||| ||| ||||    
T  49121785 caaaaaaagtatttttataggggctaaaatcaaaatgccagatatttgcagggaccattt 49121726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 229
Target Start/End: Original strand, 21323133 - 21323260
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||| ||||| |||||||||||||||| ||| |||||| ||| || ||||||||||| ||||||| ||||| ||| |  ||||   ||||| ||||||    
T  21323133 attttataaggattaaaacaaaataccaaggattaaaaccaaatattctatatttgcagggactaaaaccaaaaaaaaaaatttatagggactaaaacca 21323232  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||| |  |||||||||||| ||| ||||    
T  21323233 aaacgctagatatttgcagggaccattt 21323260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 42093618 - 42093766
Alignment:
Q  81 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaat 179  Q
    ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||| | ||| || ||||||||||| || ||||  |||| ||||    
T  42093618 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggattaaaaacaaaaaaat 42093717  T
Q  180 atttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    | |||||   ||||| ||| ||||| | ||||||||||||| ||| ||||    
T  42093718 a-ttttatagggactaaaatcaaaacgccagatatttgcagggaccattt 42093766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 5e-89; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 20062038 - 20061808
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20062038 tcatattgaaattggtccctataatattcattttagtcatcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 20061939  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||| |||||||||||||||| || ||||| | |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  20061938 caattttacaaggagtaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 20061839  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  20061838 caaaatgtcagatatttgcagggactatttt 20061808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 28031790 - 28032020
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28031790 tcatattgaaattggtccttataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 28031889  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| || ||||||||||||||| ||||||| | ||| ||||||||||||  ||||| ||||    
T  28031890 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaac 28031989  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  28031990 caaaatgtcagatatttgcagggactatttt 28032020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 43191896 - 43191666
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  43191896 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaagaccaaatccaatatgaat 43191797  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaatt-ttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  43191796 caattttacaaggactaaaacaaaataccaaggaccaaaaccaatttttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 43191697  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
     ||||| |||||||||||||| ||| |||||    
T  43191696 taaaatatcagatatttgcagggacaatttt 43191666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 50096278 - 50096506
Alignment:
Q  3 atattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatca 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  50096278 atattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaattcaatatgaatca 50096377  T
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    ||||||||||||||||||||||||||||| || ||||||| |||||| |||||||| || ||||||| ||||| || |||||||||  ||||  ||||||    
T  50096378 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgtagggactaaaaccaaaaaattatttttacacggacctaaacca 50096477  T
Q  202 aaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||| |||||||||    
T  50096478 aaatgtcagatatttgcagggactatttt 50096506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 26244692 - 26244922
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||    
T  26244692 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaattaaatattctacatattacaaggaccaaatccaatatgaat 26244791  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||| |||||||  |||| |||||||||| |  ||| | ||||    
T  26244792 caattttacaatgactaaaacaaaataccaaggatcaaaaccaaattttctatatttgcagggactaaaatcaaaaaaatattttttcagggattaaaac 26244891  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||||||  ||||||||    
T  26244892 caaaatgtcagatatttgcaggaactatttt 26244922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 37172488 - 37172258
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37172488 tcatattaatattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 37172389  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||| |||||||||||||||| |||||||| | ||||||||||||||| || |||||||  |||| | ||||||||||  ||||| ||||    
T  37172388 caattttacaaggattaaaacaaaataccaaggatcaaaatcaaattttttatatttgaagggactaaaatcaaaaatatatttttacagggactaaaac 37172289  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||| |||||||||||||||||||||||    
T  37172288 caaaatgacagatatttgcagagactatttt 37172258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 33700 - 33930
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  33700 tcatattgaaaatggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggacaaaatccaatatgaat 33799  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||||||||| |||||||||| || ||||||| |||||||||||||| ||| || |||| ||||| ||||||||||||  ||||| ||||    
T  33800 caattttacaaggactaaaataaaataccaaggaccaaaaccaaattttttatatttacagagaataaaaccaaaaaaatatttttacagggactaaaac 33899  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||| ||||| ||||||    
T  33900 caaaatgtcagatatttgtagagattatttt 33930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 10913917 - 10914128
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  10913917 tcatattgagattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaattccaatatgaat 10914016  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||||| |||||||||||||| || ||||||| ||||| |||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  10914017 caattttacaaggactgaaacaaaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaaccaaaaaaatatttttacacggactaaaac 10914116  T
Q  200 caaaatgtcaga 211  Q
    ||||||||||||    
T  10914117 caaaatgtcaga 10914128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 50624909 - 50625137
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  50624909 tcatattgaaattggtccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccgaatccaatatgaat 50625008  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||| |||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||  |  | |||||||  ||||| ||||    
T  50625009 caattttacagggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaa--atttttttttacagggactaaaac 50625106  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  50625107 caaaatgtcagatatttgcagggactatttt 50625137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 14602153 - 14602381
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  14602153 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctaaatattacaaggaccaaatccaatatgaat 14602252  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa-ttttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||| ||| || ||||||||| |||||||||||||||| ||||||| | ||| ||| | || ||   ||| | ||||    
T  14602253 caattttacaaggactaaaacaaaataacaaggaccaaaaccaatttttttatatttgcagggactaaaactaaaaaaaaaattata--gggattaaaac 14602350  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  14602351 caaaatgtcagatatttgcagggactatttt 14602381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 42154893 - 42155122
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| | ||||||||||||||| | |||||||||||||||||||||||||||||    
T  42154893 tcatattgaaactggtccctataatattcattttagtcctcgttttgagggattaaaatcaaatattctaaatattacaaggaccaaatccaatatgaat 42154992  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgagga-ctgaaa 198  Q
    |||||||| |||||||||||||||||| ||| || ||||||| |||||||||||||||||| ||||||| ||||| |||||||||||| |||| || |||    
T  42154993 caattttataaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaa-aaatatttttac-aggatctaaaa 42155090  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||| ||| |||||||||    
T  42155091 ccaaaatgtcagatatttacagggactatttt 42155122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 39288394 - 39288162
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||| |||||||||||||||||||    
T  39288394 tcatattgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacctattacaaagaccaaatccaatatgaat 39288295  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc--aattttttatatttgcagcgact-aaagccaaacaaatatttttacgaggactgaa 197  Q
    | ||||||||||||||||||||||||||||| || |||||||  |||||||||||||||||| |||| ||| | ||| ||||||||||||   |||| ||    
T  39288294 ctattttacaaggactaaaacaaaataccaaggaccaaaaccaaaattttttatatttgcagtgactaaaatcaaaaaaaatatttttacagagactaaa 39288195  T
Q  198 accaaaatgtcagatatttgcagagactatttt 230  Q
    | |||||||||| ||||||| || |||||||||    
T  39288194 atcaaaatgtcatatatttggagggactatttt 39288162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 47829105 - 47829333
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  47829105 tcatattgaaattggtccctataatattcattttagtcctcattttgagaaactaaaatcaaatattctacatattacaaggaccaaattcaatatgaat 47829204  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa-ttttttatatttgcagcgactaaagc-caaacaaatatttttacgaggactgaaa 198  Q
    ||||||||||||||||||||||||||| ||| || ||||||||| |||||||||||||||| ||||||| |  ||||||| |   ||||  | ||| |||    
T  47829205 caattttacaaggactaaaacaaaatatcaaggaccaaaaccaatttttttatatttgcagggactaaaacaaaaacaaaaa---ttacaggaactaaaa 47829301  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||||||| ||| |||||    
T  47829302 ccaaaatgtcagatatttgcagggacaatttt 47829333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 12322235 - 12322467
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  12322235 tcatattgaaattggtctctataatattcattttagtcctcattttgatttactaaattcaaatattctacatattacaaggaccaaatctaatatgaat 12322334  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgact-aaagccaaacaaatatttttacgaggactgaaa 198  Q
    ||||||||||||||||||||||||||| ||| || ||||||| ||||||||  |||||||| |||| ||| | ||| ||||||||||||  ||| | |||    
T  12322335 caattttacaaggactaaaacaaaatatcaaggaccaaaaccaaatttttttaatttgcagggactaaaatcaaaaaaaatatttttacagggattaaaa 12322434  T
Q  199 ccaaaa-tgtcagatatttgcagagactatttt 230  Q
    |||||| |||||||||||| | | |||||||||    
T  12322435 ccaaaattgtcagatatttacggggactatttt 12322467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 33619133 - 33618976
Alignment:
Q  4 tattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaa 103  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33619133 tattgagattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaa 33619034  T
Q  104 ttttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcag 160  Q
    |||||||| ||| ||||||||||||||| || ||||||| ||| ||||||||||||||    
T  33619033 ttttacaaagacgaaaacaaaataccaacgaccaaaaccaaatattttatatttgcag 33618976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 50096271 - 50096144
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||||||| |||||||||||| | || ||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||||    
T  50096271 attttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 50096172  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||||||||||||||||||| ||| ||||    
T  50096171 aaatgtcagatatttgcagggacaattt 50096144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 39027606 - 39027491
Alignment:
Q  116 taaaacaaaataccaatgatcaaaaccaa-ttttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaaaatgtcagatat 214  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||| |||||||||||||||    
T  39027606 taaaacaaaataccaaggatcaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaagcaaaatgtcagatat 39027507  T
Q  215 ttgcagagactatttt 230  Q
    || | | |||||||||    
T  39027506 ttccggggactatttt 39027491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 26244718 - 26244560
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||| ||||||||| || ||||| ||| | || ||||||||||| ||||||| |    
T  26244718 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaactaaataccaaggaccaaaatcaaatattctatatttgcagggactaaatc 26244619  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| ||||||||||||  ||||| ||||||||||||||||||||||||| ||| ||||    
T  26244618 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggaccattt 26244560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 14602179 - 14602021
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| |||||||||| ||| || ||||||||||| ||||||| |    
T  14602179 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaaac 14602080  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
     ||| |||||||||||   ||||| |||||||| || ||||||||||||| ||| ||||    
T  14602079 taaaaaaatatttttatatggactaaaaccaaagtgccagatatttgcagggaccattt 14602021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 7337154 - 7337053
Alignment:
Q  24 atattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaa 123  Q
    ||||||||||||||  | ||||||||| | ||||||||||||||  |||| |||||||||||||||||||||| |||||||||| |||||||||||| ||    
T  7337154 atattcattttagtttttattttgagggattaaaatcaaatattatacatgttacaaggaccaaatccaatataaatcaattttgcaaggactaaaataa 7337055  T
Q  124 aa 125  Q
    ||    
T  7337054 aa 7337053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 103 - 220
Target Start/End: Complemental strand, 33695 - 33577
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaatt-ttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||||||| || ||||||||| | |||||||||||||| ||||||| | | | |||||||||||   ||||| ||||||    
T  33695 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattttatatttgcagagactaaaactagaaaaatatttttatagggactaaaacca 33596  T
Q  202 aaatgtcagatatttgcag 220  Q
    ||| |||||||||||||||    
T  33595 aaacgtcagatatttgcag 33577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 20062012 - 20062170
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  20062012 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 20062111  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    | || |||||||||||   ||||| ||||||||| | ||||||||||||| ||| ||||    
T  20062112 ccaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccattt 20062170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 28031816 - 28031658
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| ||||||||| | |||||||||   |||||||||||| |||||||||||| ||| || ||||||| ||| || ||||||||||| ||||||| |    
T  28031816 atattataaggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattatatatttgcagggactaaaac 28031717  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| ||||| |||||  |||||| |||| |||| | ||||||||||||| ||| ||||    
T  28031716 caaaaaaataattttataaggactaaaactaaaacgccagatatttgcagggaccattt 28031658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 50624935 - 50624777
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||||| ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  50624935 atattacagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 50624836  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||| | ||  |||||| ||||||| | | ||||||||||||| ||| ||||    
T  50624835 caaaaaaatatatatataaggactaaaaccaatacgccagatatttgcagggaccattt 50624777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 18963769 - 18963620
Alignment:
Q  81 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaat 179  Q
    ||||||| | |||||||||   |||||||||||| |||||||||||| |||||| ||||||| ||| || ||||||||||  ||||||| ||||| ||||    
T  18963769 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataacaatgaccaaaaccaaatattctatatttgcaaggactaaaaccaaaaaaat 18963670  T
Q  180 atttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||||||   ||||| ||||||||| | | ||||||||||| ||| ||||    
T  18963669 atttttatagggactaaaaccaaaacgccggatatttgcagggaccattt 18963620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 29584536 - 29584641
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||| |||||| || ||||||||||||||||||| ||||||||| ||  ||||| ||||||| |||||||||| | ||| | ||||||||||||    
T  29584536 tcatattgaagttggtctctctaatattcattttagtccttattttgagggacacaaatcgaatattctacatattacaggtacctattccaatatgaat 29584635  T
Q  101 caattt 106  Q
     |||||    
T  29584636 gaattt 29584641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 82 - 230
Target Start/End: Complemental strand, 12322251 - 12322102
Alignment:
Q  82 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaata 180  Q
    |||||| | |||||||||   |||||||||||| |||||||| ||||| | || ||||||||| | || |||||||| || ||||||  ||||| |||||    
T  12322251 gaccaatttcaatatgaaatgattttacaaggattaaaacaatatacctaggaccaaaaccaaatattctatatttgtagggactaataccaaaaaaata 12322152  T
Q  181 tttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    ||||||   ||||| ||||||||| ||||||||||| ||||||| |||||    
T  12322151 tttttatagggactaaaaccaaaacgtcagatatttacagagaccatttt 12322102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 43191870 - 43192015
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   ||||||||||||  ||||||||||||||| || ||||||| ||| || |||||||||||  |||||| |    
T  43191870 atattatagggaccaatttcaatatgaaatgattttacaaggatcaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaggaactaaaac 43191969  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatattt 216  Q
    |||| |||||||||||   | ||| || |||||||| |||||||||    
T  43191970 caaaaaaatatttttataggaactaaatccaaaatgccagatattt 43192015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 10913912 - 10913828
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatattttta 186  Q
    |||||||||||| |||||||||||| |||||| ||||||| ||| || ||||||||||| ||||||| ||||| |||||| ||||    
T  10913912 attttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatcttta 10913828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 229
Target Start/End: Original strand, 33619141 - 33619268
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| ||||||||||||| || || ||||||| ||| || |||||||| || ||||||| ||||| |||||||||||   | ||| ||||||    
T  33619141 attttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgtagggactaaaaccaaaaaaatatttttataggaactaaaacca 33619240  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    |||   ||||||||||||| ||| ||||    
T  33619241 aaacaccagatatttgcagggaccattt 33619268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 37172493 - 37172607
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    ||||||||| || |||||||||||||||| || ||||||| ||| || |||||| |||| ||||||| ||||| |||||||||||   ||||| ||| ||    
T  37172493 attttacaatgattaaaacaaaataccaaagaccaaaaccaaatattctatattcgcagggactaaaaccaaaaaaatatttttatagggactaaaatca 37172592  T
Q  202 aaatgtcagatattt 216  Q
    ||| | |||||||||    
T  37172593 aaacgccagatattt 37172607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 44561680 - 44561822
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| |||||||||| | |||||||||||| | |||| | ||||||| |||||||||||||| |   |||||||||||||| |||| |||| | |||    
T  44561680 tcatattaaaattggtccttgtaatattcatttaa-tccttagtttgagggactaaaatcaaataattttcatattacaaggactaaattcaattttaat 44561778  T
Q  101 caattttacaag----gactaaaacaaaataccaatgatcaaaa 140  Q
     |||||| ||||    ||||||||||||| | ||| ||||||||    
T  44561779 aaattttgcaagcaaagactaaaacaaaacaacaaggatcaaaa 44561822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11200428 - 11200353
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatatt 76  Q
    ||||||| ||||||||| |||||||||||||||||||| | |||||||||  ||| ||| ||||| || |||||||    
T  11200428 tcatattaaaattggtcactataatattcattttagtctttattttgaggagctataattaaatactctacatatt 11200353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 47829131 - 47829017
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||| |||||||||| || ||||||| ||| || ||||||||||| |||||||      
T  47829131 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaagaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaa-a 47829033  T
Q  171 caaacaaatattttta 186  Q
    |||| |||||||||||    
T  47829032 caaaaaaatattttta 47829017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 52490080 - 52490119
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcct 40  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  52490080 tcatattgaaattggtccctataatatttattttagtcct 52490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 51999613 - 51999559
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatattt 156  Q
    ||||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||    
T  51999613 attttacaaggactaaaacaaaatatcaaggattaaaaccaaattttttatattt 51999559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 39288368 - 39288528
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   ||||||||| || |||||||||||||||| || ||||||||| | || | |||||| |  ||||||| |    
T  39288368 atattatagggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaggaccaaaaccaaatattctttatttgaatggactaaaac 39288467  T
Q  171 caaacaa-atatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
     ||| || |||||||||  |||| | |||| |||| ||||||||||||||| ||| |||||    
T  39288468 aaaaaaatatatttttataaggattaaaactaaaacgtcagatatttgcagggaccatttt 39288528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 174
Target Start/End: Complemental strand, 42154888 - 42154816
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaac-caattttttatatttgcagcgactaaagccaaa 174  Q
    |||||||||||| |||||||||||||||| || ||||||  ||| || ||||||||||| ||||||| |||||    
T  42154888 attttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggactaaaaccaaa 42154816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 164; Significance: 3e-87; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 37005 - 36777
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37005 tcatattgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 36906  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||| |||||||||  |  ||||| ||||    
T  36905 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttt--cagggactaaaac 36808  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  36807 caaaatgtcagatatttgcagggactatttt 36777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 36979 - 37051
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaa 144  Q
    |||||| | ||||||| | |||||||||  ||||||||||||| |||||||||||||||| || |||||||||    
T  36979 atattatagggaccaatttcaatatgaaataattttacaaggattaaaacaaaataccaaggaccaaaaccaa 37051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 1e-86; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 3272863 - 3273093
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  3272863 tcatattgaaattggtccctataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattacaaagaccaaatccaatatgaat 3272962  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa-ttttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||| |||||||  |||| |||||||||||   ||||| ||||    
T  3272963 caattttacaaggactaaaacaaaataccaaggaccaaaaccaagttttttatatttgcagggactaaaatcaaaaaaatatttttatagggactaaaac 3273062  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  3273063 caaaatgtcagatatttgcagggactatttt 3273093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 13154382 - 13154612
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13154382 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 13154481  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa-ttttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||| ||||||| ||||| ||||||||||||  ||| | |||     
T  13154482 caattttacaaggacaaaaacaaaataccaaggaccaaaaccaatttttttatatttgcagggactaaaaccaaaaaaatatttttacagggattaaaat 13154581  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||| || |||||||||    
T  13154582 caaaatgtcagatatttgtagggactatttt 13154612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 13405591 - 13405821
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13405591 tcatattgaaattggtccttataatattcattttagtcctcatttcaagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 13405690  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||| |||||||||||||||| || ||||||| ||||||||||||||| || ||||||| ||||| ||||||||||||  ||| | ||||    
T  13405691 caattttacaaggaataaaacaaaataccaaggaccaaaaccaaattttttatatttgaagggactaaaaccaaaaaaatatttttacagggattaaaac 13405790  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||| ||||||||||| ||||||||    
T  13405791 caaaatgtcaaatatttgcagaaactatttt 13405821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 18764525 - 18764295
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18764525 tcatattgaaattggtccctataaaattcattatagtcgtcattttgaaggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 18764426  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||| ||||||||||||||| || ||||||| || |||||||||||| || |||| || ||||| |||||||||||| |||||| ||||    
T  18764425 caattttacaaggacaaaaacaaaataccaaagaccaaaaccaaagtttttatatttgaagggactcaaaccaaaaaaatatttttacaaggactaaaac 18764326  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  18764325 caaaatgtcagatatttgcagggactatttt 18764295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 31403150 - 31402922
Alignment:
Q  4 tattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaa 103  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31403150 tattgagattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaa 31403051  T
Q  104 ttttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgact-aaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||| ||| |||||||| |||||| || ||||||| ||| |||||||||||||| |||| ||| || || |||||||||||| |||||| ||||||    
T  31403050 ttttacaaagacgaaaacaaattaccaacgaccaaaaccaaatattttatatttgcagggactaaaaccccaaaaaatatttttacaaggactaaaacca 31402951  T
Q  202 aaatgtcagatatttgcagagactatttt 230  Q
    |||| |||||||||||||| |||||||||    
T  31402950 aaatatcagatatttgcagggactatttt 31402922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 6943800 - 6944030
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  6943800 tcatattgaaattagtccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctatatattacaaggaccaaatccaatatgaat 6943899  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||||||||| |||||| |||  | ||||| | ||||||| |||||||||| ||||||| ||||| ||||||||||||  | ||| ||||    
T  6943900 caattttacaaggactaaaataaaatatcaagaaccaaaatcaaatttttcatatttgcagggactaaaaccaaaaaaatatttttacaggaactaaaac 6943999  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  6944000 caaaatgtcagatatttgcagggactatttt 6944030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 9180188 - 9180408
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || ||||| |||||||||||||||| |||||    
T  9180188 tcatattgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacgtattataaggaccaaatccaatctgaat 9180287  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||| ||| || ||||||| |||||||||||||||||  ||||||| |||||  |||||||||||  ||| | ||||    
T  9180288 caattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaaggactaaaaccaaaacaatatttttacagggattaaaac 9180387  T
Q  200 caaaatgtcagatatttgcag 220  Q
    |||||||||||||||||||||    
T  9180388 caaaatgtcagatatttgcag 9180408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 24332405 - 24332631
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  24332405 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaattcaatatgaat 24332504  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||||||| |||||| ||||||| | ||| ||| |   ||||  ||||| ||||    
T  24332505 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttata-ttgcagggactaaaacaaaaaaaaaa---ttacagggactaaaac 24332600  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
     |||||||||||||||||||| ||| |||||    
T  24332601 taaaatgtcagatatttgcagggacaatttt 24332631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 31685813 - 31685988
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatga-a 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||      
T  31685813 tcatattgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaagaccaaatccaatatgatt 31685912  T
Q  100 tcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaa 174  Q
    | ||||||||||||||||||||||||||| || || ||||||| |||||||||||||||||| ||||||| |||||    
T  31685913 taaattttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaa 31685988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 31186516 - 31186690
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  31186516 tcatattaaaatcggtccttataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattataaggaccaaatccaatatgaat 31186615  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaa 174  Q
    ||||||||||||||||| ||||||||||||| || ||||||| ||||||||| |||| ||| ||||||| |||||    
T  31186616 caattttacaaggactacaacaaaataccaaggaccaaaaccaaattttttagatttacagggactaaaaccaaa 31186690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 6891921 - 6892064
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||||||||    
T  6891921 tcatattaaaattggtccctataatatttattttagtcctcattttgagggactaaaattaaatattctacatattacaaggaccaaatcgaatatgaat 6892020  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa 144  Q
    ||||||||||||||||||||||||| ||||| || |||||||||    
T  6892021 caattttacaaggactaaaacaaaacaccaaggaccaaaaccaa 6892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 37586257 - 37586118
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| | |||||||||||||||||| ||||||||||    
T  37586257 tcatattgaaattggtccatataatattcattttagtcttcattttgagggactaaaatcaaatattctaaatattacaaggaccaaat-caatatgaat 37586159  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaac 141  Q
     |||||||||||||||||||||||||||||| || ||||||    
T  37586158 aaattttacaaggactaaaacaaaataccaaggaccaaaac 37586118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 20112558 - 20112787
Alignment:
Q  1 tcatattgaaattggtccctataa-tattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaa 99  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||| | |||||||| |||||||| || |||||||||||| |||||| |||||||    
T  20112558 tcatattgaaattggttactataaatattcattttagtcctcattttgaaggactaaaattaaatattctacgtattacaaggacaaaatcctatatgaa 20112657  T
Q  100 tcaattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaa 198  Q
    | ||||||| |||||||||||||||||| ||| ||| |||| | ||||||||||||||  ||  |||||| ||||| | ||||||| || |||| | |||    
T  20112658 ttaattttagaaggactaaaacaaaatatcaaggattaaaatcaaattttttatatttagaggaactaaaaccaaaaatatattttcacaaggattaaaa 20112757  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
     | |||| ||| |||||||||| |||||||||    
T  20112758 tcgaaatttca-atatttgcag-gactatttt 20112787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 220657 - 220774
Alignment:
Q  3 atattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatca 102  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| | | | ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  220657 atattgaaattggtcactataatattcattttaatcctcattttaaaggattaaaatcaaatattctacatattacaaagaccaaatccaatatgaatca 220756  T
Q  103 attttacaaggactaaaa 120  Q
    ||||||||| ||| ||||    
T  220757 attttacaaagacaaaaa 220774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 689812 - 689929
Alignment:
Q  3 atattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatca 102  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| | | | ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  689812 atattgaaattggtcactataatattcattttaatcctcattttaaaggattaaaatcaaatattctacatattacaaagaccaaatccaatatgaatca 689911  T
Q  103 attttacaaggactaaaa 120  Q
    ||||||||| ||| ||||    
T  689912 attttacaaagacaaaaa 689929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 734280 - 734397
Alignment:
Q  3 atattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatca 102  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| | | | ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  734280 atattgaaattggtcactataatattcattttaatcctcattttaaaggattaaaatcaaatattctacatattacaaagaccaaatccaatatgaatca 734379  T
Q  103 attttacaaggactaaaa 120  Q
    ||||||||| ||| ||||    
T  734380 attttacaaagacaaaaa 734397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 858176 - 858293
Alignment:
Q  3 atattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatca 102  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| | | | ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  858176 atattgaaattggtcactataatattcattttaatcctcattttaaaggattaaaatcaaatattctacatattacaaagaccaaatccaatatgaatca 858275  T
Q  103 attttacaaggactaaaa 120  Q
    ||||||||| ||| ||||    
T  858276 attttacaaagacaaaaa 858293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 27993517 - 27993298
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||| |||||||||||||||||||||| |||||||| || ||||||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||     
T  27993517 tcataatgaaattggtccctataatatttattttagttcttattttgagggactaaaatcaaatattctacatgttacaaggaccaaatccaatgtgaaa 27993418  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc--aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaa 198  Q
      ||||| ||||||||||||| |||||  || ||| |||| |  ||  || ||||||||||   |||||| ||||| ||||||||||||  ||||| |||    
T  27993417 acattttgcaaggactaaaactaaataaaaaggattaaaagcaaaaaattatatatttgcacgaactaaaaccaaa-aaatatttttacagggactaaaa 27993319  T
Q  199 ccaaaatgtcagatatttgca 219  Q
    ||||||||   ||||||||||    
T  27993318 ccaaaatgcttgatatttgca 27993298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 28050819 - 28050600
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||| |||||||||||||||||||||| |||||||| || ||||||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||     
T  28050819 tcataatgaaattggtccctataatatttattttagttcttattttgagggactaaaatcaaatattctacatgttacaaggaccaaatccaatgtgaaa 28050720  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc--aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaa 198  Q
      ||||| ||||||||||||| |||||  || ||| |||| |  ||  || ||||||||||   |||||| ||||| ||||||||||||  ||||| |||    
T  28050719 acattttgcaaggactaaaactaaataaaaaggattaaaagcaaaaaattatatatttgcacgaactaaaaccaaa-aaatatttttacagggactaaaa 28050621  T
Q  199 ccaaaatgtcagatatttgca 219  Q
    ||||||||   ||||||||||    
T  28050620 ccaaaatgcttgatatttgca 28050600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 106 - 230
Target Start/End: Original strand, 2835342 - 2835466
Alignment:
Q  106 ttacaaggactaaaacaaaataccaatgatcaaaaccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaaaat 205  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||||||||| |||||||  |||| ||||||||||||   |||| ||||||||||    
T  2835342 ttacaaggactaaaacaaaataccaagaaccaaaaccaattttttatatttgcagggactaaaatcaaaaaaatatttttacagcgactaaaaccaaaat 2835441  T
Q  206 gtcagatatttgcagagactatttt 230  Q
    ||||||||||||| | |||||||||    
T  2835442 gtcagatatttgcggggactatttt 2835466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26479534 - 26479451
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggac 84  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  26479534 tcatattgaaattagtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggac 26479451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 2835274 - 2835351
Alignment:
Q  7 tgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggac 84  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||   ||||||||||||||    
T  2835274 tgaaattggtccctataatattcattttaatcctcattttgagggactaaaatcaaatattatgcatattacaaggac 2835351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 36449201 - 36449102
Alignment:
Q  7 tgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattt 106  Q
    ||||||||||||||| |||||||||||||||||| |||||| || ||||||||||||| ||| | || ||||||||||||| ||||||| |||| |||||    
T  36449201 tgaaattggtccctacaatattcattttagtccttattttgtgggactaaaatcaaatgttctatattttacaaggaccaattccaatacgaataaattt 36449102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 106 - 230
Target Start/End: Complemental strand, 26479460 - 26479336
Alignment:
Q  106 ttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaaaa 204  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||||||||||| ||||||| || ||    | |||||||  ||||| |||||||||    
T  26479460 ttacaaggactaaaacaaaataccaatgaccaaaaccaaaatttttatatttgcagtgactaaaacc-aatttttttttttacagggactaaaaccaaaa 26479362  T
Q  205 tgtcagatatttgcagagactatttt 230  Q
    ||||| |||||||||| |||||||||    
T  26479361 tgtcaaatatttgcagggactatttt 26479336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 2679219 - 2679095
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| |||||| ||  ||||||||||| ||||||| | || |||| | |||||||||| ||| || |||||||| ||||||||||||| |||| |||    
T  2679219 tcatattaaaattgatctttataatattcagtttagtctttatcttgatgaactaaaatcatatactctacatattataaggaccaaatcctatataaat 2679120  T
Q  101 caattttacaaggactaaaacaaaa 125  Q
    |||||||  ||||||||||||||||    
T  2679119 caattttgtaaggactaaaacaaaa 2679095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 37856361 - 37856485
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||| ||| ||  |||| ||| ||||||||| ||||||||| | |||||||||||| || | ||||||||||    |||||||||| ||||    
T  37856361 tcatattgaaattagtctctgcaatactcaatttagtccttattttgagggattaaaatcaaatactctatatattacaagagataaatccaataagaat 37856460  T
Q  101 caattttacaaggactaaaacaaaa 125  Q
    ||||||||||||||||| |||||||    
T  37856461 caattttacaaggactataacaaaa 37856485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 13154408 - 13154250
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||| ||| | || ||||||||||| ||||||| |    
T  13154408 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggactaaaac 13154309  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| |||||||||   ||||||||||||| ||| ||||    
T  13154308 caaaaaaatatttttagagggactaaaaccaaaacaccagatatttgcagggaccattt 13154250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 31186511 - 31186385
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||| | ||||||||||||||||||| ||||||||| | || ||||||||||| |||||||  |||| |||||||||||   ||||| ||||||    
T  31186511 attttacaag-attaaaacaaaataccaatgaccaaaaccaaatattctatatttgcagggactaaaatcaaaaaaatatttttatagggactaaaacca 31186413  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||| | ||||||||||||| ||| ||||    
T  31186412 aaacgccagatatttgcagggaccattt 31186385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 31685839 - 31685690
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||  ||||||| |    
T  31685839 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggactaaaac 31685740  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcag 220  Q
    |||| |||||||||||   ||| | ||||||||| |  ||||||||||||    
T  31685739 caaaaaaatatttttatagggattaaaaccaaaacgctagatatttgcag 31685690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 6943795 - 6943679
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| |||||||  |||| |||||||||||   ||||| ||||||    
T  6943795 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaatcaaaaaaatatttttatagggactaaaacca 6943696  T
Q  202 aaatgtcagatatttgc 218  Q
    ||| | || ||||||||    
T  6943695 aaacgccaaatatttgc 6943679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 220650 - 220524
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||| ||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| ||||| |||||||||||   ||||| || |||    
T  220650 attttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaa-aaatatttttatagggactaaatcca 220552  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||||| ||||||||| ||| ||| ||||    
T  220551 aaatgccagatatttacagggaccattt 220524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 689805 - 689679
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||| ||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| ||||| |||||||||||   ||||| || |||    
T  689805 attttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaa-aaatatttttatagggactaaatcca 689707  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||||| ||||||||| ||| ||| ||||    
T  689706 aaatgccagatatttacagggaccattt 689679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 734273 - 734147
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||| ||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| ||||| |||||||||||   ||||| || |||    
T  734273 attttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaa-aaatatttttatagggactaaatcca 734175  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||||| ||||||||| ||| ||| ||||    
T  734174 aaatgccagatatttacagggaccattt 734147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 858169 - 858043
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||| ||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| ||||| |||||||||||   ||||| || |||    
T  858169 attttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaa-aaatatttttatagggactaaatcca 858071  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||||| ||||||||| ||| ||| ||||    
T  858070 aaatgccagatatttacagggaccattt 858043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 2835263 - 2835136
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaatt-ttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    ||||||||| || |||||||||||||| | || ||||||||| | |||||||||| ||| ||||||| ||||| |||||||||||     ||| ||||||    
T  2835263 attttacaatgattaaaacaaaataccgaggaccaaaaccaaatattttatatttacagagactaaaaccaaaaaaatatttttatagaaactaaaacca 2835164  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    |||  |||||||||||||||||| ||||    
T  2835163 aaacatcagatatttgcagagaccattt 2835136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 229
Target Start/End: Original strand, 31403158 - 31403285
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| ||||||||||||| || || ||||||||| | || |||||||| || ||||||| ||||| |||||||||||  || ||| ||||||    
T  31403158 attttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgaagggactaaaaccaaaaaaatatttttataagaactaaaacca 31403257  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    |||   ||||||||||||| ||| ||||    
T  31403258 aaacaccagatatttgcagggaccattt 31403285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 13405617 - 13405459
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaac-caattttttatatttgcagcgactaaagc 170  Q
    |||||| ||||||||| | |||||||||   ||||||||| || |||||||||||||||| || ||||||  ||| || ||||||| ||| | ||||| |    
T  13405617 atattataaggaccaatttcaatatgaaatgattttacaatgattaaaacaaaataccaaagaccaaaacaaaatattctatatttacagggtctaaaac 13405518  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    ||||||||||||||||  |  ||| ||| ||||||  ||||||||||||| ||| ||||    
T  13405517 caaacaaatatttttataaaaactaaaatcaaaataccagatatttgcagggaccattt 13405459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 24332431 - 24332285
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || | ||||| ||| || ||||||||||| ||||||| |    
T  24332431 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggacccaaaccaaatattctatatttgcagggactaaaac 24332332  T
Q  171 c-aaacaaatatttttacgaggactgaaaccaaaatgtcagatattt 216  Q
    | ||| |||||||||||   ||| | ||||||||| |||| ||||||    
T  24332331 caaaaaaaatatttttatagggattaaaaccaaaacgtcatatattt 24332285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 6891916 - 6891790
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgact-aaagccaaacaaatatttttacgaggactgaaacc 200  Q
    |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| |||| ||| | ||| ||||||||||| || |||| ||||     
T  6891916 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaacaaaaaaaatattttta-ga-gactaaaaca 6891819  T
Q  201 aaaatgtcagatatttgcagagactattt 229  Q
    |||| | ||||||||||||| ||| ||||    
T  6891818 aaaacgccagatatttgcagggaccattt 6891790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 18764508 - 18764596
Alignment:
Q  81 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaa 168  Q
    ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| |||||||    
T  18764508 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaa 18764596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 9180214 - 9180099
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||| ||||| || || |||| ||| || ||||||||||  ||||||| |    
T  9180214 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaaaaccaaggaccacaaccaaatattctatatttgcatggactaaaac 9180115  T
Q  171 caaacaaatattttta 186  Q
    |||| |||||||||||    
T  9180114 caaaaaaatattttta 9180099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 229
Target Start/End: Original strand, 26479539 - 26479666
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| ||||||||||||| || || ||||||| ||| || ||||||||||| ||||||| |||||    | ||||||   ||||| ||||||    
T  26479539 attttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaatttttttttttatagggactaaaacca 26479638  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||| | ||||||||||||| ||| ||||    
T  26479639 aaacgccagatatttgcagggaccattt 26479666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32399229 - 32399152
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaa 80  Q
    |||||||||||||||| | ||||||||||||||||||  | ||||||||| ||| ||||||||||||| | |||||||||    
T  32399229 tcatattgaaattggtacttataatattcattttagt-tttattttgagggact-aaatcaaatattctagatattacaa 32399152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 3272889 - 3272817
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaa 144  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || |||||||||    
T  3272889 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaa 3272817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 31186677 - 31186717
Alignment:
Q  190 ggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    ||||| ||||||||||||||||||||||||| |||||||||    
T  31186677 ggactaaaaccaaaatgtcagatatttgcagggactatttt 31186717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 20764791 - 20764689
Alignment:
Q  22 taatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaac 121  Q
    ||||| ||||||||||||| |||||||||   |||||||||||| | ||||||||| |||||| || |  ||||| ||| |||||||| |||| |||||     
T  20764791 taatactcattttagtccttattttgagggt-taaaatcaaatacttgacatattataaggactaattttaatataaataaattttactaggattaaaat 20764693  T
Q  122 aaaa 125  Q
    ||||    
T  20764692 aaaa 20764689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 36820420 - 36820489
Alignment:
Q  56 aaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaa 125  Q
    |||||||||| || | ||||||||| |||||||||||| |||| | || ||| ||| |||||||||||||    
T  36820420 aaatcaaataatctatatattacaatgaccaaatccaacatgagttaaatttgcaaagactaaaacaaaa 36820489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 1e-86; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 42517010 - 42517228
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42517010 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 42517109  T
Q  101 caattttacaaggactaaaacaaaataccaatga-tcaaaaccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || | ||| | |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  42517110 caattttacaaggactaaaacaaaataccaaggactaaaatcaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 42517209  T
Q  200 caaaatgtcagatatttgc 218  Q
    |||||||||||||||||||    
T  42517210 caaaatgtcagatatttgc 42517228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 19157836 - 19158066
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  19157836 tcatattgaaattggtccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccgaatccaatatgaat 19157935  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||| |||||||||||||||||||| || ||||||| || ||||||||||||||| ||||||| | ||| ||||||||||||  ||||| ||||    
T  19157936 caattttacagggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaac 19158035  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  19158036 caaaatgtcagatatttgcagggactatttt 19158066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 20757235 - 20757465
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  20757235 tcatattgaaattggtccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccgaatccaatatgaat 20757334  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||| |||||||||||||||||||| || ||||||| || ||||||||||||||| ||||||| | ||| ||||||||||||  ||||| ||||    
T  20757335 caattttacagggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaac 20757434  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  20757435 caaaatgtcagatatttgcagggactatttt 20757465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 40729206 - 40729436
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||||||||    
T  40729206 tcatattaaaattggtccctataatattcattttagttctcattttgagggactaaaattaaatattctacatattacaaggaccaaatcgaatatgaat 40729305  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  40729306 caattttacaaggactaaaacaaaacaccaaggaccaaaacccaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 40729405  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||||| ||||||||||    
T  40729406 caaaatgtcagatatttgcaaagactatttt 40729436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 4 - 230
Target Start/End: Complemental strand, 24593 - 24366
Alignment:
Q  4 tattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaa 103  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24593 tattgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaa 24494  T
Q  104 ttttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaa 202  Q
    ||||||||||| ||||||||||||| || |  ||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| |||||||    
T  24493 ttttacaaggaataaaacaaaatacaaaggtccaaaacccaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaa 24394  T
Q  203 aatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||| | |||||||||    
T  24393 aatgtcagatatttgccgggactatttt 24366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 44219534 - 44219304
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44219534 tcatattgaaattggtccctctagtattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 44219435  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||||||||||||||||| || || ||||||| ||||||||||||||  || |||||||  |||| ||||||||||||   |||| ||||    
T  44219434 caattttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttatagggactaaaaacaaaaaaatatttttacagtgactaaaac 44219335  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  44219334 caaaatgtcagatatttgcagggactatttt 44219304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 44483373 - 44483599
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||  || ||||||||||||||    ||||||||||||||||||||||||||||    
T  44483373 tcatattgaaattagtccctataatattcattttagtcctcattttgagagaccaaaatcaaatattc----tattacaaggaccaaatccaatatgaat 44483468  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  44483469 caattttacaaggactaaaacaaaataccaatgaccaaaaccaaaatttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 44483568  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||| | |||||||| | |||||||||    
T  44483569 caaaatgttaaatatttgcggggactatttt 44483599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 35026587 - 35026816
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  35026587 tcatattaaaattggtccctataatattcattttagtcctcgttttgaaggactaaaatcaaatattttacatattacaaggaccaaatccaatatgaat 35026686  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa-ttttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||| ||| || ||||||||| |||||||||||| ||| ||||||| ||||| ||||||||||||  | ||| ||||    
T  35026687 caattttacaaggactaaaacaaaatatcaaggaccaaaaccaatttttttatatttacagagactaaaaccaaaaaaatatttttacatgaactaaaac 35026786  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||| |||||| ||| |||||||||    
T  35026787 caaaatgtca-atatttacagggactatttt 35026816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 22364891 - 22364667
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22364891 tcatattgaaattggtcc-tataatattcattttagtcct-attttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 22364794  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacc 200  Q
    ||||||| ||||||||||||||||||| ||| || |||| | |||||||||||||||||| ||||||| ||||| ||| |   ||||  ||||| |||||    
T  22364793 caattttgcaaggactaaaacaaaatatcaaggaccaaaccaaattttttatatttgcagggactaaaaccaaaaaaaaa---ttacagggactaaaacc 22364697  T
Q  201 aaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||||| |||||||||    
T  22364696 aaaatgtcagatatttgcagggactatttt 22364667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 34595559 - 34595328
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  34595559 tcatattgaaattggtccctataatattcatttcagtcctcattttgagggactaaattcaaatattctacatattacaaggaccaaatctaatatgaat 34595460  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||||  |||||||| |||||||  |||| ||||||||||||  ||| | ||||    
T  34595459 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttttaatttgcagggactaaaatcaaaaaaatatttttacagggattaaaac 34595360  T
Q  200 caaaa-tgtcagatatttgcagagactatttt 230  Q
    ||||| |||||||||||| | | |||||||||    
T  34595359 caaaattgtcagatatttacggggactatttt 34595328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 31579671 - 31579498
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31579671 tcatattaaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 31579572  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaaccaa-ttttttatatttgcagcgactaaagccaa 173  Q
    ||||||||||||||| ||||||||||||||| || ||||| ||| |||||||||||||||| ||||||| ||||    
T  31579571 caattttacaaggacaaaaacaaaataccaaggaccaaaatcaatttttttatatttgcagggactaaaaccaa 31579498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 34487285 - 34487491
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  34487285 tcatattgaaattggtctctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaatgaccaaatccaatatgaat 34487384  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgact-aaagccaaacaaatatttttacgaggactgaaa 198  Q
    ||||||||||||||||||||||||||||||| || | ||||| ||||||||||||||| || |||| ||| | ||| |||||||||||   ||||| |||    
T  34487385 caattttacaaggactaaaacaaaataccaaggaccgaaaccaaattttttatatttggagggactaaaatcaaaaaaaatatttttatagggactaaaa 34487484  T
Q  199 ccaaaat 205  Q
    |||||||    
T  34487485 ccaaaat 34487491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 19476537 - 19476769
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19476537 tcatattgaagttggtccctataatattcattttagtactcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 19476636  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc-caaacaaatatttttacgaggactgaaa 198  Q
    |||||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |  ||| ||||||||||||  | ||| |||    
T  19476637 caattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaacaaaaaaaaatatttttacaggaactaaaa 19476736  T
Q  199 c-caaaatgtcagatatttgcagagactatttt 230  Q
    |  ||||| |||||||||||||  |||||||||    
T  19476737 ctaaaaatatcagatatttgcaaggactatttt 19476769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 7 - 168
Target Start/End: Complemental strand, 22954574 - 22954412
Alignment:
Q  7 tgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattt 106  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  22954574 tgaaattagtccctataatattcattttaatcctcattttgagggactagaatcaaatattctacatattacaaggaccaaattcaatatgaatcaattt 22954475  T
Q  107 tacaaggactaaaacaaaataccaatgatcaaaaccaatt-ttttatatttgcagcgactaaa 168  Q
    ||||||||||||||||||||| ||| || || |||||||| |||||||||||||| |||||||    
T  22954474 tacaaggactaaaacaaaatatcaaggaccacaaccaatttttttatatttgcagggactaaa 22954412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13426532 - 13426403
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||| | |||||||||| ||||||||||||||    
T  13426532 tcatattgaaattggtccctataatattcattttagtcctcattttgaggggctaaaatcaaatattctacacactacaaggacc-aatccaatatgaat 13426434  T
Q  101 caattttacaaggactaaaacaaaataccaa 131  Q
    |||||||| |||||  |||||||||||||||    
T  13426433 caattttataaggataaaaacaaaataccaa 13426403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23177190 - 23177303
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| |||||| | | ||||||||||||||||||||| ||||| ||| | ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  23177190 tcatattaaaattgatgcatataatattcattttagtccttattttaagggattaaaatcaaatattctacatattacaatgaccaaatccaatatgaat 23177289  T
Q  101 caattttacaagga 114  Q
    ||||||| ||||||    
T  23177290 caattttccaagga 23177303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 80 - 219
Target Start/End: Original strand, 22364873 - 22365013
Alignment:
Q  80 aggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaa 178  Q
    |||||||| | |||||||||   |||||||||||| |||||||||||||||| |||||||||| ||| || ||||||||||| ||||||| ||||| |||    
T  22364873 aggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaaaccaaaaaaa 22364972  T
Q  179 tatttttacgaggactgaaaccaaaatgtcagatatttgca 219  Q
    ||||||||  | |||| |||||||||||  |||||||||||    
T  22364973 tatttttataaagactaaaaccaaaatgcaagatatttgca 22365013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 34595533 - 34595692
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||| ||||||| || ||||||||| | || ||||||||||| |||||||||    
T  34595533 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaatataccaaggaccaaaaccaaatattctatatttgcagggactaaagc 34595632  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    |||| |||||||||||   ||||| ||||||||| ||||||||||| ||| ||| |||||    
T  34595633 caaaaaaatatttttatagggactaaaaccaaaacgtcagatatttacagggaccatttt 34595692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 13426506 - 13426655
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||||| | || ||||||||||| ||||||| |    
T  13426506 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 13426605  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcag 220  Q
    |||| |||||||||||   ||||| |||| |||| |||||||||||||||    
T  13426606 caaaaaaatatttttagagggactaaaactaaaacgtcagatatttgcag 13426655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 23190504 - 23190621
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttga-ggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaa 99  Q
    ||||||| |||||| | | ||||||||||||||||||||| ||||| | || | ||||||||||||||  ||||||||||| ||||||||||||||| ||    
T  23190504 tcatattaaaattgatacatataatattcattttagtccttatttttaagggattaaaatcaaatattttacatattacaatgaccaaatccaatataaa 23190603  T
Q  100 tcaattttacaaggacta 117  Q
    |||||||| |||||||||    
T  23190604 tcaattttgcaaggacta 23190621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 829916 - 830052
Alignment:
Q  93 atatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgagg 191  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||| || | ||| ||| |   ||||  ||    
T  829916 atatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactgaaactaaaaaaaaa--attacaggg 830013  T
Q  192 actgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    | | |||| |||||||||||||||||||  |||||||||    
T  830014 attaaaactaaaatgtcagatatttgcaaggactatttt 830052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 1195096 - 1195232
Alignment:
Q  93 atatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgagg 191  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||| || | ||| ||| |   ||||  ||    
T  1195096 atatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactgaaactaaaaaaaaa--attacaggg 1195193  T
Q  192 actgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    | | |||| |||||||||||||||||||  |||||||||    
T  1195194 attaaaactaaaatgtcagatatttgcaaggactatttt 1195232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 42517036 - 42516878
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || |||||| || | || ||||||||||| ||||||| |    
T  42517036 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggactaaaac 42516937  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   | ||| ||||||||||| ||||||||||||| ||| ||||    
T  42516936 caaaaaaatatttttataggaactaaaaccaaaatgccagatatttgcagggaccattt 42516878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 35026582 - 35026456
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| || ||||||||||  |||||||  |||| ||| ||||||||  ||||| ||||||    
T  35026582 attttacaaggattaaaacaaaataccaatgatcaaaaccaaatattctatatttgcatggactaaa-acaaaaaaaaatttttacagggactaaaacca 35026484  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||| ||||||| ||||||| ||| ||||    
T  35026483 aaacgtcagatgtttgcagggaccattt 35026456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 19157862 - 19157706
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||||| ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  19157862 atattacagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 19157763  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| ||| | || ||  |||||| ||||||| | | ||||||||||||| ||| ||||    
T  19157762 caaaaaaaaaattata--aggactaaaaccaatacgccagatatttgcagggaccattt 19157706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 20757261 - 20757105
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||||| ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  20757261 atattacagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 20757162  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| ||| | || ||  |||||| ||||||| | | ||||||||||||| ||| ||||    
T  20757161 caaaaaaaaaattata--aggactaaaaccaatacgccagatatttgcagggaccattt 20757105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 81 - 229
Target Start/End: Original strand, 44219517 - 44219666
Alignment:
Q  81 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaat 179  Q
    ||||||| | |||||||||   |||||||||||| |||||||||||||||| |  ||||||| ||| || ||| ||||||| ||||||| ||||| ||||    
T  44219517 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagggccaaaaccaaatattctatttttgcagggactaaaaccaaaaaaat 44219616  T
Q  180 atttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||||||   ||| | ||||||||| |  |||||||||||| ||||||||    
T  44219617 atttttatagggaataaaaccaaaacgcaagatatttgcagggactattt 44219666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 220
Target Start/End: Complemental strand, 34487301 - 34487162
Alignment:
Q  82 gaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaata 180  Q
    |||||| | |||||||||   ||||||||| || |||||||||||||||| ||  |||||||| | || ||||||||||| ||||||| ||||| |||||    
T  34487301 gaccaatttcaatatgaaatgattttacaacgattaaaacaaaataccaaagacaaaaaccaaatattctatatttgcagagactaaaaccaaaaaaata 34487202  T
Q  181 tttttacgaggactgaaaccaaaatgtcagatatttgcag 220  Q
    ||||||  ||  || ||||||||| | |||||||||||||    
T  34487201 tttttataagagctaaaaccaaaacggcagatatttgcag 34487162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 22954576 - 22954660
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatattttta 186  Q
    |||||||||||| |||||||||||||||| || ||||| | ||| || ||||||||||| ||||||| ||||| |||||||||||    
T  22954576 attttacaaggattaaaacaaaataccaaagaccaaaatcaaatattctatatttgcagggactaaaaccaaaaaaatattttta 22954660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 31579676 - 31579761
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagcc-aaacaaatattttta 186  Q
    |||||||||||| |||||||||||||||| || ||||| | ||| |||||||||||||| ||||||| || ||| |||||||||||    
T  31579676 attttacaaggattaaaacaaaataccaaagaccaaaatcaaatattttatatttgcagggactaaaaccaaaaaaaatattttta 31579761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 44483368 - 44483240
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaa-tatttttacgaggactgaaacc 200  Q
    |||||||||||| |||||||||||| ||| ||  |||||||| | || ||||||||||| || ||||  |||| ||| ||||||||   ||||| |||||    
T  44483368 attttacaaggattaaaacaaaatatcaaggactaaaaccaaatattctatatttgcagggattaaaatcaaaaaaaatatttttatagggactaaaacc 44483269  T
Q  201 aaaatgtcagatatttgcagagactattt 229  Q
    |||| ||||||||||||||| ||| ||||    
T  44483268 aaaacgtcagatatttgcagggaccattt 44483240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 40729201 - 40729135
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaa 168  Q
    |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| |||||||    
T  40729201 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaa 40729135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 24601 - 24673
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaa 174  Q
    |||||||||||| |||||||||||||||| || ||||||| ||| || ||| ||||||| ||||||| |||||    
T  24601 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccaaa 24673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 13426387 - 13426335
Alignment:
Q  178 atatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||  | ||| ||||||||||||||||||||||||| |||||||||    
T  13426387 atatttttacaggaactaaaaccaaaatgtcagatatttgcagggactatttt 13426335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 1e-86; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 17238177 - 17238407
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  17238177 tcatattgaaattggtcccaataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaattcaatatgaat 17238276  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||| ||||||||||| ||||||| ||||| || |||||||||  ||||| ||||    
T  17238277 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgcagggactaaaaccaaaaaattatttttacagggactaaaac 17238376  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  17238377 caaaatgtcagatatttgcagggactatttt 17238407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 30609106 - 30608876
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30609106 tcatattgaaattggtccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 30609007  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  30609006 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 30608907  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
     ||||| ||| |||||||||| |||||||||    
T  30608906 taaaatatcaaatatttgcagggactatttt 30608876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 5404713 - 5404943
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  5404713 tcatattgaaattagtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccgaatccaatatgaat 5404812  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||||||  |||| |||||||||||    |||| ||||    
T  5404813 caattttacaaggactaaaacaaaatactaatgaccaaaaccaaattttttatatttgcagggactaaaatcaaaaaaatatttttatagagactaaaac 5404912  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  5404913 caaaatgtcagatatttgcagggactatttt 5404943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 8926330 - 8926562
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8926330 tcatattgaaattggtccctataatattcattttagtcctcattttgagagactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 8926429  T
Q  101 caattttacaaggactaaaacaaa--ataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaa 197  Q
    ||||||||||||||||||||||||  |||| || || ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||    
T  8926430 caattttacaaggactaaaacaaaatatacaaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaa 8926529  T
Q  198 accaaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||| | | |||||||||    
T  8926530 accaaaatgtcagatatttaccgggactatttt 8926562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 3345259 - 3345030
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3345259 tcatattgaaattggtccctataatattcattttag-cctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 3345161  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||| | |||||||||||||||| || ||||||| |||||||||||||||||| ||||||| | ||| |||||||||||| |||||| ||||    
T  3345160 caattttacaagaagtaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacgaaaaaaatatttttacaaggactaaaac 3345061  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||| |||||||| ||||| |||||||||    
T  3345060 caaaatatcagatatctgcagggactatttt 3345030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 28853628 - 28853858
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||| |||||||||    
T  28853628 tcatattgaaattggtccatataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaagaaccaaatctaatatgaat 28853727  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||  |||||| ||||| |||||||||||   ||||| ||||    
T  28853728 caattttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaaccaaaaaaatatttttatagggactaaaac 28853827  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||| || |||||||||    
T  28853828 caaaatgtcagatatttgtagggactatttt 28853858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 8936587 - 8936819
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8936587 tcatattgaaattggtccctataatattcattttagtcctcgttttgagagactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 8936686  T
Q  101 caattttacaaggactaaaacaaa--ataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaa 197  Q
    ||||||||||||||||||||||||  |||| || || ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||    
T  8936687 caattttacaaggactaaaacaaaatatacaaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaa 8936786  T
Q  198 accaaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||| | | |||||||||    
T  8936787 accaaaatgtcagatatttaccgggactatttt 8936819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 16525336 - 16525566
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16525336 tcatattgaaattgatctctataatactcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 16525435  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||| ||||||||||||| || || ||||||| |||||||||||||| ||| ||||||| | ||| |||||||||||| |||||| || |    
T  16525436 caattttacaaggattaaaacaaaatacgaaggaccaaaaccaaattttttatatttacagggactaaaacaaaaaaaatatttttacaaggactaaatc 16525535  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||| ||||| |||||    
T  16525536 caaaatgtcagatatttgcggagacgatttt 16525566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 19661589 - 19661360
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  19661589 tcatgttgaaattggtccctataatattcattttagtcttcattttgagggactaaaatcaaatattctacatattacaaggaccaaattcaatatgaat 19661490  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||| ||||||||||||||||||| || ||||| | |||||||||||||||||| ||||||| ||||| ||||||||||||    ||| ||||    
T  19661489 caattttacaaagactaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaaccaaa-aaatatttttacagaaactaaaac 19661391  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  19661390 caaaatgtcagatatttgcagggactatttt 19661360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 5923970 - 5924201
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  5923970 tcatattgaaattggtccctagaatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccaaatccattatgaat 5924069  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc-caaacaaatatttttacgaggactgaaa 198  Q
    |||||||||||||||||||||||||||| || || ||||||| ||||||||||||||| || ||||||| |  ||| ||||||||||||  | ||| |||    
T  5924070 caattttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttgtagggactaaaacataaaaaaatatttttacaggaactaaaa 5924169  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||||||| |||||||||    
T  5924170 ccaaaatgtcagatatttgcagggactatttt 5924201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 29819529 - 29819736
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||      
T  29819529 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaattaaatattctacatattacaaggaccaaatccaatatgatc 29819628  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||   |||||||  |||| |||| |||||||   |||| ||||    
T  29819629 caattttacaaggactaaaacaaaataccaatgaccaaaaccaaattttttatatttgcttggactaaaatcaaaaaaatgtttttaccgagactaaaac 29819728  T
Q  200 caaaatgt 207  Q
    ||||||||    
T  29819729 caaaatgt 29819736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 31717318 - 31717492
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  31717318 tcatattgaaattggtccatataatattcattttagtcctcattttgagggactaaaaacaaatattctacatattacaaggaccaaatccaatatgaat 31717417  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaa 174  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||| |||||||||||| ||||||| |||||    
T  31717418 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaaccaaa 31717492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 33783637 - 33783409
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  33783637 tcatattgaaattggtccctataatattctttttagtcctcattttgagggactaaaatcaaatattctacatactacaaggaccaaattcaatatgaat 33783538  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc-caaacaaatatttttacgaggactgaaa 198  Q
    ||||||||||||||| ||||||||||| |||  | ||||||| |||||||||||||||||  ||||||| |  ||| ||||||||||||  | | |||||    
T  33783537 caattttacaaggacaaaaacaaaatatcaagaaccaaaaccaaattttttatatttgcaaggactaaaactaaaaaaaatatttttacaggaattgaaa 33783438  T
Q  199 ccaaaatgtcagatatttgcagagactat 227  Q
    ||||||| |||||||||||||| ||||||    
T  33783437 ccaaaatatcagatatttgcagggactat 33783409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 3484927 - 3485147
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||          ||     
T  3484927 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaa----------aac 3485016  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||||||  |||| |||||||||| |  ||||| ||||    
T  3485017 caattttacaaggactaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaatcaaaaaaatatttttgcagggactaaaac 3485116  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||| |||||||||| |||||||||    
T  3485117 caaaatgtcacatatttgcagggactatttt 3485147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 52 - 230
Target Start/End: Original strand, 26272174 - 26272353
Alignment:
Q  52 actaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaa-ccaatttttt 150  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||| | ||||||||    
T  26272174 actaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaatataccaaggaccaaaatcaaatttttt 26272273  T
Q  151 atatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||  |||||| ||||| | |||||||||   ||||| ||||||||||||||||||||| ||| |||||||||    
T  26272274 atatttgcaggaactaaaaccaaaaatatatttttatagggactaaaaccaaaatgtcagatatttacagggactatttt 26272353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 91 - 230
Target Start/End: Original strand, 9571629 - 9571769
Alignment:
Q  91 caatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaatttttt-atatttgcagcgactaaagccaaacaaatatttttacga 189  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||| ||| ||||| |||||||||| ||||||| ||||| ||||||||||||      
T  9571629 caatatgaatcaattttacaaggactaaaacaaaatacgaaggatcaaaatcaaatttttcatatttgcagggactaaaaccaaaaaaatatttttacag 9571728  T
Q  190 ggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    ||||| |||| |||||||||||||||||||  |||||||||    
T  9571729 ggactaaaactaaaatgtcagatatttgcaaggactatttt 9571769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 4601117 - 4601202
Alignment:
Q  22 taatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaatttt 107  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  4601117 taatattcattttagtctttattttgagggactaaaatcaaatattctacatattacaaggaccatatccaatatgaatcaatttt 4601202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 18502787 - 18502719
Alignment:
Q  52 actaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaa 120  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18502787 actaaaatcaaatattctacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaa 18502719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 8926356 - 8926198
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||| ||||||| ||||||| |    
T  8926356 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 8926257  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| ||||||||| || |||||||||| ||||| ||||    
T  8926256 caaaaaaatatttttatagggactaaaaccaaaacgtaagatatttgcggagaccattt 8926198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 8936613 - 8936455
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||| ||||||| ||||||| |    
T  8936613 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 8936514  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| ||||||||| || |||||||||| ||||| ||||    
T  8936513 caaaaaaatatttttatagggactaaaaccaaaacgtaagatatttgcggagaccattt 8936455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 3484953 - 3484803
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   ||||||||| || |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  3484953 atattatagggaccaatttcaatatgaaatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 3484854  T
Q  171 c-aaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcag 220  Q
    | ||| ||||||||||||   |||| |||||||||||| ||||||||||||    
T  3484853 caaaaaaaatatttttacacagactaaaaccaaaatgttagatatttgcag 3484803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 31717344 - 31717186
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||  ||||||| |    
T  31717344 atattatatggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggactaaaac 31717245  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||| | ||||||||| |||| |||||||||| ||| ||||    
T  31717244 caaaaaaatatttttatagggattaaaaccaaaacgtcaaatatttgcagggaccattt 31717186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 72 - 220
Target Start/End: Original strand, 33783611 - 33783761
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  33783611 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 33783710  T
Q  171 c-aaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcag 220  Q
    | ||| ||||||||||| | ||||| ||||| ||| | |||||||||||||    
T  33783711 caaaaaaaatatttttagggggactaaaaccgaaacgccagatatttgcag 33783761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 103 - 219
Target Start/End: Original strand, 19661594 - 19661711
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| |||||||  |||| |||||||||||   ||||| ||||||    
T  19661594 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaatcaaaaaaatatttttatagggactaaaacca 19661693  T
Q  202 aaatgtcagatatttgca 219  Q
    ||| | ||||||||||||    
T  19661694 aaacgccagatatttgca 19661711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 143 - 230
Target Start/End: Original strand, 5409181 - 5409268
Alignment:
Q  143 aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||||||||||| |||||||  |||| |||||||||||    |||| ||||||||||||||||||||||||| |||||||||    
T  5409181 aattttttatatttgcagggactaaaatcaaaaaaatatttttatagagactaaaaccaaaatgtcagatatttgcagggactatttt 5409268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 30609080 - 30609239
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||  ||||||| |    
T  30609080 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcatggactaaaac 30609179  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    | || |||||||||||   ||||| |||||||||   ||||||||||||| ||| |||||    
T  30609180 ccaaaaaatatttttatagggactaaaaccaaaacaccagatatttgcagggaccatttt 30609239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 3345233 - 3345391
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| ||||||||||||| || || ||||||| ||| || ||||||| |||  |||||| |    
T  3345233 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatgttctatatttacaggaactaaaac 3345332  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| ||||||||| | ||||||||||||| ||| ||||    
T  3345333 caaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccattt 3345391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 5923987 - 5923837
Alignment:
Q  81 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagcc-aaacaaa 178  Q
    ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||| ||||||| ||||||| || ||| |||    
T  5923987 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccaaaaaaaa 5923888  T
Q  179 tatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    ||||||||   ||||| ||||||||| |  |||||||||||| ||| ||||    
T  5923887 tatttttatagggactaaaaccaaaacgcaagatatttgcagggaccattt 5923837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 16525331 - 16525207
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| |||||||||||||||| ||| |||||| ||| |||||||||||||| ||||||| ||||| ||| |   |||   ||| | ||| ||    
T  16525331 attttacaaggattaaaacaaaataccaaagataaaaaccaaatattttatatttgcagggactaaaaccaaaaaaaaa---ttatagggattaaaagca 16525235  T
Q  202 aaatgtcagatatttgcagagactattt 229  Q
    ||| ||||||||||||||| ||||||||    
T  16525234 aaacgtcagatatttgcagggactattt 16525207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 220
Target Start/End: Complemental strand, 17238194 - 17238052
Alignment:
Q  81 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcg--actaaagccaaacaa 177  Q
    ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || |||||||| || |  |||||| ||||| ||    
T  17238194 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtagggatactaaaaccaaaaaa 17238095  T
Q  178 atatttttacgaggactgaaaccaaaatgtcagatatttgcag 220  Q
    | | |||| |  ||||| |||||||||| ||||||||||||||    
T  17238094 aaaattttgcagggactaaaaccaaaatatcagatatttgcag 17238052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 217
Target Start/End: Complemental strand, 28853654 - 28853507
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaac-caattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||| ||||| |||||||||||||||| || ||||||  ||| || ||||||||||| ||||||| |    
T  28853654 atattatatggaccaatttcaatatgaaatgattttagaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggactaaaac 28853555  T
Q  171 c-aaacaaatatttttacgaggactgaaaccaaaatgtcagatatttg 217  Q
    | ||| ||||||||||||  ||||| ||||||||| | || |||||||    
T  28853554 caaaaaaaatatttttacagggactaaaaccaaaacgccaaatatttg 28853507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 29819555 - 29819452
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  29819555 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 29819456  T
Q  171 caaa 174  Q
    ||||    
T  29819455 caaa 29819452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 229
Target Start/End: Complemental strand, 5140780 - 5140701
Alignment:
Q  150 tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    ||||||||||| |||||||  |||| ||||||||||    ||||| ||||||||||||||||||||||||| ||| ||||    
T  5140780 tatatttgcagggactaaaatcaaaaaaatatttttgtagggactaaaaccaaaatgtcagatatttgcagggaccattt 5140701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 5404708 - 5404667
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaa 144  Q
    |||||||||||| |||||||||||||||| || |||||||||    
T  5404708 attttacaaggattaaaacaaaataccaaggaccaaaaccaa 5404667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 159; Significance: 3e-84; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 4126 - 4355
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||||||| ||||||||    
T  4126 tcatattgaaattggtccctataatattcattttagtcctcgttttgagg-actaaaatcaaatattctacatattaaaaggagcaaatcctatatgaat 4224  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||| ||||    
T  4225 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaac 4324  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||||||||||||| |||||||||    
T  4325 caaaatgtcagatatttgcagggactatttt 4355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 4152 - 3994
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||||| |||| ||||||| ||| ||||||| |    
T  4152 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaattttctatatttacagggactaaaac 4053  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| |||||||||||   ||||| ||||||||| | ||||||||||||| ||| ||||    
T  4052 caaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccattt 3994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 156; Significance: 2e-82; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 43518 - 43287
Alignment:
Q  1 tcatattgaaattggtccc-tataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaa 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43518 tcatattgaaattggtcccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaa 43419  T
Q  100 tcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaa 198  Q
    ||||||||||||| |||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| | ||| | ||||||||||  ||||| |||    
T  43418 tcaattttacaagtactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacaaaaaatatatttttacagggactaaaa 43319  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||||| |||||||||| |||||||||    
T  43318 ccaaaatgtcaaatatttgcagggactatttt 43287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 43501 - 43640
Alignment:
Q  81 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaat 179  Q
    ||||||| | |||||||||   |||||||||||| |||||||||||||||| |||||||||| ||| || ||||||||||| ||||||| ||||| |||     
T  43501 ggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaaaccaaaaaaaa 43600  T
Q  180 atttttacgaggactgaaaccaaaatgtcagatatttgca 219  Q
    |  ||||   | ||| ||||||||| | ||||||||||||    
T  43601 aaatttataggaactaaaaccaaaacgccagatatttgca 43640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 153; Significance: 1e-80; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 212652 - 212422
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  212652 tcatattgaaattggttcctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 212553  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc--aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaa 198  Q
    ||||||||||||||||||||||||||||||| || |||||||  ||||||||| |||||||| |||| || ||||| ||||||||||||  ||||| |||    
T  212552 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaaatttttta-atttgcagggacttaaaccaaaaaaatatttttacagggactaaaa 212454  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
    |||||||||| ||||||||| | |||||||||    
T  212453 ccaaaatgtctgatatttgcggggactatttt 212422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 212657 - 212771
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| ||||||||||||| || || ||||||||| | || ||||||||||| ||||||| ||||| |||||||||||   ||||| ||||||    
T  212657 attttacaaggattaaaacaaaatacgaaagaccaaaaccaaatattctatatttgcagggactaaaaccaaaaaaatatttttatagggactaaaacca 212756  T
Q  202 aaatgtcagatattt 216  Q
    |||  ||||||||||    
T  212757 aaacatcagatattt 212771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 186654 - 186756
Alignment:
Q  22 taatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaac 121  Q
    ||||| ||||||||||||| |||||||||   |||||||||||| | ||||||||| |||||| || |  ||||| ||| |||||||| |||| |||||     
T  186654 taatactcattttagtccttattttgagggt-taaaatcaaatacttgacatattataaggactaattttaatataaataaattttactaggattaaaat 186752  T
Q  122 aaaa 125  Q
    ||||    
T  186753 aaaa 186756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 152; Significance: 4e-80; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 8782 - 8551
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  8782 tcatattgaaattggtccctaaaatattcattttaatcctcattttgagggactaaaatcaaatattctacatattacaaggactaaatccaatatgaat 8683  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggact-gaaa 198  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||  |||||  |||    
T  8682 caattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaa 8583  T
Q  199 ccaaaatgtcagatatttgcagagactatttt 230  Q
    ||||||||| |||||||||||| ||| |||||    
T  8582 ccaaaatgttagatatttgcagggacaatttt 8551  T

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Target: scaffold0170; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 8765 - 8871
Alignment:
Q  81 ggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaat 179  Q
    ||||||| | |||||||||   ||||||||| || |||||||||||||||| |||||||||| ||| || ||||||||||| ||||||| | ||| ||||    
T  8765 ggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggactaaaacaaaaaaaat 8864  T
Q  180 attttta 186  Q
    |||||||    
T  8865 attttta 8871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 134; Significance: 2e-69; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 118171 - 118395
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggacc-----aaatccaata 95  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||     ||||||||||    
T  118171 tcatattgaaattggtccctataatatttattttagtcctcattttgagggact-aaatcaaatattctacatattacaaggaccaaattaaatccaata 118269  T
Q  96 tgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggact 194  Q
    ||| |||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||  ||||     
T  118270 tgagtcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaaccaaaaaaatatttttacagggacg 118369  T
Q  195 gaaaccaaaatgtcagatatttgcag 220  Q
     |||||||||| ||||||||||||||    
T  118370 aaaaccaaaatatcagatatttgcag 118395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 118159 - 118040
Alignment:
Q  111 aggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaaaatgtca 209  Q
    |||| ||||||||||||| || ||||||||  || | || ||||||||||| ||||||| ||||| |||||||| || | ||||| || |||||| | ||    
T  118159 aggattaaaacaaaatacaaaggatcaaaattaaatattctatatttgcagggactaaaaccaaaaaaatatttatatggggactaaatccaaaacgcca 118060  T
Q  210 gatatttgcagagactattt 229  Q
    ||||||| ||| ||| ||||    
T  118059 gatatttacagggaccattt 118040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 127; Significance: 4e-65; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 74058 - 74286
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| ||| |||||||||||||||||||||||||| || || ||||| |||||||| |||| ||| ||| |||||||||||||||||||||||||||    
T  74058 tcatattaaaactggtccctataatattcattttagtcatcgttatgagggactaaaattaaattttctaca-attacaaggaccaaatccaatatgaat 74156  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||||||| || |||| || |||||||||||||||||| ||||||| ||||| ||||||||||   |||||| ||||    
T  74157 caattttacaaggactaaaacaaaataccaaggaccaaagccaaattttttatatttgcagggactaaaaccaaaaaaatattttttgaaggact-aaac 74255  T
Q  200 caaaatgtcagatatttgcagagactatttt 230  Q
    |||||||| |||||||||||| |||||||||    
T  74256 caaaatgttagatatttgcagggactatttt 74286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 125; Significance: 6e-64; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 36234 - 36014
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  36234 tcatattaaaattggtccttataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattacaaggaccgaatccaatatgaat 36135  T
Q  101 caattttacaaggactaaaacaaaataccaatgatcaaaa-ccaattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaac 199  Q
    ||||||||||||||||||||||||||| ||| || ||||| | |||||||||||||||||  ||||||| |||||  |||||| |||| | ||   ||||    
T  36134 caattttacaaggactaaaacaaaatatcaaagaccaaaatcaaattttttatatttgcaaggactaaaaccaaaacaatattcttacaaagatcaaaac 36035  T
Q  200 caaaatgtcagatatttgcag 220  Q
     ||||||||||||||||||||    
T  36034 gaaaatgtcagatatttgcag 36014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 36208 - 36366
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| ||||||||| |  ||||||||   |||||||||||| |||||||||||||||| |||||||||| ||| || |||||||||||  ||||||      
T  36208 atattataaggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcaggaactaaa-a 36306  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    |||| ||||| |||||   ||||| |||| |||| ||||||||||||||| |||||||||    
T  36307 caaaaaaataattttatagggactaaaactaaaacgtcagatatttgcagggactatttt 36366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 120; Significance: 5e-61; HSPs: 2)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 4627 - 4500
Alignment:
Q  1 tcatattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4627 tcatattgaaattggtccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattacaaggaccaaatccaatatgaat 4528  T
Q  101 caattttacaaggactaaaacaaaatac 128  Q
    ||||||||||||||||||||||||||||    
T  4527 caattttacaaggactaaaacaaaatac 4500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 4601 - 4759
Alignment:
Q  72 atattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaaacc-aattttttatatttgcagcgactaaagc 170  Q
    |||||| | ||||||| | |||||||||   |||||||||||| |||||||||||||||| || ||||||| ||| || ||||||||||| ||||||| |    
T  4601 atattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcagggactaaaac 4700  T
Q  171 caaacaaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactattt 229  Q
    |||| ||| |  ||||   ||||| ||||||||| |||| |||||||||| ||| ||||    
T  4701 caaaaaaaaaaatttatagggactaaaaccaaaacgtcaaatatttgcagggaccattt 4759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 92; Significance: 3e-44; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 25293 - 25458
Alignment:
Q  40 tcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaatgatcaaa 139  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || ||||    
T  25293 tcattttgagggactaaaatcaaatattctacatattacaaggatcaaatccaatatgaatcaattttacaaggactaaaataaaataccaaggaccaaa 25392  T
Q  140 acc--aattttttatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaaccaaaa 204  Q
    |||  || |||||| |||||||| ||||||| ||||| || |||||||||  ||||| |||||||||    
T  25393 accaaaaattttta-atttgcagggactaaaaccaaaaaattatttttacagggactaaaaccaaaa 25458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 25261 - 25147
Alignment:
Q  103 attttacaaggactaaaacaaaataccaatgatcaaaaccaattttt-tatatttgcagcgactaaagccaaacaaatatttttacgaggactgaaacca 201  Q
    |||||||||||| ||||||||||||| || || ||||||||| | || ||||||| ||| ||||||| ||||| |||||||||||   ||||| ||||||    
T  25261 attttacaaggattaaaacaaaatacgaaggaccaaaaccaaatattctatatttacagggactaaaaccaaaaaaatatttttatagggactaaaacca 25162  T
Q  202 aaatgtcagatattt 216  Q
    ||| |||| ||||||    
T  25161 aaacgtcaaatattt 25147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 11309 - 11187
Alignment:
Q  3 atattgaaattggtccctataatattcattttagtcctcattttgaggtactaaaatcaaatattcgacatattacaaggaccaaatccaatatgaatca 102  Q
    ||||||||| ||||| ||  |||||| ||||||||| | ||||||||| | |||||| |||||||| ||||||||||||||  ||||| |||||||||||    
T  11309 atattgaaagtggtctctcaaatatttattttagtctttattttgagggattaaaattaaatattctacatattacaaggattaaatctaatatgaatca 11210  T
Q  103 attttacaaggactaaaacaaaa 125  Q
    ||||| ||| || ||||| ||||    
T  11209 attttgcaaagaataaaaaaaaa 11187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 43987 - 44041
Alignment:
Q  176 aaatatttttacgaggactgaaaccaaaatgtcagatatttgcagagactatttt 230  Q
    |||||| |||||  ||||| |||||||||||||| |||||||||| |||||||||    
T  43987 aaatatatttacagggactaaaaccaaaatgtcaaatatttgcagggactatttt 44041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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