View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0541_low_40 (Length: 233)
Name: NF0541_low_40
Description: NF0541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0541_low_40 |
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Alignment Details
Target: chr2 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45345256 - 45345159
Alignment:
| Q |
1 |
acaggctgcttctttgatgcccatgagactgctccaccagacagtaaaaatacataaccggatgtgcttcttctatcatcaatatctccagtataatc |
98 |
Q |
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| T |
45345256 |
acaggctgcttctttgatgcccatgagactgctccaccagacagtaaaaatacataatcggatgtggtccttctatcatcaatatctccagcataatc |
45345159 |
T |
|
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