View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0541_low_4 (Length: 603)

Name: NF0541_low_4
Description: NF0541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0541_low_4
NF0541_low_4
[»] chr4 (58 HSPs)
chr4 (30-589)||(4741269-4741836)
chr4 (141-300)||(6382585-6382745)
chr4 (141-300)||(11027696-11027856)
chr4 (141-287)||(15987553-15987700)
chr4 (173-287)||(44317200-44317315)
chr4 (142-264)||(48459111-48459233)
chr4 (142-298)||(11123180-11123337)
chr4 (142-300)||(7608595-7608754)
chr4 (173-287)||(42907464-42907579)
chr4 (143-300)||(25265518-25265676)
chr4 (143-300)||(37348749-37348907)
chr4 (172-264)||(32596528-32596620)
chr4 (141-264)||(43892135-43892258)
chr4 (142-300)||(55826934-55827093)
chr4 (164-250)||(6482387-6482473)
chr4 (434-522)||(21714096-21714184)
chr4 (143-286)||(39046583-39046727)
chr4 (193-324)||(40420919-40421051)
chr4 (173-300)||(16216985-16217107)
chr4 (164-297)||(5902928-5903062)
chr4 (151-292)||(31918879-31919021)
chr4 (172-250)||(36918720-36918798)
chr4 (164-300)||(4766626-4766763)
chr4 (172-261)||(42299481-42299570)
chr4 (173-300)||(8844154-8844282)
chr4 (173-300)||(8857118-8857246)
chr4 (141-261)||(47550704-47550824)
chr4 (205-264)||(11172633-11172692)
chr4 (491-578)||(37384216-37384303)
chr4 (414-540)||(25265250-25265375)
chr4 (164-312)||(30034282-30034432)
chr4 (198-264)||(45064937-45065003)
chr4 (162-277)||(53910173-53910286)
chr4 (140-300)||(1724621-1724782)
chr4 (185-250)||(19534123-19534188)
chr4 (202-286)||(26564516-26564601)
chr4 (164-300)||(32585136-32585272)
chr4 (491-540)||(36919066-36919115)
chr4 (164-264)||(10286915-10287015)
chr4 (198-250)||(30266715-30266767)
chr4 (198-250)||(30285421-30285473)
chr4 (196-264)||(41915336-41915404)
chr4 (492-540)||(50376454-50376502)
chr4 (193-264)||(19549308-19549379)
chr4 (142-300)||(21423486-21423645)
chr4 (491-589)||(33516125-33516224)
chr4 (491-522)||(42907830-42907861)
chr4 (193-264)||(44887582-44887653)
chr4 (142-232)||(3737422-3737512)
chr4 (491-533)||(9280999-9281041)
chr4 (164-250)||(43309114-43309200)
chr4 (499-540)||(12075734-12075775)
chr4 (416-481)||(55293386-55293451)
chr4 (196-264)||(14606278-14606346)
chr4 (196-264)||(31416283-31416351)
chr4 (199-263)||(37926182-37926246)
chr4 (434-522)||(39086042-39086130)
chr4 (202-250)||(39375026-39375074)
[»] chr2 (39 HSPs)
chr2 (142-298)||(10208742-10208899)
chr2 (142-307)||(36128411-36128577)
chr2 (141-300)||(30846563-30846723)
chr2 (141-287)||(37473053-37473200)
chr2 (164-300)||(24414442-24414579)
chr2 (142-300)||(13830355-13830514)
chr2 (434-540)||(13531831-13531936)
chr2 (151-264)||(9632026-9632139)
chr2 (141-287)||(7314973-7315120)
chr2 (491-589)||(25210315-25210414)
chr2 (491-593)||(30696862-30696965)
chr2 (141-250)||(11009097-11009206)
chr2 (173-300)||(37999135-37999263)
chr2 (193-264)||(10920333-10920404)
chr2 (164-264)||(22900428-22900528)
chr2 (193-301)||(29657104-29657213)
chr2 (188-264)||(13705709-13705785)
chr2 (142-250)||(15546313-15546421)
chr2 (491-588)||(17845444-17845543)
chr2 (174-273)||(17845779-17845879)
chr2 (142-250)||(31942516-31942624)
chr2 (174-262)||(35248790-35248878)
chr2 (225-300)||(45115283-45115359)
chr2 (164-298)||(6028201-6028336)
chr2 (141-264)||(26755352-26755475)
chr2 (202-287)||(8916259-8916345)
chr2 (173-262)||(13954336-13954425)
chr2 (173-262)||(14095543-14095632)
chr2 (164-249)||(18106441-18106526)
chr2 (492-533)||(34544420-34544461)
chr2 (196-264)||(18485312-18485380)
chr2 (202-264)||(35336296-35336358)
chr2 (196-250)||(38342906-38342960)
chr2 (159-264)||(16227037-16227142)
chr2 (491-579)||(29656797-29656886)
chr2 (142-214)||(37319563-37319636)
chr2 (196-249)||(42576250-42576303)
chr2 (196-264)||(3546814-3546882)
chr2 (493-529)||(33174333-33174369)
[»] chr7 (53 HSPs)
chr7 (139-298)||(35074090-35074249)
chr7 (142-264)||(17851489-17851611)
chr7 (142-300)||(38152524-38152683)
chr7 (142-287)||(43507057-43507202)
chr7 (139-287)||(10072109-10072258)
chr7 (164-300)||(18125538-18125675)
chr7 (173-297)||(45886078-45886203)
chr7 (173-300)||(3156680-3156808)
chr7 (165-285)||(4101120-4101240)
chr7 (416-540)||(6557828-6557952)
chr7 (141-264)||(10996194-10996317)
chr7 (168-298)||(23533976-23534107)
chr7 (142-300)||(25905252-25905411)
chr7 (150-300)||(44986208-44986358)
chr7 (141-325)||(29292250-29292435)
chr7 (173-297)||(30650285-30650410)
chr7 (151-264)||(33840707-33840820)
chr7 (164-299)||(7779653-7779791)
chr7 (164-264)||(8265431-8265531)
chr7 (140-287)||(38140113-38140261)
chr7 (173-287)||(24752688-24752803)
chr7 (142-261)||(41103267-41103386)
chr7 (193-298)||(17884907-17885013)
chr7 (173-281)||(5432365-5432474)
chr7 (164-300)||(21702325-21702462)
chr7 (142-250)||(5567502-5567610)
chr7 (196-264)||(27062631-27062699)
chr7 (193-300)||(46127473-46127581)
chr7 (196-300)||(43217938-43218043)
chr7 (204-300)||(44794336-44794433)
chr7 (151-299)||(3227858-3228001)
chr7 (164-264)||(3773648-3773748)
chr7 (196-264)||(30839503-30839571)
chr7 (209-300)||(31425671-31425763)
chr7 (173-300)||(41741759-41741887)
chr7 (142-300)||(2632279-2632436)
chr7 (202-299)||(23328294-23328392)
chr7 (196-250)||(27062804-27062858)
chr7 (204-300)||(16865855-16865952)
chr7 (196-264)||(18683630-18683698)
chr7 (202-250)||(25783262-25783310)
chr7 (173-300)||(25980234-25980361)
chr7 (140-264)||(42908398-42908522)
chr7 (218-300)||(17885146-17885229)
chr7 (443-522)||(31345420-31345499)
chr7 (202-287)||(37196311-37196397)
chr7 (173-300)||(39316649-39316776)
chr7 (185-250)||(5376753-5376818)
chr7 (208-328)||(6558062-6558182)
chr7 (491-540)||(11472814-11472863)
chr7 (173-250)||(18826231-18826308)
chr7 (204-300)||(37578949-37579046)
chr7 (193-300)||(29855753-29855861)
[»] chr3 (35 HSPs)
chr3 (140-287)||(39728299-39728447)
chr3 (142-300)||(44252360-44252519)
chr3 (164-300)||(23154317-23154454)
chr3 (142-300)||(34154035-34154194)
chr3 (164-300)||(44107109-44107246)
chr3 (142-298)||(44638894-44639051)
chr3 (142-300)||(7470088-7470246)
chr3 (141-250)||(30616665-30616774)
chr3 (174-300)||(34025610-34025737)
chr3 (173-299)||(49025332-49025459)
chr3 (166-263)||(30905172-30905269)
chr3 (142-250)||(6738733-6738841)
chr3 (164-287)||(29283976-29284100)
chr3 (172-298)||(31127107-31127234)
chr3 (202-300)||(44179006-44179105)
chr3 (142-232)||(44162403-44162493)
chr3 (193-300)||(17146460-17146568)
chr3 (142-250)||(42758019-42758127)
chr3 (202-300)||(48391120-48391219)
chr3 (491-533)||(37032207-37032249)
chr3 (145-250)||(16841623-16841728)
chr3 (164-300)||(23580469-23580605)
chr3 (142-263)||(37032514-37032635)
chr3 (164-300)||(49579705-49579842)
chr3 (173-305)||(52197802-52197935)
chr3 (196-260)||(23329834-23329898)
chr3 (142-250)||(23547339-23547447)
chr3 (196-264)||(40796507-40796574)
chr3 (219-298)||(48306848-48306928)
chr3 (218-273)||(4016371-4016426)
chr3 (202-249)||(55439041-55439088)
chr3 (151-256)||(38347216-38347315)
chr3 (202-264)||(39655610-39655672)
chr3 (193-250)||(27252183-27252240)
chr3 (196-264)||(2487444-2487512)
[»] chr1 (49 HSPs)
chr1 (164-300)||(50426965-50427101)
chr1 (142-300)||(20774251-20774410)
chr1 (142-300)||(40087768-40087927)
chr1 (142-300)||(18354383-18354540)
chr1 (142-263)||(5180670-5180791)
chr1 (141-300)||(13390073-13390233)
chr1 (173-300)||(34610724-34610852)
chr1 (164-300)||(24710499-24710636)
chr1 (164-264)||(23493672-23493772)
chr1 (142-264)||(42439982-42440104)
chr1 (152-264)||(8880020-8880131)
chr1 (151-250)||(44792633-44792732)
chr1 (492-576)||(43513094-43513179)
chr1 (196-264)||(19892624-19892692)
chr1 (164-299)||(28297574-28297710)
chr1 (142-300)||(32594515-32594674)
chr1 (151-292)||(16903132-16903274)
chr1 (202-287)||(17092283-17092369)
chr1 (174-287)||(24237084-24237198)
chr1 (193-262)||(17134617-17134686)
chr1 (150-250)||(5293815-5293915)
chr1 (141-300)||(23966476-23966636)
chr1 (434-522)||(39219139-39219227)
chr1 (202-292)||(29936096-29936187)
chr1 (151-250)||(44615837-44615936)
chr1 (193-264)||(51421565-51421636)
chr1 (440-589)||(5283645-5283795)
chr1 (499-549)||(23719549-23719599)
chr1 (202-264)||(34673606-34673668)
chr1 (142-264)||(36187569-36187691)
chr1 (206-300)||(13020370-13020465)
chr1 (154-227)||(14892337-14892410)
chr1 (193-250)||(29871645-29871702)
chr1 (491-540)||(33293622-33293671)
chr1 (161-262)||(43513392-43513493)
chr1 (142-250)||(25155257-25155365)
chr1 (205-264)||(19572842-19572901)
chr1 (142-300)||(45866496-45866655)
chr1 (491-533)||(13692582-13692624)
chr1 (218-287)||(38686348-38686418)
chr1 (491-533)||(47644968-47645010)
chr1 (142-232)||(49251111-49251201)
chr1 (491-540)||(2581511-2581559)
chr1 (167-224)||(35937204-35937261)
chr1 (203-264)||(45460396-45460457)
chr1 (142-246)||(9983251-9983355)
chr1 (152-248)||(12719144-12719240)
chr1 (492-540)||(16903454-16903502)
chr1 (196-264)||(35077551-35077619)
[»] chr6 (27 HSPs)
chr6 (142-300)||(3484233-3484392)
chr6 (139-300)||(32853460-32853622)
chr6 (161-300)||(32052694-32052834)
chr6 (142-299)||(10142828-10142986)
chr6 (142-285)||(9442268-9442412)
chr6 (141-287)||(5863695-5863842)
chr6 (142-300)||(10188384-10188543)
chr6 (142-287)||(12141016-12141162)
chr6 (141-298)||(24225319-24225476)
chr6 (151-264)||(34179417-34179529)
chr6 (164-264)||(3244992-3245092)
chr6 (188-307)||(14254625-14254745)
chr6 (174-264)||(9402194-9402284)
chr6 (142-287)||(27534314-27534460)
chr6 (140-300)||(2366943-2367104)
chr6 (196-264)||(9458371-9458439)
chr6 (413-533)||(10925552-10925672)
chr6 (197-264)||(2127030-2127097)
chr6 (164-250)||(14505740-14505826)
chr6 (196-264)||(20611257-20611325)
chr6 (142-292)||(1948169-1948319)
chr6 (164-263)||(10925853-10925952)
chr6 (491-522)||(34179129-34179160)
chr6 (414-520)||(34346136-34346242)
chr6 (491-559)||(9402526-9402595)
chr6 (196-264)||(29200249-29200317)
chr6 (202-250)||(30815930-30815978)
[»] chr8 (40 HSPs)
chr8 (164-264)||(6388912-6389012)
chr8 (142-264)||(17220336-17220458)
chr8 (142-287)||(24927568-24927714)
chr8 (142-300)||(33633292-33633451)
chr8 (164-305)||(2076141-2076283)
chr8 (142-300)||(17468875-17469034)
chr8 (142-300)||(32302679-32302838)
chr8 (142-300)||(34301464-34301623)
chr8 (142-264)||(5858804-5858926)
chr8 (142-264)||(27058677-27058799)
chr8 (151-300)||(34776090-34776240)
chr8 (164-300)||(39445872-39446009)
chr8 (164-299)||(4231030-4231166)
chr8 (492-540)||(17108314-17108362)
chr8 (176-301)||(1063162-1063288)
chr8 (152-301)||(30481725-30481875)
chr8 (193-264)||(24870370-24870441)
chr8 (142-300)||(28977424-28977583)
chr8 (204-286)||(36132239-36132322)
chr8 (202-287)||(11255328-11255414)
chr8 (414-540)||(29918467-29918593)
chr8 (142-264)||(40248689-40248811)
chr8 (491-540)||(5793522-5793571)
chr8 (491-540)||(6388607-6388656)
chr8 (141-250)||(14185962-14186071)
chr8 (196-261)||(15068958-15069023)
chr8 (202-263)||(27932114-27932175)
chr8 (173-250)||(28345082-28345158)
chr8 (164-279)||(9642698-9642814)
chr8 (200-264)||(15174220-15174284)
chr8 (205-264)||(2190229-2190288)
chr8 (174-300)||(29109128-29109255)
chr8 (218-264)||(14687128-14687174)
chr8 (164-233)||(18151096-18151165)
chr8 (491-591)||(30903983-30904084)
chr8 (493-533)||(11880867-11880907)
chr8 (493-533)||(11898283-11898323)
chr8 (164-264)||(17084517-17084617)
chr8 (193-300)||(20399306-20399414)
chr8 (181-287)||(34021134-34021242)
[»] chr5 (40 HSPs)
chr5 (142-287)||(17853604-17853749)
chr5 (150-300)||(22695212-22695363)
chr5 (173-299)||(40517457-40517584)
chr5 (151-264)||(3565067-3565179)
chr5 (173-300)||(5908993-5909121)
chr5 (193-300)||(6093416-6093524)
chr5 (196-250)||(34258902-34258956)
chr5 (164-287)||(6156234-6156358)
chr5 (141-300)||(6369312-6369471)
chr5 (193-264)||(18452294-18452366)
chr5 (142-300)||(15889830-15889989)
chr5 (142-264)||(30996217-30996338)
chr5 (164-230)||(38972506-38972572)
chr5 (156-292)||(4920465-4920602)
chr5 (141-298)||(10126725-10126884)
chr5 (164-300)||(20973796-20973933)
chr5 (196-264)||(23045361-23045429)
chr5 (142-300)||(33862493-33862659)
chr5 (491-550)||(35584054-35584113)
chr5 (202-250)||(42717987-42718035)
chr5 (491-589)||(16311346-16311444)
chr5 (202-300)||(28045331-28045430)
chr5 (491-589)||(29664908-29665007)
chr5 (176-298)||(42987790-42987913)
chr5 (164-262)||(1218428-1218526)
chr5 (189-263)||(12712875-12712949)
chr5 (173-270)||(12235833-12235930)
chr5 (230-297)||(29664619-29664687)
chr5 (202-262)||(36579601-36579661)
chr5 (173-299)||(12834888-12835015)
chr5 (164-250)||(38006832-38006918)
chr5 (206-263)||(2984832-2984889)
chr5 (167-300)||(8453682-8453818)
chr5 (173-230)||(24207290-24207347)
chr5 (491-540)||(38972859-38972908)
chr5 (193-264)||(12457126-12457198)
chr5 (189-300)||(12774101-12774213)
chr5 (198-250)||(12915125-12915177)
chr5 (204-287)||(35194301-35194385)
chr5 (141-300)||(35311435-35311595)
[»] scaffold0015 (1 HSPs)
scaffold0015 (196-264)||(56266-56334)
[»] scaffold0095 (1 HSPs)
scaffold0095 (164-300)||(32834-32971)
[»] scaffold0294 (1 HSPs)
scaffold0294 (202-250)||(14456-14504)
[»] scaffold0189 (1 HSPs)
scaffold0189 (174-300)||(3909-4036)
[»] scaffold0036 (1 HSPs)
scaffold0036 (142-300)||(33014-33173)
[»] scaffold0022 (1 HSPs)
scaffold0022 (161-299)||(90235-90374)
[»] scaffold0244 (1 HSPs)
scaffold0244 (142-232)||(5022-5112)
[»] scaffold0014 (1 HSPs)
scaffold0014 (174-300)||(14455-14581)
[»] scaffold0519 (1 HSPs)
scaffold0519 (202-287)||(9981-10067)
[»] scaffold0008 (2 HSPs)
scaffold0008 (174-264)||(67377-67467)
scaffold0008 (174-264)||(75220-75310)
[»] scaffold0007 (1 HSPs)
scaffold0007 (164-249)||(199155-199240)
[»] scaffold1322 (2 HSPs)
scaffold1322 (491-533)||(1048-1090)
scaffold1322 (172-261)||(700-789)
[»] scaffold0264 (1 HSPs)
scaffold0264 (491-533)||(17564-17606)
[»] scaffold0005 (1 HSPs)
scaffold0005 (196-264)||(211032-211100)


Alignment Details
Target: chr4 (Bit Score: 427; Significance: 0; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 30 - 589
Target Start/End: Complemental strand, 4741836 - 4741269
Alignment:
Q  30 gatttatgctttagaattgaggcacgatgctgaattccttggtaattgattttcctatccttttcagcatcaaaatagcctaaaattacttaaaacatta 129  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4741836 gatttatgctttagaattgaggcacgatgctaaattccttggtaattgattttcctatccttttcagcatcaaaatagcctaaaattacttaaaacatta 4741737  T
Q  130 ctacataaagcctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctaccc 229  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||    
T  4741736 ctacataaagcctaggcattacaatggg-cagggtggggacaagttttaccttctccatccctataccctactctcatatacttactagctaccctaccc 4741638  T
Q  230 atattcaacagggatgagaaagcgaatctcatcccatccccgactggttcaggtatcctcgcctcatccccctctctgtagtggacaatattttttaatn 329  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  4741637 atatttaacagggatgagaaatcgaatctcatcccatccccgactggttcaggtatcctcgccccatccccctctctgtagtggacaatattttttaata 4741538  T
Q  330 nnnnnngaaatattgtttattcattatcctacaaagagattatgacaattgatggctatggtgacagggaaga--------gagagtacgagtatggaac 421  Q
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| |||||||||||    
T  4741537 aaaaaagaaatattgtttattcattatcctacaaagagattatgacaattgatggctatggtgacagggaagagaaagaccgagagtaagagtatggaac 4741438  T
Q  422 gagaagagat-aaaactttgagaagtgagtgtcatctaagaaattgagactatgattgtgttcgaggaacgatttagggtttgagtttctatttatataa 520  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  4741437 gagaagagataaaaactttgagaagtgagtgtcatctgagaaattgagactatgattgtgtgagaggaacgatttagggtttgagtttctatttatataa 4741338  T
Q  521 aatggataataaactgatttgtacattcgaaacaggtttttgtatgagtttgaggtgggtacttatatc 589  Q
    ||||||||||||| |||||| |||||||| ||| |||||||||||| ||| | ||||||||||||||||    
T  4741337 aatggataataaattgatttatacattcggaacgggtttttgtatgggttcggggtgggtacttatatc 4741269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 141 - 300
Target Start/End: Complemental strand, 6382745 - 6382585
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | || |||||||  ||||||||||| |||  || |||||| | ||||||||||||||  |||||||||||||||| |||| |    
T  6382745 ctaggcatggcaatggggcggggtggggaccggttttaccttccccgcccccatacccgattctcatatacttacccgttaccctacccatatccaacgg 6382646  T
Q  241 ggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||||  ||||||||| ||| ||||| || ||||| ||||||| |||| |||||||    
T  6382645 ggatgagaaattgaatctcatccccgtccccaacgggttcgggtatccccgccccatcccc 6382585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 11027696 - 11027856
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | || |||||||  ||||||||||| |||| |  |||||  | ||||||||||||||| |||||||||||||||  | || |    
T  11027696 ctaggcatggcaatggggcggggtggggacgggttttaccttccccgtcctcatacctgattctcatatacttactcgttaccctacccataccctacgg 11027795  T
Q  241 ggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||||  ||||||||| ||| |||||||| ||||| ||||||| ||||||||||||    
T  11027796 ggatgagaaattgaatctcatccccgtccccgacaggttcgggtatccccgcctcatcccc 11027856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 15987700 - 15987553
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | || ||||||| ||||||||||||  ||| || |||| | | ||||||||||||||  |||||||||||||||| |||| |    
T  15987700 ctaggcatggcaatggggcggggtggggacgagttttaccttcctcgtccccatactcgattctcatatacttacctgttaccctacccatatccaacgg 15987601  T
Q  241 ggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    ||||||||||  ||||||||| ||| |||||||| ||||| |||||||    
T  15987600 ggatgagaaattgaatctcatccccgtccccgacgggttcgggtatcc 15987553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 173 - 287
Target Start/End: Original strand, 44317200 - 44317315
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccg 271  Q
    ||||||||||| |||| || |||||| | ||||||||||||||  ||||||||||||||| ||||| |||||||||||  ||||| ||| ||||||||||    
T  44317200 gttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacccatactcaacggggatgagaaattgaatcccatccccatccccg 44317299  T
Q  272 actggttcaggtatcc 287  Q
    || ||||| |||||||    
T  44317300 acgggttcgggtatcc 44317315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 48459111 - 48459233
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    ||||||| |||||||||  || |||||||  |||||||||||||| | || |||||| | ||||||||||||||  |||||||||| |||| ||||| ||    
T  48459111 taggcatgacaatgggaaggggtggggacgggttttaccttctccatccccatacccgattctcatatacttacccgttaccctactcatactcaacggg 48459210  T
Q  242 gatgagaaagcgaatctcatccc 264  Q
    |||||||||  ||||||||||||    
T  48459211 gatgagaaattgaatctcatccc 48459233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 298
Target Start/End: Complemental strand, 11123337 - 11123180
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| ||||||| |||||| | ||||||||||||||  |||||||||||||||| |||| |     
T  11123337 taggcatggcaatggggcggggtggggacgggttttaccttccccgttcccatacccgattctcatatacttacctgttaccctacccatatccaacgga 11123238  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcc 298  Q
    ||||| |||  ||||| ||| ||| |||||||| ||||| ||||||| |||| |||||    
T  11123237 gatgataaattgaatcacatccccgtccccgacgggttcgggtatccccgccccatcc 11123180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 7608595 - 7608754
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||| |||| ||    
T  7608595 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacccatatccaacggg 7608694  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||| ||| ||| |||||||  ||||| ||||||| |||  |||||||    
T  7608695 gatgagaaattgaatcccatccccgtccccgaggggttcgggtatccccgcaccatcccc 7608754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 173 - 287
Target Start/End: Original strand, 42907464 - 42907579
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccg 271  Q
    ||||||||||| ||||||  |||| ||| ||||||||||||||  |||||||||| |||| ||| | ||||||||||| |||||||||| |||||||| |    
T  42907464 gttttaccttccccgttcgcatacactattctcatatacttacccgttaccctactcataatcagcggggatgagaaatcgaatctcatccccatcccag 42907563  T
Q  272 actggttcaggtatcc 287  Q
    || ||||| |||||||    
T  42907564 acgggttcgggtatcc 42907579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 143 - 300
Target Start/End: Complemental strand, 25265676 - 25265518
Alignment:
Q  143 aggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacaggg 242  Q
    |||||| |||||||| | ||||||||||||| ||||||||| | || || |||| |||||| ||||||||||| |||||||| |||||||  || | |||    
T  25265676 aggcatgacaatggggcgggatggggacaaggtttaccttccctgtccccatactctactcccatatacttaccagttacccaacccatacccagcgggg 25265577  T
Q  243 atgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||  ||||| ||| ||| | |||| | ||||| ||||||| |||| |||||||    
T  25265576 atgagaaatggaatcccatccccgtacccggcgggttcgggtatccccgccccatcccc 25265518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 143 - 300
Target Start/End: Original strand, 37348749 - 37348907
Alignment:
Q  143 aggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacaggg 242  Q
    |||||| |||||||| | || | |||||  ||||||| |||||||| || |||||| | |||| |||||||||  |||||||||||||||  |||| |||    
T  37348749 aggcatgacaatggggcggggtagggacgggttttacattctccgtccccatacccgattctcttatacttacctgttaccctacccatacccaacgggg 37348848  T
Q  243 atgagaaagcgaatctcatcc-catccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||  |||  |||||| | |||||||| ||||| ||||||| ||||||||||||    
T  37348849 atgagaaattgaacttcatcctcgtccccgacgggttcgggtatccccgcctcatcccc 37348907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 264
Target Start/End: Complemental strand, 32596620 - 32596528
Alignment:
Q  172 agttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    ||||||||||||||||| || ||| |  | ||||||||||||||| ||||||||||||||||||||| ||||| |||||  |||| |||||||    
T  32596620 agttttaccttctccgtccccatatctaattctcatatacttacttgttaccctacccatattcaacggggataagaaattgaatttcatccc 32596528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 141 - 264
Target Start/End: Original strand, 43892135 - 43892258
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||||| ||||||||||   |||||||||| ||||  | |||||| | ||||||||||||||   ||||| ||||||||| |||| |    
T  43892135 ctaggcatggcaatgggacgggatggggacggattttaccttccccgtctccatacccaattctcatatacttacccattaccttacccatatccaacgg 43892234  T
Q  241 ggatgagaaagcgaatctcatccc 264  Q
    ||||||||||  ||||||||||||    
T  43892235 ggatgagaaattgaatctcatccc 43892258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 55827093 - 55826934
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| |||| || |||||  | |||||||||||||   |||||||||||||||| |||  ||    
T  55827093 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccataccggattctcatatacttatctgttaccctacccatatccaatggg 55826994  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||||||| ||| |||||||| ||||| ||||||| |||  |||||||    
T  55826993 gatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgctccatcccc 55826934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 6482473 - 6482387
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    |||||||  ||||||| ||| ||||||| |||||| | ||||||||||||||  |||||||||||||||| |||| |||||||||||    
T  6482473 tggggacgggttttacattccccgttcccatacccgattctcatatacttacccgttaccctacccatatccaacggggatgagaaa 6482387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 434 - 522
Target Start/End: Complemental strand, 21714184 - 21714096
Alignment:
Q  434 aactttgagaagtgagtgtcatctaagaaattgagactatgattgtgttcgaggaacgatttagggtttgagtttctatttatataaaa 522  Q
    |||| ||||||||||||||||| | ||| | ||||||| | |||||||  | | || ||||||||||||||||||||||||||||||||    
T  21714184 aactatgagaagtgagtgtcatttgagagactgagactctaattgtgtaagtgaaatgatttagggtttgagtttctatttatataaaa 21714096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 143 - 286
Target Start/End: Original strand, 39046583 - 39046727
Alignment:
Q  143 aggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacaggg 242  Q
    |||||| |||||||||| || |||||||  ||||||||||  |||| || |||||| | ||| ||||||||||| |||| |||||| |||| |||| |||    
T  39046583 aggcatgacaatgggacggggtggggacgggttttacctttcccgtccccatacccgattcttatatacttactcgttatcctacctatatccaacgggg 39046682  T
Q  243 atgagaaagcgaatctcat-cccatccccgactggttcaggtatc 286  Q
    ||||||||  |||||  || ||| |||||||| ||||| ||||||    
T  39046683 atgagaaattgaatcgtatccccgtccccgacgggttcgggtatc 39046727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 193 - 324
Target Start/End: Complemental strand, 40421051 - 40420919
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc-atccccgactggttcaggtatcctcgc 291  Q
    |||||||||| ||||||| ||||  ||||||| ||||||  ||| ||||||||||||| |||| ||||||||  |||| ||| |||||  ||||||||||    
T  40421051 ataccctactttcatataattacctgttaccccacccattctcagcagggatgagaaatcgaaactcatccctgtccctgacgggttcgagtatcctcgc 40420952  T
Q  292 ctcatccccctctctgtagtggacaatattttt 324  Q
    ||||| | | || | |||||||| |||||||||    
T  40420951 ctcatacgcatccccgtagtggataatattttt 40420919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 300
Target Start/End: Complemental strand, 16217107 - 16216985
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcccatccccga 272  Q
    ||||||||||| |||| || ||| || | ||||||||||||||  |||||||||||||||  |||| |||||||||||  ||     |||||||||||||    
T  16217107 gttttaccttccccgtccccatatccgattctcatatacttacccgttaccctacccatacccaacggggatgagaaattga-----atcccatccccga 16217013  T
Q  273 ctggttcaggtatcctcgcctcatcccc 300  Q
    | ||||| ||||||| |||| |||||||    
T  16217012 cgggttcgggtatccccgccccatcccc 16216985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 164 - 297
Target Start/End: Complemental strand, 5903062 - 5902928
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  ||||||||||| || | || |||||| | ||||||||||||||  |||||||||||||||| ||||  ||||||||||  ||||| ||| |    
T  5903062 tggggacgggttttaccttccccatccccatacccgattctcatatacttacccgttaccctacccatatccaacgaggatgagaaattgaatcccatcc 5902963  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatc 297  Q
    || |||| ||| ||||| ||||||| |||| ||||    
T  5902962 ccgtccctgacgggttcgggtatccccgccccatc 5902928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 151 - 292
Target Start/End: Complemental strand, 31919021 - 31918879
Alignment:
Q  151 caatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| | || |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  ||||||||| |||||  |||| |||||||||||    
T  31919021 caatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctatccatacccaacggggatgagaaa 31918922  T
Q  251 gcgaatctcat-cccatccccgactggttcaggtatcctcgcc 292  Q
      ||||| ||| ||| |||||||  ||||| ||||||| ||||    
T  31918921 ttgaatcccatccccgtccccgatgggttcgggtatccccgcc 31918879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 36918720 - 36918798
Alignment:
Q  172 agttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    |||||||||||| |||| || |||||||||||||||||||||||  ||||||||  |||||| || | |||||||||||    
T  36918720 agttttaccttccccgtccccataccctactctcatatacttacctgttaccctgtccatatccagcggggatgagaaa 36918798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 4766763 - 4766626
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  ||||||||||| |||| || ||| || | ||||||||||||||  ||||||||| |||||  |||| | |||||||||  ||||||||| |    
T  4766763 tggggacgtgttttaccttccccgtccccatatccgattctcatatacttacctgttaccctatccatacccaacggagatgagaaattgaatctcatcc 4766664  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    || |||  ||| ||||| |||||||| |||||||||||    
T  4766663 ccgtccttgacgggttcgggtatccttgcctcatcccc 4766626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 42299481 - 42299570
Alignment:
Q  172 agttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat 261  Q
    |||||||| ||| |||| || |||||| | ||||||||||||||| |||||||||||||||   ||| |||||||||||  |||||||||    
T  42299481 agttttacattccccgtccccatacccgattctcatatacttactcgttaccctacccataccaaacggggatgagaaattgaatctcat 42299570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 300
Target Start/End: Complemental strand, 8844282 - 8844154
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccg 271  Q
    ||||||||||| |||| || |||||||| || ||||||||||  |||||||||| || ||  || | ||||||||||| | |||||||| ||| |||| |    
T  8844282 gttttaccttccccgtccccataccctaatcccatatacttatcagttaccctatccgtagccagcggggatgagaaatcaaatctcatccccgtccctg 8844183  T
Q  272 actggttcaggtatcctcgcctcatcccc 300  Q
    || ||||| ||||| | ||||||||||||    
T  8844182 acgggttcgggtattcccgcctcatcccc 8844154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 300
Target Start/End: Complemental strand, 8857246 - 8857118
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccg 271  Q
    ||||||||||| |||| || |||||||| || ||||||||||  |||||||||| || ||  || | ||||||||||| | |||||||| ||| |||| |    
T  8857246 gttttaccttccccgtccccataccctaatcccatatacttatcagttaccctatccgtagccagcggggatgagaaatcaaatctcatccccgtccctg 8857147  T
Q  272 actggttcaggtatcctcgcctcatcccc 300  Q
    || ||||| ||||| | ||||||||||||    
T  8857146 acgggttcgggtattcccgcctcatcccc 8857118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 47550824 - 47550704
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | || |||||||  ||||||||||| |||| || |||||| | |||| |||||||||  ||||||||| |||||  |||| |    
T  47550824 ctaggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcgtatacttacccgttaccctatccatacccaacgg 47550725  T
Q  241 ggatgagaaagcgaatctcat 261  Q
    ||||||||||  |||||||||    
T  47550724 ggatgagaaattgaatctcat 47550704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 11172633 - 11172692
Alignment:
Q  205 catatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||  ||||| ||||||    
T  11172633 catatacttacttgttaccctacccatatccaacggggatgagaaattgaatcccatccc 11172692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 578
Target Start/End: Original strand, 37384216 - 37384303
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactgatttgtacattcgaaacaggtttttgtatgagtttgaggtgg 578  Q
    ||||||||||||||  |||||||||||||||| |||||||||| |||||| || ||| |  || ||||| |||||| ||||| |||||    
T  37384216 gatttagggtttgaacttctatttatataaaagggataataaattgatttctatatttgggacgggtttgtgtatgggtttggggtgg 37384303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 540
Target Start/End: Complemental strand, 25265375 - 25265250
Alignment:
Q  414 tatggaacgagaagagataaaactttgagaagtgagtgtcatctaagaaattgagactatgattgtgttcgaggaacgatttagggtttgagtttctatt 513  Q
    ||||||| ||||| ||| | |||| ||| ||| || |||||||| | ||||||||||| |||||||||  |   || |||||||  ||||||||||||||    
T  25265375 tatggaaggagaaaagagagaactatgataagcgactgtcatctgaaaaattgagactctgattgtgtgagtaaaatgatttagaatttgagtttctatt 25265276  T
Q  514 tatataaaatggataataaactgattt 540  Q
    |||||| || |||||||||| ||||||    
T  25265275 tatatagaa-ggataataaattgattt 25265250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 312
Target Start/End: Original strand, 30034282 - 30034432
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttact-agttaccctacccatattcaacagggatgagaaagcgaatctcat- 261  Q
    |||||||  |||||||||||  ||| || |||||||||||||| |||||||||   |||| ||| ||| || || ||| ||||||||| ||||||||||     
T  30034282 tggggacgggttttaccttccacgtccccataccctactctcacatacttactccattacactatccaaatccagcagagatgagaaatcgaatctcatc 30034381  T
Q  262 cccatccccgactggttcaggtatcctcgcctcatccccctctctgtagtg 312  Q
    |||||| ||||| ||||  |||||||  ||| ||||||| |||||| ||||    
T  30034382 cccatcaccgacgggtttgggtatccctgccccatccccatctctgcagtg 30034432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 45064937 - 45065003
Alignment:
Q  198 ctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    ||||||||||||||||||  |||| |||| |||||| |||| |||||||||||  ||||||||||||    
T  45064937 ctactctcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctcatccc 45065003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 277
Target Start/End: Complemental strand, 53910286 - 53910173
Alignment:
Q  162 gatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat 261  Q
    |||||||||  ||||||||||  ||||||| |   ||| ||| ||||| |||||  ||||||||||||||| ||| | ||||||||||| ||||||||||    
T  53910286 gatggggacgggttttacctttcccgttccca---cctgctcccatatgcttacccgttaccctacccatactcagcggggatgagaaatcgaatctcat 53910190  T
Q  262 -cccatccccgactggt 277  Q
     ||| ||||||||||||    
T  53910189 ccccgtccccgactggt 53910173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 140 - 300
Target Start/End: Complemental strand, 1724782 - 1724621
Alignment:
Q  140 cctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaaca 239  Q
    |||||||||  ||||||| | || |||||||  ||||| | ||| |||| || |||||| | ||||||||| |||   |||||||||||||||  ||||     
T  1724782 cctaggcatggcaatggggcggggtggggacgggttttgcattccccgtcccaatacccgattctcatatatttatccgttaccctacccatacccaacg 1724683  T
Q  240 gggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||||  ||| ||||| ||| |||| ||| ||||  ||||||| ||||||||||||    
T  1724682 gggatgagaaattgaacctcatccccgtccctgacgggtttgggtatccccgcctcatcccc 1724621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 19534123 - 19534188
Alignment:
Q  185 ccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| |||||| | |||||||||||||||  ||||||||||||||| |||| |||||| ||||    
T  19534123 ccgttcccatacccgattctcatatacttactcattaccctacccatatccaacggggatgcgaaa 19534188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 26564516 - 26564601
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc-ccatccccgactggttcaggtatc 286  Q
    ||||||||||||||  |||||||||||||||| ||||  ||||||||||  |||||||||| || ||||| || ||||| ||||||    
T  26564516 tctcatatacttacctgttaccctacccatatccaacgaggatgagaaattgaatctcatctccgtccccaacgggttcgggtatc 26564601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 300
Target Start/End: Original strand, 32585136 - 32585272
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    ||||||| ||||||| |||  |||| || ||| || | |||||| |||||||| |||||||||| ||||| |||| || ||||||||  ||||| |||||    
T  32585136 tggggacgagttttatctttcccgtccccatatccgattctcatgtacttacttgttaccctactcatatccaactgg-atgagaaattgaatcacatcc 32585234  T
Q  264 cat-ccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |   ||||||| ||||| ||||||| ||||||||||||    
T  32585235 ccgaccccgacaggttcgggtatccacgcctcatcccc 32585272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 540
Target Start/End: Original strand, 36919066 - 36919115
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactgattt 540  Q
    ||||||| ||||||||||||||||||||||||  | ||||||||||||||    
T  36919066 gatttagagtttgagtttctatttatataaaagtggtaataaactgattt 36919115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 10286915 - 10287015
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    |||||||  ||||||||| | |||| || |||||||| ||| ||||||||||  ||||||||| |||||  |||| |||||||||||   ||||||||||    
T  10286915 tggggacgggttttacctcccccgtccccataccctattctaatatacttacccgttaccctatccatacccaacggggatgagaaatataatctcatcc 10287014  T
Q  264 c 264  Q
    |    
T  10287015 c 10287015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 30266767 - 30266715
Alignment:
Q  198 ctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    |||||| |||||||||||  |||||||||| ||||| ||||||||||||||||    
T  30266767 ctactcccatatacttacccgttaccctactcatatccaacagggatgagaaa 30266715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 30285421 - 30285473
Alignment:
Q  198 ctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    |||||| |||||||||||  |||||||||| ||||| ||||||||||||||||    
T  30285421 ctactcccatatacttacccgttaccctactcatatccaacagggatgagaaa 30285473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 41915404 - 41915336
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||||| |||||||||  |||||||||  |||||||||| |||||||||||  ||||| ||||||    
T  41915404 ccctactctcgtatacttacctgttaccctattcatattcaacggggatgagaaattgaatcgcatccc 41915336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 540
Target Start/End: Complemental strand, 50376502 - 50376454
Alignment:
Q  492 atttagggtttgagtttctatttatataaaatggataataaactgattt 540  Q
    |||||| |||| ||||||||||||||||||||||| |||||| ||||||    
T  50376502 atttagcgttttagtttctatttatataaaatggaaaataaattgattt 50376454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 19549379 - 19549308
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||| ||||||| |||||||| | ||||||||||||||  |||| || | |||||| |||||||||||||    
T  19549379 ataccccactctcaaatacttaccatttaccctacccatacccaacgggaaagagaaatcgaatctcatccc 19549308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 21423486 - 21423645
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||| ||||||| ||   ||| || |||||| | ||||||||||||||  |||||||||| ||||  |||||||    
T  21423486 taggcatggcaatggggcggggtggggacaggttttacatttctcgtccccatacccgattctcatatacttacccgttaccctactcatacacaacagg 21423585  T
Q  242 gatgagaaagcgaatctca-tcccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||| |||||  |||| ||| |||| |||||||  ||||| |||||||  ||| |||||||    
T  21423586 gataagaaattgaatttcattcccgtccccgataggttcgggtatccctgccccatcccc 21423645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 589
Target Start/End: Complemental strand, 33516224 - 33516125
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactga-tttgtacattcgaaacaggtttttgtatgagtttgaggtgggtacttatatc 589  Q
    |||||||||||||||||| ||||||||||||| || ||||| | ||| ||| |||||| || || |||||  ||||  ||| | ||||||||||||||||    
T  33516224 gatttagggtttgagtttttatttatataaaaggggtaatacattgattttttacatttgagacgggtttgggtataggttcggggtgggtacttatatc 33516125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 522
Target Start/End: Original strand, 42907830 - 42907861
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaa 522  Q
    ||||||||||||||||||||||||||||||||    
T  42907830 gatttagggtttgagtttctatttatataaaa 42907861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 44887582 - 44887653
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||| | ||||||||||||||  ||||||||| |||||| |||  |||||||||||  ||||||||||||    
T  44887582 atacccgattctcatatacttacctgttaccctatccatatccaatggggatgagaaattgaatctcatccc 44887653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 3737422 - 3737512
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccata 232  Q
    |||||||  ||||||| | || |||||||  |||||||||||||| | || ||||| || ||||||||| ||||  |||||||||||||||    
T  3737422 taggcatggcaatggggcggggtggggacgggttttaccttctccatccccataccatattctcatatatttacccgttaccctacccata 3737512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 533
Target Start/End: Complemental strand, 9281041 - 9280999
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaa 533  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||    
T  9281041 gatttagggtttgaatttctatctatataaaagggataataaa 9280999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 43309114 - 43309200
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    |||||||  ||||||||||| || | |  |||||||| |||| |||  ||||  ||||||||||||||| |||||||||||||||||    
T  43309114 tggggacgggttttaccttccccatcctcataccctaatctcgtatctttacccgttaccctacccatactcaacagggatgagaaa 43309200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 540
Target Start/End: Complemental strand, 12075775 - 12075734
Alignment:
Q  499 gtttgagtttctatttatataaaatggataataaactgattt 540  Q
    |||| |||||||||||||||||||||| ||||||| ||||||    
T  12075775 gttttagtttctatttatataaaatgggtaataaattgattt 12075734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 55293386 - 55293451
Alignment:
Q  416 tggaacgagaagagataaaactttgagaagtgagtgtcatctaagaaattgagactatgattgtgt 481  Q
    ||||| ||||||||| | ||||| |||||||||||||| ||||| | | ||||||| |||||||||    
T  55293386 tggaaggagaagagagacaacttagagaagtgagtgtcttctaacagaatgagactttgattgtgt 55293451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 14606346 - 14606278
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||| | |||||||||  ||||||||||| |||  |||| |||||||||||  ||||||||||||    
T  14606346 ccctactcccgtatacttacctgttaccctacctatacccaacggggatgagaaattgaatctcatccc 14606278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 31416351 - 31416283
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||| |||||||||||  |||||| ||| ||||| | || |||||||||||  ||||||||||||    
T  31416351 ccctactcccatatacttacccgttaccttactcatatcctacggggatgagaaattgaatctcatccc 31416283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 37926182 - 37926246
Alignment:
Q  199 tactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    ||||||||||||||||   |||||| ||||||||| ||  |||||||||||| ||||| ||||||    
T  37926182 tactctcatatacttatctgttaccttacccatatccagtagggatgagaaatcgaatatcatcc 37926246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 522
Target Start/End: Original strand, 39086042 - 39086130
Alignment:
Q  434 aactttgagaagtgagtgtcatctaagaaattgagactatgattgtgttcgaggaacgatttagggtttgagtttctatttatataaaa 522  Q
    |||| ||| |||| |||||||||| | ||| ||||| | ||| |||||  | | || |||||||||||| |||||||||||||||||||    
T  39086042 aactatgataagtaagtgtcatctgaaaaactgagagtctgactgtgtgagtgaaatgatttagggtttaagtttctatttatataaaa 39086130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 39375026 - 39375074
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||||||||||  ||||||||||| |||| |||| |||||||||||    
T  39375026 tctcatatacttacccgttaccctaccgatatccaacggggatgagaaa 39375074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 4e-24; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 142 - 298
Target Start/End: Complemental strand, 10208899 - 10208742
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| ||||||  |||||| | ||||||||||||||  |||||||||||||||| |||| ||    
T  10208899 taggcatggcaatggggcggggtggggacgggttttaccttccccgttctcatacccgattctcatatacttacccgttaccctacccatatccaacggg 10208800  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcc 298  Q
    |||||||||  ||||||||| ||| |||||||| ||||| ||||||| |||| |||||    
T  10208799 gatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgccccatcc 10208742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 142 - 307
Target Start/End: Complemental strand, 36128577 - 36128411
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| |||| || ||| || | ||||||||||||||  |||||||||||||||  |||| ||    
T  36128577 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatatccgattctcatatacttacccgttaccctacccatacccaacggg 36128478  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatccccctctctg 307  Q
    ||||| |||  ||||||||| ||| |||||||| ||||||||||||| |||| ||||||| ||||||    
T  36128477 gatgaaaaattgaatctcatccccgtccccgacgggttcaggtatccccgccccatccccgtctctg 36128411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 30846563 - 30846723
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | |||||||||| | |||||||||| |||| || |||||| | |||||||||||||   |||||||||||||||  |||| |    
T  30846563 ctaggcatggcaatggggcgggatggggacgaattttaccttccccgtccccatacccgattctcatatacttagccgttaccctacccatacccaacgg 30846662  T
Q  241 ggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||||  ||||| ||| ||| |||||||| ||||| ||||||| |||| |||||||    
T  30846663 ggatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccgccccatcccc 30846723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 37473200 - 37473053
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| |||| ||||| |  ||||||||||| |||| ||||||||  | | ||||||||||||  |||||||||||||||  |||| |    
T  37473200 ctaggcatgtcaatggggcagggtggggtcgggttttaccttccccgtccctatacctgattttcatatacttacctgttaccctacccatacccaacgg 37473101  T
Q  241 ggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    ||||||||||  ||||||||| |||||||||||| ||||| |||||||    
T  37473100 ggatgagaaattgaatctcatccccatccccgacgggttcgggtatcc 37473053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 24414579 - 24414442
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    ||||||| |||||||||||| |||| |  |||||||| ||||||| ||||||  |||||||||||||||  |||| |||||||||||  ||||| ||| |    
T  24414579 tggggacgagttttaccttccccgtccacataccctattctcatacacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatcc 24414480  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    || |||||||| ||||| ||||||| |||| |||||||    
T  24414479 ccgtccccgacgggttcgggtatccccgccccatcccc 24414442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 13830355 - 13830514
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| |||| || |||||| | ||||||||||||||   ||||||||||||||  |||| ||    
T  13830355 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacctattaccctacccatacccaacggg 13830454  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||| ||| ||| |||||||| ||||| ||||||| |||| |||||||    
T  13830455 gatgagaaattgaatcacatccccgtccccgacgggttcgggtatccccgccccatcccc 13830514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 434 - 540
Target Start/End: Original strand, 13531831 - 13531936
Alignment:
Q  434 aactttgagaagtgagtgtcatctaagaaattgagactatgattgtgttcgaggaacgatttagggtttgagtttctatttatataaaatggataataaa 533  Q
    |||| ||||||||||||||||||| ||| | | ||  | |||||||||  | | || |||||||||||||||||||||||||||||||||||||||||||    
T  13531831 aactctgagaagtgagtgtcatctgagagactaagttt-tgattgtgtgagtgaaatgatttagggtttgagtttctatttatataaaatggataataaa 13531929  T
Q  534 ctgattt 540  Q
     ||||||    
T  13531930 ttgattt 13531936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 151 - 264
Target Start/End: Original strand, 9632026 - 9632139
Alignment:
Q  151 caatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| | || |||||||  ||||||||||| ||||||| |||||| | ||| ||||||||||  |||||||||||||||  |||| |||||||||||    
T  9632026 caatggggcggggtggggacgggttttaccttccccgttcccatacccgattcttatatacttacccgttaccctacccatacccaacggggatgagaaa 9632125  T
Q  251 gcgaatctcatccc 264  Q
      ||||||||||||    
T  9632126 ttgaatctcatccc 9632139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 7315120 - 7314973
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | || |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||||| ||||||| || | |    
T  7315120 ctaggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctgcccatatccagcgg 7315021  T
Q  241 ggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    ||||||||||  ||||| ||| ||| |||||||| ||||| |||||||    
T  7315020 ggatgagaaattgaatcacatccccgtccccgacgggttcgggtatcc 7314973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 491 - 589
Target Start/End: Original strand, 25210315 - 25210414
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactga-tttgtacattcgaaacaggtttttgtatgagtttgaggtgggtacttatatc 589  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| ||| ||| ||||||||  |  |||||| ||||| ||||| ||||||||| ||||||    
T  25210315 gatttagggtttgagtttctatttatataaaatgggtaacaaattgattttctacattcgggaggggttttggtatgggtttggggtgggtacatatatc 25210414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 491 - 593
Target Start/End: Original strand, 30696862 - 30696965
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactga-tttgtacattcgaaacaggtttttgtatgagtttgaggtgggtacttatatc 589  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||| ||| |||||| |  | ||||||  ||||||||| | ||||||||| ||||||    
T  30696862 gatttagggtttgaatttctatttatataaaatgggtaataaattgattttttacatttgggataggtttgggtatgagttcggggtgggtacatatatc 30696961  T
Q  590 tctg 593  Q
    ||||    
T  30696962 tctg 30696965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 11009206 - 11009097
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | || |||||||  |||||| |||| |||| || |||||| | ||||||||||||||  |||||||||||||||  ||||||    
T  11009206 ctaggcatggcaatggggcggggtggggacgggttttatcttccccgtccccatacccgattctcatatacttacacgttaccctacccatacccaacag 11009107  T
Q  241 ggatgagaaa 250  Q
    ||||||||||    
T  11009106 ggatgagaaa 11009097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 173 - 300
Target Start/End: Original strand, 37999135 - 37999263
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccg 271  Q
    ||||||||||| |||| || |||| | | ||||||||| ||||  |||||||||||| ||| |||| |||||||||||  ||||||||| ||| || |||    
T  37999135 gttttaccttccccgtccccatactcgattctcatataattacccgttaccctacccgtatccaacggggatgagaaattgaatctcatccccgtctccg 37999234  T
Q  272 actggttcaggtatcctcgcctcatcccc 300  Q
    || ||||| ||||||| |||| |||||||    
T  37999235 acgggttcgggtatccccgccccatcccc 37999263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 10920333 - 10920404
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||| ||||||||||||||  |||||||||||||||| |||| |||||||||||  ||||| ||||||    
T  10920333 ataccctattctcatatacttacctgttaccctacccatatccaacggggatgagaaattgaatcccatccc 10920404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 22900428 - 22900528
Alignment:
Q  164 tggggacaagttttaccttctccgttcct-ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc 262  Q
    ||||||| |||||||||||| ||  |||| |||||||| ||||||||||||||  |||||||||||||||  |||| ||||||||||| |||| | ||||    
T  22900428 tggggacgagttttaccttc-cctatcctcataccctattctcatatacttacccgttaccctacccatacccaacggggatgagaaatcgaaccccatc 22900526  T
Q  263 cc 264  Q
    ||    
T  22900527 cc 22900528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 193 - 301
Target Start/End: Complemental strand, 29657213 - 29657104
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgc 291  Q
    |||||||||||||||||||||| | |||||||| ||||||   ||| |||||||||||  ||||||||| |||  ||||||| ||||| ||||| | |||    
T  29657213 ataccctactctcatatacttatttgttaccctgcccatacctaacggggatgagaaattgaatctcatccccgcccccgacgggttcgggtatacccgc 29657114  T
Q  292 ctcatccccc 301  Q
    | ||||||||    
T  29657113 cccatccccc 29657104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 13705785 - 13705709
Alignment:
Q  188 ttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||| |||||| | |||||||||||||   |||||||||||||||| |||| |||||||||||  ||||||||||||    
T  13705785 ttcccatacccgattctcatatacttatccgttaccctacccatatccaacggggatgagaaattgaatctcatccc 13705709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 15546313 - 15546421
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| || | || |||||||| ||||||||||||||  ||||||||||| |||| |||  ||    
T  15546313 taggcatggcaatgggtcggggtggggacgggttttaccttccccatccccataccctattctcatatacttacccgttaccctacctatatccaatggg 15546412  T
Q  242 gatgagaaa 250  Q
    |||||||||    
T  15546413 gatgagaaa 15546421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 588
Target Start/End: Complemental strand, 17845543 - 17845444
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactga--tttgtacattcgaaacaggtttttgtatgagtttgaggtgggtacttatat 588  Q
    |||||||| || |||||||||||||||||||| |||||||||| |||  ||| ||||||||| || |||||  ||||| |||   |||||||||||||||    
T  17845543 gatttaggtttggagtttctatttatataaaaaggataataaattgatttttttacattcgagacgggtttgggtatgggttaagggtgggtacttatat 17845444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 17845879 - 17845779
Alignment:
Q  174 ttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc-catccccga 272  Q
    ||||| |||| ||||||  ||||| || ||||| ||||||||  |||||||||| |||| |||| ||||||||||||  ||||||||||| |||||||||    
T  17845879 ttttaacttccccgttctcataccatagtctcaaatacttacctgttaccctacgcatactcaatagggatgagaaattgaatctcatcctcatccccga 17845780  T
Q  273 c 273  Q
    |    
T  17845779 c 17845779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 31942624 - 31942516
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    ||||||| |||||||| | || |||||||  ||||||| ||| |||| || |||||| | | ||||||||||||  |||||||||||||||  |||| ||    
T  31942624 taggcatgacaatggggcggggtggggacgggttttacattccccgtccccatacccgattatcatatacttacccgttaccctacccatacccaacggg 31942525  T
Q  242 gatgagaaa 250  Q
    |||||||||    
T  31942524 gatgagaaa 31942516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 35248878 - 35248790
Alignment:
Q  174 ttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc 262  Q
    |||||||||| |||| || ||||| ||||| || ||||||||   ||||||||||||||| |||| ||||| ||||| |||||||||||    
T  35248878 ttttaccttccccgtccccataccttactcccaaatacttacccattaccctacccatatccaacggggataagaaatcgaatctcatc 35248790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 45115283 - 45115359
Alignment:
Q  225 tacccatattcaacagggatgagaaagcgaatctcatccc-atccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||| |||||| |||| ||||||  |||||||||||| ||||||||| ||||| ||||||| ||||||||||||    
T  45115283 tacccatgttcaacggggacgagaaattgaatctcatccccatccccgacgggttcgggtatccccgcctcatcccc 45115359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 164 - 298
Target Start/End: Complemental strand, 6028336 - 6028201
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  ||||||| ||| |||| || |||||| | ||| |||| |||||  ||||||||||| |||| ||||||||||||||||  ||| | ||| |    
T  6028336 tggggacgggttttacattccccgtccccatacccgattcttatatccttacctgttaccctaccaatatccaacagggatgagaaattgaaccccatcc 6028237  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatcc 298  Q
    || |||||||| ||||| ||||||| |||| |||||    
T  6028236 ccgtccccgacgggttcgggtatccccgccccatcc 6028201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 264
Target Start/End: Original strand, 26755352 - 26755475
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | | ||| |||| |||||| || || |||| || || |||||||| |||||||||||   ||||||||||||||  |||| |    
T  26755352 ctaggcatggcaatggggcggaatgtggacgagttttgccatccccgtccccatcccctactcccatatacttacccattaccctacccatacccaacgg 26755451  T
Q  241 ggatgagaaagcgaatctcatccc 264  Q
    ||||||||||  ||||||||||||    
T  26755452 ggatgagaaattgaatctcatccc 26755475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 8916345 - 8916259
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    ||||||||||||||  |||||||||||||||  ||||  ||||||||||  ||||||||| ||| |||||||| ||||| |||||||    
T  8916345 tctcatatacttacccgttaccctacccatacccaacgaggatgagaaattgaatctcatccccgtccccgacgggttcgggtatcc 8916259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 13954336 - 13954425
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc 262  Q
    |||||||||||  ||| || ||| | |||||||||||||||||| |||| ||||||||||  || | ||||| ||||| |||||||||||    
T  13954336 gttttaccttcctcgtccccatatcatactctcatatacttactcgttatcctacccatacccagcggggataagaaatcgaatctcatc 13954425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 262
Target Start/End: Original strand, 14095543 - 14095632
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc 262  Q
    |||||||||||  ||| || ||| | |||||||||||||||||| |||| ||||||||||  || | ||||| ||||| |||||||||||    
T  14095543 gttttaccttcctcgtccccatatcatactctcatatacttactcgttatcctacccatacccagcggggataagaaatcgaatctcatc 14095632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 18106526 - 18106441
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaa 249  Q
    |||||||  |||||| |||| |||| || |||||| | |||| |||||||||  |||||||||||||||| |||| ||||||||||    
T  18106526 tggggacgggttttatcttccccgtccccatacccgattctcgtatacttacctgttaccctacccatatccaacggggatgagaa 18106441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 492 - 533
Target Start/End: Complemental strand, 34544461 - 34544420
Alignment:
Q  492 atttagggtttgagtttctatttatataaaatggataataaa 533  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  34544461 atttagggtttgagtttttatttatataaaatgggtaataaa 34544420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 18485312 - 18485380
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    ||||||||  ||||||||||  |||||||||||||||| |||| |||||||||||  ||||| ||||||    
T  18485312 ccctactcctatatacttacctgttaccctacccatatccaacggggatgagaaattgaatcccatccc 18485380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 35336296 - 35336358
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    ||||||||||||||  |||||||||||||||| |||  | |||||||||  ||||||||||||    
T  35336296 tctcatatacttacatgttaccctacccatatccaatggagatgagaaattgaatctcatccc 35336358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 38342960 - 38342906
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    |||||||| |||||| |||   ||||||||||||||||||||| |||||||||||    
T  38342960 ccctactcacatatatttatccgttaccctacccatattcaacggggatgagaaa 38342906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 264
Target Start/End: Complemental strand, 16227142 - 16227037
Alignment:
Q  159 caggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatct 258  Q
    |||| |||||||  ||||||| ||| |||| || |||||| | ||||||||||||||  |||||||||| ||||  |||| ||||||| |||  ||| ||    
T  16227142 cagggtggggacgggttttacattccccgtccccatacccgattctcatatacttacatgttaccctactcatacccaacggggatgaaaaattgaacct 16227043  T
Q  259 catccc 264  Q
    ||||||    
T  16227042 catccc 16227037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 579
Target Start/End: Complemental strand, 29656886 - 29656797
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactga-tttgtacattcgaaacaggtttttgtatgagtttgaggtggg 579  Q
    |||||||||||   |||| ||||||||||||| |||||||||| ||| ||| |||||| || |||| ||| |||||||||| | ||||||    
T  29656886 gatttagggttatggtttttatttatataaaagggataataaattgattttatacatttgagacagatttgtgtatgagttcggggtggg 29656797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 37319563 - 37319636
Alignment:
Q  142 taggcattacaatgggacaggatgggg-acaagttttaccttctccgttcctataccctactctcatatactta 214  Q
    ||||||| ||||||||||||| ||||| || |||||||| ||| |||| || |||||| | |||||||||||||    
T  37319563 taggcatgacaatgggacagggtgggggacgagttttacattccccgtccccatacccgattctcatatactta 37319636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 42576250 - 42576303
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaa 249  Q
    |||||||  |||||||||||  |||||||||||||||| |||| ||||||||||    
T  42576250 ccctacttccatatacttacccgttaccctacccatatccaacggggatgagaa 42576303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 3546814 - 3546882
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    ||||||||||||||||||||   |||||||| |||||   ||| |||||||||||  ||||||||||||    
T  3546814 ccctactctcatatacttaccccttaccctatccatagctaacggggatgagaaattgaatctcatccc 3546882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 529
Target Start/End: Original strand, 33174333 - 33174369
Alignment:
Q  493 tttagggtttgagtttctatttatataaaatggataa 529  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  33174333 tttagggtttgggtttctatttatataaaagggataa 33174369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 139 - 298
Target Start/End: Original strand, 35074090 - 35074249
Alignment:
Q  139 gcctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaac 238  Q
    ||||||||||  ||||||| | || |||||||  ||||||||||| ||||||| |||||| | ||||||||||||||  |||||||||||||||  ||||    
T  35074090 gcctaggcatggcaatggggcggggtggggacgggttttaccttccccgttcc-atacccgattctcatatacttacccgttaccctacccatacccaac 35074188  T
Q  239 agggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcc 298  Q
     ||||||||||| |||||| ||| ||| |||||||| ||||| ||||||| |||| |||||    
T  35074189 ggggatgagaaatcgaatcccatccccgtccccgacgggttcgggtatccccgccccatcc 35074249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 17851489 - 17851611
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||||||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||  |||| ||    
T  17851489 taggcatggcaatggggcggggtggggacaagttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacggg 17851588  T
Q  242 gatgagaaagcgaatctcatccc 264  Q
    |||||||||  ||||||||||||    
T  17851589 gatgagaaattgaatctcatccc 17851611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 38152524 - 38152683
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    ||||||| |||||||| | || |||||||  ||||||||||| ||||||| |||| | | ||||||||||||||  ||||||||||||||| ||||| ||    
T  38152524 taggcatgacaatggggcggggtggggacgggttttaccttccccgttcccatactcgattctcatatacttacccgttaccctacccatactcaacggg 38152623  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||| ||| ||| |||||||  ||||  ||||||| |||| |||||||    
T  38152624 gatgagaaattgaatcccatccccgtccccgatgggtttgggtatccccgccccatcccc 38152683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 142 - 287
Target Start/End: Original strand, 43507057 - 43507202
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  |||||||||  | |||||||  ||||||||||| ||||||| |||||| | ||||||||||||||  ||||||||||||||| ||||| ||    
T  43507057 taggcatggcaatgggacgaggtggggacgggttttaccttccccgttcccatacccgattctcatatacttacctgttaccctacccatactcaac-gg 43507155  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    ||||| |||  ||||||||| ||| |||||||| ||||| |||||||    
T  43507156 gatgacaaattgaatctcatccccgtccccgacaggttcgggtatcc 43507202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 139 - 287
Target Start/End: Original strand, 10072109 - 10072258
Alignment:
Q  139 gcctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaac 238  Q
    ||||||||||  ||||||| | || |||| ||  ||||||||||| || | || |||||| | ||||||||||||||  |||||||||||||||  ||||    
T  10072109 gcctaggcatggcaatggggcggggtgggaacgggttttaccttccccatccccatacccgattctcatatacttacctgttaccctacccatacccaac 10072208  T
Q  239 agggatgagaaagcgaatctcatcc-catccccgactggttcaggtatcc 287  Q
    ||||||||||||  ||||||||||| | |||||||| ||||| |||||||    
T  10072209 agggatgagaaattgaatctcatcctcgtccccgacgggttcgggtatcc 10072258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 18125675 - 18125538
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  ||||||||||| | ||||| |||||| | ||||||||||||||| |||| |||| ||||||  ||| |||||||||||  ||||||||| |    
T  18125675 tggggacgggttttaccttccctgttcccatacccgattctcatatacttactcgttatcctatccatatctaacggggatgagaaattgaatctcatcc 18125576  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    || |||||||| ||||| ||||||| |||| |||||||    
T  18125575 ccgtccccgacgggttcgggtatccccgccccatcccc 18125538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 45886203 - 45886078
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccg 271  Q
    ||||||||||| ||||  | |||||| | ||||||||||||||  |||||||||||||||| |||| |||||||||||  ||||||||| ||| ||||||    
T  45886203 gttttaccttccccgtctccatacccaattctcatatacttacctgttaccctacccatatccaacggggatgagaaattgaatctcatccccgtccccg 45886104  T
Q  272 actggttcaggtatcctcgcctcatc 297  Q
    || ||||| ||||||| |||| ||||    
T  45886103 acgggttcgggtatccccgccccatc 45886078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 173 - 300
Target Start/End: Original strand, 3156680 - 3156808
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccg 271  Q
    ||||||||||| ||||||| |||||| |||||||| |||||||  ||||  ||||||||||||| | ||||| ||||| ||| |||||| |||||| |||    
T  3156680 gttttaccttccccgttcccatacccaactctcatgtacttacctgttattctacccatattcagcggggataagaaatcgattctcatccccatctccg 3156779  T
Q  272 actggttcaggtatcctcgcctcatcccc 300  Q
    || ||||  ||||||| ||||||||||||    
T  3156780 acgggtttgggtatccccgcctcatcccc 3156808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 4101120 - 4101240
Alignment:
Q  165 ggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||| |||||||||||| |||| || ||||||||||||||||| |||||   |||| |||| ||||  |||| ||||||| ||| ||||||||||||     
T  4101120 ggggacgagttttaccttccccgtccccataccctactctcatatccttacccattactctactcatacccaacggggatgaaaaatcgaatctcatcct 4101219  T
Q  265 atccccgactggttcaggtat 285  Q
    ||||||||| ||||| |||||    
T  4101220 atccccgacgggttcgggtat 4101240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 416 - 540
Target Start/End: Complemental strand, 6557952 - 6557828
Alignment:
Q  416 tggaacgagaagagataaaactttgagaagtgagtgtcatctaagaaattgagactatgattgtgttcgaggaacgatttagggtttgagtttctattta 515  Q
    ||||| ||||||||| | ||||| |||||||||||||||||| | | | ||||||| |||||||||  | | || ||||||| ||||||| ||||||||     
T  6557952 tggaaggagaagagagagaacttagagaagtgagtgtcatctgaaagactgagactttgattgtgtgagtgaaatgatttagagtttgagattctatttc 6557853  T
Q  516 tataaaatggataataaactgattt 540  Q
    ||| ||| |||||||||||||||||    
T  6557852 tatgaaaaggataataaactgattt 6557828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 264
Target Start/End: Complemental strand, 10996317 - 10996194
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | || |||||||  ||||||||||| || | || |||||||| ||||||||||||||  ||||| ||||||||||||||| |    
T  10996317 ctaggcatggcaatggggcggggtggggacgggttttaccttccccatccccataccctattctcatatacttacctgttactctacccatattcaacgg 10996218  T
Q  241 ggatgagaaagcgaatctcatccc 264  Q
    |||||||||| ||||  |||||||    
T  10996217 ggatgagaaatcgaacatcatccc 10996194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 168 - 298
Target Start/End: Complemental strand, 23534107 - 23533976
Alignment:
Q  168 gacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccat 266  Q
    ||||||||||||||| ||| | |  ||||||||||  ||||| |||||| |||||||||||||||| || | ||||||||||| |||||||||| ||| |    
T  23534107 gacaagttttaccttttccatcctcataccctacttccatattcttactcgttaccctacccatatccagcggggatgagaaatcgaatctcatccccgt 23534008  T
Q  267 ccccgactggttcaggtatcctcgcctcatcc 298  Q
    | ||||| ||||| |||||||  |||||||||    
T  23534007 ctccgacgggttcgggtatccctgcctcatcc 23533976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 25905252 - 25905411
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| ||||| | |||||  | ||||||||||||||| |||||||||||||||  ||||| |    
T  25905252 taggcatggcaatggggcggggtggggacgggttttaccttccccgtttccatacctgattctcatatacttactcgttaccctacccatacccaacaag 25905351  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||||||| ||| |||||||| | ||| ||||||| | || |||||||    
T  25905352 gatgagaaattgaatctcatccccgtccccgacggattcgggtatcccctccccatcccc 25905411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 44986358 - 44986208
Alignment:
Q  150 acaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaa 249  Q
    |||||||| | |||||||||| |||||||||||| |||| || |||||| | ||||||||||||||  ||||||||||| |||| |||| | ||||||||    
T  44986358 acaatggggcgggatggggacgagttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacctatatccaac-gagatgagaa 44986260  T
Q  250 agcgaatctcatc-ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |  ||| |||||| || |||||||| ||||| ||||||| | || |||||||    
T  44986259 attgaagctcatctccgtccccgacgggttcgggtatccccaccccatcccc 44986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 141 - 325
Target Start/End: Original strand, 29292250 - 29292435
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||||| || |||||||  ||||||||||| || |||| |||| ||||| |||||| ||||   |||||||||||||||  |||| |    
T  29292250 ctaggcatggcaatgggacggggtggggacgggttttaccttccccattcccatactctactttcatatgcttatccgttaccctacccatacccaacgg 29292349  T
Q  241 ggatgagaaagcgaatctcatcc-catccccgactggttcaggtatcctcgcctcatccccctctctgtagtggacaatatttttt 325  Q
     |||| |||| |||||||||||| | ||||| || || || ||||||| || | ||||||| || |||||||||| ||| ||||||    
T  29292350 agatgtgaaatcgaatctcatcctcgtccccaacgggatcgggtatccccgacccatccccatccctgtagtggataatttttttt 29292435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 30650285 - 30650410
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccg 271  Q
    ||||||||||| || |  | |||||| | ||||||||||||||  |||||||||||||||| |||| |||||||||||  ||||||||| ||| ||||||    
T  30650285 gttttaccttccccatctccatacccgattctcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatctcatccccgtccccg 30650384  T
Q  272 actggttcaggtatcctcgcctcatc 297  Q
    || ||||| ||||||| |||| ||||    
T  30650385 acgggttcgggtatccccgccccatc 30650410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 151 - 264
Target Start/End: Original strand, 33840707 - 33840820
Alignment:
Q  151 caatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| | || |||||||  |||||||||||||| | || || || || ||||||||||||||  ||||||||||||||| ||||| |||||||||||    
T  33840707 caatggggcggggtggggacgggttttaccttctccatccccatgccatattctcatatacttacctgttaccctacccatactcaacggggatgagaaa 33840806  T
Q  251 gcgaatctcatccc 264  Q
     |||| ||||||||    
T  33840807 tcgaacctcatccc 33840820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 299
Target Start/End: Original strand, 7779653 - 7779791
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-- 261  Q
    |||||||  ||||||||||| |||| || |||||| | |||| ||||||||   |||||||||||||||| |||| |||||||||||  |||||||||      
T  7779653 tggggacgggttttaccttccccgtccccatacccgattctcgtatacttatctgttaccctacccatatccaacggggatgagaaattgaatctcatcc 7779752  T
Q  262 -cccatccccgactggttcaggtatcctcgcctcatccc 299  Q
     ||| |||||||| ||||| ||||||| |||| ||||||    
T  7779753 ccccgtccccgacgggttcgggtatccccgccacatccc 7779791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 8265431 - 8265531
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    |||||||  |||||| ||||| | ||||||||||||||||| ||||||||||  |||||||||||||||  || |  |||||||||| ||||||||||||    
T  8265431 tggggacgggttttatcttcttctttcctataccctactcttatatacttacctgttaccctacccatacacagcgaggatgagaaatcgaatctcatcc 8265530  T
Q  264 c 264  Q
    |    
T  8265531 c 8265531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 287
Target Start/End: Complemental strand, 38140261 - 38140113
Alignment:
Q  140 cctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaaca 239  Q
    |||||||||  ||||||| | || ||||||| ||||||||||||  ||| || ||| ||   ||||||||||||||  |||||||||||||||  ||||     
T  38140261 cctaggcatggcaatggggcggggtggggacgagttttaccttcctcgtacccatatccggttctcatatacttacccgttaccctacccataaccaacg 38140162  T
Q  240 gggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    |||||||||||  ||||||||| ||| |||||||| ||||| |||||||    
T  38140161 gggatgagaaattgaatctcatccccgtccccgacgggttcgggtatcc 38140113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 173 - 287
Target Start/End: Original strand, 24752688 - 24752803
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc-ccatccccg 271  Q
    |||||||||||||| |||  ||| || | |||||||||||||   |||| |||||||||||||||| | |||||||||  ||||| |||| |||||||||    
T  24752688 gttttaccttctccattctcatatccgattctcatatacttatccgttatcctacccatattcaacggagatgagaaattgaatcacatctccatccccg 24752787  T
Q  272 actggttcaggtatcc 287  Q
    || |||||||||||||    
T  24752788 acgggttcaggtatcc 24752803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 41103267 - 41103386
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| ||||  ||||||| |||||||||||||||| || |||||| | |||||||| |||||  ||||||||||| |||  |||| ||    
T  41103267 taggcatagcaatggggcagggcggggacaggttttaccttctccgtccccatacccgattctcatatgcttacccgttaccctacctatacccaacggg 41103366  T
Q  242 gatgagaaagcgaatctcat 261  Q
    |||||||||  |||||||||    
T  41103367 gatgagaaattgaatctcat 41103386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 193 - 298
Target Start/End: Original strand, 17884907 - 17885013
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgc 291  Q
    |||||| | ||||||||| ||||  ||||||||||||||||||||| |||||||||||  ||||||||| ||| |||||||| ||||  ||||||| | |    
T  17884907 atacccgattctcatatatttacccgttaccctacccatattcaacggggatgagaaattgaatctcatccccgtccccgacgggtttgggtatccccac 17885006  T
Q  292 ctcatcc 298  Q
    |||||||    
T  17885007 ctcatcc 17885013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 5432474 - 5432365
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccg 271  Q
    ||||||||||| |||||| |||||| | ||| || ||||| |||  ||||||||||| ||| |||| ||||||||||| |||||||||| |||||||||     
T  5432474 gttttaccttccccgttcatataccttgctcccaaatactaactcattaccctacccttatccaacggggatgagaaatcgaatctcatccccatcccca 5432375  T
Q  272 actggttcag 281  Q
    || |||||||    
T  5432374 acgggttcag 5432365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 300
Target Start/End: Original strand, 21702325 - 21702462
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  ||||||||||| || | || |||||| | ||||||||||||||  | ||||||||||||| ||||| |||||||||||  |||||  || |    
T  21702325 tggggacgggttttaccttccccatccccatacccgattctcatatacttacccgctaccctacccatactcaacggggatgagaaattgaatcctatcc 21702424  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    || |||||||| ||||| ||||||| |||| |||||||    
T  21702425 ccgtccccgacgggttcgggtatccccgccccatcccc 21702462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 5567610 - 5567502
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || ||||||  |||||||||| | |||| || |||||||| ||||||||||||||  |||||||||| ||||| |||| ||    
T  5567610 taggcatggcaatggggcggggtggggatgagttttacctcccccgtccccataccctattctcatatacttacctgttaccctactcatatccaacggg 5567511  T
Q  242 gatgagaaa 250  Q
    |||||||||    
T  5567510 gatgagaaa 5567502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 27062699 - 27062631
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    ||||||||||||||||||||| |||| ||||||||||| |||| ||||||| |||  ||||||||||||    
T  27062699 ccctactctcatatacttactcgttatcctacccatatccaacggggatgacaaatagaatctcatccc 27062631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 46127581 - 46127473
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgc 291  Q
    |||||| | ||||||||||||||  ||||||||| ||| ||||||| |||||||||||  ||| ||||| |||||||||||  ||||||||||| | |||    
T  46127581 atacccaattctcatatacttacctgttaccctatccacattcaacggggatgagaaattgaacctcatccccatccccgatgggttcaggtattcccgc 46127482  T
Q  292 ctcatcccc 300  Q
    | |||||||    
T  46127481 cccatcccc 46127473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 300
Target Start/End: Original strand, 43217938 - 43218043
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc-ccatccccgactggttcaggtatcctcgcctc 294  Q
    ||||||| ||||||||||||| ||||||||||||||||  ||| | |||||||||  |||||||||| || ||||| |  ||||| ||||| | ||||||    
T  43217938 ccctactttcatatacttacttgttaccctacccatatctaacggagatgagaaattgaatctcatctccgtccccaatgggttcgggtattcccgcctc 43218037  T
Q  295 atcccc 300  Q
    ||||||    
T  43218038 atcccc 43218043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 300
Target Start/End: Complemental strand, 44794433 - 44794336
Alignment:
Q  204 tcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||| ||||  ||||||||||||||||  ||||||||||||||| |||||||||| ||| || ||||  ||||||||| ||| |||| |||||||    
T  44794433 tcatatatttacctgttaccctacccatatctaacagggatgagaaatcgaatctcatccccgtctccgaagggttcaggtgtccccgccccatcccc 44794336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 299
Target Start/End: Complemental strand, 3228001 - 3227858
Alignment:
Q  151 caatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| | || |||||||  |||||||| || |||| || ||| || | |||||| ||||||   |||||||||||||||| |||| |||||||||||    
T  3228001 caatggggcggggtggggacgggttttaccctccccgtccccatatccgattctcatctacttatccgttaccctacccatatccaacggggatgagaaa 3227902  T
Q  251 gcgaatctcatcccatccccgactggttcaggtatcctcgcctcatccc 299  Q
      ||||||||     |||||||| ||||| ||||||| |||||||||||    
T  3227901 ttgaatctca-----tccccgacgggttcgggtatccccgcctcatccc 3227858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 3773648 - 3773748
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    |||||||  ||||||||||  |||| || ||| ||||||| |||||||||||  |||||| ||||||||| ||   ||||||||||| ||||||||||||    
T  3773648 tggggacgggttttacctttcccgtccccatatcctactcgcatatacttacctgttaccttacccatatccagtggggatgagaaatcgaatctcatcc 3773747  T
Q  264 c 264  Q
    |    
T  3773748 c 3773748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 30839571 - 30839503
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||| |||||||||||| ||||||||| | ||| ||||| |||||||||||  ||||||||||||    
T  30839571 ccctactcccatatacttacttgttaccctaacaatactcaacggggatgagaaattgaatctcatccc 30839503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 31425671 - 31425763
Alignment:
Q  209 tacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||| ||||||||||||||||  |||| |||||||||||  ||||||||| ||||||||| |  ||||||||||| | | ||||||||||    
T  31425671 tacttaccagttaccctacccatacacaacggggatgagaaattgaatctcatccccatccccaataggttcaggtattccctcctcatcccc 31425763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 300
Target Start/End: Complemental strand, 41741887 - 41741759
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc-ccatccccg 271  Q
    |||||| |||| | ||||| ||| || | |||| |||| ||||  |||| ||||||||||| ||||||||||||||||  ||||||||||  | ||||||    
T  41741887 gttttatcttccctgttcccatatccgattctcgtatatttacccgttatcctacccatatccaacagggatgagaaattgaatctcatcatcgtccccg 41741788  T
Q  272 actggttcaggtatcctcgcctcatcccc 300  Q
    || | ||| ||||||| ||||||||||||    
T  41741787 acggattcgggtatccccgcctcatcccc 41741759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 2632436 - 2632279
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| |||| |||||||  ||||||| |||||||| || |||||  | ||||||||||||||  ||||||||| |||||  |||| ||    
T  2632436 taggcatggcaatggggcagggtggggacgggttttacattctccgtccc-atacctgattctcatatacttacccgttacccta-ccatacccaacggg 2632339  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||| ||||| ||| || ||||| ||||| ||||||| |||| |||||||    
T  2632338 gatgagaaattgaacctcatccccgtctccgacaggttcgggtatccccgccccatcccc 2632279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 299
Target Start/End: Original strand, 23328294 - 23328392
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatccc 299  Q
    ||||||||||||||| |||||||||| ||||| |||   ||||||||||   |||||||| ||| || ||||| ||||| ||||||| |||||||||||    
T  23328294 tctcatatacttacttgttaccctacacatatccaatgtggatgagaaattaaatctcatccccgtctccgacgggttcgggtatccccgcctcatccc 23328392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 27062804 - 27062858
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||||||||||||||||| | |||||||||||||  |||| |||||||||||    
T  27062804 ccctactctcatatacttacttgctaccctacccatacccaacggggatgagaaa 27062858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 300
Target Start/End: Original strand, 16865855 - 16865952
Alignment:
Q  204 tcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||||||  |||||||||||||||  |||| |||||||||||  ||||| ||| ||| |||||||| ||||| ||||||| | || |||||||    
T  16865855 tcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccaccccatcccc 16865952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 18683630 - 18683698
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||| |||||||||||  |||| ||||||||||| ||| ||| ||||||||  ||||||||||||    
T  18683630 ccctactcccatatacttacctgttatcctacccatatccaaaaggaatgagaaattgaatctcatccc 18683698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 25783310 - 25783262
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||||||||||  ||||||||||||||||||||  |||||||||||    
T  25783310 tctcatatacttacatgttaccctacccatattcaatggggatgagaaa 25783262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 300
Target Start/End: Complemental strand, 25980361 - 25980234
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc-ccatccccg 271  Q
    ||||||||||| |||| || | |||| | ||||||||||||||  |||||||||||||||  |||| ||||| |||||  |||||||||| || ||| |     
T  25980361 gttttaccttc-ccgtccccaaacccgattctcatatacttacccgttaccctacccatacccaacggggataagaaattgaatctcatctccgtcctca 25980263  T
Q  272 actggttcaggtatcctcgcctcatcccc 300  Q
    || ||||| ||||||| |||| |||||||    
T  25980262 acgggttcgggtatccccgccccatcccc 25980234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 264
Target Start/End: Complemental strand, 42908522 - 42908398
Alignment:
Q  140 cctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaaca 239  Q
    ||||||||| |||||||| | || |||||||  ||||| ||||| || | || || |||||||  |||||||||||  |||||||||||||||  |||      
T  42908522 cctaggcatgacaatggggcggggtggggacgggttttgccttccccatccccatcccctacttccatatacttacccgttaccctacccatacccaaag 42908423  T
Q  240 gggatgagaaagcgaatctcatccc 264  Q
    |||||||||||  ||||| ||||||    
T  42908422 gggatgagaaattgaatcccatccc 42908398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 17885146 - 17885229
Alignment:
Q  218 gttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||||||||  |||| |||||||||||  ||||||||| ||| |||||||| ||||  ||||||| | ||||||||||    
T  17885146 gttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccgacgggtttgggtatccccacctcatcccc 17885229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 522
Target Start/End: Original strand, 31345420 - 31345499
Alignment:
Q  443 aagtgagtgtcatctaagaaattgagactatgattgtgttcgaggaacgatttagggtttgagtttctatttatataaaa 522  Q
    |||||||||||||||||   | ||||||| |||||||||  | | || ||| ||| ||||||||||||||||||||||||    
T  31345420 aagtgagtgtcatctaaatgactgagactttgattgtgtgagtgaaatgatatagagtttgagtttctatttatataaaa 31345499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 37196397 - 37196311
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc-ccatccccgactggttcaggtatcc 287  Q
    |||| |||||||||  |||||||||||||||  |||| |||||||||||  |||||||||| || ||| |||| ||||| |||||||    
T  37196397 tctcgtatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatctccgtcctcgacgggttcgggtatcc 37196311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 300
Target Start/End: Original strand, 39316649 - 39316776
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctca--tcccatcccc 270  Q
    ||||||||||| || |||| |||||| | ||||||||| ||||  |||||||||||||||  |||| |||||||||||  ||||| ||  || | |||||    
T  39316649 gttttaccttccccattcccatacccgattctcatatatttacccgttaccctacccatacccaac-gggatgagaaattgaatc-catttctcgtcccc 39316746  T
Q  271 gactggttcaggtatcctcgcctcatcccc 300  Q
    ||| ||||| ||||||| |||| |||||||    
T  39316747 gacgggttcgggtatccccgccccatcccc 39316776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 5376753 - 5376818
Alignment:
Q  185 ccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| |||||| | | ||||||||||||  |||||||||  |||||||||| |||||||||||    
T  5376753 ccgttcccatacccgattatcatatacttacccgttaccctattcatattcaacggggatgagaaa 5376818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 328
Target Start/End: Complemental strand, 6558182 - 6558062
Alignment:
Q  208 atacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc-catccccgactggttcaggtatcctcgcctcatccccctctct 306  Q
    ||||||||  |||||| ||| |||||||||  ||||||||||| |||||||||||| | | || |||| |||| ||||||| | ||||||| || ||||     
T  6558182 atacttacatgttaccttactcatattcaatggggatgagaaatcgaatctcatcctcgttcctgactagttcgggtatcc-cacctcatcaccatctcc 6558084  T
Q  307 gtagtggacaatattttttaat 328  Q
    |||||||| ||| || ||||||    
T  6558083 gtagtggataattttgtttaat 6558062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 540
Target Start/End: Complemental strand, 11472863 - 11472814
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactgattt 540  Q
    ||||||||||||  |||||||||||||||||| | |||||||| ||||||    
T  11472863 gatttagggttttggtttctatttatataaaaggtataataaattgattt 11472814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 18826308 - 18826231
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| |||| ||| || |||||| | ||||||||||||||  |||||||||||||||   ||| |||||||||||    
T  18826308 gttttacattcttcgtccccatacccgattctcatatacttacccgttaccctacccatacctaacggggatgagaaa 18826231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 300
Target Start/End: Original strand, 37578949 - 37579046
Alignment:
Q  204 tcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||||||  |||||||||| ||||  |||| |||||||||||  ||| | ||| |||||||||||| ||||| |||||||  ||| |||||||    
T  37578949 tcatatacttacccgttaccctactcatacccaacggggatgagaaattgaaccacatccccatccccgacgggttcgggtatccctgccccatcccc 37579046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 29855861 - 29855753
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc-catccccgactggttcaggtatcctcgc 291  Q
    ||||| ||||| || ||||||| | ||||||||| |||||  ||||  |||| ||||  ||||| |||||| |||||| ||| ||||||||||||| |||    
T  29855861 ataccatactcccaaatacttatttgttaccctatccatacccaacgaggatcagaagtcgaatttcatcctcatccctgacgggttcaggtatccccgc 29855762  T
Q  292 ctcatcccc 300  Q
    |||| ||||    
T  29855761 ctcaccccc 29855753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 140 - 287
Target Start/End: Original strand, 39728299 - 39728447
Alignment:
Q  140 cctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaaca 239  Q
    |||||||||  ||||||| | || ||||||| |||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||  ||||     
T  39728299 cctaggcatggcaatggggcggggtggggacgagttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacccatacccaacg 39728398  T
Q  240 gggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    |||||||||||  ||||||||| |||||||||||| ||||  |||||||    
T  39728399 gggatgagaaattgaatctcatccccatccccgacgggtttgggtatcc 39728447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 44252360 - 44252519
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| |||| ||||||| |||||||||||  |||| || |||||| | ||||||||||||||  |||||||||||||||  |||| ||    
T  44252360 taggcatggcaatggggcagggtggggacgagttttacctttcccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacggg 44252459  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||| ||| ||| |||||||| ||||| ||||||| |||| |||||||    
T  44252460 gatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccgccccatcccc 44252519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 23154454 - 23154317
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    |||||||  ||||||||||| |||||| ||||||| | |||||||||||||   ||||||||||||||||||||| |||||||||||   ||||||||||    
T  23154454 tggggacgggttttaccttccccgttcttatacccgattctcatatacttatccgttaccctacccatattcaacggggatgagaaattaaatctcatcc 23154355  T
Q  264 -catccccgactggttcaggtatcctcgcctcatcccc 300  Q
     | |||||||| ||||| ||||||| | || |||||||    
T  23154354 tcgtccccgacgggttcgggtatcccctccccatcccc 23154317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 34154035 - 34154194
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    ||||||| |||||||| | || |||||||  ||||||||||| |||| ||  ||||| | || |||||||||||  |||||||||||||||  | || ||    
T  34154035 taggcatgacaatggggcggggtggggacgggttttaccttccccgtccccgtacccgattcacatatacttacccgttaccctacccataccccacggg 34154134  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||||||| ||| |||||||| ||||| ||||||| ||||||||||||    
T  34154135 gatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgcctcatcccc 34154194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 44107246 - 44107109
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    ||||||| |||||||||||| |||| |  |||||| | ||||||||||||||  |||||||||||||||  |||| |||||||||||  ||||||||| |    
T  44107246 tggggacgagttttaccttccccgtcctcatacccgattctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatcc 44107147  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    || |||||||| ||||| ||||| | |||| |||||||    
T  44107146 ccgtccccgacgggttcgggtattcccgccccatcccc 44107109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 298
Target Start/End: Original strand, 44638894 - 44639051
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    ||||||| |||||| | | || |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||  |||| ||    
T  44638894 taggcatgacaatgtggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacggg 44638993  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcc 298  Q
     ||||||||  ||||||||| ||| |||||||| ||||||| ||||| |||| |||||    
T  44638994 aatgagaaattgaatctcatccccgtccccgacgggttcagatatccccgccccatcc 44639051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 7470246 - 7470088
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||  |||| ||    
T  7470246 taggcatggcaatggggcggggtggggacgggttttaccttc-ccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacggg 7470148  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||||||| ||| |||||||| ||||  ||||||| |||| |||||||    
T  7470147 gatgagaaattgaatctcatccccgtccccgacgggtttgggtatccccgccccatcccc 7470088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 30616774 - 30616665
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | || |||||||  |||||||| || || | || |||||||| ||||||||||||||| |||||||||||||||| |||||     
T  30616774 ctaggcatggcaatggggcggggtggggacgggttttaccatccccatccccataccctattctcatatacttacttgttaccctacccatatccaacaa 30616675  T
Q  241 ggatgagaaa 250  Q
    ||||||||||    
T  30616674 ggatgagaaa 30616665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 34025610 - 34025737
Alignment:
Q  174 ttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctca-tcccatccccga 272  Q
    ||||||||||||||| || |||||  | ||||||||||||||  |||||||||  ||||| |||| |||||||||||  ||||||||  ||| |||||||    
T  34025610 ttttaccttctccgtccccatacctgattctcatatacttacccgttaccctattcatatccaacggggatgagaaattgaatctcagccccgtccccga 34025709  T
Q  273 ctggttcaggtatcctcgcctcatcccc 300  Q
    | ||||| ||||||| |||| |||||||    
T  34025710 cgggttcgggtatccccgccccatcccc 34025737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 173 - 299
Target Start/End: Original strand, 49025332 - 49025459
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc-ccatccccg 271  Q
    ||||||||||| |||| |  |||||| | ||||||||||||||  |||||||||||||||| |||| |||||||||||  ||||| |||| || | ||||    
T  49025332 gttttaccttccccgtcctcatacccgattctcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatcacatcaccgttcccg 49025431  T
Q  272 actggttcaggtatcctcgcctcatccc 299  Q
    || ||||| ||||||| |||| ||||||    
T  49025432 acgggttcgggtatccccgccccatccc 49025459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 30905269 - 30905172
Alignment:
Q  166 gggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    ||||| |||||||||||| ||||||| ||||||||||  ||||| |||||  |||||||||||||||  |||| |||||  |||| ||||||||||||    
T  30905269 gggacgagttttaccttccccgttcccataccctacttccatattcttacctgttaccctacccatacccaacggggattggaaatcgaatctcatcc 30905172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 6738841 - 6738733
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| ||||||| |||||| | ||||||||||||||   ||||||||||||||  |||| ||    
T  6738841 taggcatggcaatggggcggggtggggacgggttttaccttccccgttcccatacccgattctcatatacttacccattaccctacccatacccaacggg 6738742  T
Q  242 gatgagaaa 250  Q
    |||||||||    
T  6738741 gatgagaaa 6738733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 164 - 287
Target Start/End: Original strand, 29283976 - 29284100
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  |||||||||||||||| |  |||||| | ||||||||||||||  ||||||||| |||||  |||| |||||||||||  ||||| ||| |    
T  29283976 tggggacgggttttaccttctccgtcctcatacccgattctcatatacttacccgttaccctatccatacccaacggggatgagaaattgaatcccatcc 29284075  T
Q  263 ccatccccgactggttcaggtatcc 287  Q
    || |||||||| ||||| |||||||    
T  29284076 ccgtccccgacgggttcgggtatcc 29284100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 298
Target Start/End: Complemental strand, 31127234 - 31127107
Alignment:
Q  172 agttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatcccc 270  Q
    |||||||| ||| |||| || |||||| | ||||||||||||||  |||||||||||||||| |||| || ||||||||  ||| | ||| ||| |||||    
T  31127234 agttttacattccccgtccccatacccgattctcatatacttacccgttaccctacccatatccaacgggaatgagaaattgaaccccatccccgtcccc 31127135  T
Q  271 gactggttcaggtatcctcgcctcatcc 298  Q
    ||| ||||| ||||||| |||| |||||    
T  31127134 gacgggttcgggtatccccgccccatcc 31127107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 202 - 300
Target Start/End: Original strand, 44179006 - 44179105
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||||||||  |||||||||||||||  ||||  ||||||||||  ||||||||| ||| |||||||| ||||| ||||||| |||| |||||||    
T  44179006 tctcatatacttacccgttaccctacccatacccaacgtggatgagaaattgaatctcatccccgtccccgacaggttcgggtatccccgccccatcccc 44179105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 44162403 - 44162493
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccata 232  Q
    |||||||  ||||||| | || ||||||| |||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||    
T  44162403 taggcatggcaatggggcggggtggggacgagttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccata 44162493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 17146568 - 17146460
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgc 291  Q
    |||||| | ||||||||||||||  ||||||||||||||| ||||| | ||||| |||  ||||||||| ||| |||||||  ||||| ||||||| |||    
T  17146568 atacccgattctcatatacttacccgttaccctacccatactcaacggagatgacaaattgaatctcatccccgtccccgatgggttcgggtatccccgc 17146469  T
Q  292 ctcatcccc 300  Q
    | |||||||    
T  17146468 cccatcccc 17146460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 42758019 - 42758127
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    ||||||| |||||||| |  | |||||||  ||||||| ||| || || | |||||| | ||||||||||||||  |||||||||||||||| |||| ||    
T  42758019 taggcatgacaatggggcgaggtggggacgggttttacattccccatttccatacccgattctcatatacttacccgttaccctacccatatccaacggg 42758118  T
Q  242 gatgagaaa 250  Q
    |||||||||    
T  42758119 gatgagaaa 42758127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 202 - 300
Target Start/End: Complemental strand, 48391219 - 48391120
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||||||||  |||||| |||||||| |||||  |||| |||||  ||||||||| ||| |||||||||||||| ||||||| | || |||||||    
T  48391219 tctcatatacttacctgttaccttacccatactcaacgaggattagaaattgaatctcatccccgtccccgactggttcgggtatccccaccccatcccc 48391120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 533
Target Start/End: Complemental strand, 37032249 - 37032207
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaa 533  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  37032249 gatttagggtttgagtttttatttatataaaatgggtaataaa 37032207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 16841728 - 16841623
Alignment:
Q  145 gcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggat 244  Q
    |||| ||||| || |||| |||||||| ||||||| ||  |||| || |||||| | ||||||||||||||  ||||| | |||||||| |||| |||||    
T  16841728 gcatgacaattgggcagggtggggacatgttttacatttcccgtcccaatacccgattctcatatacttacctgttactccacccatatccaacggggat 16841629  T
Q  245 gagaaa 250  Q
    ||||||    
T  16841628 gagaaa 16841623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 300
Target Start/End: Original strand, 23580469 - 23580605
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||  |||| ||||||||| |||||||||||  |||| |||| |    
T  23580469 tggggacgggttttaccttc-ccgtccccatacccgattctcatatacttacctgttacattacctatattcaacggggatgagaaattgaatttcatcc 23580567  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    || || ||||| ||||| ||||||| | || |||||||    
T  23580568 ccgtctccgacgggttcgggtatccccaccccatcccc 23580605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 142 - 263
Target Start/End: Complemental strand, 37032635 - 37032514
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    ||||||| ||||||||  ||| || |||  |||||||||||| |||| |  ||||| || | ||| ||||||||  |||||| |||||||||||| | |     
T  37032635 taggcatcacaatggggtagggtgaggatgagttttaccttccccgtcctcataccatattttcaaatacttacccgttaccatacccatattcagcgga 37032536  T
Q  242 gatgagaaagcgaatctcatcc 263  Q
    ||||||||| ||||||||||||    
T  37032535 gatgagaaatcgaatctcatcc 37032514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 300
Target Start/End: Original strand, 49579705 - 49579842
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  ||||||||||| |||| || |||||  | |||||| |||||||  |||||||||| |||||  ||| |||||||||||  |||| |||| |    
T  49579705 tggggacgggttttaccttccccgtccccatacctgattctcatgtacttacccgttaccctactcatatctaacggggatgagaaattgaatttcatcc 49579804  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    || |||||||  ||||| ||||||| |||| |||||||    
T  49579805 ccgtccccgaagggttcgggtatccacgccccatcccc 49579842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 305
Target Start/End: Original strand, 52197802 - 52197935
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccg 271  Q
    |||||||||||||||| || |||| | | ||||||||||||||  ||||| ||||  |||| |||| | |||||||||   |||||||| ||| ||||||    
T  52197802 gttttaccttctccgtccccatactcgattctcatatacttacccgttactctacttatatccaacggagatgagaaattaaatctcatccccgtccccg 52197901  T
Q  272 actggttcaggtatcctcgcctcatccccctctc 305  Q
    || ||||| | ||||| |||| ||||||| ||||    
T  52197902 acgggttcggttatccccgccccatccccgtctc 52197935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 23329834 - 23329898
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctca 260  Q
    ||||||||||||||||||||  |||| |||| |||||| |||| |||||||||||  ||||||||    
T  23329834 ccctactctcatatacttacccgttatcctatccatatccaacggggatgagaaattgaatctca 23329898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 23547447 - 23547339
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  |||||| |||| |||| || |||||| | |||||||||||||   |||||||||||||||  |||| ||    
T  23547447 taggcatggcaatggggcggggtggggacgggttttatcttccccgtccccatacccgattctcatatacttatccgttaccctacccatacccaacggg 23547348  T
Q  242 gatgagaaa 250  Q
    |||||||||    
T  23547347 gatgagaaa 23547339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 40796574 - 40796507
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||  |||||||||||| |||||| |||||||| ||||| |||||||||||  ||||||||||||    
T  40796574 ccctacttccatatacttactcgttacc-tacccatactcaacggggatgagaaattgaatctcatccc 40796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 48306928 - 48306848
Alignment:
Q  219 ttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcc 298  Q
    ||||||||| ||||| |||| || ||||||||  ||||||||| ||| | |||||| ||||||||||||| ||||||||||    
T  48306928 ttaccctactcatatccaacgggaatgagaaattgaatctcattcccgtacccgacgggttcaggtatccccgcctcatcc 48306848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 4016426 - 4016371
Alignment:
Q  218 gttaccctacccatattcaacagggatgagaaagcgaatctcatcccatccccgac 273  Q
    |||||||||||||||| ||||||||||||||||  ||| |||||||| || |||||    
T  4016426 gttaccctacccatatccaacagggatgagaaattgaacctcatcccttctccgac 4016371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 55439088 - 55439041
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaa 249  Q
    ||||||||||||||  |||||||||||||||| |||| ||||||||||    
T  55439088 tctcatatacttacccgttaccctacccatatccaacggggatgagaa 55439041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 38347216 - 38347315
Alignment:
Q  151 caatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| ||||| || ||||||||||||| |||||      || ||| ||| ||||||| ||||| ||||||||||| |||||||||  ||||||||||    
T  38347216 caatggggcaggacggagacaagttttaccgtctcc------atgcccgactttcatatatttactcgttaccctaccgatattcaacgaggatgagaaa 38347309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 39655672 - 39655610
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    ||||||||||||||   ||||||||||||||  ||||||||||||||||  ||||| ||||||    
T  39655672 tctcatatacttacccattaccctacccatacccaacagggatgagaaattgaatcccatccc 39655610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Original strand, 27252183 - 27252240
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||| || ||||||||||||| | |||||||||||||||  |||| |||||||||||    
T  27252183 ataccttattctcatatacttatttgttaccctacccatacccaacggggatgagaaa 27252240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 2487444 - 2487512
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||  |||||||||||  |||||| ||||||||| |||| |||||||||||  |||| |||||||    
T  2487444 ccctacttccatatacttacctgttaccttacccatatccaacggggatgagaaattgaatttcatccc 2487512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 50427101 - 50426965
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    |||||| | |||||||||||||| | || |||||| | ||||||||||||||  |||||||||||||||||||||  ||||||||||  |||||||||||    
T  50427101 tggggataggttttaccttctccatccccatacccgattctcatatacttacccgttaccctacccatattcaacgaggatgagaaattgaatctcatcc 50427002  T
Q  264 catccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |   |||||| ||||| ||||||| | ||||||||||    
T  50427001 ccgtcccgacgggttcgggtatccccacctcatcccc 50426965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 20774251 - 20774410
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||| |||| ||    
T  20774251 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatatccaacggg 20774350  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||| ||| ||| |||||||| ||||| ||||||| |||| |||||||    
T  20774351 gatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccgccccatcccc 20774410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 40087927 - 40087768
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    ||||||| |||||||| | || |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||  |||  ||    
T  40087927 taggcatgacaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaatggg 40087828  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||||||| ||| |||||||| ||||| ||||||| |||| |||||||    
T  40087827 gatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgccccatcccc 40087768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 18354540 - 18354383
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| ||||  ||||| || | ||||||||||||||  |||||||||||||||| |||| ||    
T  18354540 taggcatggcaatggggcggggtggggacgggttttaccttccccgtctctatatccgattctcatatacttacccgttaccctacccatatccaacggg 18354441  T
Q  242 gatgagaaagcgaatctcatcccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||| |||||| |||||||| ||||| ||||||||| || |||||||    
T  18354440 gatgagaaattgaatcacatcccgtccccgacgggttc-ggtatcctcaccccatcccc 18354383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 142 - 263
Target Start/End: Original strand, 5180670 - 5180791
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||| |||||||   || ||||||| |||||||||||| |||| ||||||||| | ||||||||||||||   ||||||||||||||| |||| ||    
T  5180670 taggcattgcaatggggtggggtggggacgagttttaccttccccgtccctatacccgattctcatatacttacccattaccctacccatatccaacggg 5180769  T
Q  242 gatgagaaagcgaatctcatcc 263  Q
    |||||||||  |||||||||||    
T  5180770 gatgagaaattgaatctcatcc 5180791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 13390073 - 13390233
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    |||||||| |||||||| | || |||||||  ||||||||||| |||| || |||||| | |||||||||||||   |||||||||||||||| |||| |    
T  13390073 ctaggcatgacaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttaaccgttaccctacccatatccaacgg 13390172  T
Q  241 ggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||||  ||||| ||| ||| |||||||| ||||| ||||||| | || |||||||    
T  13390173 ggatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccaccccatcccc 13390233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 173 - 300
Target Start/End: Original strand, 34610724 - 34610852
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc-catccccg 271  Q
    ||||||||||| |||| || |||||| | ||||||||||||||| |||||||||||||||  |||| |||||||||||  ||||||||||| | ||||||    
T  34610724 gttttaccttccccgtccccatacccgattctcatatacttactcgttaccctacccatacccaacggggatgagaaattgaatctcatcctcgtccccg 34610823  T
Q  272 actggttcaggtatcctcgcctcatcccc 300  Q
    || ||||| |||||||  ||| |||||||    
T  34610824 acgggttcgggtatccctgccccatcccc 34610852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 300
Target Start/End: Original strand, 24710499 - 24710636
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  ||||||||||| ||||  | |||||| | ||||||||||||||  ||||||||||| ||| ||||| |||||||||||  ||||||||| |    
T  24710499 tggggacgggttttaccttccccgtctccatacccgattctcatatacttacctgttaccctacctatactcaacggggatgagaaattgaatctcatcc 24710598  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    || |||||||| ||||| ||||||| |||| |||||||    
T  24710599 ccgtccccgacgggttcgggtatccccgccccatcccc 24710636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 164 - 264
Target Start/End: Complemental strand, 23493772 - 23493672
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  ||||||||||||||||||||| |||||||||||  ||||| |||||    
T  23493772 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatattcaacggggatgagaaattgaatcccatcc 23493673  T
Q  264 c 264  Q
    |    
T  23493672 c 23493672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 42440104 - 42439982
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| |||| || |||| |||||||||||| ||| ||| |||||  | ||||||||||||||  |||||||||||||||| |||| ||    
T  42440104 taggcatggcaatggggcagggtgtggacgagttttaccttccccgctcccatacctgattctcatatacttacccgttaccctacccatatccaacggg 42440005  T
Q  242 gatgagaaagcgaatctcatccc 264  Q
    |||||||||  ||||| ||||||    
T  42440004 gatgagaaattgaatcacatccc 42439982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 264
Target Start/End: Original strand, 8880020 - 8880131
Alignment:
Q  152 aatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaag 251  Q
    |||||| | ||||||||||  |||||||| || |||| |  |||||||||||  |||||||||||  |||||||||||||||||| | |||||||||||     
T  8880020 aatggggcgggatggggacgggttttaccgtccccgtcctcataccctactcctatatacttactcattaccctacccatattcagc-gggatgagaaat 8880118  T
Q  252 cgaatctcatccc 264  Q
    |||||||||||||    
T  8880119 cgaatctcatccc 8880131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 151 - 250
Target Start/End: Original strand, 44792633 - 44792732
Alignment:
Q  151 caatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| | || |||||||  ||||||| ||| |||| || |||||| | ||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  44792633 caatggggcggggtggggacgggttttacattccccgtccccatacccgattctcatatacttacccgttaccctacccatattcaacggggatgagaaa 44792732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 492 - 576
Target Start/End: Complemental strand, 43513179 - 43513094
Alignment:
Q  492 atttagggtttgagtttctatttatataaaatggataataaactga-tttgtacattcgaaacaggtttttgtatgagtttgaggt 576  Q
    ||||||||||||||||||||||||||||||| |  | ||||| ||| ||| |||||||||||| |||||  |||||||||||||||    
T  43513179 atttagggtttgagtttctatttatataaaaagagttataaattgattttttacattcgaaacgggtttgagtatgagtttgaggt 43513094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 19892624 - 19892692
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    ||||||||||||||||||||| |||||||||||||||   ||| |||||||||||  ||||||||||||    
T  19892624 ccctactctcatatacttacttgttaccctacccatacataacggggatgagaaattgaatctcatccc 19892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 164 - 299
Target Start/End: Original strand, 28297574 - 28297710
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  ||||||| |||||||  |||| || ||||||||  ||||| ||| |    
T  28297574 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttacccgacccatacccaacgggaatgagaaattgaatcccatcc 28297673  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatccc 299  Q
    || |||||||| ||||| ||||||| |||| ||||||    
T  28297674 ccgtccccgacgggttcgggtatccccgccccatccc 28297710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 32594515 - 32594674
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    ||||||| ||||||||   || ||||||| ||| ||||||||||||| || ||| || | | | ||||||||||  |||||||||||||||  |||| ||    
T  32594515 taggcatgacaatggggtggggtggggacgagtattaccttctccgtacccatatccgatttttatatacttacccgttaccctacccatacccaacggg 32594614  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||||||| ||| | |||||  ||||| ||||||| |||| |||||||    
T  32594615 gatgagaaattgaatctcatccccgtacccgatgggttcgggtatccccgccccatcccc 32594674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 151 - 292
Target Start/End: Original strand, 16903132 - 16903274
Alignment:
Q  151 caatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| | || ||||||| ||| |||||||| || | || ||||||||||| ||| || |||   |||||||||||||||| || | |||||||||||    
T  16903132 caatggggcggggtggggacgagtattaccttccccatccccataccctactcccatttatttatccgttaccctacccatatccatcggggatgagaaa 16903231  T
Q  251 gcgaatctcat-cccatccccgactggttcaggtatcctcgcc 292  Q
     |||||| ||| ||| |||||||| ||||| ||||||| ||||    
T  16903232 tcgaatcccatccccgtccccgacgggttcgggtatccccgcc 16903274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 17092369 - 17092283
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    |||||||| |||||  |||||||||| ||||| ||||||||||||||||  ||||||||| ||| |||||||| ||||| |||||||    
T  17092369 tctcatatgcttacccgttaccctacacatatccaacagggatgagaaattgaatctcatccccgtccccgacgggttcgggtatcc 17092283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 24237198 - 24237084
Alignment:
Q  174 ttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc-catccccga 272  Q
    ||||||||||  ||| || |||||| | ||||||||||||||| ||||||| |||||||  |||| |||||||||||  ||||||||||| | | |||||    
T  24237198 ttttaccttcctcgtccccatacccgattctcatatacttactcgttaccccacccatacccaacggggatgagaaattgaatctcatcctcgtgcccga 24237099  T
Q  273 ctggttcaggtatcc 287  Q
    | ||||| |||||||    
T  24237098 cgggttcgggtatcc 24237084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 17134617 - 17134686
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc 262  Q
    |||||| | ||||||||||||||  |||||||||| |||| |||||||||||||||||  ||||||||||    
T  17134617 atacccaattctcatatacttacccgttaccctactcatactcaacagggatgagaaattgaatctcatc 17134686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 250
Target Start/End: Complemental strand, 5293915 - 5293815
Alignment:
Q  150 acaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaa 249  Q
    |||||||| |||  ||||||| |||||||| ||||| || || ||| | |||||||||||| ||||| |||||||||||||||  || ||| ||||||||    
T  5293915 acaatggggcagagtggggacgagttttactttctctgtccccatatcatactctcatatatttactcgttaccctacccatacccagcagagatgagaa 5293816  T
Q  250 a 250  Q
    |    
T  5293815 a 5293815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 23966476 - 23966636
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | || ||||||| |||||||||||| |||| || ||| || | ||||||||||||||   ||||||||||||||  ||||      
T  23966476 ctaggcatggcaatggggcggggtggggacgagttttaccttccccgtccccataaccgattctcatatacttacccattaccctacccatacccaacga 23966575  T
Q  241 ggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
     |||||||||  ||||| ||| ||| |||||||| ||||| ||||||| | || |||||||    
T  23966576 agatgagaaattgaatcccatccccgtccccgacgggttctggtatccccaccccatcccc 23966636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 522
Target Start/End: Original strand, 39219139 - 39219227
Alignment:
Q  434 aactttgagaagtgagtgtcatctaagaaattgagactatgattgtgttcgaggaacgatttagggtttgagtttctatttatataaaa 522  Q
    |||| ||| ||||||||||||| | | ||| ||||||| ||| |||||  | | || ||||||||||||||||||||||||||||||||    
T  39219139 aactatgataagtgagtgtcatatgaaaaaatgagactgtgactgtgtgagcgaaatgatttagggtttgagtttctatttatataaaa 39219227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 29936096 - 29936187
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcc 292  Q
    |||||||| |||||  |||||||||||||||| |||| |||||||||||  ||||| ||| ||| |||||||| ||||| ||||||| ||||    
T  29936096 tctcatatgcttacccgttaccctacccatatccaacggggatgagaaattgaatcacatccccgtccccgacgggttcgggtatccccgcc 29936187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 44615936 - 44615837
Alignment:
Q  151 caatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| | || |||||||  ||||||| ||| |||| || |||||| | |||||| |||||||  ||||||||||||||||| ||| |||||||||||    
T  44615936 caatggggcggggtggggacgggttttacattccccgtccccatacccgattctcatgtacttacccgttaccctacccatatttaacggggatgagaaa 44615837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 51421565 - 51421636
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||| | ||||||||||||||  |||||||||| ||||| |||| |||||||||||  ||||||||||||    
T  51421565 atacccgattctcatatacttacccgttaccctactcatatccaacggggatgagaaattgaatctcatccc 51421636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 589
Target Start/End: Complemental strand, 5283795 - 5283645
Alignment:
Q  440 gagaagtgagtgtcatctaagaaattgagactatgattgtgttcgaggaacgatttagggtttgagtttctatttatataaaatggataataaactga-t 538  Q
    ||||||||||||||  || | ||||||  ||| |||||||||  ||| || ||||||  ||||||||| ||||||||| |||| |||| ||||| ||| |    
T  5283795 gagaagtgagtgtcgcctgacaaattgccactttgattgtgtgagagaaatgatttaaagtttgagttcctatttatacaaaagggatgataaattgatt 5283696  T
Q  539 ttgtacattcgaaacaggtttttgtatgagtttgaggtgggtacttatatc 589  Q
    || |||| || | || |||||  ||||||||| ||||||||||||| ||||    
T  5283695 ttctacaatccagacgggtttaggtatgagttcgaggtgggtacttctatc 5283645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 549
Target Start/End: Original strand, 23719549 - 23719599
Alignment:
Q  499 gtttgagtttctatttatataaaatggataataaactgatttgtacattcg 549  Q
    |||||||||||||||||||||||| || || |||| |||||||||||||||    
T  23719549 gtttgagtttctatttatataaaaagggtagtaaattgatttgtacattcg 23719599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 34673668 - 34673606
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    ||||||||||||||  |||||||||||||||| |||| |||||||||||  ||| ||||||||    
T  34673668 tctcatatacttacccgttaccctacccatatccaacggggatgagaaattgaacctcatccc 34673606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 36187691 - 36187569
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| |||| || ||| || | |||| |||||||||  |||||||||||||||  |||| ||    
T  36187691 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatatccgattctcgtatacttacccgttaccctacccatacccaacggg 36187592  T
Q  242 gatgagaaagcgaatctcatccc 264  Q
    |||||||||  ||||| ||||||    
T  36187591 gatgagaaattgaatcccatccc 36187569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 13020370 - 13020465
Alignment:
Q  206 atatacttactagttaccctacccatattcaacagggatgagaaagcgaatctca--tcccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||||  ||||||||||| ||| ||||| |||||||||||  ||||||||   ||||| |||||| ||||| ||||||| ||||||||||||    
T  13020370 atatacttacccgttaccctacctatactcaacggggatgagaaattgaatctcaacccccatacccgacgggttcgggtatcc-cgcctcatcccc 13020465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 14892337 - 14892410
Alignment:
Q  154 tgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctac 227  Q
    |||||| || |||||||  ||||||||||| |||| || |||||||| ||||||||||||||  ||||||||||    
T  14892337 tgggactgggtggggacgggttttaccttccccgtccccataccctattctcatatacttacccgttaccctac 14892410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 29871702 - 29871645
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    |||||| | ||||||||||||||| |||||||||| |||| ||||| |||||||||||    
T  29871702 atacccgattctcatatacttacttgttaccctactcatactcaactgggatgagaaa 29871645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 540
Target Start/End: Complemental strand, 33293671 - 33293622
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactgattt 540  Q
    ||||||||||||||||||||||| ||||||||||| || |||| ||||||    
T  33293671 gatttagggtttgagtttctattgatataaaatgggtactaaattgattt 33293622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 43513493 - 43513392
Alignment:
Q  161 ggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctca 260  Q
    |||| ||||||||||||| ||||| |||  | ||| | |||||||||||| ||||  |||||||||| |||||||||   |||| ||||| |||||||||    
T  43513493 ggatagggacaagttttatcttcttcgtctcaatatcttactctcatatatttacatgttaccctactcatattcaatgaggatcagaaatcgaatctca 43513394  T
Q  261 tc 262  Q
    ||    
T  43513393 tc 43513392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 25155365 - 25155257
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  |||||||  ||| |||||||  |||||||||||  ||| || |||||||||| |||||| ||||   |||||||||| ||||| |||| ||    
T  25155365 taggcatggcaatggggtagggtggggacgggttttaccttcatcgtccccataccctactttcatatgcttatccgttaccctactcatatccaacggg 25155266  T
Q  242 gatgagaaa 250  Q
    |||||||||    
T  25155265 gatgagaaa 25155257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 19572901 - 19572842
Alignment:
Q  205 catatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||||||  |||||||||||||||  |||| |||||||||||  ||||||||||||    
T  19572901 catatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccc 19572842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 45866655 - 45866496
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| |||| |  |||| | | ||||||||||||||  ||||| ||||| |||  |||| ||    
T  45866655 taggcatggcaatggggcggggtggggacgtgttttaccttccccgtcctcatactcgattctcatatacttacccgttactctacctatacccaacggg 45866556  T
Q  242 gatgagaaagcgaatctcatc-ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||| |||||  |||||||||| || |||||||| | ||| ||||||| | ||||||||||    
T  45866555 gataagaaattgaatctcatctccgtccccgacggattcgggtatccccacctcatcccc 45866496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 533
Target Start/End: Original strand, 13692582 - 13692624
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaa 533  Q
    ||||||||||||  |||||||||||||||||| ||||||||||    
T  13692582 gatttagggttttggtttctatttatataaaagggataataaa 13692624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 38686348 - 38686418
Alignment:
Q  218 gttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    |||||||||||| ||| |||| ||||| |||||  ||||||||| ||| |||||||| |||||||||||||    
T  38686348 gttaccctacccttatccaacggggatcagaaattgaatctcatccccgtccccgacgggttcaggtatcc 38686418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 533
Target Start/End: Complemental strand, 47645010 - 47644968
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaa 533  Q
    |||||||| | ||||||||||||||||||||| ||||||||||    
T  47645010 gatttaggatctgagtttctatttatataaaagggataataaa 47644968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 49251201 - 49251111
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccata 232  Q
    |||||||  ||||||| | || |||||||  ||||||||||| |||| || ||| || | |||||||||| |||| |||||||||||||||    
T  49251201 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatatccgattctcatatacatactggttaccctacccata 49251111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 540
Target Start/End: Original strand, 2581511 - 2581559
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactgattt 540  Q
    ||||||| |||||||||||||||||||||||| ||||| |||| ||||||    
T  2581511 gatttagagtttgagtttctatttatataaaa-ggatattaaattgattt 2581559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 35937261 - 35937204
Alignment:
Q  167 ggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccc 224  Q
    ||||||||||||| ||| |||| ||||||||| | ||||||||||||||  |||||||    
T  35937261 ggacaagttttacattccccgtccctatacccgattctcatatacttacctgttaccc 35937204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 45460457 - 45460396
Alignment:
Q  203 ctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||||||||  || |||||||||||| ||| | ||||||||||| |||||| ||||||    
T  45460457 ctcatatacttacccgtcaccctacccatactcagctgggatgagaaatcgaatcacatccc 45460396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 142 - 246
Target Start/End: Complemental strand, 9983355 - 9983251
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | ||||||| || |||||||| ||| ||||  | |||||| | ||||| ||||||||  |||||||||||||||| || | ||    
T  9983355 taggcatggcaatggggcgggatgggaacgagttttacattccccgtctccatacccgattctcacatacttacctgttaccctacccatatccagcggg 9983256  T
Q  242 gatga 246  Q
    |||||    
T  9983255 gatga 9983251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 248
Target Start/End: Complemental strand, 12719240 - 12719144
Alignment:
Q  152 aatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgaga 248  Q
    |||||| |||| ||||| || ||||| |||||||| || | ||  | ||||| ||||||||||   |||||||||||||||| |||| |||||||||    
T  12719240 aatggggcagggtgggggcaggtttttccttctccattaccatctcatactcccatatacttatccgttaccctacccatatccaacggggatgaga 12719144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 540
Target Start/End: Original strand, 16903454 - 16903502
Alignment:
Q  492 atttagggtttgagtttctatttatataaaatggataataaactgattt 540  Q
    ||||||||||||||||| ||||||||||||| ||  |||||| ||||||    
T  16903454 atttagggtttgagtttatatttatataaaaagggcaataaattgattt 16903502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 35077619 - 35077551
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||| ||| |||||||||||  |||||||||||||||  |||| | |||||||||  ||||||||||||    
T  35077619 ccctgctcccatatacttacctgttaccctacccatacccaacggagatgagaaattgaatctcatccc 35077551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 7e-23; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 3484392 - 3484233
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| |||| ||||||||| | ||||||||||||||  |||||||||||||||  |||| ||    
T  3484392 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccctatacccgattctcatatacttacccgttaccctacccatacccaacggg 3484293  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||| ||| ||| |||||||| ||||| ||||||| |||| |||||||    
T  3484292 gatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccgccccatcccc 3484233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 139 - 300
Target Start/End: Original strand, 32853460 - 32853622
Alignment:
Q  139 gcctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaac 238  Q
    ||||||||||  ||||||| | || ||| |||  ||||||||||| || | || |||||| | | |||||||||||| ||||||||||||||||  ||||    
T  32853460 gcctaggcatggcaatggggcggggtggagacgggttttaccttccccatccccatacccgattatcatatacttaccagttaccctacccatacccaac 32853559  T
Q  239 agggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
     |||||||||||  ||||||||| |||||||||||| ||||| ||||||| |||| |||||||    
T  32853560 ggggatgagaaattgaatctcatccccatccccgacgggttcgggtatccccgccccatcccc 32853622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 161 - 300
Target Start/End: Original strand, 32052694 - 32052834
Alignment:
Q  161 ggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctca 260  Q
    |||||| ||| |||||||||||| |||| |  |||||| | ||||||||||||||  |||||||||||||||| |||| |||||||||||  ||||||||    
T  32052694 ggatggagacgagttttaccttccccgtcctcatacccgattctcatatacttacccgttaccctacccatatccaacggggatgagaaattgaatctca 32052793  T
Q  261 t-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    | ||| || || || ||||| ||||||| ||||||||||||    
T  32052794 tccccgtctccaacgggttccggtatccccgcctcatcccc 32052834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 142 - 299
Target Start/End: Complemental strand, 10142986 - 10142828
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | |||| ||||| |||||||||||| ||||||  ||| || | |||| |||||||||  ||||||||||||||| ||||| ||    
T  10142986 taggcatggcaatggggcgggatagggacgagttttaccttccccgttctcatatccgattctcgtatacttacccgttaccctacccatactcaacggg 10142887  T
Q  242 gatgagaaagcgaatctcatcc-catccccgactggttcaggtatcctcgcctcatccc 299  Q
    |||||||||  ||||| ||||| | |||||||| ||||| ||||||| |||| ||||||    
T  10142886 gatgagaaattgaatcccatcctcgtccccgacgggttcgggtatccccgccccatccc 10142828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 142 - 285
Target Start/End: Original strand, 9442268 - 9442412
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    ||||||| |||||||||| || |||||||  ||||||||||| ||||  | |||||| | ||||||||||||||  |||||| ||||||||| |||| ||    
T  9442268 taggcatgacaatgggacggggtggggacgggttttaccttccccgtctccatacccgattctcatatacttacccgttaccttacccatatccaacggg 9442367  T
Q  242 gatgagaaagcgaatctca-tcccatccccgactggttcaggtat 285  Q
    |||||||||  |||||||| |||| ||| |||| ||||| |||||    
T  9442368 gatgagaaattgaatctcattcccgtcctcgacgggttcgggtat 9442412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 287
Target Start/End: Complemental strand, 5863842 - 5863695
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | || |||||||  ||||||||||| |||| || |||||  | ||||||||||||||  |||||||||||||||  |||| |    
T  5863842 ctaggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacctgattctcatatacttacccgttaccctacccatacccaacgg 5863743  T
Q  241 ggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    ||||||||||  ||||||||| ||| |||||||| ||||| |||||||    
T  5863742 ggatgagaaattgaatctcatccccgtccccgacgggttcgggtatcc 5863695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 10188543 - 10188384
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || ||||||| |||||||||||| || | || |||||| | ||||||||||||||  |||||||||||||||  |||| ||    
T  10188543 taggcatggcaatggggcggggtggggacgagttttaccttccccatccccatacccgattctcatatacttacctgttaccctacccatacccaacggg 10188444  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||| ||| ||| ||||||||  |||| ||||||| |||| |||||||    
T  10188443 gatgagaaattgaatcccatccccgtccccgacgagttcgggtatccccgccccatcccc 10188384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 142 - 287
Target Start/End: Original strand, 12141016 - 12141162
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || ||||||| |||||||||||| |||| || |||||| | ||||||||||||||  ||||| |||||||||  |||| ||    
T  12141016 taggcatggcaatggggcggggtggggacgagttttaccttccccgtccccatacccgattctcatatacttacccgttactctacccatacccaacggg 12141115  T
Q  242 gatgagaaagcgaatctcatc-ccatccccgactggttcaggtatcc 287  Q
    |||||||||  |||||||||| || |||||||| ||||  |||||||    
T  12141116 gatgagaaattgaatctcatcgccgtccccgacgggtttgggtatcc 12141162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 141 - 298
Target Start/End: Original strand, 24225319 - 24225476
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | || |||||||  ||||||||||| |||| || |||||| | ||||||||||||||| |||||||||||||||| |||| |    
T  24225319 ctaggcatggcaatggggcggggtggggacgggttttaccttc-ccgtccccatacccgattctcatatacttactcgttaccctacccatatccaacgg 24225417  T
Q  241 ggatgagaaagcgaatctcatc-ccatccccgactggttcaggtatcctcgcctcatcc 298  Q
     |||||||||  ||||| |||| || || ||||| ||||| ||||||| |||| |||||    
T  24225418 tgatgagaaattgaatcacatcgccgtctccgacgggttcgggtatccccgccccatcc 24225476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 34179529 - 34179417
Alignment:
Q  151 caatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| |||| ||||||| ||||| |||||| |||| |  |||||||||||||||||||||||  |||| ||||||||||| |||||||||||| |||    
T  34179529 caatggggcagggtggggacgagtttcaccttccccgtcctcataccctactctcatatacttacccgtta-cctacccatatccaacagggatgaaaaa 34179431  T
Q  251 gcgaatctcatccc 264  Q
      ||||| ||||||    
T  34179430 ttgaatcccatccc 34179417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 3244992 - 3245092
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    |||||||| |||||| ||||  ||| || |||||||||||||||||||||||| |||| |||| |||||| |||| | |||| |||| ||||||||||||    
T  3244992 tggggacatgttttatcttccacgtccccataccctactctcatatacttacttgttatcctatccatatccaacggagatgcgaaatcgaatctcatcc 3245091  T
Q  264 c 264  Q
    |    
T  3245092 c 3245092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 307
Target Start/End: Original strand, 14254625 - 14254745
Alignment:
Q  188 ttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatc 286  Q
    |||| |||||| | ||||||||||||||  |||||||||| |||||  |||| ||||||||||  ||||||||| ||| |||||||| ||||| ||||||    
T  14254625 ttcccatacccgattctcatatacttacatgttaccctactcatatcgaacatggatgagaaattgaatctcatccccgtccccgacgggttcgggtatc 14254724  T
Q  287 ctcgcctcatccccctctctg 307  Q
    |  ||||||||||| ||||||    
T  14254725 cctgcctcatccccgtctctg 14254745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 174 - 264
Target Start/End: Original strand, 9402194 - 9402284
Alignment:
Q  174 ttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    ||||||||||||||| || |||||||||||  | ||||||||  |||||||||||||||| || | | ||||||||| |||||||||||||    
T  9402194 ttttaccttctccgtccccataccctactcctaaatacttacccgttaccctacccatatccagcggagatgagaaatcgaatctcatccc 9402284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 287
Target Start/End: Original strand, 27534314 - 27534460
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| |||| || |||||| | |||||||||||||   |||||||||||||||  |||| ||    
T  27534314 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttaaccgttaccctacccatacccaacggg 27534413  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    |||||||||  ||||| ||| ||| |||||||| ||||| |||||||    
T  27534414 gatgagaaattgaatcacatccccgtccccgacgggttcgggtatcc 27534460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 300
Target Start/End: Original strand, 2366943 - 2367104
Alignment:
Q  140 cctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaaca 239  Q
    |||||||||  ||||||| | || |||||||  |||||||||||  | | || ||| || | ||||||||||||||  |||||||||| ||||  ||||     
T  2366943 cctaggcatggcaatggggcggggtggggacgggttttaccttcctcatccccatatccgattctcatatacttacatgttaccctactcatacccaacg 2367042  T
Q  240 gggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||||  ||||||||| ||| |||||||| ||||| ||||||| |||| |||||||    
T  2367043 gggatgagaaattgaatctcatccccgtccccgacgggttcgggtatccccgccccatcccc 2367104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 9458371 - 9458439
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||| |||||||||||  |||||||||||||||  |||| |||||||||||  ||||||||||||    
T  9458371 ccctactcccatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccc 9458439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 533
Target Start/End: Complemental strand, 10925672 - 10925552
Alignment:
Q  413 gtatggaacgagaagagataaaactttgagaagtgagtgtcatctaagaaattgagactatgattgtgttcgaggaacgatttagggtttgagtttctat 512  Q
    |||||||| ||||||||| | ||||| |||||||||||||| | | | | | | | ||| |||||||||| | | || |||||||||||| || ||||||    
T  10925672 gtatggaaggagaagagagagaacttagagaagtgagtgtcgtttgaaagactaaaactttgattgtgttagtgaaatgatttagggtttcagattctat 10925573  T
Q  513 ttatataaaatggataataaa 533  Q
    |||||||||| | ||||||||    
T  10925572 ttatataaaaggaataataaa 10925552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 2127097 - 2127030
Alignment:
Q  197 cctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||| ||||||||||||  |||||| ||| |||||||||||| ||||||||| ||||||| |||||    
T  2127097 cctactatcatatacttacatgttaccttactcatattcaacagagatgagaaatcgaatcttatccc 2127030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 14505740 - 14505826
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    |||||||  ||||||| |||  ||| || |||||| | ||||||||||||||  |||||||||||||||| |||| |||||||||||    
T  14505740 tggggacgggttttacattcctcgtccccatacccgattctcatatacttacccgttaccctacccatatccaacggggatgagaaa 14505826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 20611325 - 20611257
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||| |||||||||||  |||||| ||||||||  |||| |||||||||||  ||||||||||||    
T  20611325 ccctactcccatatacttacctgttaccatacccatacccaacggggatgagaaattgaatctcatccc 20611257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 292
Target Start/End: Complemental strand, 1948319 - 1948169
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    ||||||| ||||| ||  ||||||| ||| ||||||||||||||  |||  ||||| || ||  ||||||||||  |||||||||||||||| || | ||    
T  1948319 taggcatgacaatagggtaggatggagacgagttttaccttctct-ttctcataccttagtcctatatacttacccgttaccctacccatatccagcggg 1948221  T
Q  242 gatgagaaagcgaatctcatcc-catccccgactggttcaggtatcctcgcc 292  Q
    || |||||| |||||| ||||| | |||||||| ||||  |||||| |||||    
T  1948220 gacgagaaatcgaatcccatcctcgtccccgacaggttggggtatcatcgcc 1948169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 10925952 - 10925853
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    |||||||  ||||||||||| || | | |||| | ||||| || ||||||| |  ||||||||||||||| |||| ||||||||||  ||||||||||||    
T  10925952 tggggacgggttttaccttcaccatccttataacttactcccaaatacttagttattaccctacccatatccaacggggatgagaagtcgaatctcatcc 10925853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 522
Target Start/End: Complemental strand, 34179160 - 34179129
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaa 522  Q
    ||||||||||||||||||||||||||||||||    
T  34179160 gatttagggtttgagtttctatttatataaaa 34179129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 520
Target Start/End: Complemental strand, 34346242 - 34346136
Alignment:
Q  414 tatggaacgagaagagataaaactttgagaagtgagtgtcatctaagaaattgagactatgattgtgttcgaggaacgatttagggtttgagtttctatt 513  Q
    |||||||  |||| ||||| |||| ||| |||||| | |||||||| | | ||||||| ||| |||||  | | || ||||||||||||| |||||||||    
T  34346242 tatggaagaagaaaagatagaactatgataagtgactctcatctaaaagactgagactctgactgtgtgagtgaaatgatttagggtttgggtttctatt 34346143  T
Q  514 tatataa 520  Q
    |||||||    
T  34346142 tatataa 34346136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 559
Target Start/End: Original strand, 9402526 - 9402595
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactga-tttgtacattcgaaacaggttt 559  Q
    ||||||||||||| |||||||||||||||||  || || |||| ||| ||| ||||||||| ||||||||    
T  9402526 gatttagggtttgggtttctatttatataaatggggtactaaattgattttctacattcgagacaggttt 9402595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 29200317 - 29200249
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||| |||||||||||  ||||||| ||||||   |||| |||||||||||  ||||||||||||    
T  29200317 ccctactcccatatacttacccgttacccaacccatgaccaacggggatgagaaattgaatctcatccc 29200249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 30815930 - 30815978
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||||||||||  ||||||||| | |||| ||||||||||||||||    
T  30815930 tctcatatacttacccgttaccctatctatatccaacagggatgagaaa 30815978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 4e-21; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 164 - 264
Target Start/End: Complemental strand, 6389012 - 6388912
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    |||||||  ||||||||||| |||| || |||| ||||||||||||||||||  |||||||||||||||| || | ||||||||||| ||||||||||||    
T  6389012 tggggacgggttttaccttccccgtccccatactctactctcatatacttacctgttaccctacccatatccagcggggatgagaaatcgaatctcatcc 6388913  T
Q  264 c 264  Q
    |    
T  6388912 c 6388912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 17220336 - 17220458
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  |||||||||||||||| || |||||| | ||||||||||||||  ||||||||| |||||| |||||||    
T  17220336 taggcatggcaatggggcggggtggggacgggttttaccttctccgtccccatacccgattctcatatacttacccgttaccctatccatatccaacagg 17220435  T
Q  242 gatgagaaagcgaatctcatccc 264  Q
    |||||||||  ||||| ||||||    
T  17220436 gatgagaaattgaatcccatccc 17220458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 142 - 287
Target Start/End: Original strand, 24927568 - 24927714
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||||| || |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||  |||| ||    
T  24927568 taggcatggcaatgggacggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacggg 24927667  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    |||||||||  ||||| ||| ||| |||||||| ||||| |||||||    
T  24927668 gatgagaaattgaatcccatccccgtccccgacgggttcgggtatcc 24927714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 33633451 - 33633292
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | ||||||||||  |||||||||||  ||| || ||||||||||| || ||||||||  |||||||||||||||  |||| ||    
T  33633451 taggcatggcaatggggcgggatggggacgggttttaccttcctcgtccccataccctactcccaaatacttacatgttaccctacccatacccaacggg 33633352  T
Q  242 gatgagaaagcgaatctcatccc-atccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||| ||||| |||||  ||||||  |||||||| ||||||||||||| | || |||||||    
T  33633351 gataagaaatcgaattgcatccctgtccccgacgggttcaggtatccccaccccatcccc 33633292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 164 - 305
Target Start/End: Complemental strand, 2076283 - 2076141
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||  |||| |||||||||||  ||||||||| |    
T  2076283 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatcc 2076184  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatccccctctc 305  Q
    || |||||||| ||||| | ||||  |||| ||||||| ||||    
T  2076183 ccgtccccgacgggttcggttatctccgccccatccccgtctc 2076141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 17468875 - 17469034
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || || |||| |||||||| ||| |||| || |||||| | |||||||||||||   ||||||||||||||||||||| ||    
T  17468875 taggcatggcaatggggcggggtgaggacgagttttacattccccgtccccatacccgattctcatatacttatccgttaccctacccatattcaacggg 17468974  T
Q  242 gatgagaaagcgaatctcatcc-catccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||| |||  |||  |||||| |||||||||| ||||| |||||||  ||| |||||||    
T  17468975 gatgataaattgaacttcatcctcatccccgacgggttcgggtatccctgccccatcccc 17469034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 32302679 - 32302838
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||  ||||  |    
T  32302679 taggcatggcaatggggcggggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccatacccaacgag 32302778  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||| ||| ||| | |||||| ||||| ||||||| |||| |||||||    
T  32302779 gatgagaaattgaatcccatccccgttcccgacgggttcgggtatccccgccccatcccc 32302838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 34301623 - 34301464
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| || | || |||||| | | ||||||||||||  |||||||||||||||  |||| ||    
T  34301623 taggcatggcaatggggcggggtggggacgggttttaccttccccatccccatacccgattatcatatacttacctgttaccctacccatacccaacggg 34301524  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||| ||| ||| |||||||| ||||| ||||||| |||| |||||||    
T  34301523 gatgagaaattgaatcccatccccgtccccgacgggttcgggtatccccgccccatcccc 34301464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 5858926 - 5858804
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||| ||||||| ||| |||| || |||||  | ||||||||||||||  |||||| |||||||||||||| ||    
T  5858926 taggcatggcaatggggcggggtggggacaggttttacattccccgtccccatacctgattctcatatacttacccgttaccttacccatattcaacggg 5858827  T
Q  242 gatgagaaagcgaatctcatccc 264  Q
    |||||||||  ||| ||||||||    
T  5858826 gatgagaaattgaacctcatccc 5858804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 27058799 - 27058677
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||| | |||| || |||| ||| ||||||||||||||  |||||||||||||||| |||| ||    
T  27058799 taggcatggcaatggggcggggtggggacgggttttacctcccccgtccccatactctattctcatatacttacccgttaccctacccatatccaacggg 27058700  T
Q  242 gatgagaaagcgaatctcatccc 264  Q
    | |||||||  ||||||||||||    
T  27058699 ggtgagaaatagaatctcatccc 27058677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 151 - 300
Target Start/End: Original strand, 34776090 - 34776240
Alignment:
Q  151 caatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| | ||||||||||  ||||||||||| || |  | |||||| | ||||||||| ||||  |||| ||||||||||| |||| |||||||||||    
T  34776090 caatggggcgggatggggacgggttttaccttccccatctccatacccgattctcatatatttacctgttaacctacccatatccaacggggatgagaaa 34776189  T
Q  251 gcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
      ||||||||| ||| ||||| || ||||| | ||||| ||||||||||||    
T  34776190 ttgaatctcatccccgtccccaacgggttcggatatccccgcctcatcccc 34776240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 39446009 - 39445872
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    ||||||| ||||||||||||||||| || |||||  | ||||||||||||||  |||||||||||||||   ||   ||||||||||  ||||||||| |    
T  39446009 tggggacgagttttaccttctccgtccccatacctgattctcatatacttacccgttaccctacccatacctaatgaggatgagaaattgaatctcatcc 39445910  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    || |||||||| ||||| ||||||| | || |||||||    
T  39445909 ccgtccccgacgggttcgggtatccccaccccatcccc 39445872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 164 - 299
Target Start/End: Complemental strand, 4231166 - 4231030
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  |||||||||||||||| || |||||| | ||||||||| |||   |||||||||||||||  |||| ||||| | |||  ||||||||| |    
T  4231166 tggggacgggttttaccttctccgtccccatacccgattctcatataattatccgttaccctacccatacccaacggggataataaattgaatctcatcc 4231067  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatccc 299  Q
    ||||||| ||| ||||| ||||||| |||| ||||||    
T  4231066 ccatcccagacgggttcgggtatccccgccccatccc 4231030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 492 - 540
Target Start/End: Original strand, 17108314 - 17108362
Alignment:
Q  492 atttagggtttgagtttctatttatataaaatggataataaactgattt 540  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  17108314 atttagggtttaagtttctatttatataaaatggataataaattgattt 17108362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 176 - 301
Target Start/End: Original strand, 1063162 - 1063288
Alignment:
Q  176 ttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgact 274  Q
    |||||||| | || || |||||| | ||||||||||||||  ||||||||||| |||  |||| |||||||||||  ||||||||| |||||||||||      
T  1063162 ttaccttccctgtccccatacccgattctcatatacttacccgttaccctacctatacccaacggggatgagaaattgaatctcatccccatccccgatg 1063261  T
Q  275 ggttcaggtatcctcgcctcatccccc 301  Q
    ||||| ||||||| | || ||||||||    
T  1063262 ggttcgggtatccccaccccatccccc 1063288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 152 - 301
Target Start/End: Complemental strand, 30481875 - 30481725
Alignment:
Q  152 aatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaag 251  Q
    |||||| |||| |||||||  |||| |||||| |||| |  |||||||||| ||| |||||||   |||| | ||||||||| ||| ||||||||||||     
T  30481875 aatggggcagggtggggacgggtttcaccttccccgtcctcataccctactttcaaatacttatccgttatcttacccatatccaaaagggatgagaaat 30481776  T
Q  252 cgaatctcat-cccatccccgactggttcaggtatcctcgcctcatccccc 301  Q
     ||||| ||| ||||||||| |  |||||| ||||||||||| ||||||||    
T  30481775 tgaatcacatccccatcccctaagggttcatgtatcctcgccccatccccc 30481725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 24870441 - 24870370
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||| | ||||||||||||||  |||||||||||||||  |||| |||||||||||  ||||||||||||    
T  24870441 atacccgattctcatatacttacccgttaccctacccatacccaacggggatgagaaattgaatctcatccc 24870370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 28977583 - 28977424
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  |||||| |||| | || || |||||| | ||| ||||||||||  |||||||||||||||  |||| ||    
T  28977583 taggcatggcaatggggcggggtggggacgtgttttatcttccctgtccccatacccgattcttatatacttacctgttaccctacccatacccaacggg 28977484  T
Q  242 gatgagaaagcgaatctcatcc-catccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||| ||||| | ||||| || ||||| ||||||| |||| |||||||    
T  28977483 gatgagaaattgaatcacatccacgtccccaacgggttcgggtatccccgccccatcccc 28977424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 286
Target Start/End: Complemental strand, 36132322 - 36132239
Alignment:
Q  204 tcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc-catccccgactggttcaggtatc 286  Q
    ||||||||||| | |||| | ||| |||||||||| |||||||||||  ||||||||||| |||||||||| ||||| ||||||    
T  36132322 tcatatacttattcgttatcttacacatattcaacggggatgagaaattgaatctcatccacatccccgacaggttcgggtatc 36132239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 11255414 - 11255328
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    |||||||||||||   ||||||||| ||||| ||||| |||||||||||  ||||||||| ||| |||||||| ||||| |||||||    
T  11255414 tctcatatacttatccgttaccctatccatactcaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtatcc 11255328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 540
Target Start/End: Original strand, 29918467 - 29918593
Alignment:
Q  414 tatggaacgagaagagataaaactttgagaagtgagtgtcatctaagaaattgagactatgattgtgttcgaggaacgatttagggtttgagtttctatt 513  Q
    ||||||| | ||| ||||| |||| ||| || | |||||||||| | | ||||||||| | | |||||  | | || |||||||||||||||||||||||    
T  29918467 tatggaaggcgaaaagatagaactatgataactaagtgtcatctgaaagattgagactctaactgtgtgagtgaaatgatttagggtttgagtttctatt 29918566  T
Q  514 tatataaaatggataataaactgattt 540  Q
    |||||||||  | ||||||| ||||||    
T  29918567 tatataaaagaggtaataaattgattt 29918593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 264
Target Start/End: Complemental strand, 40248811 - 40248689
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| |||| |||||||  |||||||||| ||||| |  ||| || | |||||||||||||   |||| ||||||||||| ||||  |    
T  40248811 taggcatggcaatggggcagggtggggacgggttttaccttttccgtcctcatatccgattctcatatacttatccgttatcctacccatatccaacgag 40248712  T
Q  242 gatgagaaagcgaatctcatccc 264  Q
    |||||||||  ||||||||||||    
T  40248711 gatgagaaattgaatctcatccc 40248689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 540
Target Start/End: Original strand, 5793522 - 5793571
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactgattt 540  Q
    ||||||||||||||||||||||||||||||||  |||||| || ||||||    
T  5793522 gatttagggtttgagtttctatttatataaaaatgataattaattgattt 5793571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 540
Target Start/End: Complemental strand, 6388656 - 6388607
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactgattt 540  Q
    ||||||||||||| |||||| |||||||||||||| ||||||| ||||||    
T  6388656 gatttagggtttgggtttctgtttatataaaatgggtaataaattgattt 6388607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 14185962 - 14186071
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||| | || ||||||| |||||||| ||| |||| || |||||| | ||||||||||||||  |||||||||| ||||   ||| |    
T  14185962 ctaggcatggcaatggggcggggtggggacgagttttacattccccgtccccatacccaattctcatatacttacccgttaccctacacatacctaacgg 14186061  T
Q  241 ggatgagaaa 250  Q
    ||||||||||    
T  14186062 ggatgagaaa 14186071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 15069023 - 15068958
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat 261  Q
    |||||||| |||||||||||  |||||||||||||||  |||| |||||||||||  |||||||||    
T  15069023 ccctactcccatatacttacctgttaccctacccatacccaacggggatgagaaattgaatctcat 15068958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 27932114 - 27932175
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    ||||||||||||||  |||||||||||||||| ||| ||||||||||||  ||||| |||||    
T  27932114 tctcatatacttacccgttaccctacccatatccaatagggatgagaaattgaatcacatcc 27932175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 250
Target Start/End: Original strand, 28345082 - 28345158
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||||||| |||| ||||||||||||||||  |||||||   |||||||||||||||  |||| |||||||||||    
T  28345082 gttttaccttc-ccgtccctataccctactctcgaatacttatccgttaccctacccatacccaacggggatgagaaa 28345158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 279
Target Start/End: Complemental strand, 9642814 - 9642698
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  ||||||||||| || | || |||| ||| ||||||||||||||  |||| ||||||||||| |||  ||||||||||| |||| | ||| |    
T  9642814 tggggacgggttttaccttccccatccccatactctattctcatatacttacccgttatcctacccatatccaatggggatgagaaatcgaaccccatac 9642715  T
Q  263 ccatccccgactggttc 279  Q
    || |||||||| |||||    
T  9642714 ccgtccccgacgggttc 9642698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 15174284 - 15174220
Alignment:
Q  200 actctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||| |||||||||||  ||||||||||||||||||||  |||||||||||  |||||| |||||    
T  15174284 actcccatatacttacctgttaccctacccatattcaatggggatgagaaattgaatcttatccc 15174220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 2190288 - 2190229
Alignment:
Q  205 catatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    ||||||||||   |||||||||||||||| |||| |||||||||||  ||||||||||||    
T  2190288 catatacttatccgttaccctacccatatccaacggggatgagaaattgaatctcatccc 2190229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 29109255 - 29109128
Alignment:
Q  174 ttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccga 272  Q
    |||||||||| ||||||| |||| | | ||||||||| ||||  |||||||||||||||   ||  || ||||||||  ||||||||| ||| || ||||    
T  29109255 ttttaccttccccgttcccatactcgattctcatatatttacccgttaccctacccatacctaatgggtatgagaaattgaatctcatccccgtctccga 29109156  T
Q  273 ctggttcaggtatcctcgcctcatcccc 300  Q
    | ||||| ||||||| |||| |||||||    
T  29109155 cgggttctggtatccccgccccatcccc 29109128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 14687128 - 14687174
Alignment:
Q  218 gttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    ||||||||| ||||| ||| ||||||||||||| |||||||||||||    
T  14687128 gttaccctatccatactcagcagggatgagaaatcgaatctcatccc 14687174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 18151096 - 18151165
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatat 233  Q
    ||||||| | |||||||||| | || || |||||||||||||||||||||||  |||| |||| ||||||    
T  18151096 tggggacgaattttaccttccctgtccccataccctactctcatatacttacctgttagcctatccatat 18151165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 591
Target Start/End: Original strand, 30903983 - 30904084
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactga-tttgtacattcgaaacaggtttttgtatgagtttgaggtgggtacttatatc 589  Q
    |||||| |||||  ||||||||||||||||||||  ||||||| ||| ||| ||||||||  || | |||  ||||| || || ||||||||||||||||    
T  30903983 gatttaaggttttggtttctatttatataaaatgtgtaataaattgattttctacattcgggactgatttgggtatgggtatggggtgggtacttatatc 30904082  T
Q  590 tc 591  Q
    ||    
T  30904083 tc 30904084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 533
Target Start/End: Complemental strand, 11880907 - 11880867
Alignment:
Q  493 tttagggtttgagtttctatttatataaaatggataataaa 533  Q
    |||||||||||||||||||||||||||| | || |||||||    
T  11880907 tttagggtttgagtttctatttatataagaggggtaataaa 11880867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 533
Target Start/End: Complemental strand, 11898323 - 11898283
Alignment:
Q  493 tttagggtttgagtttctatttatataaaatggataataaa 533  Q
    |||||||||||||||||||||||||||| | || |||||||    
T  11898323 tttagggtttgagtttctatttatataagaggggtaataaa 11898283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 264
Target Start/End: Complemental strand, 17084617 - 17084517
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    |||||||  ||||||||||| || | || ||||||||||||||| || ||||  ||||||| |||||||  ||   ||||||||||| ||||| ||||||    
T  17084617 tggggacgggttttaccttccccatccccataccctactctcatttatttacatgttacccaacccatacccattggggatgagaaatcgaatttcatcc 17084518  T
Q  264 c 264  Q
    |    
T  17084517 c 17084517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 193 - 300
Target Start/End: Original strand, 20399306 - 20399414
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgc 291  Q
    |||||| | ||||||||||||||   ||||| ||||||||  ||||||||||||||||  ||| | ||| ||| |||||||| ||||| | |||||  ||    
T  20399306 atacccaattctcatatacttacctattaccttacccatacccaacagggatgagaaattgaaccccatccccgtccccgacgggttcggttatccctgc 20399405  T
Q  292 ctcatcccc 300  Q
    |||||||||    
T  20399406 ctcatcccc 20399414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 34021134 - 34021242
Alignment:
Q  181 ttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatcccc-gactggtt 278  Q
    |||||||| |||||| || | | |||||||||||   |||||||||| ||||| |||| |||||||||||  ||| ||||| ||| ||||| ||| ||||    
T  34021134 ttctccgtccctatatccgattatcatatacttatccgttaccctactcatatccaacggggatgagaaattgaacctcatccccgtccccggacgggtt 34021233  T
Q  279 caggtatcc 287  Q
    |||||||||    
T  34021234 caggtatcc 34021242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 142 - 287
Target Start/End: Complemental strand, 17853749 - 17853604
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| |||| |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||  |||| ||    
T  17853749 taggcatggcaatgggtcagggtggggacgggttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacccatacccaac-gg 17853651  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    |||||||||  ||||||||| ||| |||||||| ||||| |||||||    
T  17853650 gatgagaaattgaatctcatccccgtccccgacgggttcgggtatcc 17853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 22695363 - 22695212
Alignment:
Q  150 acaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaa 249  Q
    |||||||| | || |||||||  ||||||||||| |||| ||||||||| | ||||||||||||||| |||||||||||||||  |||  ||||||||||    
T  22695363 acaatggggcggggtggggacgggttttaccttccccgtccctatacccaattctcatatacttactcgttaccctacccatacccaatggggatgagaa 22695264  T
Q  250 agcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |  ||||| ||| ||| |  ||||| ||||| ||||||| |||| |||||||    
T  22695263 attgaatcccatccccgtttccgacgggttcgggtatccccgccccatcccc 22695212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 173 - 299
Target Start/End: Original strand, 40517457 - 40517584
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccg 271  Q
    ||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||  |||| |||||||||||  ||||||||| ||| ||||||    
T  40517457 gttttaccttccccgtccccatacccgattctcatatacttacctgttaccctacccatacccaacggggatgagaaattgaatctcatccccgtccccg 40517556  T
Q  272 actggttcaggtatcctcgcctcatccc 299  Q
     | ||||| ||||||| |||| ||||||    
T  40517557 gcgggttcgggtatccccgccccatccc 40517584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 151 - 264
Target Start/End: Complemental strand, 3565179 - 3565067
Alignment:
Q  151 caatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||| | || |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||||||| |||| |||||||||||    
T  3565179 caatggggcggggtggggacgggttttaccttc-ccgtccccatacccgattctcatatacttacccgttaccctacccatatccaacggggatgagaaa 3565081  T
Q  251 gcgaatctcatccc 264  Q
      ||||||||||||    
T  3565080 ttgaatctcatccc 3565067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 300
Target Start/End: Complemental strand, 5909121 - 5908993
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccg 271  Q
    ||||||||||| |||| || |||||| | ||||||||||||||  |||||||||||| ||  |||| |||||||||||  ||||||||| ||| ||||||    
T  5909121 gttttaccttccccgtccccatacccgattctcatatacttacccgttaccctacccgtacccaacggggatgagaaattgaatctcatccccgtccccg 5909022  T
Q  272 actggttcaggtatcctcgcctcatcccc 300  Q
    || ||||| ||||||| | || |||||||    
T  5909021 acgggttcgggtatcccctccccatcccc 5908993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 6093524 - 6093416
Alignment:
Q  193 ataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgc 291  Q
    |||||| | ||||||||||||||| |||||||||||||||| |||| |||||||||||  |||||  || ||| |||||||| ||||| | ||||| |||    
T  6093524 atacccgattctcatatacttacttgttaccctacccatatccaacggggatgagaaattgaatcctatccccgtccccgacgggttcggatatccccgc 6093425  T
Q  292 ctcatcccc 300  Q
    |||||||||    
T  6093424 ctcatcccc 6093416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 34258902 - 34258956
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  34258902 ccctactctcatatacttacttgttaccctacccatattcaacgaggatgagaaa 34258956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 164 - 287
Target Start/End: Complemental strand, 6156358 - 6156234
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc- 262  Q
    |||||||||||||||||||| |||| || ||||||   ||| ||||||||||  |||||||||||||||| ||||  ||||||||||  || |  ||||     
T  6156358 tggggacaagttttaccttccccgtccccatacccgtttcttatatacttacccgttaccctacccatatccaacgaggatgagaaattgagttccatct 6156259  T
Q  263 ccatccccgactggttcaggtatcc 287  Q
    ||||||||||| ||||| |||||||    
T  6156258 ccatccccgacgggttcgggtatcc 6156234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 6369312 - 6369471
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    |||||||| | |||||| | || ||||||| || |||||||| |||||||  |||| | | ||||||||||||||  |||||||||||||||| |||| |    
T  6369312 ctaggcatgataatggggcggggtggggacgagctttaccttttccgttctcatactcgattctcatatacttacccgttaccctacccatatccaac-g 6369410  T
Q  241 ggatgagaaagcgaatctcatccca-tccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||||   |||||||||||  | || ||  ||||| ||||||| ||||||||||||    
T  6369411 ggatgagaaattaaatctcatccccgttcctgatgggttcgggtatccccgcctcatcccc 6369471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 18452366 - 18452294
Alignment:
Q  193 ataccctactctcatatacttactagtta-ccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||||||||||||||||||| |||| |||||||||||  || ||||||||||||| |||||| ||||||    
T  18452366 ataccctactctcatatacttacttgttacccctacccatacccagcagggatgagaaaccgaatcccatccc 18452294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 15889830 - 15889989
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  ||||||||||| || | || ||| || | ||||||||||||||  |||||||||||||||   ||| ||    
T  15889830 taggcatggcaatggggcggggtggggacgggttttaccttccccatccccataaccgattctcatatacttacctgttaccctacccatacctaacggg 15889929  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||||||  ||||||||| ||| |||||||| ||||| |||||||  ||| |||||||    
T  15889930 gatgagaaattgaatctcatccccgtccccgacgggttcgggtatccctgccccatcccc 15889989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 30996217 - 30996338
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||  |||||||||||||||| |  |||||| | ||||||||| ||||  |||||| |||| ||||||||| ||    
T  30996217 taggcatggcaatggggcggggtggggacgggttttaccttctccgtcctcatacccgattctcatatatttacctgttaccttacctatattcaac-gg 30996315  T
Q  242 gatgagaaagcgaatctcatccc 264  Q
    |||||||||  ||||||||||||    
T  30996316 gatgagaaattgaatctcatccc 30996338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 38972506 - 38972572
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctaccca 230  Q
    ||||||| |||||||||||| |||| || ||||||||||| ||||||| |||| |||||||||||||    
T  38972506 tggggacgagttttaccttccccgtccccataccctactcccatatacatactcgttaccctaccca 38972572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 4920465 - 4920602
Alignment:
Q  156 ggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaa 255  Q
    |||| ||||||||||  ||||||||||| |  | ||||||||| | | ||||||||||||  |||||||||||||||  ||||  ||||||||||  |||    
T  4920465 ggacgggatggggacgggttttaccttccctatccctatacccgattatcatatacttacccgttaccctacccatacccaacgaggatgagaaaatgaa 4920564  T
Q  256 tctcat-cccatccccgactggttcaggtatcctcgcc 292  Q
    || ||| ||| |||||||| ||||| ||||||| ||||    
T  4920565 tcccatccccgtccccgacgggttcgggtatccccgcc 4920602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 298
Target Start/End: Original strand, 10126725 - 10126884
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatatt--caac 238  Q
    |||||||| |||||||| | || ||||||| |||||||||| | |||||   |||||| | ||||||||||||||  ||||| ||||| ||||   ||||    
T  10126725 ctaggcatgacaatggggcggggtggggacgagttttacctcc-ccgttttcatacccgattctcatatacttacccgttactctacctatatatccaac 10126823  T
Q  239 agggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcc 298  Q
    ||||||||||||  ||||||||| ||| || ||||| ||||  ||||||| ||||||||||    
T  10126824 agggatgagaaattgaatctcatccccgtctccgacgggtttgggtatccccgcctcatcc 10126884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 20973933 - 20973796
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    |||||||  ||||||||||| |||| || ||| |  | ||| ||||||||||  |||||||||||||||| |||| |||||||||||  ||||||||| |    
T  20973933 tggggacgggttttaccttccccgtccccataactgattcttatatacttacctgttaccctacccatatccaacggggatgagaaattgaatctcatcc 20973834  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    || | |||||| ||||| |||||||  ||| |||||||    
T  20973833 ccgtacccgacgggttcgggtatccctgccccatcccc 20973796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 23045429 - 23045361
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||| |||||||||||  |||||||||||||||| |||| |||||||||||  ||||| ||||||    
T  23045429 ccctactcccatatacttacccgttaccctacccatatccaacggggatgagaaattgaatcccatccc 23045361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 33862659 - 33862493
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacc-------catatt 234  Q
    ||||||| |||||| | | || |||||||  ||||||| ||| |||| || |||||| | |||||||||| |||| |||||||||||       ||||||    
T  33862659 taggcatgacaatgaggcggggtggggacgggttttacattccccgtccccatacccgattctcatatacatactcgttaccctaccgcctacccatatt 33862560  T
Q  235 caacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||| |||||||||||  ||| ||||| ||| |||||||| ||||| ||||||| |||| |||||||    
T  33862559 caacggggatgagaaattgaacctcatccccgtccccgacgggttcgggtatccccgccccatcccc 33862493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 550
Target Start/End: Original strand, 35584054 - 35584113
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactga-tttgtacattcga 550  Q
    |||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||    
T  35584054 gatttagggtttgagtttctatttatataaaa-gggtaataaattgattttgtacattcga 35584113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 42718035 - 42717987
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||||||    
T  42718035 tctcatatatttacttgttaccctacccatattcaacggggatgagaaa 42717987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 589
Target Start/End: Complemental strand, 16311444 - 16311346
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactga-tttgtacattcgaaacaggtttttgtatgagtttgaggtgggtacttatatc 589  Q
    ||||||||||||| |||||||||||||||||| |||||||||| ||| |||  |||||||| ||||||||   |||| ||| | ||||||||| ||||||    
T  16311444 gatttagggtttg-gtttctatttatataaaagggataataaattgattttcaacattcgagacaggtttgaatatgggttcggggtgggtacctatatc 16311346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 202 - 300
Target Start/End: Original strand, 28045331 - 28045430
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctca-tcccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    ||||||||||||||  ||||||||||||||| ||||| |||||||||||  |||| ||| || | |||||||| ||||| ||||||| | || |||||||    
T  28045331 tctcatatacttacctgttaccctacccatactcaacggggatgagaaattgaatttcattctcgtccccgacgggttcgggtatccccaccacatcccc 28045430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 589
Target Start/End: Original strand, 29664908 - 29665007
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactga-tttgtacattcgaaacaggtttttgtatgagtttgaggtgggtacttatatc 589  Q
    ||||||| ||||||||||||||||| |||||| || || |||| ||| ||||||||||||  || |||||  ||||||||| || |||||||| ||||||    
T  29664908 gatttagagtttgagtttctatttaaataaaaggggtagtaaattgattttgtacattcgggacgggtttgggtatgagttcgaagtgggtacctatatc 29665007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 176 - 298
Target Start/End: Complemental strand, 42987913 - 42987790
Alignment:
Q  176 ttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgact 274  Q
    |||||||| |||| || |||||| | |||| |||||||||  ||||| |||| ||||| |||| || ||||||||  ||||||||| ||| | ||||||     
T  42987913 ttaccttccccgtccccatacccgattctcgtatacttacccgttacgctactcatatccaacgggaatgagaaattgaatctcatccccgttcccgacg 42987814  T
Q  275 ggttcaggtatcctcgcctcatcc 298  Q
    ||||| |||||||||||| |||||    
T  42987813 ggttcgggtatcctcgccccatcc 42987790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 262
Target Start/End: Original strand, 1218428 - 1218526
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc 262  Q
    |||||||  ||||||||||| |||| || |||||| | ||||||||||||||  |||||| ||| ||||  |||| |||||||||||  ||||||||||    
T  1218428 tggggacgggttttaccttccccgtccccatacccgattctcatatacttacccgttaccttactcatacccaacggggatgagaaattgaatctcatc 1218526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 12712949 - 12712875
Alignment:
Q  189 tcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    |||||| |||||||| |||||||||||  |||||||||||||||| | || ||||| |||||  |||||||||||    
T  12712949 tcctatcccctactcccatatacttacccgttaccctacccatatccgacggggataagaaattgaatctcatcc 12712875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 270
Target Start/End: Original strand, 12235833 - 12235930
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcccatcccc 270  Q
    ||||| ||||| || | ||||| |||||||| |||||| ||||  |||||||||||||||| |||  ||||||| |||  |||||||||||| |||||    
T  12235833 gttttgccttccccatccctatcccctactcccatatatttacccgttaccctacccatatccaaaggggatgaaaaattgaatctcatcccctcccc 12235930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 29664619 - 29664687
Alignment:
Q  230 atattcaacagggatgagaaagcgaatctcatcc-catccccgactggttcaggtatcctcgcctcatc 297  Q
    ||||||||||| ||||||||| |||||| ||||| | || ||||| |||||||||||||||| ||||||    
T  29664619 atattcaacagagatgagaaatcgaatcacatcctcgtctccgacgggttcaggtatcctcgactcatc 29664687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 36579661 - 36579601
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc 262  Q
    ||||||||||||||  |||||||||||||||  |||| |||||||||||  ||||||||||    
T  36579661 tctcatatacttacatgttaccctacccatacccaacggggatgagaaattgaatctcatc 36579601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 12835015 - 12834888
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatc-ccatccccg 271  Q
    |||||||||| |||||| |||||| | | |||||||||||||   |||| |||| |||||  ||||  ||||||||||  |||||||||| || ||||||    
T  12835015 gttttaccttttccgtttctatactcgattctcatatacttatccgttatcctatccatacccaacgtggatgagaaattgaatctcatctccgtccccg 12834916  T
Q  272 actggttcaggtatcctcgcctcatccc 299  Q
    |  ||||| ||||||| |||| ||||||    
T  12834915 atgggttcgggtatccccgccccatccc 12834888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 250
Target Start/End: Complemental strand, 38006918 - 38006832
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    |||||||  ||||||| ||| ||||||| |||||| | ||| |||||||||   |||||||||||||||  |||| |||||||||||    
T  38006918 tggggacgggttttacattccccgttcccatacccgattcttatatacttatccgttaccctacccatacccaacggggatgagaaa 38006832  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 2984832 - 2984889
Alignment:
Q  206 atatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc 263  Q
    ||||||||||  |||||||||| |||||||||| |||||||||||  ||||| |||||    
T  2984832 atatacttacctgttaccctactcatattcaacggggatgagaaattgaatcccatcc 2984889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 300
Target Start/End: Complemental strand, 8453818 - 8453682
Alignment:
Q  167 ggacaagttttaccttctccgttcc--tataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cc 263  Q
    |||| |||||||||||| |||||||  ||||   | |||||||||||||||| ||||| |||||||||  |||  | ||||| |||  ||||||||| ||    
T  8453818 ggacgagttttaccttccccgttcccatatatgattctctcatatacttactcgttactctacccatacccaatggagatgataaaatgaatctcatccc 8453719  T
Q  264 catccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||| ||| ||||| ||||||| | || |||||||    
T  8453718 catccctgacaggttcgggtatccccaccacatcccc 8453682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 24207290 - 24207347
Alignment:
Q  173 gttttaccttctccgttcctataccctactctcatatacttactagttaccctaccca 230  Q
    |||||||||||  | | || ||| |||||||||||||||||||| |||||||||||||    
T  24207290 gttttaccttcctcatccccatatcctactctcatatacttactcgttaccctaccca 24207347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 540
Target Start/End: Original strand, 38972859 - 38972908
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaactgattt 540  Q
    |||||||||||| |||||| |||||||||||| || ||||||| ||||||    
T  38972859 gatttagggtttcagtttcgatttatataaaagggttaataaattgattt 38972908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 12457126 - 12457198
Alignment:
Q  193 ataccctactctcatatacttactagttaccctaccc-atattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||| |||||||||| |||| |||||||||||| ||| || || || |||||||| |||||| ||||||    
T  12457126 ataccctattctcatatacatacttgttaccctacccaatactcgacgggtatgagaaatcgaatcgcatccc 12457198  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 12774213 - 12774101
Alignment:
Q  189 tcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcc-catccccgactggttcaggtatcc 287  Q
    |||||| || ||||| |||||||||||  |||||||||||||||  | || ||||| |||||  ||||||||||| | ||||| |  ||||| ||||| |    
T  12774213 tcctatcccttactcccatatacttacccgttaccctacccatacccgacggggataagaaattgaatctcatcctcgtccccaatgggttcgggtattc 12774114  T
Q  288 tcgcctcatcccc 300  Q
     ||||||||||||    
T  12774113 ccgcctcatcccc 12774101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 12915125 - 12915177
Alignment:
Q  198 ctactctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||||||||||||||  ||||||||| |||||| |||| |||||| ||||    
T  12915125 ctactctcatatacttacccgttaccctatccatatccaacggggatgcgaaa 12915177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 287
Target Start/End: Complemental strand, 35194385 - 35194301
Alignment:
Q  204 tcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    ||||||||||||  ||||||||||||||||||||| | ||| |||||  ||| | ||| |||||||||||| ||||  |||||||    
T  35194385 tcatatacttacctgttaccctacccatattcaacggagataagaaattgaaccacatccccatccccgacgggtttgggtatcc 35194301  T

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Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 35311435 - 35311595
Alignment:
Q  141 ctaggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacag 240  Q
    ||||||||  ||||||||| || || ||||   ||||||||||||| | || ||| || | ||||||||||||||  |||| |||||  |||| |||| |    
T  35311435 ctaggcatggcaatgggacggggtgcggacggattttaccttctccatccccatatccgattctcatatacttacccgttatcctacatatatccaacgg 35311534  T
Q  241 ggatgagaaagcgaatctcatc-ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    |||||| |||  ||||| |||| ||||||||||| | ||| ||||||| | || |||||||    
T  35311535 ggatgaaaaattgaatcccatctccatccccgacggattcgggtatccccaccccatcccc 35311595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 56334 - 56266
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||| |||||||||||  |||||||||||||||| ||||||||||||||||  ||||||||||||    
T  56334 ccctactcccatatacttacccgttaccctacccatatccaacagggatgagaaattgaatctcatccc 56266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 32971 - 32834
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-c 262  Q
    ||||||| ||||||||||||||||| || |||||  | ||||||||||||||  |||||||||||||||   ||   ||||||||||  ||||||||| |    
T  32971 tggggacgagttttaccttctccgtccccatacctgattctcatatacttacccgttaccctacccatacctaatgaggatgagaaattgaatctcatcc 32872  T
Q  263 ccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
    || |||||||| ||||| ||||||| | || |||||||    
T  32871 ccgtccccgacgggttcgggtatccccaccccatcccc 32834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 14456 - 14504
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaa 250  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  14456 tctcatatacttacttgttaccctacccatattcaacggggatgagaaa 14504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 300
Target Start/End: Original strand, 3909 - 4036
Alignment:
Q  174 ttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccga 272  Q
    ||||||||||||||| || |||||| | ||||||||| |||||  ||||||||||||||  |||| |||||||||||  ||||| ||| ||| |||||||    
T  3909 ttttaccttctccgtccccatacccgattctcatatatttacttattaccctacccatacccaacggggatgagaaattgaatcacatccccgtccccga 4008  T
Q  273 ctggttcaggtatcctcgcctcatcccc 300  Q
      ||||| |||| || |||| |||||||    
T  4009 tgggttcgggtacccccgccccatcccc 4036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 33014 - 33173
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagg 241  Q
    |||||||  ||||||| | || |||||||| ||||||| ||| |||| || |||||  | ||||||||||||||  |||||||||||||||  |||| ||    
T  33014 taggcatggcaatggggcggggtggggacaggttttacattccccgtccccatacctgattctcatatacttacccgttaccctacccatacccaacggg 33113  T
Q  242 gatgagaaagcgaatctcat-cccatccccgactggttcaggtatcctcgcctcatcccc 300  Q
     ||||||||  ||||||||| ||| |||||||| | ||| ||||||| | || |||||||    
T  33114 aatgagaaattgaatctcatccccgtccccgacggattcgggtatccccaccacatcccc 33173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 299
Target Start/End: Original strand, 90235 - 90374
Alignment:
Q  161 ggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctca 260  Q
    ||||||||||  ||||||| ||||||||    |||||  | ||||||||||||||  ||||||||| |||||  ||||||||||||||||  ||| ||||    
T  90235 ggatggggacgggttttacattctccgtcagcatacctgattctcatatacttacccgttaccctatccatacccaacagggatgagaaattgaacctca 90334  T
Q  261 t-cccatccccgactggttcaggtatcctcgcctcatccc 299  Q
    | ||| |||||||| ||||  |||||||||||| ||||||    
T  90335 tccccgtccccgacgggtttgggtatcctcgccccatccc 90374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 5112 - 5022
Alignment:
Q  142 taggcattacaatgggacaggatggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccata 232  Q
    ||||||| |||||||| | || |||| || || |||| |||| | ||||| |||||||||||||||||||||||| |||||||||| ||||    
T  5112 taggcatcacaatggggcggggtgggaacgagatttatcttccctgttcccataccctactctcatatacttactcgttaccctactcata 5022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 14581 - 14455
Alignment:
Q  174 ttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatcccatccccgac 273  Q
    |||||| ||| |||| || |||||| | ||||||||||||||  |||||||||||||||  ||||||||||||||||  ||| | |||| |   ||||||    
T  14581 ttttacattccccgtccccatacccgattctcatatacttacctgttaccctacccatacccaacagggatgagaaattgaaccccatctccgtcccgac 14482  T
Q  274 tggttcaggtatcctcgcctcatcccc 300  Q
     ||||| ||||||| |||| |||||||    
T  14481 gggttcgggtatccccgccccatcccc 14455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 9981 - 10067
Alignment:
Q  202 tctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat-cccatccccgactggttcaggtatcc 287  Q
    |||||||||||||   ||||||||| ||||| ||||| |||||||||||  ||||||||| ||| |||||||| ||||| |||||||    
T  9981 tctcatatacttatccgttaccctatccatactcaacggggatgagaaattgaatctcatccccgtccccgacgggttcgggtatcc 10067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 264
Target Start/End: Original strand, 67377 - 67467
Alignment:
Q  174 ttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||| ||||| |||| || || |||||||  |||||| ||||  ||||||||||||||||||||  |||||||||||  ||||||||||||    
T  67377 ttttgccttccccgtccccatcccctactgccatatatttacctgttaccctacccatattcaatggggatgagaaattgaatctcatccc 67467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 264
Target Start/End: Original strand, 75220 - 75310
Alignment:
Q  174 ttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||| ||||| |||| || || |||||||  |||||| ||||  ||||||||||||||||||||  |||||||||||  ||||||||||||    
T  75220 ttttgccttccccgtccccatcccctactgccatatatttacctgttaccctacccatattcaatggggatgagaaattgaatctcatccc 75310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 199240 - 199155
Alignment:
Q  164 tggggacaagttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaa 249  Q
    |||||||  ||||||| ||| |||| || |||||  | |||||||||||||| |||||||||||||||| ||||  ||||||||||    
T  199240 tggggacgggttttacattccccgtccccataccagattctcatatacttaccagttaccctacccatactcaaaggggatgagaa 199155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold1322
Description:

Target: scaffold1322; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 533
Target Start/End: Original strand, 1048 - 1090
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaa 533  Q
    |||||| | |||||||||||||||||||||||||| |||||||    
T  1048 gatttaagatttgagtttctatttatataaaatgggtaataaa 1090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1322; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 261
Target Start/End: Original strand, 700 - 789
Alignment:
Q  172 agttttaccttctccgttcctataccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcat 261  Q
    ||||| ||||||||||| || ||| ||||| || || || ||||  ||||| ||||||||||||||| | |||||||||  |||||||||    
T  700 agtttcaccttctccgtccccatatcctacacttatttatttacccgttacgctacccatattcaacggagatgagaaattgaatctcat 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 533
Target Start/End: Complemental strand, 17606 - 17564
Alignment:
Q  491 gatttagggtttgagtttctatttatataaaatggataataaa 533  Q
    |||||| |||||| ||||||||||||||||||||| |||||||    
T  17606 gatttatggtttgcgtttctatttatataaaatgggtaataaa 17564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 211032 - 211100
Alignment:
Q  196 ccctactctcatatacttactagttaccctacccatattcaacagggatgagaaagcgaatctcatccc 264  Q
    |||||||| | |||||||||  ||||||||||| |||  |||| |||||||||||  ||||||||||||    
T  211032 ccctactcccgtatacttacctgttaccctacctatacccaacggggatgagaaattgaatctcatccc 211100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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